Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGACGGAGAATACGTTGTGTGATGTGAAACACTCGCATGATGAATTGAAGTTTGTGGAGTCTAAAGGAGCTTACGTTTGCCTTGGGTGCATGGAACCAGGCATCGGGTCACGATACACATGCGAAAAATGCAGCTTCAAACTTCACAAATGCTGCATGAGGCCACAAAGAAGTTGCCACGAATTCTTCCCCAATGCCACCTTCGAATTCTTCCAAACCCCACCAAATACAAACAATAATAATAATAATAATTGCGAGGCTTGCACAATGTCCATCGGAGGCTACTCGTACCACTGCCAAAATCAGAACTTGAACCTCCACCCCGTTTGTATGGAACTCACGGCATATTACAAACTCAGATCAGACGACGGCCACGGCCACCGCGCCGACGTCGCCTTGAACCTCCACGACAAAGTCCGAGGTGAGTGTTTTTTGTGCCACCAGACCAAGAGCATCAATATTGGTAGCCACCGCGACAACAAAAATGGCTGGTCCTACGTGTCAGACTGTGGGAGCTTCCATTTCCACGTGGCTTGTCTC
mRNA sequence
AGGACGGAGAATACGTTGTGTGATGTGAAACACTCGCATGATGAATTGAAGTTTGTGGAGTCTAAAGGAGCTTACGTTTGCCTTGGGTGCATGGAACCAGGCATCGGGTCACGATACACATGCGAAAAATGCAGCTTCAAACTTCACAAATGCTGCATGAGGCCACAAAGAAGTTGCCACGAATTCTTCCCCAATGCCACCTTCGAATTCTTCCAAACCCCACCAAATACAAACAATAATAATAATAATAATTGCGAGGCTTGCACAATGTCCATCGGAGGCTACTCGTACCACTGCCAAAATCAGAACTTGAACCTCCACCCCGTTTGTATGGAACTCACGGCATATTACAAACTCAGATCAGACGACGGCCACGGCCACCGCGCCGACGTCGCCTTGAACCTCCACGACAAAGTCCGAGGTGAGTGTTTTTTGTGCCACCAGACCAAGAGCATCAATATTGGTAGCCACCGCGACAACAAAAATGGCTGGTCCTACGTGTCAGACTGTGGGAGCTTCCATTTCCACGTGGCTTGTCTC
Coding sequence (CDS)
AGGACGGAGAATACGTTGTGTGATGTGAAACACTCGCATGATGAATTGAAGTTTGTGGAGTCTAAAGGAGCTTACGTTTGCCTTGGGTGCATGGAACCAGGCATCGGGTCACGATACACATGCGAAAAATGCAGCTTCAAACTTCACAAATGCTGCATGAGGCCACAAAGAAGTTGCCACGAATTCTTCCCCAATGCCACCTTCGAATTCTTCCAAACCCCACCAAATACAAACAATAATAATAATAATAATTGCGAGGCTTGCACAATGTCCATCGGAGGCTACTCGTACCACTGCCAAAATCAGAACTTGAACCTCCACCCCGTTTGTATGGAACTCACGGCATATTACAAACTCAGATCAGACGACGGCCACGGCCACCGCGCCGACGTCGCCTTGAACCTCCACGACAAAGTCCGAGGTGAGTGTTTTTTGTGCCACCAGACCAAGAGCATCAATATTGGTAGCCACCGCGACAACAAAAATGGCTGGTCCTACGTGTCAGACTGTGGGAGCTTCCATTTCCACGTGGCTTGTCTC
Protein sequence
RTENTLCDVKHSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQRSCHEFFPNATFEFFQTPPNTNNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSDDGHGHRADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL
Homology
BLAST of MS003046 vs. NCBI nr
Match:
XP_038891268.1 (uncharacterized protein LOC120080612 [Benincasa hispida])
HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35
Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 0
Query: 6 LCDVKHSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQRS--CHEFF 65
LC+ H EL+ + Y C GC E G G RY CEKC F LHK CM P+ S HEFF
Sbjct: 5 LCNPSHLKHELELKKYLKPYTCDGCKEIGFGPRYRCEKCDFDLHKACMFPKNSPISHEFF 64
Query: 66 PNATFEFFQTPPNT-NNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSD 125
P +TF+FF+ PP ++ C+ACT I G+ YHC+ ++L+LHP C L Y++
Sbjct: 65 PRSTFKFFKIPPRACHDKCRRICDACTKPINGFMYHCKKRDLDLHPCCENLKMNYQIE-- 124
Query: 126 DGHGHRADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVAC 180
DV NLH +V+GEC C++ + G H NGWSY+S+C +H HVAC
Sbjct: 125 -------DVEFNLHKEVQGECMWCNKKTIRSHGQH----NGWSYISECRKYHVHVAC 168
BLAST of MS003046 vs. NCBI nr
Match:
XP_022133598.1 (uncharacterized protein LOC111006137, partial [Momordica charantia])
HSP 1 Score: 157.5 bits (397), Expect = 1.1e-34
Identity = 76/158 (48.10%), Postives = 98/158 (62.03%), Query Frame = 0
Query: 25 YVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQRS--CHEFFPNATFEFFQTPPNT-NNNN 84
Y C GC E G G RY CEKC F LH+ CM PQ S HEFFP +TF+F +TPP +++
Sbjct: 11 YTCDGCKERGFGPRYRCEKCDFDLHRECMFPQTSPFRHEFFPGSTFKFLRTPPKACHDHC 70
Query: 85 NNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSDDGHGHRADVALNLHDKVRG 144
CEAC M I G+ YHC+ +L+LHP C +L Y+++ DD ++ NL KVRG
Sbjct: 71 KLQCEACRMDINGFVYHCKEDDLDLHPCCRKLEKEYRVKEDD-----EEMVFNLDKKVRG 130
Query: 145 ECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVAC 180
+C C + KSI G H NGWSY+S+C +H HVAC
Sbjct: 131 KCMWC-KRKSIKEGDH---SNGWSYISECRKYHIHVAC 159
BLAST of MS003046 vs. NCBI nr
Match:
XP_022133591.1 (uncharacterized protein LOC111006130 [Momordica charantia])
HSP 1 Score: 157.5 bits (397), Expect = 1.1e-34
Identity = 76/159 (47.80%), Postives = 98/159 (61.64%), Query Frame = 0
Query: 25 YVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQR--SCHEFFPNATFEFFQTPPNT-NNNN 84
Y C GC E G G Y CE F LHK C P+ H+FFPN+TF FF+ PP +++
Sbjct: 5 YTCYGCKEVGFGPHYQCENYYFDLHKECKFPETWPISHQFFPNSTFNFFRIPPKACHDDC 64
Query: 85 NNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSDDGHGHRADVALNLHDKVRG 144
C+AC I G+ YHCQNQ+L+LHP C L YK++ DV NLH +VRG
Sbjct: 65 RRLCDACRKPINGFVYHCQNQDLDLHPCCRNLNKNYKIK---------DVEFNLHKEVRG 124
Query: 145 ECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL 181
+C C++ KSIN G+H D NGWSY+S+CG +H HVAC+
Sbjct: 125 KCLWCNR-KSINGGTHND--NGWSYISECGKYHVHVACI 151
BLAST of MS003046 vs. NCBI nr
Match:
KAG6578699.1 (hypothetical protein SDJN03_23147, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 156.4 bits (394), Expect = 2.4e-34
Identity = 74/178 (41.57%), Postives = 98/178 (55.06%), Query Frame = 0
Query: 5 TLCDVKHSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQR--SCHEF 64
TL + H EL+ E K Y C GC E G G RY C+KC F LHK CM + HEF
Sbjct: 5 TLRNPSHQMHELELKEYKKPYHCDGCKETGFGPRYRCDKCDFDLHKACMFAHNAPNSHEF 64
Query: 65 FPNATFEFFQTPPNTNNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSD 124
FP +TFEF + PP + C+AC +I G+ +HC+ +L+LHP C L Y++
Sbjct: 65 FPGSTFEFLRNPPKCCHEAIVRCDACRKTINGFVFHCEEDDLDLHPCCRNLKNRYQIE-- 124
Query: 125 DGHGHRADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL 181
DV NLH +V+G+C C + H NGWSY+SDCG++H HVAC+
Sbjct: 125 -------DVEFNLHKEVKGKCMWCKSRRP----KHGGRGNGWSYISDCGNYHVHVACV 169
BLAST of MS003046 vs. NCBI nr
Match:
KAG7016237.1 (hypothetical protein SDJN02_21343, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 156.4 bits (394), Expect = 2.4e-34
Identity = 74/178 (41.57%), Postives = 98/178 (55.06%), Query Frame = 0
Query: 5 TLCDVKHSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQR--SCHEF 64
TL + H EL+ E K Y C GC E G G RY C+KC F LHK CM + HEF
Sbjct: 28 TLRNPSHQMHELELKEYKKPYHCDGCKETGFGPRYRCDKCDFDLHKACMFAHNAPNSHEF 87
Query: 65 FPNATFEFFQTPPNTNNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSD 124
FP +TFEF + PP + C+AC +I G+ +HC+ +L+LHP C L Y++
Sbjct: 88 FPGSTFEFLRNPPKCCHEAIVRCDACRKTINGFVFHCEEDDLDLHPCCRNLKNRYQIE-- 147
Query: 125 DGHGHRADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL 181
DV NLH +V+G+C C + H NGWSY+SDCG++H HVAC+
Sbjct: 148 -------DVEFNLHKEVKGKCMWCKSRRP----KHGGRGNGWSYISDCGNYHVHVACV 192
BLAST of MS003046 vs. ExPASy TrEMBL
Match:
A0A6J1BVJ4 (uncharacterized protein LOC111006130 OS=Momordica charantia OX=3673 GN=LOC111006130 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 5.1e-35
Identity = 76/159 (47.80%), Postives = 98/159 (61.64%), Query Frame = 0
Query: 25 YVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQR--SCHEFFPNATFEFFQTPPNT-NNNN 84
Y C GC E G G Y CE F LHK C P+ H+FFPN+TF FF+ PP +++
Sbjct: 5 YTCYGCKEVGFGPHYQCENYYFDLHKECKFPETWPISHQFFPNSTFNFFRIPPKACHDDC 64
Query: 85 NNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSDDGHGHRADVALNLHDKVRG 144
C+AC I G+ YHCQNQ+L+LHP C L YK++ DV NLH +VRG
Sbjct: 65 RRLCDACRKPINGFVYHCQNQDLDLHPCCRNLNKNYKIK---------DVEFNLHKEVRG 124
Query: 145 ECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL 181
+C C++ KSIN G+H D NGWSY+S+CG +H HVAC+
Sbjct: 125 KCLWCNR-KSINGGTHND--NGWSYISECGKYHVHVACI 151
BLAST of MS003046 vs. ExPASy TrEMBL
Match:
A0A6J1BZK4 (uncharacterized protein LOC111006137 OS=Momordica charantia OX=3673 GN=LOC111006137 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 5.1e-35
Identity = 76/158 (48.10%), Postives = 98/158 (62.03%), Query Frame = 0
Query: 25 YVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQRS--CHEFFPNATFEFFQTPPNT-NNNN 84
Y C GC E G G RY CEKC F LH+ CM PQ S HEFFP +TF+F +TPP +++
Sbjct: 11 YTCDGCKERGFGPRYRCEKCDFDLHRECMFPQTSPFRHEFFPGSTFKFLRTPPKACHDHC 70
Query: 85 NNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSDDGHGHRADVALNLHDKVRG 144
CEAC M I G+ YHC+ +L+LHP C +L Y+++ DD ++ NL KVRG
Sbjct: 71 KLQCEACRMDINGFVYHCKEDDLDLHPCCRKLEKEYRVKEDD-----EEMVFNLDKKVRG 130
Query: 145 ECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVAC 180
+C C + KSI G H NGWSY+S+C +H HVAC
Sbjct: 131 KCMWC-KRKSIKEGDH---SNGWSYISECRKYHIHVAC 159
BLAST of MS003046 vs. ExPASy TrEMBL
Match:
A0A0A0KNT1 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G516820 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34
Identity = 82/182 (45.05%), Postives = 100/182 (54.95%), Query Frame = 0
Query: 4 NTLCDVKHSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQRS--CHE 63
N LC EL+ E Y C GC E G G RY CEKC+F LHK CM PQ S HE
Sbjct: 3 NQLCTPNQLKHELELKEYLKPYTCDGCKEIGFGPRYRCEKCNFDLHKACMFPQDSPIFHE 62
Query: 64 FFPNATFEFFQTPPNT-NNNNNNNCEACTMSIGGYSYHCQ--NQNLNLHPVCMELTAYYK 123
FFP + FEFF+TPP ++ C+ACT I G+ YHC+ L+LHP C L YK
Sbjct: 63 FFPQSAFEFFKTPPRACCDDCKKFCDACTKPINGFMYHCKKVKVELDLHPCCRNLNRNYK 122
Query: 124 LRSDDGHGHRADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVA 181
+ DV NL+ KV+G+C C K I H NGWSY+S+CG +H HVA
Sbjct: 123 IE---------DVEFNLYKKVKGKCMWC---KKRTINPH-GQTNGWSYISECGEYHVHVA 171
BLAST of MS003046 vs. ExPASy TrEMBL
Match:
A0A6J1BX53 (uncharacterized protein LOC111006136 OS=Momordica charantia OX=3673 GN=LOC111006136 PE=4 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 2.8e-33
Identity = 76/173 (43.93%), Postives = 99/173 (57.23%), Query Frame = 0
Query: 11 HSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQ--RSCHEFFPNATF 70
H + EL+ + Y C GC E G G RY CEKC F LH+ CM PQ S HEFF + F
Sbjct: 10 HPNHELEMKKYLKPYTCDGCKETGFGPRYRCEKCDFDLHQACMFPQMSSSSHEFFLGSIF 69
Query: 71 EFFQTPPNT-NNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSDDGHGH 130
+FF+TPP ++ C+AC I G+ YHC+ +L+LHP C L Y++
Sbjct: 70 KFFRTPPRACHDKCRRMCDACIKPITGFVYHCEKDDLDLHPCCRNLNRSYRIE------- 129
Query: 131 RADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL 181
DV NLH KVRG+C C++ K+I S N NGWSY+S C +H HVAC+
Sbjct: 130 --DVEFNLHKKVRGKCLWCNK-KNIKGSS---NDNGWSYISTCEKYHVHVACV 169
BLAST of MS003046 vs. ExPASy TrEMBL
Match:
A0A5A7T4E4 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00540 PE=4 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 3.7e-33
Identity = 76/178 (42.70%), Postives = 97/178 (54.49%), Query Frame = 0
Query: 6 LCDVKHSHDELKFVESKGAYVCLGCMEPGIGSRYTCEKCSFKLHKCCMRPQRS--CHEFF 65
LC EL+ + Y C GC E G G RY CEKC F LHK CM PQ S HEFF
Sbjct: 5 LCTPNQLKHELELKKYLKPYTCDGCKEIGFGPRYRCEKCDFDLHKACMFPQNSPVFHEFF 64
Query: 66 PNATFEFFQTPPNT-NNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVCMELTAYYKLRSD 125
P +TF+F +TPP ++ C+ACT I G+ YHC+ L+LHP C L Y++
Sbjct: 65 PRSTFKFLKTPPRACHDECKRICDACTKPINGFMYHCEKDQLDLHPCCRNLNRKYQIE-- 124
Query: 126 DGHGHRADVALNLHDKVRGECFLCHQTKSINIGSHRDNKNGWSYVSDCGSFHFHVACL 181
DV NL+ +V+ +C C K I H NGWSY+S+CG +H HVAC+
Sbjct: 125 -------DVKFNLYKEVQRKCMWC---KKKTIKRH-GQSNGWSYISECGEYHVHVACV 169
BLAST of MS003046 vs. TAIR 10
Match:
AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein )
HSP 1 Score: 48.1 bits (113), Expect = 8.4e-06
Identity = 30/104 (28.85%), Postives = 46/104 (44.23%), Query Frame = 0
Query: 11 HSHDELKF-VESKGAYVCLGCMEPGIGSRYTCEK--CSFKLHKCCM-RPQRSCHEFFPNA 70
H+H F + + C GC G + C K C + LHK C P + ++ +
Sbjct: 21 HNHPLRVFKAKEEDETACSGCELELTGQAFKCIKSECDYFLHKSCFDLPSETNNKSHQDH 80
Query: 71 TFEFFQTPPNTNNNNNNNCEACTMSIGGYSYHCQNQNLNLHPVC 111
+PP ++ + C+AC G+SYHC N N +LH C
Sbjct: 81 PLTLLHSPP--DDRSVYTCDACDQYGSGFSYHCSNCNYSLHVGC 122
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038891268.1 | 1.6e-35 | 43.50 | uncharacterized protein LOC120080612 [Benincasa hispida] | [more] |
XP_022133598.1 | 1.1e-34 | 48.10 | uncharacterized protein LOC111006137, partial [Momordica charantia] | [more] |
XP_022133591.1 | 1.1e-34 | 47.80 | uncharacterized protein LOC111006130 [Momordica charantia] | [more] |
KAG6578699.1 | 2.4e-34 | 41.57 | hypothetical protein SDJN03_23147, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016237.1 | 2.4e-34 | 41.57 | hypothetical protein SDJN02_21343, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BVJ4 | 5.1e-35 | 47.80 | uncharacterized protein LOC111006130 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A6J1BZK4 | 5.1e-35 | 48.10 | uncharacterized protein LOC111006137 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A0A0KNT1 | 1.5e-34 | 45.05 | Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=C... | [more] |
A0A6J1BX53 | 2.8e-33 | 43.93 | uncharacterized protein LOC111006136 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A5A7T4E4 | 3.7e-33 | 42.70 | Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G43520.1 | 8.4e-06 | 28.85 | Cysteine/Histidine-rich C1 domain family protein | [more] |