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MS003047 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAATGGCGATGAAGTTCCATCCCCATGAACTGGAGCTGGAGGAGTCCCAAGAAGCTTACACTTGCAATGGATGCAATGAAACAGGGTGCGGGCCACGATACCAATGCCCAGAATCAGAATGCAATTTTTATCTTCACAAAGAGTGCATGTTTCCACAAACCTCGCCAATTTCCCACGAATTCTTCCCCAATTCCACCTTCAAATTCTTCATAAGCCAACCAAAGGCCTGTCACGAAGATTGCAAAAGGATTTGTGACGCTTGCATGCAGCCCATCAGCGGCTTTGTGTACCACTGCCAGAATAAGGACTTGGACCTCCACCCTTGCTGCATAAGCCTCAACAAACAGCACAAAATCGGAGACATGGACTTCAATCTCCACAACAAAGTTCGAGGGAAGTGCTTGTCGTGTAACCATAAGAGCATTAATGGCCGCGCCCACGGCAACAATGGATGGTCCTACATGTCGGGGTGTGGAAAGTACTATGTTCACGTGGCTTGTCTC AAAGAAATGGCGATGAAGTTCCATCCCCATGAACTGGAGCTGGAGGAGTCCCAAGAAGCTTACACTTGCAATGGATGCAATGAAACAGGGTGCGGGCCACGATACCAATGCCCAGAATCAGAATGCAATTTTTATCTTCACAAAGAGTGCATGTTTCCACAAACCTCGCCAATTTCCCACGAATTCTTCCCCAATTCCACCTTCAAATTCTTCATAAGCCAACCAAAGGCCTGTCACGAAGATTGCAAAAGGATTTGTGACGCTTGCATGCAGCCCATCAGCGGCTTTGTGTACCACTGCCAGAATAAGGACTTGGACCTCCACCCTTGCTGCATAAGCCTCAACAAACAGCACAAAATCGGAGACATGGACTTCAATCTCCACAACAAAGTTCGAGGGAAGTGCTTGTCGTGTAACCATAAGAGCATTAATGGCCGCGCCCACGGCAACAATGGATGGTCCTACATGTCGGGGTGTGGAAAGTACTATGTTCACGTGGCTTGTCTC AAAGAAATGGCGATGAAGTTCCATCCCCATGAACTGGAGCTGGAGGAGTCCCAAGAAGCTTACACTTGCAATGGATGCAATGAAACAGGGTGCGGGCCACGATACCAATGCCCAGAATCAGAATGCAATTTTTATCTTCACAAAGAGTGCATGTTTCCACAAACCTCGCCAATTTCCCACGAATTCTTCCCCAATTCCACCTTCAAATTCTTCATAAGCCAACCAAAGGCCTGTCACGAAGATTGCAAAAGGATTTGTGACGCTTGCATGCAGCCCATCAGCGGCTTTGTGTACCACTGCCAGAATAAGGACTTGGACCTCCACCCTTGCTGCATAAGCCTCAACAAACAGCACAAAATCGGAGACATGGACTTCAATCTCCACAACAAAGTTCGAGGGAAGTGCTTGTCGTGTAACCATAAGAGCATTAATGGCCGCGCCCACGGCAACAATGGATGGTCCTACATGTCGGGGTGTGGAAAGTACTATGTTCACGTGGCTTGTCTC KEMAMKFHPHELELEESQEAYTCNGCNETGCGPRYQCPESECNFYLHKECMFPQTSPISHEFFPNSTFKFFISQPKACHEDCKRICDACMQPISGFVYHCQNKDLDLHPCCISLNKQHKIGDMDFNLHNKVRGKCLSCNHKSINGRAHGNNGWSYMSGCGKYYVHVACL Homology
BLAST of MS003047 vs. NCBI nr
Match: XP_022133591.1 (uncharacterized protein LOC111006130 [Momordica charantia]) HSP 1 Score: 240.7 bits (613), Expect = 8.9e-60 Identity = 104/151 (68.87%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of MS003047 vs. NCBI nr
Match: XP_022133597.1 (uncharacterized protein LOC111006136 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 6.0e-56 Identity = 102/172 (59.30%), Postives = 135/172 (78.49%), Query Frame = 0
BLAST of MS003047 vs. NCBI nr
Match: XP_038891268.1 (uncharacterized protein LOC120080612 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 3.9e-55 Identity = 98/160 (61.25%), Postives = 128/160 (80.00%), Query Frame = 0
BLAST of MS003047 vs. NCBI nr
Match: KAA0037668.1 (uncharacterized protein E6C27_scaffold277G003360 [Cucumis melo var. makuwa] >TYK22811.1 uncharacterized protein E5676_scaffold311G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 218.8 bits (556), Expect = 3.6e-53 Identity = 94/161 (58.39%), Postives = 127/161 (78.88%), Query Frame = 0
BLAST of MS003047 vs. NCBI nr
Match: XP_011656237.1 (uncharacterized protein LOC105435688 [Cucumis sativus] >KGN51305.1 hypothetical protein Csa_008405 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 6.2e-53 Identity = 97/163 (59.51%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS003047 vs. ExPASy TrEMBL
Match: A0A6J1BVJ4 (uncharacterized protein LOC111006130 OS=Momordica charantia OX=3673 GN=LOC111006130 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 4.3e-60 Identity = 104/151 (68.87%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of MS003047 vs. ExPASy TrEMBL
Match: A0A6J1BX53 (uncharacterized protein LOC111006136 OS=Momordica charantia OX=3673 GN=LOC111006136 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.9e-56 Identity = 102/172 (59.30%), Postives = 135/172 (78.49%), Query Frame = 0
BLAST of MS003047 vs. ExPASy TrEMBL
Match: A0A5A7T4E4 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00540 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53 Identity = 94/161 (58.39%), Postives = 127/161 (78.88%), Query Frame = 0
BLAST of MS003047 vs. ExPASy TrEMBL
Match: A0A0A0KNT1 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G516820 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 3.0e-53 Identity = 97/163 (59.51%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS003047 vs. ExPASy TrEMBL
Match: A0A0A0KS98 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517070 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52 Identity = 93/161 (57.76%), Postives = 126/161 (78.26%), Query Frame = 0
BLAST of MS003047 vs. TAIR 10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28 Identity = 65/166 (39.16%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of MS003047 vs. TAIR 10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10 Identity = 33/107 (30.84%), Postives = 51/107 (47.66%), Query Frame = 0
BLAST of MS003047 vs. TAIR 10
Match: AT2G17740.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 33/112 (29.46%), Postives = 54/112 (48.21%), Query Frame = 0
BLAST of MS003047 vs. TAIR 10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09 Identity = 31/104 (29.81%), Postives = 48/104 (46.15%), Query Frame = 0
BLAST of MS003047 vs. TAIR 10
Match: AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09 Identity = 33/104 (31.73%), Postives = 50/104 (48.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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