MS003015 (gene) Bitter gourd (TR) v1

Overview


Name	MS003015
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Glycosyl transferase
Location	scaffold595_1: 1045306 .. 1046016 (+)
RNA-Seq Expression	MS003015
Synteny	MS003015

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGCGAAGACGAGCCTGTTCCTTATCCTTTCATTGCTTAGTAGTTTGAGGGTGACCGTGTGCCATTCAGAGGACCCCGTTCCGGTCCCATGGCCTCTCCAATTTCACTCCGTTCTCTTGATGAATTACAGCGGGATCCTCCAGATAATCGACCTCTGGTACGACTGGCCCAATGGCCGCAACTTCAACATCATCCAGCACCAGCTCGGCAATGTTGTCTACGACCTTGAGTGGAACAACGGGACTTCCTTTGTCTACACTTTGGACTCCTCCAAGACTTGCTCTACCTCTCAGTTGGAGGTGGGTATTCTTCGCCCCAACTGGCTCGACGGGGCCAATTATCTGGGTCACCGCCATGTCGATGGATTCCTCTGCAATGTCTGGGAGAAGGTCGACTTCATCTGGTATTACGAGGACGTCGACACCAAAAGGCCAGTTCACTGGCTCTTCTACACTGGTAAAATTTCCCCCTCTTCCGCTCAACTCTACTACTCTTTCTTTACCTGGCCTAAGGGCTCCCACTTTTTGACTGCAGGAAGACAGGCTCATGTCATGACGTTTGAAGTCGGAGCTATGCTGGAAGATGAGAAATGGCAAGCCCCCGTCTACTGCTTTGACGGCAAGGGAGCTCATCTTCATAACGGGGTTCCCAACCACAAGAATTTACCTGTCATAGACGGAGCTCTAAGGGCCCCCCTTCTCCCTGCAATC

mRNA sequence

AAGGCGAAGACGAGCCTGTTCCTTATCCTTTCATTGCTTAGTAGTTTGAGGGTGACCGTGTGCCATTCAGAGGACCCCGTTCCGGTCCCATGGCCTCTCCAATTTCACTCCGTTCTCTTGATGAATTACAGCGGGATCCTCCAGATAATCGACCTCTGGTACGACTGGCCCAATGGCCGCAACTTCAACATCATCCAGCACCAGCTCGGCAATGTTGTCTACGACCTTGAGTGGAACAACGGGACTTCCTTTGTCTACACTTTGGACTCCTCCAAGACTTGCTCTACCTCTCAGTTGGAGGTGGGTATTCTTCGCCCCAACTGGCTCGACGGGGCCAATTATCTGGGTCACCGCCATGTCGATGGATTCCTCTGCAATGTCTGGGAGAAGGTCGACTTCATCTGGTATTACGAGGACGTCGACACCAAAAGGCCAGTTCACTGGCTCTTCTACACTGTCGGAGCTATGCTGGAAGATGAGAAATGGCAAGCCCCCGTCTACTGCTTTGACGGCAAGGGAGCTCATCTTCATAACGGGGTTCCCAACCACAAGAATTTACCTGTCATAGACGGAGCTCTAAGGGCCCCCCTTCTCCCTGCAATC

Coding sequence (CDS)

AAGGCGAAGACGAGCCTGTTCCTTATCCTTTCATTGCTTAGTAGTTTGAGGGTGACCGTGTGCCATTCAGAGGACCCCGTTCCGGTCCCATGGCCTCTCCAATTTCACTCCGTTCTCTTGATGAATTACAGCGGGATCCTCCAGATAATCGACCTCTGGTACGACTGGCCCAATGGCCGCAACTTCAACATCATCCAGCACCAGCTCGGCAATGTTGTCTACGACCTTGAGTGGAACAACGGGACTTCCTTTGTCTACACTTTGGACTCCTCCAAGACTTGCTCTACCTCTCAGTTGGAGGTGGGTATTCTTCGCCCCAACTGGCTCGACGGGGCCAATTATCTGGGTCACCGCCATGTCGATGGATTCCTCTGCAATGTCTGGGAGAAGGTCGACTTCATCTGGTATTACGAGGACGTCGACACCAAAAGGCCAGTTCACTGGCTCTTCTACACTGTCGGAGCTATGCTGGAAGATGAGAAATGGCAAGCCCCCGTCTACTGCTTTGACGGCAAGGGAGCTCATCTTCATAACGGGGTTCCCAACCACAAGAATTTACCTGTCATAGACGGAGCTCTAAGGGCCCCCCTTCTCCCTGCAATC

Protein sequence

KAKTSLFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGRNFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHVDGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYTVGAMLEDEKWQAPVYCFDGKGAHLHNGVPNHKNLPVIDGALRAPLLPAI

Homology

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BLAST of MS003015 vs. NCBI nr
Match: XP_022148937.1 (uncharacterized protein At4g14100-like [Momordica charantia])

HSP 1 Score: 427.9 bits (1099), Expect = 4.7e-116
Identity = 199/211 (94.31%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   KAKTSLFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 60
           KAKTSLFLILSLLSSLRV+VCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR
Sbjct: 7   KAKTSLFLILSLLSSLRVSVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 66

Query: 61  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 120
           NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV
Sbjct: 67  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 126

Query: 121 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 180
           DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT          VGA+LEDEKWQAPVYCFD
Sbjct: 127 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYTGRQAHVMTFEVGAVLEDEKWQAPVYCFD 186

Query: 181 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI
Sbjct: 187 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 217

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BLAST of MS003015 vs. NCBI nr
Match: XP_022991566.1 (uncharacterized protein At4g14100-like [Cucurbita maxima])

HSP 1 Score: 351.7 bits (901), Expect = 4.3e-93
Identity = 165/211 (78.20%), Postives = 183/211 (86.73%), Query Frame = 0


Query: 2   AKTSLFLILSLLS-SLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 61
           +K + FL+LSLL+ S+R +V  SEDPVP+PWPLQFHS+L MNYSGILQIIDLWYDWPNGR
Sbjct: 3   SKATFFLVLSLLTVSVRRSV--SEDPVPIPWPLQFHSILFMNYSGILQIIDLWYDWPNGR 62

Query: 62  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 121
           NFNIIQHQLGNV+YDLEWNNGTSF YTLDSSKTCS++QLEVGILRPNWLDGANYLG RHV
Sbjct: 63  NFNIIQHQLGNVLYDLEWNNGTSFFYTLDSSKTCSSAQLEVGILRPNWLDGANYLGQRHV 122

Query: 122 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 181
           +GFLCNVWEKVDFIWYYEDV+TKRPVHW+FYT          VGA+LEDEKWQAPVYCFD
Sbjct: 123 NGFLCNVWEKVDFIWYYEDVETKRPVHWVFYTGRQAHVMTFEVGAVLEDEKWQAPVYCFD 182

Query: 182 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKG   +NGV  H+NLPV+DG LR  L PAI
Sbjct: 183 GKGGGANNGV-LHQNLPVMDGVLRGSLFPAI 210

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BLAST of MS003015 vs. NCBI nr
Match: XP_023548717.1 (uncharacterized protein At4g14100-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 164/211 (77.73%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 2   AKTSLFLILSLLS-SLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 61
           +K + FL+LSLL+ S+R +V  SEDP+P PWPLQFHS+L MNYSGILQIIDLWYDWPNGR
Sbjct: 3   SKATFFLVLSLLAVSVRRSV--SEDPIPTPWPLQFHSILFMNYSGILQIIDLWYDWPNGR 62

Query: 62  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 121
           NFNIIQHQLGNV+YDLEWNNGTSF YTLDSSKTCS++QLEVGILRPNWLDGANYLG RHV
Sbjct: 63  NFNIIQHQLGNVLYDLEWNNGTSFFYTLDSSKTCSSAQLEVGILRPNWLDGANYLGQRHV 122

Query: 122 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 181
           +GFLCNVWEKVDFIWYYEDV+TKRPVHW+FYT          VGA+LEDEKWQAPVYCFD
Sbjct: 123 NGFLCNVWEKVDFIWYYEDVETKRPVHWVFYTGRQAHVMTFEVGAVLEDEKWQAPVYCFD 182

Query: 182 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKG   +NGV  H+NLPV+DG LR  L PAI
Sbjct: 183 GKGGGANNGV-LHQNLPVMDGVLRGSLFPAI 210

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BLAST of MS003015 vs. NCBI nr
Match: XP_023548718.1 (uncharacterized protein At4g14100-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.0 bits (894), Expect = 2.8e-92
Identity = 163/211 (77.25%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 2   AKTSLFLILSLLS-SLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 61
           +K + FL+LSLL+ S+R +V  SEDP+P PWPLQFHS+L MNYSGILQIIDLWYDWPNGR
Sbjct: 3   SKATFFLVLSLLAVSVRRSV--SEDPIPTPWPLQFHSILFMNYSGILQIIDLWYDWPNGR 62

Query: 62  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 121
           NFNIIQHQLGNV+YDLEWNNGTSF YTLDSSKTCS++QLEVGILRPNWLDGANY+G RHV
Sbjct: 63  NFNIIQHQLGNVLYDLEWNNGTSFFYTLDSSKTCSSAQLEVGILRPNWLDGANYVGQRHV 122

Query: 122 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 181
           +GFLCNVWEKVDFIWYYEDV+TKRPVHW+FYT          VGA+LEDEKWQAPVYCFD
Sbjct: 123 NGFLCNVWEKVDFIWYYEDVETKRPVHWVFYTGRQAHVMTFEVGAVLEDEKWQAPVYCFD 182

Query: 182 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKG   +NGV  H+NLPV+DG LR  L PAI
Sbjct: 183 GKGGGANNGV-LHQNLPVMDGVLRGSLFPAI 210

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BLAST of MS003015 vs. NCBI nr
Match: KAG6576096.1 (hypothetical protein SDJN03_26735, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014614.1 hypothetical protein SDJN02_24793, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 162/211 (76.78%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 2   AKTSLFLILSLLS-SLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 61
           +K + FL+LSLL+ S+R +V  SEDPVP PWPLQFHS+L  NYSGILQIIDLWYDWPNGR
Sbjct: 3   SKATFFLVLSLLTVSVRRSV--SEDPVPTPWPLQFHSILFANYSGILQIIDLWYDWPNGR 62

Query: 62  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 121
           NFNIIQHQLGNV+YDLEWNNGTSF YTLDSSKTCS  + EVGILRPNWLDGANYLG RHV
Sbjct: 63  NFNIIQHQLGNVLYDLEWNNGTSFYYTLDSSKTCSPFKFEVGILRPNWLDGANYLGQRHV 122

Query: 122 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 181
           +GFLCNVWEKVDFIWYYEDV+TKRPVHW+FYT          VGA+LEDEKWQAPVYCFD
Sbjct: 123 NGFLCNVWEKVDFIWYYEDVETKRPVHWVFYTGREAHVMTFEVGAVLEDEKWQAPVYCFD 182

Query: 182 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKG   +NGV  H+NLPV+DG LR  L PAI
Sbjct: 183 GKGGGANNGV-LHQNLPVMDGVLRGSLFPAI 210

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BLAST of MS003015 vs. ExPASy Swiss-Prot
Match: Q67YC9 (Uncharacterized protein At4g14100 OS=Arabidopsis thaliana OX=3702 GN=At4g14100 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-71
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 6   LFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGRNFNII 65
           + +++ +  +  V +  +++PVP PWP QFH+++ MNYSG L +IDLWYDW NGRNFNII
Sbjct: 8   IVIVIFIYITAGVKIAAADEPVPTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNII 67

Query: 66  QHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHVDGFLC 125
           Q QLG + YDLEWNNGTSF YTLD SK+C + QLEVGILRPNWLDGA YLG ++V GFLC
Sbjct: 68  QEQLGGITYDLEWNNGTSFFYTLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLC 127

Query: 126 NVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 171
           NVWEKVDFIWYYEDV+TKRPV W+FYT          VGA+LEDEKWQAPVYCF+
Sbjct: 128 NVWEKVDFIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFN 182

[Close]

BLAST of MS003015 vs. ExPASy TrEMBL
Match: A0A6J1D6E6 (uncharacterized protein At4g14100-like OS=Momordica charantia OX=3673 GN=LOC111017483 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.3e-116
Identity = 199/211 (94.31%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   KAKTSLFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 60
           KAKTSLFLILSLLSSLRV+VCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR
Sbjct: 7   KAKTSLFLILSLLSSLRVSVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 66

Query: 61  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 120
           NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV
Sbjct: 67  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 126

Query: 121 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 180
           DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT          VGA+LEDEKWQAPVYCFD
Sbjct: 127 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYTGRQAHVMTFEVGAVLEDEKWQAPVYCFD 186

Query: 181 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI
Sbjct: 187 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 217

[Close]

BLAST of MS003015 vs. ExPASy TrEMBL
Match: A0A6J1JR40 (uncharacterized protein At4g14100-like OS=Cucurbita maxima OX=3661 GN=LOC111488138 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 165/211 (78.20%), Postives = 183/211 (86.73%), Query Frame = 0


Query: 2   AKTSLFLILSLLS-SLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 61
           +K + FL+LSLL+ S+R +V  SEDPVP+PWPLQFHS+L MNYSGILQIIDLWYDWPNGR
Sbjct: 3   SKATFFLVLSLLTVSVRRSV--SEDPVPIPWPLQFHSILFMNYSGILQIIDLWYDWPNGR 62

Query: 62  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 121
           NFNIIQHQLGNV+YDLEWNNGTSF YTLDSSKTCS++QLEVGILRPNWLDGANYLG RHV
Sbjct: 63  NFNIIQHQLGNVLYDLEWNNGTSFFYTLDSSKTCSSAQLEVGILRPNWLDGANYLGQRHV 122

Query: 122 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 181
           +GFLCNVWEKVDFIWYYEDV+TKRPVHW+FYT          VGA+LEDEKWQAPVYCFD
Sbjct: 123 NGFLCNVWEKVDFIWYYEDVETKRPVHWVFYTGRQAHVMTFEVGAVLEDEKWQAPVYCFD 182

Query: 182 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKG   +NGV  H+NLPV+DG LR  L PAI
Sbjct: 183 GKGGGANNGV-LHQNLPVMDGVLRGSLFPAI 210

[Close]

BLAST of MS003015 vs. ExPASy TrEMBL
Match: A0A6J1GMU2 (uncharacterized protein At4g14100-like OS=Cucurbita moschata OX=3662 GN=LOC111455833 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 161/211 (76.30%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 2   AKTSLFLILSLLS-SLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGR 61
           +K + FL+LSLL+ S+R +V  SEDPVP PWPLQFHS+L  NYSGILQIIDLWYDWPNGR
Sbjct: 3   SKATFFLVLSLLTVSVRRSV--SEDPVPTPWPLQFHSILFANYSGILQIIDLWYDWPNGR 62

Query: 62  NFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHV 121
           NFNIIQHQLGNV+YDLEWNNGTSF YTLDSSKTCS  + EVGILRPNWLDGANYLG RHV
Sbjct: 63  NFNIIQHQLGNVLYDLEWNNGTSFYYTLDSSKTCSPFKFEVGILRPNWLDGANYLGQRHV 122

Query: 122 DGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 181
           +GFLCNVWEKVDFIWYYEDV+TKRPVHW+FYT          VGA+LEDEKWQAPVYCFD
Sbjct: 123 NGFLCNVWEKVDFIWYYEDVETKRPVHWVFYTGREAHVMTFEVGAVLEDEKWQAPVYCFD 182

Query: 182 GKGAHLHNGVPNHKNLPVIDGALRAPLLPAI 202
           GKG   +NGV  H+N PV+DG LR  L PAI
Sbjct: 183 GKGGGANNGV-LHQNFPVMDGVLRGSLFPAI 210

[Close]

BLAST of MS003015 vs. ExPASy TrEMBL
Match: A0A0A0KDE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091310 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86
Identity = 157/202 (77.72%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 2   AKTSLFLILSLLSSLRVTVCH--SEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNG 61
           +K   FLILSLLS   V+V H  SEDPVP PWPLQFHSVLLMNYSGI QII+LWYDWPNG
Sbjct: 16  SKAKFFLILSLLS---VSVRHSISEDPVPTPWPLQFHSVLLMNYSGIPQIINLWYDWPNG 75

Query: 62  RNFNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRH 121
           RNFNIIQHQLGNV+YDLEWNNGTSF YTLDS+KTCS +QLEVGILRPNWLDGA YLG RH
Sbjct: 76  RNFNIIQHQLGNVLYDLEWNNGTSFFYTLDSTKTCSPAQLEVGILRPNWLDGAKYLGQRH 135

Query: 122 VDGFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCF 181
           VDGFLCNVWEKVDFIWYYEDV+TKRPVHWLFYT          VGA+LEDEKWQAPVYCF
Sbjct: 136 VDGFLCNVWEKVDFIWYYEDVETKRPVHWLFYTGRQAHVMTFEVGAVLEDEKWQAPVYCF 195

Query: 182 DGKGAHLHNGVPNHKNLPVIDG 192
           DG G  + N V  H+NLP++ G
Sbjct: 196 DGTGTTV-NDVALHQNLPLMTG 213

[Close]

BLAST of MS003015 vs. ExPASy TrEMBL
Match: A0A1S3CCI7 (uncharacterized protein At4g14100-like OS=Cucumis melo OX=3656 GN=LOC103498893 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86
Identity = 154/200 (77.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 2   AKTSLFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGRN 61
           +K   FLILSLLS+  V+   +EDPVP PWPLQFHS+LLMNYSGILQII+LWYDWPNGRN
Sbjct: 3   SKAKNFLILSLLSA-SVSYSIAEDPVPTPWPLQFHSILLMNYSGILQIINLWYDWPNGRN 62

Query: 62  FNIIQHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHVD 121
           FNI+QHQLG+VVYDLEWNNGTSFVYTLDSSKTCS++QLEVGILRPNWLDGA YLG RHVD
Sbjct: 63  FNIMQHQLGHVVYDLEWNNGTSFVYTLDSSKTCSSAQLEVGILRPNWLDGAKYLGQRHVD 122

Query: 122 GFLCNVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFDG 181
           GFLCNVWEKVDFIWYYEDV+TKRPVHWLFYT          VGA+LEDE WQAPVYCFDG
Sbjct: 123 GFLCNVWEKVDFIWYYEDVETKRPVHWLFYTGRQAHVMTFEVGAVLEDENWQAPVYCFDG 182

Query: 182 KGAHLHNGVPNHKNLPVIDG 192
            G    N V  H+NLP++ G
Sbjct: 183 TGT-TANDVALHQNLPLMGG 200

[Close]

BLAST of MS003015 vs. TAIR 10
Match: AT4G14100.1 (transferases, transferring glycosyl groups )

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-72
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 0


Query: 6   LFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGRNFNII 65
           + +++ +  +  V +  +++PVP PWP QFH+++ MNYSG L +IDLWYDW NGRNFNII
Sbjct: 8   IVIVIFIYITAGVKIAAADEPVPTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNII 67

Query: 66  QHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHVDGFLC 125
           Q QLG + YDLEWNNGTSF YTLD SK+C + QLEVGILRPNWLDGA YLG ++V GFLC
Sbjct: 68  QEQLGGITYDLEWNNGTSFFYTLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLC 127

Query: 126 NVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCFD 171
           NVWEKVDFIWYYEDV+TKRPV W+FYT          VGA+LEDEKWQAPVYCF+
Sbjct: 128 NVWEKVDFIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFN 182

[Close]

BLAST of MS003015 vs. TAIR 10
Match: AT3G23760.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 261.9 bits (668), Expect = 4.1e-70
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 6   LFLILSLLSSLRVTVCHSEDPVPVPWPLQFHSVLLMNYSGILQIIDLWYDWPNGRNFNII 65
           L L+LS+   +       ++PVP  WP QFH+++LMN SG L+I+DLWYDW NGRNFNII
Sbjct: 13  LLLVLSVGDKISAGTEPEKEPVPAVWPEQFHALMLMNKSGSLEIVDLWYDWVNGRNFNII 72

Query: 66  QHQLGNVVYDLEWNNGTSFVYTLDSSKTCSTSQLEVGILRPNWLDGANYLGHRHVDGFLC 125
           Q QLG + YDLEWNNGTSF YTLD+SKTC T   EVGILRPNWLDGA Y+G RHV+GFLC
Sbjct: 73  QKQLGKLTYDLEWNNGTSFYYTLDASKTCRTVHFEVGILRPNWLDGAKYMGQRHVNGFLC 132

Query: 126 NVWEKVDFIWYYEDVDTKRPVHWLFYT----------VGAMLEDEKWQAPVYCF 170
           NVWEKV+F+WYYEDV TKRPV W+FYT          VGA+LEDEKWQAPVYCF
Sbjct: 133 NVWEKVEFLWYYEDVVTKRPVQWIFYTGREAHVMTFEVGAVLEDEKWQAPVYCF 186

The following BLAST results are available for this feature:

BLAST of MS003015 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148937.1	4.7e-116	94.31	uncharacterized protein At4g14100-like [Momordica charantia]	[more]
XP_022991566.1	4.3e-93	78.20	uncharacterized protein At4g14100-like [Cucurbita maxima]	[more]
XP_023548717.1	1.2e-92	77.73	uncharacterized protein At4g14100-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023548718.1	2.8e-92	77.25	uncharacterized protein At4g14100-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6576096.1	1.5e-90	76.78	hypothetical protein SDJN03_26735, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS003015 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67YC9	4.8e-71	66.29	Uncharacterized protein At4g14100 OS=Arabidopsis thaliana OX=3702 GN=At4g14100 P...	[more]

BLAST of MS003015 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6E6	2.3e-116	94.31	uncharacterized protein At4g14100-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1JR40	2.1e-93	78.20	uncharacterized protein At4g14100-like OS=Cucurbita maxima OX=3661 GN=LOC1114881...	[more]
A0A6J1GMU2	2.1e-90	76.30	uncharacterized protein At4g14100-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0KDE7	1.9e-86	77.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091310 PE=4 SV=1	[more]
A0A1S3CCI7	2.4e-86	77.00	uncharacterized protein At4g14100-like OS=Cucumis melo OX=3656 GN=LOC103498893 P...	[more]

BLAST of MS003015 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14100.1	3.4e-72	66.29	transferases, transferring glycosyl groups	[more]
AT3G23760.1	4.1e-70	67.24	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33880:SF3	EXPRESSED PROTEIN	coord: 9..176
IPR038941	At4g14100-like	PANTHER	PTHR33880	EXPRESSED PROTEIN	coord: 9..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003015.1	MS003015.1	mRNA