MS003028 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTGGTGCAGATGAAGGAGAATGTCCAGTGTGGAATGAGAAATTTACATTCCGAGCAGAGTATCCCGGAACAGGCGACGGTTTCAAGCTCATCCTCAGAATCATGGTCCATGACACCTCTTCTGATGATTTCATTGGCCAAGCCTCGTAAGATCTTTGATCTTCTTCCATGAAATTGAGTTATTGATGGCAACATTGCATTAGAAAGAAGTTCCAAATGAATGAGTATTGTATTGCAGGGTATATGTGGAAGATTTATTAGCTGTGGGAGTCCAAAATGGCAAATCGGAGTTACGGGCTCAAAAGTATAGCGTTGTTGGTGCTGATCTGAACTACTGTGGAGAATTCAAGTGGGAGCGACCTTCACCCAGAAGGTA ATTGGTGCAGATGAAGGAGAATGTCCAGTGTGGAATGAGAAATTTACATTCCGAGCAGAGTATCCCGGAACAGGCGACGGTTTCAAGCTCATCCTCAGAATCATGGTCCATGACACCTCTTCTGATGATTTCATTGGCCAAGCCTCGGTATATGTGGAAGATTTATTAGCTGTGGGAGTCCAAAATGGCAAATCGGAGTTACGGGCTCAAAAGTATAGCGTTGTTGGTGCTGATCTGAACTACTGTGGAGAACAAGTGGGAGCGACCTTCACCCAGAAGGTA ATTGGTGCAGATGAAGGAGAATGTCCAGTGTGGAATGAGAAATTTACATTCCGAGCAGAGTATCCCGGAACAGGCGACGGTTTCAAGCTCATCCTCAGAATCATGGTCCATGACACCTCTTCTGATGATTTCATTGGCCAAGCCTCGGTATATGTGGAAGATTTATTAGCTGTGGGAGTCCAAAATGGCAAATCGGAGTTACGGGCTCAAAAGTATAGCGTTGTTGGTGCTGATCTGAACTACTGTGGAGAACAAGTGGGAGCGACCTTCACCCAGAAGGTA IGADEGECPVWNEKFTFRAEYPGTGDGFKLILRIMVHDTSSDDFIGQASVYVEDLLAVGVQNGKSELRAQKYSVVGADLNYCGEQVGATFTQKV Homology
BLAST of MS003028 vs. NCBI nr
Match: XP_022134552.1 (elicitor-responsive protein 1 [Momordica charantia]) HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of MS003028 vs. NCBI nr
Match: XP_022938500.1 (elicitor-responsive protein 1-like [Cucurbita moschata]) HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32 Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of MS003028 vs. NCBI nr
Match: KAG6578692.1 (16 kDa phloem protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.1 bits (370), Expect = 7.5e-32 Identity = 71/95 (74.74%), Postives = 80/95 (84.21%), Query Frame = 0
BLAST of MS003028 vs. NCBI nr
Match: KGN51319.1 (hypothetical protein Csa_008301 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31 Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of MS003028 vs. NCBI nr
Match: XP_004142763.2 (synaptotagmin-1 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31 Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of MS003028 vs. ExPASy Swiss-Prot
Match: Q9M2T2 (16 kDa phloem protein 1 OS=Arabidopsis thaliana OX=3702 GN=PP16-1 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20 Identity = 44/82 (53.66%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of MS003028 vs. ExPASy Swiss-Prot
Match: Q9ZT47 (16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of MS003028 vs. ExPASy Swiss-Prot
Match: Q9ZT46 (16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3) HSP 1 Score: 81.3 bits (199), Expect = 6.6e-15 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of MS003028 vs. ExPASy Swiss-Prot
Match: A2WWV5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 4.3e-14 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of MS003028 vs. ExPASy Swiss-Prot
Match: Q0JHU5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.3e-14 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of MS003028 vs. ExPASy TrEMBL
Match: A0A6J1BZX2 (elicitor-responsive protein 1 OS=Momordica charantia OX=3673 GN=LOC111006769 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.2e-36 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of MS003028 vs. ExPASy TrEMBL
Match: A0A6J1FJZ3 (elicitor-responsive protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444720 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.5e-33 Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of MS003028 vs. ExPASy TrEMBL
Match: A0A0A0KQY4 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517170 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31 Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of MS003028 vs. ExPASy TrEMBL
Match: A0A5D3DGQ6 (Elicitor-responsive protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00230 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.8e-31 Identity = 70/96 (72.92%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of MS003028 vs. ExPASy TrEMBL
Match: A0A6J1K000 (elicitor-responsive protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488961 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.8e-31 Identity = 69/95 (72.63%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of MS003028 vs. TAIR 10
Match: AT3G55470.2 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 101.7 bits (252), Expect = 3.4e-22 Identity = 44/85 (51.76%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of MS003028 vs. TAIR 10
Match: AT3G55470.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 100.5 bits (249), Expect = 7.5e-22 Identity = 44/82 (53.66%), Postives = 65/82 (79.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|