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MS003073 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAGAAATTCGGGGGTGGGAGAAGCCCCGTTGGAACTCCATCACTGGGTTGGTCCTTCGTAGTCGTCATCACTTCCCTTCTCGCCGGCGCCTCCATCGTCCACAACATCTACAAACCAAATCTTGTACTC ATGGCTCAGAAATTCGGGGGTGGGAGAAGCCCCGTTGGAACTCCATCACTGGGTTGGTCCTTCGTAGTCGTCATCACTTCCCTTCTCGCCGGCGCCTCCATCGTCCACAACATCTACAAACCAAATCTTGTACTC ATGGCTCAGAAATTCGGGGGTGGGAGAAGCCCCGTTGGAACTCCATCACTGGGTTGGTCCTTCGTAGTCGTCATCACTTCCCTTCTCGCCGGCGCCTCCATCGTCCACAACATCTACAAACCAAATCTTGTACTC MAQKFGGGRSPVGTPSLGWSFVVVITSLLAGASIVHNIYKPNLVL Homology
BLAST of MS003073 vs. NCBI nr
Match: KAG7016236.1 (hypothetical protein SDJN02_21342, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 80.5 bits (197), Expect = 4.1e-12 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of MS003073 vs. NCBI nr
Match: KGN51309.1 (hypothetical protein Csa_009362 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 9.2e-12 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MS003073 vs. NCBI nr
Match: KAA0037665.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK22809.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MS003073 vs. NCBI nr
Match: KAE9604592.1 (hypothetical protein Lalb_Chr11g0073451 [Lupinus albus]) HSP 1 Score: 78.2 bits (191), Expect = 2.0e-11 Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0
BLAST of MS003073 vs. NCBI nr
Match: XP_023514673.1 (uncharacterized protein LOC111778900 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 77.4 bits (189), Expect = 3.5e-11 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0
BLAST of MS003073 vs. ExPASy TrEMBL
Match: A0A0A0KQX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517080 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.4e-12 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MS003073 vs. ExPASy TrEMBL
Match: A0A5A7T878 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00480 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.6e-12 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MS003073 vs. ExPASy TrEMBL
Match: A0A6A4PT41 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr11g0073451 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 9.9e-12 Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0
BLAST of MS003073 vs. ExPASy TrEMBL
Match: A0A4D6NIS6 (Heat shock a protein 1/8 OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g4141 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-11 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
BLAST of MS003073 vs. ExPASy TrEMBL
Match: A0A2G9GIB6 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22435 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.8e-11 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
BLAST of MS003073 vs. TAIR 10
Match: AT4G26055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 9.8e-12 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 0
BLAST of MS003073 vs. TAIR 10
Match: AT5G57080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 1.7e-08 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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