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MS003063 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAATGGCGATGAGGTTCCATTCCCATGAACTAGAGCTGGAGGAGTCCCAAGAAGCTTACACTTGCAATGGATGCAATGAAACAGGGTGTGGGGCACGATACCAATGCCCAGAATCAGAATGCAATTTTTATCTTCACAAAGAGTGCATGTTTCCACAAACCTCGCCAATTTCCCATGAATTCTTCCCCAATTCCACCTTCAAATTCTTCCTAAGCCAACCGAAGGATTCGAAGAATTTGAATTGCAAAAGGATTTGCGACGCTTGCATGCAGCCCATCAGCGGCTTTGTGTACCACTGCCAGAATAAGGACTTGGACCTCCACCCATGCTGCATAAGCCTCAACAAACAGCACAAAATCGGAGACATGGACTTCAATCTCCACAACAAAGTTCGAGGGAAGTGCTTGTCGTGTAACCATAAGAGCATTAATGGCGGCGCCCACGGTGACAATGGATGGTCCTACATGTCGGGATGTGGAAAGTACCATGTTCACGTGGCTTGTCTT AAAGAAATGGCGATGAGGTTCCATTCCCATGAACTAGAGCTGGAGGAGTCCCAAGAAGCTTACACTTGCAATGGATGCAATGAAACAGGGTGTGGGGCACGATACCAATGCCCAGAATCAGAATGCAATTTTTATCTTCACAAAGAGTGCATGTTTCCACAAACCTCGCCAATTTCCCATGAATTCTTCCCCAATTCCACCTTCAAATTCTTCCTAAGCCAACCGAAGGATTCGAAGAATTTGAATTGCAAAAGGATTTGCGACGCTTGCATGCAGCCCATCAGCGGCTTTGTGTACCACTGCCAGAATAAGGACTTGGACCTCCACCCATGCTGCATAAGCCTCAACAAACAGCACAAAATCGGAGACATGGACTTCAATCTCCACAACAAAGTTCGAGGGAAGTGCTTGTCGTGTAACCATAAGAGCATTAATGGCGGCGCCCACGGTGACAATGGATGGTCCTACATGTCGGGATGTGGAAAGTACCATGTTCACGTGGCTTGTCTT AAAGAAATGGCGATGAGGTTCCATTCCCATGAACTAGAGCTGGAGGAGTCCCAAGAAGCTTACACTTGCAATGGATGCAATGAAACAGGGTGTGGGGCACGATACCAATGCCCAGAATCAGAATGCAATTTTTATCTTCACAAAGAGTGCATGTTTCCACAAACCTCGCCAATTTCCCATGAATTCTTCCCCAATTCCACCTTCAAATTCTTCCTAAGCCAACCGAAGGATTCGAAGAATTTGAATTGCAAAAGGATTTGCGACGCTTGCATGCAGCCCATCAGCGGCTTTGTGTACCACTGCCAGAATAAGGACTTGGACCTCCACCCATGCTGCATAAGCCTCAACAAACAGCACAAAATCGGAGACATGGACTTCAATCTCCACAACAAAGTTCGAGGGAAGTGCTTGTCGTGTAACCATAAGAGCATTAATGGCGGCGCCCACGGTGACAATGGATGGTCCTACATGTCGGGATGTGGAAAGTACCATGTTCACGTGGCTTGTCTT KEMAMRFHSHELELEESQEAYTCNGCNETGCGARYQCPESECNFYLHKECMFPQTSPISHEFFPNSTFKFFLSQPKDSKNLNCKRICDACMQPISGFVYHCQNKDLDLHPCCISLNKQHKIGDMDFNLHNKVRGKCLSCNHKSINGGAHGDNGWSYMSGCGKYHVHVACL Homology
BLAST of MS003063 vs. NCBI nr
Match: XP_022133591.1 (uncharacterized protein LOC111006130 [Momordica charantia]) HSP 1 Score: 228.4 bits (581), Expect = 4.6e-56 Identity = 102/152 (67.11%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of MS003063 vs. NCBI nr
Match: XP_022133597.1 (uncharacterized protein LOC111006136 [Momordica charantia]) HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51 Identity = 98/173 (56.65%), Postives = 129/173 (74.57%), Query Frame = 0
BLAST of MS003063 vs. NCBI nr
Match: XP_038891268.1 (uncharacterized protein LOC120080612 [Benincasa hispida]) HSP 1 Score: 207.6 bits (527), Expect = 8.4e-50 Identity = 94/161 (58.39%), Postives = 122/161 (75.78%), Query Frame = 0
BLAST of MS003063 vs. NCBI nr
Match: XP_011656237.1 (uncharacterized protein LOC105435688 [Cucumis sativus] >KGN51305.1 hypothetical protein Csa_008405 [Cucumis sativus]) HSP 1 Score: 204.1 bits (518), Expect = 9.3e-49 Identity = 94/164 (57.32%), Postives = 123/164 (75.00%), Query Frame = 0
BLAST of MS003063 vs. NCBI nr
Match: KAA0037668.1 (uncharacterized protein E6C27_scaffold277G003360 [Cucumis melo var. makuwa] >TYK22811.1 uncharacterized protein E5676_scaffold311G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 201.4 bits (511), Expect = 6.0e-48 Identity = 91/162 (56.17%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of MS003063 vs. ExPASy TrEMBL
Match: A0A6J1BVJ4 (uncharacterized protein LOC111006130 OS=Momordica charantia OX=3673 GN=LOC111006130 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.2e-56 Identity = 102/152 (67.11%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of MS003063 vs. ExPASy TrEMBL
Match: A0A6J1BX53 (uncharacterized protein LOC111006136 OS=Momordica charantia OX=3673 GN=LOC111006136 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 7.4e-52 Identity = 98/173 (56.65%), Postives = 129/173 (74.57%), Query Frame = 0
BLAST of MS003063 vs. ExPASy TrEMBL
Match: A0A0A0KNT1 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G516820 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 4.5e-49 Identity = 94/164 (57.32%), Postives = 123/164 (75.00%), Query Frame = 0
BLAST of MS003063 vs. ExPASy TrEMBL
Match: A0A5A7T4E4 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00540 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48 Identity = 91/162 (56.17%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of MS003063 vs. ExPASy TrEMBL
Match: A0A0A0KS98 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517070 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.5e-47 Identity = 90/162 (55.56%), Postives = 119/162 (73.46%), Query Frame = 0
BLAST of MS003063 vs. TAIR 10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 125.2 bits (313), Expect = 5.1e-29 Identity = 62/164 (37.80%), Postives = 87/164 (53.05%), Query Frame = 0
BLAST of MS003063 vs. TAIR 10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11 Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of MS003063 vs. TAIR 10
Match: AT2G17740.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11 Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of MS003063 vs. TAIR 10
Match: AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of MS003063 vs. TAIR 10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09 Identity = 32/107 (29.91%), Postives = 50/107 (46.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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