MS003001 (gene) Bitter gourd (TR) v1

Overview
NameMS003001
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description7-deoxyloganetic acid glucosyltransferase-like
Locationscaffold595_1: 938289 .. 938468 (+)
RNA-Seq ExpressionMS003001
SyntenyMS003001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGGACTAAACCTGCATGTCTTCGCTTGACTCTCAGCCCCCCGATTCATGATTTCGTCAGTTTTGGGAGTACCATGAAAATGGAAGTCGACAAATTGGTGGAGTTCTGGCACGAACGGGTGAATAGCAGCACAAACTTCCTGTGTGTGTTGAGATCCGACGTTGTTAAGAGAAGAGGA

mRNA sequence

TGGAGGACTAAACCTGCATGTCTTCGCTTGACTCTCAGCCCCCCGATTCATGATTTCGTCAGTTTTGGGAGTACCATGAAAATGGAAGTCGACAAATTGGTGGAGTTCTGGCACGAACGGGTGAATAGCAGCACAAACTTCCTGTGTGTGTTGAGATCCGACGTTGTTAAGAGAAGAGGA

Coding sequence (CDS)

TGGAGGACTAAACCTGCATGTCTTCGCTTGACTCTCAGCCCCCCGATTCATGATTTCGTCAGTTTTGGGAGTACCATGAAAATGGAAGTCGACAAATTGGTGGAGTTCTGGCACGAACGGGTGAATAGCAGCACAAACTTCCTGTGTGTGTTGAGATCCGACGTTGTTAAGAGAAGAGGA

Protein sequence

WRTKPACLRLTLSPPIHDFVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKRRG
Homology
BLAST of MS003001 vs. NCBI nr
Match: XP_022151474.1 (7-deoxyloganetic acid glucosyltransferase-like [Momordica charantia])

HSP 1 Score: 73.6 bits (179), Expect = 6.7e-10
Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W+   AC+    S P     FVSFGSTM+M  DKLVEFWH  VNS T FLCVLRSD+V+ 
Sbjct: 268 WKEDQACMSWLDSQPPKSVIFVSFGSTMRMTADKLVEFWHGLVNSGTRFLCVLRSDIVEG 327

BLAST of MS003001 vs. NCBI nr
Match: QWT69383.1 (7-deoxyloganetic acid glucosyltransferase [Gynostemma pentaphyllum])

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-04
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 19  FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVV 57
           +VSFG+  KM+ ++L+EFWH  VNS   FLCVLR DVV
Sbjct: 288 YVSFGTLAKMKSEELIEFWHGLVNSEKPFLCVLRKDVV 325

BLAST of MS003001 vs. NCBI nr
Match: XP_010262685.1 (PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Nelumbo nucifera] >XP_010262687.1 PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Nelumbo nucifera] >XP_010262688.1 PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Nelumbo nucifera] >XP_019053966.1 PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Nelumbo nucifera])

HSP 1 Score: 53.9 bits (128), Expect = 5.5e-04
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W    +C+R   S P+    +VSFGS   M  D+++EFWH  VNS   FL V+R D++ R
Sbjct: 274 WEENKSCIRWLDSKPLRSVVYVSFGSLATMTRDEVLEFWHGLVNSGKPFLWVIRPDLLAR 333

BLAST of MS003001 vs. NCBI nr
Match: DAD28357.1 (TPA_asm: hypothetical protein HUJ06_029825 [Nelumbo nucifera])

HSP 1 Score: 53.9 bits (128), Expect = 5.5e-04
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W    +C+R   S P+    +VSFGS   M  D+++EFWH  VNS   FL V+R D++ R
Sbjct: 100 WEENKSCIRWLDSKPLRSVVYVSFGSLATMTRDEVLEFWHGLVNSGKPFLWVIRPDLLAR 159

BLAST of MS003001 vs. NCBI nr
Match: XP_022151546.1 (7-deoxyloganetic acid glucosyltransferase-like [Momordica charantia])

HSP 1 Score: 53.9 bits (128), Expect = 5.5e-04
Identity = 30/62 (48.39%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W+   A +    S P     FVSFGSTMKME  KL EFW+  VNS + FL V R D V  
Sbjct: 263 WKEDQAYMSWLESQPPRSVIFVSFGSTMKMEAWKLAEFWYGLVNSGSPFLFVFRPDCVIN 322

BLAST of MS003001 vs. ExPASy Swiss-Prot
Match: F8WLS6 (7-deoxyloganetin glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT85A23 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.4e-04
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 0

Query: 1   WRTKPACLRL--TLSPPIHDFVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVV 57
           W+ +P CL    T  P    +V+FGS   M  D+L+EF     NS  NFL ++R D++
Sbjct: 282 WKEEPECLEWLDTKDPNSVVYVNFGSITVMTNDQLIEFAWGLANSKQNFLWIIRPDLI 339

BLAST of MS003001 vs. ExPASy TrEMBL
Match: A0A6J1DD71 (7-deoxyloganetic acid glucosyltransferase-like OS=Momordica charantia OX=3673 GN=LOC111019406 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-10
Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W+   AC+    S P     FVSFGSTM+M  DKLVEFWH  VNS T FLCVLRSD+V+ 
Sbjct: 268 WKEDQACMSWLDSQPPKSVIFVSFGSTMRMTADKLVEFWHGLVNSGTRFLCVLRSDIVEG 327

BLAST of MS003001 vs. ExPASy TrEMBL
Match: A0A1U8ABG5 (Glycosyltransferase OS=Nelumbo nucifera OX=4432 GN=LOC104601152 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-04
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W    +C+R   S P+    +VSFGS   M  D+++EFWH  VNS   FL V+R D++ R
Sbjct: 274 WEENKSCIRWLDSKPLRSVVYVSFGSLATMTRDEVLEFWHGLVNSGKPFLWVIRPDLLAR 333

BLAST of MS003001 vs. ExPASy TrEMBL
Match: A0A6J1DEZ9 (Glycosyltransferase OS=Momordica charantia OX=3673 GN=LOC111019460 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-04
Identity = 30/62 (48.39%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVVKR 60
           W+   A +    S P     FVSFGSTMKME  KL EFW+  VNS + FL V R D V  
Sbjct: 263 WKEDQAYMSWLESQPPRSVIFVSFGSTMKMEAWKLAEFWYGLVNSGSPFLFVFRPDCVIN 322

BLAST of MS003001 vs. ExPASy TrEMBL
Match: A0A6J1DCB1 (7-deoxyloganetic acid glucosyltransferase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019418 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-04
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVV 57
           W+    C+    S P      VSFGS +K++ ++L+E WH  VNS   FLCVLR DVV
Sbjct: 94  WKEDRTCMSWLDSQPPRSVILVSFGSLVKIKENELMEIWHGLVNSGKPFLCVLRPDVV 151

BLAST of MS003001 vs. ExPASy TrEMBL
Match: A0A6J1DD86 (7-deoxyloganetic acid glucosyltransferase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019418 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-04
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 1   WRTKPACLRLTLSPPIHD--FVSFGSTMKMEVDKLVEFWHERVNSSTNFLCVLRSDVV 57
           W+    C+    S P      VSFGS +K++ ++L+E WH  VNS   FLCVLR DVV
Sbjct: 94  WKEDRTCMSWLDSQPPRSVILVSFGSLVKIKENELMEIWHGLVNSGKPFLCVLRPDVV 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151474.16.7e-1058.067-deoxyloganetic acid glucosyltransferase-like [Momordica charantia][more]
QWT69383.14.2e-0460.537-deoxyloganetic acid glucosyltransferase [Gynostemma pentaphyllum][more]
XP_010262685.15.5e-0440.98PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Nelumbo nucifera] >XP... [more]
DAD28357.15.5e-0440.98TPA_asm: hypothetical protein HUJ06_029825 [Nelumbo nucifera][more]
XP_022151546.15.5e-0448.397-deoxyloganetic acid glucosyltransferase-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
F8WLS64.4e-0437.937-deoxyloganetin glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT85A23 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DD713.2e-1058.067-deoxyloganetic acid glucosyltransferase-like OS=Momordica charantia OX=3673 GN... [more]
A0A1U8ABG52.7e-0440.98Glycosyltransferase OS=Nelumbo nucifera OX=4432 GN=LOC104601152 PE=3 SV=1[more]
A0A6J1DEZ92.7e-0448.39Glycosyltransferase OS=Momordica charantia OX=3673 GN=LOC111019460 PE=3 SV=1[more]
A0A6J1DCB14.5e-0444.837-deoxyloganetic acid glucosyltransferase-like isoform X1 OS=Momordica charantia... [more]
A0A6J1DD864.5e-0444.837-deoxyloganetic acid glucosyltransferase-like isoform X2 OS=Momordica charantia... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS003001.1MS003001.1mRNA