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MS003033 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAGATGGATGTGAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTTCTTATTGCTTGGGCCGCAGCTCTCCAGGTTCGTTCCCTGTTTTAGGGTTTTAACTTTACCGCTTTGTTTTCCCACTCGAACCATCTGTTGTTGTAGAGCTGCGAGCTGCCTTGGATTCTGTGCTCCATTTGAACTTTGAAGTTAAATGTGGGGAATTACTGTTACAGGGGCACATGATGTGGTTGCAGAGGCAGGATTCTTTTAAGCAGAAGTTTGGGACTCCCAATCAAGAAAATGATCCT GAGATGGATGTGAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTTCTTATTGCTTGGGCCGCAGCTCTCCAGGGGCACATGATGTGGTTGCAGAGGCAGGATTCTTTTAAGCAGAAGTTTGGGACTCCCAATCAAGAAAATGATCCT GAGATGGATGTGAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTTCTTATTGCTTGGGCCGCAGCTCTCCAGGGGCACATGATGTGGTTGCAGAGGCAGGATTCTTTTAAGCAGAAGTTTGGGACTCCCAATCAAGAAAATGATCCT EMDVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTPNQENDP Homology
BLAST of MS003033 vs. NCBI nr
Match: XP_022134369.1 (uncharacterized protein LOC111006648 [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of MS003033 vs. NCBI nr
Match: XP_022962147.1 (uncharacterized protein LOC111462684 [Cucurbita moschata] >XP_023534763.1 uncharacterized protein LOC111796233 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MS003033 vs. NCBI nr
Match: XP_022990508.1 (uncharacterized protein LOC111487347 [Cucurbita maxima]) HSP 1 Score: 105.1 bits (261), Expect = 1.8e-19 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MS003033 vs. NCBI nr
Match: XP_008463489.1 (PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >XP_016903048.1 PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >TYK05785.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 2.6e-18 Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0
BLAST of MS003033 vs. NCBI nr
Match: XP_031742184.1 (uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742185.1 uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742186.1 uncharacterized protein LOC101219597 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 2.6e-18 Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0
BLAST of MS003033 vs. ExPASy TrEMBL
Match: A0A6J1BYL0 (uncharacterized protein LOC111006648 OS=Momordica charantia OX=3673 GN=LOC111006648 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.1e-22 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of MS003033 vs. ExPASy TrEMBL
Match: A0A6J1HBY0 (uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC111462684 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.7e-20 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MS003033 vs. ExPASy TrEMBL
Match: A0A6J1JTH2 (uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.7e-20 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of MS003033 vs. ExPASy TrEMBL
Match: A0A1S3CJC2 (uncharacterized protein LOC103501645 OS=Cucumis melo OX=3656 GN=LOC103501645 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18 Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0
BLAST of MS003033 vs. ExPASy TrEMBL
Match: A0A5D3C322 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002860 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18 Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0
BLAST of MS003033 vs. TAIR 10
Match: AT2G39500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 81.3 bits (199), Expect = 2.6e-16 Identity = 33/48 (68.75%), Postives = 43/48 (89.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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