MS002999 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCTCCTCAAAGTCTAAATCATAATCAAAATCTTCACGCCGCCACTTATGGTGGCTTTGCCTTCAATATTTTCTCACAGGAAAATACTACTTTGGGTGTGATGAGTCGGTTTGAGGGTTTTAACAATCATCATCATCTTCATCATCATCATGATTCTACTACTAATTCCTTCCTCCCCGAAGAAGATGAATCCACCGGCCCCCATACTCTCAGCGACACGCCTAAGGATGTCCTTCTCCAAGACGCCGCCGATAAGAGCTGGCTCCGCCTTAGCATCGGCGCCGACGACAAACATGATGCAGCTCAACCACTGGATATATTACCTGGCGATGGCGGAGGCGGCTCCAAATTCGGGCTTGAAAACGAGTCGTTTGGCGCGAGGGAGTTTTCGCCTCCGGCCGAGGTTAACTGGAGTTTCACGCCAATGATCTCCCACAACCACAACTCCTCCTCCTCCTGTTCTTCTTTTGTTCCATTTGGGCCCTACTTCTCCAGGCCCTTCCAACTCCACACTGGAATTGACTTAGTCGCCGCGGCGCCACCCGGACCTAGCTCTGATACCATCACAGTTATCGACCCTCCTCACCGGCCCCATTCTGGGATTTGGTTTACGCTTCAACCATTGGAATTCAAGCAGTAATTAAGATCTCAAAAACTCTATTTCCAATACTTAATACCAATCCAACTTCCAACTAACTGAGATTTCTTCTTTTTGGTTTAATTTTGGAAATGCAGAGGGAGTTTTCCTCACAGATCCAGCACCTACTTGAGAATCAAGTATATATGTGTATATTTTTTGTTTACATAAATTCAATATTATTCGTTACCTAGCTTAGCTTCAGCTTGTGGAGCTTTGCATCAGTGTGTAATCTGTTATTAATATAATCTAATTATGGTTTTGATTTTGTCTTTTTGTTGTCCTCAAGGGATGGAAGGATGACAGTTCGATTACTAATCAAGTATCTGGTGAAAAAGCTCAGACTTGATAGCGAATCACAGGTAAACCCTTCTTCTTCCTTTTCCTTTGATTATTGCTGAATAATTTTCGCATCATTTTCTAATTTCTTTTTCCTAAATTATATATCTTCTATGGATCTCTTTGTTTAACCTTTAACCTTAACCTCATCTTCCTTTGCAAGAGGGTTCTCTCTCATTATTTTTTTTTCCCATTTACATTACAAGTATAAAAATACAAAGAAAAGAAAAAACTAAACTTTGTATTATTACTTTGTGTTGAAAATTAAAGCTTTTGTTGTCTTGTCGATATCTGGGGAATTGGGTCTTTTCTCTTCAAACTTGGCCACAAGCTTTTCATTTCTGGTTCGTTATGAATAGGAATGCTTTTTTGTTTTTGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCGAAACNAAAGTGAAAGTTAAGAGAACTAAAAAATGATGGATTAATGAAGTGCAAAACAAAAAACACACCAACCAACAAAACAACCGCTCCCTTTCCCAAAACCTAGAAAATTTATATTACAAATTTATAAACTTACAAGTTAGAAGAGTGCCAGGGTTGCTATTTTAAGAATGAAAGCAACTTCTCTTACTCATTCATAGCTGTTCCTCAACTGCATATAGCGAACACCCAAAGCAACAACCTTAAAAAATCCAAAAAAAAAAAAACAGTCATAACTTTAACGCCTAGGTTATGTTGCAGCTGTAGCTACTACATTTAGAGAGATTCATGAATTGAAGAGAGTTTAAAGATTGCAACATTATTGAAATGTAATGATTTTAGCTATCATATCCATATACATGTTAATACTGCAATGAATTCAAACTACTAAATGCTTTATGATGTGCCCAAATCAACATTATCCCTAGCTAATAGTGTGAAAGATCAGAAGTCTTTGAGTTCATATTCTTAGCTTTTAATTCCGTCTTAATATTCTTCAAACTTTTGGGTTTGATGAGGGTGATTTAACAGTACTATAAAGTGAAGAAATCATATATAACTTTTGTTTTTTTCATATTTTGATGTTTGTTATGTATGTGTGTAGCTATATAGAGGAGGTTATAATAGTTGAGGAGTAGATGAATGATGGTAGATTGGTCACTGAAACAATTGTTGCATTATATTGCTTCTGGTTTACACTTGATGATGAAATACCCACTATTATATGTCTTCTTTCCTAATAATTGCGTTGCCCTAAAAGTTTTCTTACTACGCATTATAAATTTATTTTCATTATTTGTGCCTAAAGTTACCCTAGTTTCGCACGAACGCAAGTTTTTCTCTTTATATACACATCACATATCATACCATATCAATTTCCCTTCTACATTCATTCATTTCAAATTTTTTTTCTTTAAAATAGGAGGAAAAAACCATATCTTGTGACAAACTCCTCAATTCTCCTTTTGAAAGTGGAATATATACAATATAAATATAAAAATCAGGAAGACTTAAATGTTAATGCTTGATTTAATTTCACTATTGACGATTAGCTTAATTAATTATAGACGATTGGTTTTTGTATATATTTGTTATGTTTCGAAATGTTAAATGGTGATATTGTACACGTATAACCCCCAGTTAAAGATATAAATAGACATATTTAATAAGAACGTGAATCATGCATGCATGATCATATGATGTATAAAGTATAAACATGTTAATTATTCCCATGATGATCCTTGAAACACATTTGAATGGAAGGTTTCCTAATTCCTGTTAAGCAAATAATTAATTAACTTGTGATGAAAGGTATATTTGTCTTTATTAATAAAACTAATATTCTAAATTAAAATAAGCAGTATTTTTAGTACATCGATACATGTTAATTAAGCTAAGTTGTGTGTTGGTTACAAATACATATGTGTGATTATTTAGGATAATGTGTGAGATACCCAACATTCCCTTCCATTAAACTAAACCAAAAAATTGTGTGTTAAGTAATTATTGTTTTATTAGAGGTCAACTCTAATTATGGGTTTATGGATGCATAATAGTATTTTTCGTTTGTTGTCTTCTTGCATGCGCTTCATGTCATGAACATACAGCTATTGCATATACCTTATTCTATTGAGAGAGAGAGAAAGAGAAGACTTAGGATAACGGTTGACTAATTAGGGATATAGCTCACATTCTGATCTCCTTCCTTGTACAAATTAAACAAAAGGAAACTCTAAGTCCACCGTTTAAGGTACGAAATTTGTATATCTCCTCCACGTAAACTTTGGGCAATAATTAAAATCCCACCCAACAAAACCCAGAACAACTTACACTTATTAATTATTATGTAGAAATTGATTTTTTACCCGAAGATATTGAAGTAAATAATAATGGATATGGTGTGTTTGTACGTGGCAACTACTTATTGGTATTATATATATTGGAGGACATACAGAGATTGAGAATGGGAGTGGCATGCATGGAAAATGCAGATGGTACTTTTTTTTTTTTTTTTTTCCTTAAATAATAGAGTGAATACATATATAAATTAGGGAAAAGGAAAAGAAAAAGAAGAGGTAGGGAAGGTGAGATTGTGATTGTTTGGTGGTTTCTTATGTCATGCTTGGGTGTGTGCCACCTCAGCCATATTTTAATTTTGTTGTGGAATAAAATTGAGTGAGATGTTAATTAATTAATTGGGTGTTGGTGTTGGTGGTGTGTTCTGTGGGTGCAGATAGAAATAAGGTGCAGAGGGGAAAAGCTGGAACCTTGCTTGACGATGCAGCATATAAGAGACAATATATGGACCTCCAAACACAAAAACTCTCTTACTTTGCTTCCACATTCCTCAACCATTCATCACATTATGGTTCTTCACTACGCC ATGGTTCCTCCTCAAAGTCTAAATCATAATCAAAATCTTCACGCCGCCACTTATGGTGGCTTTGCCTTCAATATTTTCTCACAGGAAAATACTACTTTGGGTGTGATGAGTCGGTTTGAGGGTTTTAACAATCATCATCATCTTCATCATCATCATGATTCTACTACTAATTCCTTCCTCCCCGAAGAAGATGAATCCACCGGCCCCCATACTCTCAGCGACACGCCTAAGGATGTCCTTCTCCAAGACGCCGCCGATAAGAGCTGGCTCCGCCTTAGCATCGGCGCCGACGACAAACATGATGCAGCTCAACCACTGGATATATTACCTGGCGATGGCGGAGGCGGCTCCAAATTCGGGCTTGAAAACGAGTCGTTTGGCGCGAGGGAGTTTTCGCCTCCGGCCGAGGTTAACTGGAGTTTCACGCCAATGATCTCCCACAACCACAACTCCTCCTCCTCCTGTTCTTCTTTTGTTCCATTTGGGCCCTACTTCTCCAGGCCCTTCCAACTCCACACTGGAATTGACTTAGTCGCCGCGGCGCCACCCGGACCTAGCTCTGATACCATCACAGTTATCGACCCTCCTCACCGGCCCCATTCTGGGATTTGGTTTACGCTTCAACCATTGGAATTCAAGCAAGGGAGTTTTCCTCACAGATCCAGCACCTACTTGAGAATCAAGGATGGAAGGATGACAGTTCGATTACTAATCAAGTATCTGGTGAAAAAGCTCAGACTTGATAGCGAATCACAGATAGAAATAAGGTGCAGAGGGGAAAAGCTGGAACCTTGCTTGACGATGCAGCATATAAGAGACAATATATGGACCTCCAAACACAAAAACTCTCTTACTTTGCTTCCACATTCCTCAACCATTCATCACATTATGGTTCTTCACTACGCC ATGGTTCCTCCTCAAAGTCTAAATCATAATCAAAATCTTCACGCCGCCACTTATGGTGGCTTTGCCTTCAATATTTTCTCACAGGAAAATACTACTTTGGGTGTGATGAGTCGGTTTGAGGGTTTTAACAATCATCATCATCTTCATCATCATCATGATTCTACTACTAATTCCTTCCTCCCCGAAGAAGATGAATCCACCGGCCCCCATACTCTCAGCGACACGCCTAAGGATGTCCTTCTCCAAGACGCCGCCGATAAGAGCTGGCTCCGCCTTAGCATCGGCGCCGACGACAAACATGATGCAGCTCAACCACTGGATATATTACCTGGCGATGGCGGAGGCGGCTCCAAATTCGGGCTTGAAAACGAGTCGTTTGGCGCGAGGGAGTTTTCGCCTCCGGCCGAGGTTAACTGGAGTTTCACGCCAATGATCTCCCACAACCACAACTCCTCCTCCTCCTGTTCTTCTTTTGTTCCATTTGGGCCCTACTTCTCCAGGCCCTTCCAACTCCACACTGGAATTGACTTAGTCGCCGCGGCGCCACCCGGACCTAGCTCTGATACCATCACAGTTATCGACCCTCCTCACCGGCCCCATTCTGGGATTTGGTTTACGCTTCAACCATTGGAATTCAAGCAAGGGAGTTTTCCTCACAGATCCAGCACCTACTTGAGAATCAAGGATGGAAGGATGACAGTTCGATTACTAATCAAGTATCTGGTGAAAAAGCTCAGACTTGATAGCGAATCACAGATAGAAATAAGGTGCAGAGGGGAAAAGCTGGAACCTTGCTTGACGATGCAGCATATAAGAGACAATATATGGACCTCCAAACACAAAAACTCTCTTACTTTGCTTCCACATTCCTCAACCATTCATCACATTATGGTTCTTCACTACGCC MVPPQSLNHNQNLHAATYGGFAFNIFSQENTTLGVMSRFEGFNNHHHLHHHHDSTTNSFLPEEDESTGPHTLSDTPKDVLLQDAADKSWLRLSIGADDKHDAAQPLDILPGDGGGGSKFGLENESFGAREFSPPAEVNWSFTPMISHNHNSSSSCSSFVPFGPYFSRPFQLHTGIDLVAAAPPGPSSDTITVIDPPHRPHSGIWFTLQPLEFKQGSFPHRSSTYLRIKDGRMTVRLLIKYLVKKLRLDSESQIEIRCRGEKLEPCLTMQHIRDNIWTSKHKNSLTLLPHSSTIHHIMVLHYA Homology
BLAST of MS002999 vs. NCBI nr
Match: XP_022148945.1 (uncharacterized protein LOC111017490 [Momordica charantia]) HSP 1 Score: 611.3 bits (1575), Expect = 4.5e-171 Identity = 297/302 (98.34%), Postives = 301/302 (99.67%), Query Frame = 0
BLAST of MS002999 vs. NCBI nr
Match: XP_004140650.1 (protein LAX PANICLE 2 [Cucumis sativus] >KGN46419.1 hypothetical protein Csa_005690 [Cucumis sativus]) HSP 1 Score: 289.3 bits (739), Expect = 3.9e-74 Identity = 178/339 (52.51%), Postives = 210/339 (61.95%), Query Frame = 0
BLAST of MS002999 vs. NCBI nr
Match: XP_038875677.1 (protein LAX PANICLE 2-like [Benincasa hispida]) HSP 1 Score: 288.9 bits (738), Expect = 5.1e-74 Identity = 176/316 (55.70%), Postives = 204/316 (64.56%), Query Frame = 0
BLAST of MS002999 vs. NCBI nr
Match: XP_008459904.1 (PREDICTED: uncharacterized protein LOC103498884 [Cucumis melo]) HSP 1 Score: 282.7 bits (722), Expect = 3.7e-72 Identity = 175/337 (51.93%), Postives = 212/337 (62.91%), Query Frame = 0
BLAST of MS002999 vs. NCBI nr
Match: XP_022992476.1 (protein LAX PANICLE 2-like [Cucurbita maxima]) HSP 1 Score: 264.6 bits (675), Expect = 1.0e-66 Identity = 165/309 (53.40%), Postives = 189/309 (61.17%), Query Frame = 0
BLAST of MS002999 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.5e-20 Identity = 97/312 (31.09%), Postives = 132/312 (42.31%), Query Frame = 0
BLAST of MS002999 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 4.9e-11 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of MS002999 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.5e-09 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of MS002999 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.2e-06 Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0
BLAST of MS002999 vs. ExPASy TrEMBL
Match: A0A6J1D4C9 (uncharacterized protein LOC111017490 OS=Momordica charantia OX=3673 GN=LOC111017490 PE=4 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 2.2e-171 Identity = 297/302 (98.34%), Postives = 301/302 (99.67%), Query Frame = 0
BLAST of MS002999 vs. ExPASy TrEMBL
Match: A0A0A0KC58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091920 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74 Identity = 178/339 (52.51%), Postives = 210/339 (61.95%), Query Frame = 0
BLAST of MS002999 vs. ExPASy TrEMBL
Match: A0A1S3CBC6 (uncharacterized protein LOC103498884 OS=Cucumis melo OX=3656 GN=LOC103498884 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 1.8e-72 Identity = 175/337 (51.93%), Postives = 212/337 (62.91%), Query Frame = 0
BLAST of MS002999 vs. ExPASy TrEMBL
Match: A0A6J1JTN5 (protein LAX PANICLE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488795 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 5.0e-67 Identity = 165/309 (53.40%), Postives = 189/309 (61.17%), Query Frame = 0
BLAST of MS002999 vs. ExPASy TrEMBL
Match: A0A6J1GPC0 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455912 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 9.4e-66 Identity = 162/302 (53.64%), Postives = 189/302 (62.58%), Query Frame = 0
BLAST of MS002999 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein ) HSP 1 Score: 144.4 bits (363), Expect = 1.5e-34 Identity = 90/171 (52.63%), Postives = 111/171 (64.91%), Query Frame = 0
BLAST of MS002999 vs. TAIR 10
Match: AT1G28080.1 (RING finger protein ) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-23 Identity = 89/279 (31.90%), Postives = 126/279 (45.16%), Query Frame = 0
BLAST of MS002999 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 ) HSP 1 Score: 70.1 bits (170), Expect = 3.5e-12 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of MS002999 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 ) HSP 1 Score: 70.1 bits (170), Expect = 3.5e-12 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of MS002999 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 ) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-10 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|