MS002998 (gene) Bitter gourd (TR) v1

Overview


Name	MS002998
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein TIFY 9
Location	scaffold595_1: 905352 .. 906045 (-)
RNA-Seq Expression	MS002998
Synteny	MS002998

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAGGCTACTGTGGAGCTCGATTTCTTCGGCCTCCAGAAGGACGCCTCCTCCAACCGATCAACCTTACGAGGTCACTCTCCTTTCCTCTTCCTCTCAACTCTCCTTTTTCATTCTTATTCATCTCTTTTTTTCTTCTGCAGGCATTTCAAAGATCAACCCCGACCTTATCAAATCTCTCATCGGCTCTGCCTCCATTTCCCTGCCTCCTGCTCTCCCTCACTTCATCAGGTCAGTTCTATCTCTCTCTTCTTCTCCCCACTTTCCTTCATCTCATCCTTTGATTTCATCTCTTTTCTCTCTCTCAGGCCGGACTCATCTCCCATGACAATCTTCTACAATGGAACCGTTGCCGTTTTTCACCTTCCTCCTCATAAGGTTGATTACTCATCTCCATCATACCACTTTGCATCACTCCTTCTAATTCTTTCTCGTGTGTAGGCGGAGAGCATTCTCAAACTTGTTGCGGAAGGAAGAGATGAAGCGGATCCAACGCCTGCAGTTCCATCCACCGATCACCACCACCAACACTTGCTTGCCTCTCTCGACGGAGGTCACTTCTCAACTCATTTCTTTTTTCTTTCTCTGCCTTTATTACCATTTCTGTTGTTAATTATATGTTTCTCCTGCAGATCTTCCAATTGCCAGGAAGAAGTCGCTGCAGAGATTCTTGGAGAAGCGTAAGGAGAGG

mRNA sequence

ATGTCTAAGGCTACTGTGGAGCTCGATTTCTTCGGCCTCCAGAAGGACGCCTCCTCCAACCGATCAACCTTACGAGGTCACTCTCCTTTCCTCTTCCTCTCAACTCTCCTTTTTCATTCTTATTCATCTCTTTCTTCTGCAGGCATTTCAAAGATCAACCCCGACCTTATCAAATCTCTCATCGGCTCTGCCTCCATTTCCCTGCCTCCTGCTCTCCCTCACTTCATCAGGTCAGTTCTATCTCTCTCTTCTTCTCCCCACTTTCCTTCATCTCATCCTTTGATTTCATCTCTTTTCTCTCTCTCACCGGACTCATCTCCCATGACAATCTTCTACAATGGAACCGTTGCCGTTTTTCACCTTCCTCCTCATAAGGCGGAGAGCATTCTCAAACTTGTTGCGGAAGGAAGAGATGAAGCGGATCCAACGCCTGCAGTTCCATCCACCGATCACCACCACCAACACTTGCTTGCCTCTCTCGACGGAGATCTTCCAATTGCCAGGAAGAAGTCGCTGCAGAGATTCTTGGAGAAGCGTAAGGAGAGG

Coding sequence (CDS)

ATGTCTAAGGCTACTGTGGAGCTCGATTTCTTCGGCCTCCAGAAGGACGCCTCCTCCAACCGATCAACCTTACGAGGTCACTCTCCTTTCCTCTTCCTCTCAACTCTCCTTTTTCATTCTTATTCATCTCTTTCTTCTGCAGGCATTTCAAAGATCAACCCCGACCTTATCAAATCTCTCATCGGCTCTGCCTCCATTTCCCTGCCTCCTGCTCTCCCTCACTTCATCAGGTCAGTTCTATCTCTCTCTTCTTCTCCCCACTTTCCTTCATCTCATCCTTTGATTTCATCTCTTTTCTCTCTCTCACCGGACTCATCTCCCATGACAATCTTCTACAATGGAACCGTTGCCGTTTTTCACCTTCCTCCTCATAAGGCGGAGAGCATTCTCAAACTTGTTGCGGAAGGAAGAGATGAAGCGGATCCAACGCCTGCAGTTCCATCCACCGATCACCACCACCAACACTTGCTTGCCTCTCTCGACGGAGATCTTCCAATTGCCAGGAAGAAGTCGCTGCAGAGATTCTTGGAGAAGCGTAAGGAGAGG

Protein sequence

MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSLIGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVAVFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRKER

Homology

[Close]

BLAST of MS002998 vs. NCBI nr
Match: XP_022148883.1 (protein TIFY 9 [Momordica charantia])

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-59
Identity = 135/182 (74.18%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKATVELDFFGLQKDASSNRSTLR                      GISKINPDLIKSL
Sbjct: 1   MSKATVELDFFGLQKDASSNRSTLR----------------------GISKINPDLIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVAVFH 120
           IGSASISLPPALPHFIR                         PDSSPMTIFYNGTVAVFH
Sbjct: 61  IGSASISLPPALPHFIR-------------------------PDSSPMTIFYNGTVAVFH 120

Query: 121 LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRK 180
           LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRK
Sbjct: 121 LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRK 135

Query: 181 ER 183
           ER
Sbjct: 181 ER 135

[Close]

BLAST of MS002998 vs. NCBI nr
Match: XP_038906955.1 (protein TIFY 9 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 8.8e-37
Identity = 109/186 (58.60%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           M++ATVELDFFGL+KD SS       H            S+  + SA ISKINP+L+KS+
Sbjct: 1   MARATVELDFFGLEKDTSSKSQFHTLHRK---------RSFRGIHSA-ISKINPELLKSV 60

Query: 61  IGSASISLPP----ALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTV 120
           IGSASISLPP    A  H I S L L +    P+S   +         +SPMTIFYNGTV
Sbjct: 61  IGSASISLPPSPKAAANHNILSPLPLYTPLFRPTSSESLQ-------HTSPMTIFYNGTV 120

Query: 121 AVFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFL 180
           AVF +P  KAE+ILKLVAEG+ EA+PT A PSTD H Q LLASL+GDLPIARKKSLQRFL
Sbjct: 121 AVFDVPRDKAENILKLVAEGKAEANPTVANPSTD-HQQQLLASLNGDLPIARKKSLQRFL 168

Query: 181 EKRKER 183
           EKRKER
Sbjct: 181 EKRKER 168

[Close]

BLAST of MS002998 vs. NCBI nr
Match: XP_022953183.1 (protein TIFY 9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-36
Identity = 109/185 (58.92%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K ASS RS              L H   S+  + SA ISKINP+L+
Sbjct: 1   MARATVELDFFGLEKKASS-RSQFHN----------LLHRKRSFRGIHSA-ISKINPELL 60

Query: 61  KSLIGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVA 120
           KS+IGSASI+LPP       ++LS       P  +PL          +SPMTIFYNGTVA
Sbjct: 61  KSVIGSASIALPPTPKDANHNLLS-----PLPLYNPLFRPTSESLQHTSPMTIFYNGTVA 120

Query: 121 VFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLE 180
           VF +P  KAESILKLVAEG+ EA+PT A+PSTD   Q LLASLDGDLPIARKKSLQRFLE
Sbjct: 121 VFDVPRDKAESILKLVAEGKAEANPTVAIPSTD-RQQQLLASLDGDLPIARKKSLQRFLE 167

Query: 181 KRKER 183
           KRKER
Sbjct: 181 KRKER 167

[Close]

BLAST of MS002998 vs. NCBI nr
Match: XP_022991839.1 (protein TIFY 9-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-36
Identity = 109/185 (58.92%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K ASS RS              L H   S+  + SA ISKINP+L+
Sbjct: 1   MARATVELDFFGLEKKASS-RSQFHN----------LLHRKRSFRGIHSA-ISKINPELL 60

Query: 61  KSLIGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVA 120
           KS+IGSASI+LPP       ++LS       P  +PL          +SPMTIFYNGTVA
Sbjct: 61  KSVIGSASIALPPTPKDANHNLLS-----PLPLYNPLFRPTSESLQHTSPMTIFYNGTVA 120

Query: 121 VFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLE 180
           VF +P  KAESILKLVAEG+ EA+PT A+PSTD   Q LLASLDGDLPIARKKSLQRFLE
Sbjct: 121 VFDVPRDKAESILKLVAEGKAEANPTVAIPSTD-RQQRLLASLDGDLPIARKKSLQRFLE 167

Query: 181 KRKER 183
           KRKER
Sbjct: 181 KRKER 167

[Close]

BLAST of MS002998 vs. NCBI nr
Match: XP_031742393.1 (protein TIFY 9 [Cucumis sativus] >XP_031742394.1 protein TIFY 9 [Cucumis sativus] >KGN46420.1 hypothetical protein Csa_004891 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-36
Identity = 108/189 (57.14%), Postives = 131/189 (69.31%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K+ASS     + HS        L H   S+  + +A ISKI+P L+
Sbjct: 1   MARATVELDFFGLEKEASSKS---QFHS--------LLHRKRSFRGIHNA-ISKIDPQLL 60

Query: 61  KSLIGSASISLPP----ALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYN 120
           KS+IGSASISLPP    A  H + S L L +  + P++   +         +S MTIFYN
Sbjct: 61  KSVIGSASISLPPTPEAAANHNVLSPLPLYTPLYRPTASESLQ-------HTSQMTIFYN 120

Query: 121 GTVAVFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQ 180
           GTVAVF +P  KAE+ILKLVAEG+ E +PT A+PSTD H QHLLASLDGDLPIARKKSLQ
Sbjct: 121 GTVAVFDVPRDKAENILKLVAEGKAEGNPTVAIPSTD-HQQHLLASLDGDLPIARKKSLQ 169

Query: 181 RFLEKRKER 183
           RFLEKRKER
Sbjct: 181 RFLEKRKER 169

[Close]

BLAST of MS002998 vs. ExPASy Swiss-Prot
Match: Q93ZM9 (Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-17
Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKAT+ELDF GL+K  ++N    +      FL      S+  +  A ISKI+P++IKSL
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQK---FLDRR--RSFRDIQGA-ISKIDPEIIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSL--SSSPHFPSSHPLISSLFSLSPD----SSPMTIFYNG 120
           + S   +   +     RSV S      P  P S P+ +SL   S +    + PMTIFYNG
Sbjct: 61  LASTGNNSDSSAKS--RSVPSTPREDQPQIPIS-PVHASLARSSTELVSGTVPMTIFYNG 120

Query: 121 TVAVFHLPPHKAESILKLVAEGRDEADPT------PAVPSTDHHHQHLLASLDGDLPIAR 180
           +V+VF +  +KA  I+K+  E   + D +        +  T    +    +L+GDLPIAR
Sbjct: 121 SVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIAR 180

Query: 181 KKSLQRFLEKRKER 183
           +KSLQRFLEKRKER
Sbjct: 181 RKSLQRFLEKRKER 185

[Close]

BLAST of MS002998 vs. ExPASy Swiss-Prot
Match: Q7XV97 (Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 2   SKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSLI 61
           ++A VELDF GL+  A+                    H+ S  SSA  S        S+ 
Sbjct: 3   TRAPVELDFLGLRAAAADADDR---------------HAKSGGSSASSS-------SSIR 62

Query: 62  GSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVAVFHL 121
           G  + ++    PH +R V++ +  P  PS+ P+   +   +  ++PMT+FYNG+VAVF +
Sbjct: 63  GMETSAIARIGPHLLRRVIAAAGPPPPPSTAPVPEEMPGAAAAAAPMTLFYNGSVAVFDV 122

Query: 122 PPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRKE 181
              KAE+I+++  E         A  +      + +       P+ R KSLQRFL KRKE
Sbjct: 123 SHDKAEAIMRMATE---------ATKAKGLARGNAIVGNFAKEPLTRTKSLQRFLSKRKE 152

Query: 182 R 183
           R
Sbjct: 183 R 152

[Close]

BLAST of MS002998 vs. ExPASy Swiss-Prot
Match: A2XSX6 (Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-10
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 2   SKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSLI 61
           ++A VELDF GL+  A+                    H+ S  SSA  S        S+ 
Sbjct: 3   TRAPVELDFLGLRAAAADADDR---------------HAKSGGSSASSS-------SSIR 62

Query: 62  GSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVAVFHL 121
           G  + ++    PH +R V++ +  P  PS+ P+   +   +  ++PMT+FYNG+VAVF +
Sbjct: 63  GMETSAIARIGPHLLRRVIAAARPPPPPSTAPVPEEMPGAAAAAAPMTLFYNGSVAVFDV 122

Query: 122 PPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRKE 181
              KAE+I+++  E         A  +      + +       P+ R KSLQRFL KRKE
Sbjct: 123 SHDKAEAIMRMATE---------ATKAKGLARGNAIVGNFAKEPLTRTKSLQRFLSKRKE 152

Query: 182 R 183
           R
Sbjct: 183 R 152

[Close]

BLAST of MS002998 vs. ExPASy Swiss-Prot
Match: A2Z6V6 (Protein TIFY 11e OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11E PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-06
Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 102 SPDSSPMTIFYNGTVAVF-HLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASL 161
           S  ++ MTIFY G V V    P  +A ++L+L A  R        VP  D       A  
Sbjct: 66  SSAAAQMTIFYGGRVLVLDECPADRAAALLRLAASSR-------GVPRDDLASTAAAAGE 125

Query: 162 DGDLPIARKKSLQRFLEKRKER 183
             DLP+ARK SLQRF+EKRK R
Sbjct: 126 SADLPVARKASLQRFMEKRKGR 140

[Close]

BLAST of MS002998 vs. ExPASy Swiss-Prot
Match: Q7XEZ6 (Protein TIFY 11e OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11E PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-06
Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 102 SPDSSPMTIFYNGTVAVF-HLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASL 161
           S  ++ MTIFY G V V    P  +A ++L+L A  R        VP  D       A  
Sbjct: 66  SSAAAQMTIFYGGRVLVLDECPADRAAALLRLAASSR-------GVPRDDLASTAAAAGE 125

Query: 162 DGDLPIARKKSLQRFLEKRKER 183
             DLP+ARK SLQRF+EKRK R
Sbjct: 126 SADLPVARKASLQRFMEKRKGR 140

[Close]

BLAST of MS002998 vs. ExPASy TrEMBL
Match: A0A6J1D5B5 (protein TIFY 9 OS=Momordica charantia OX=3673 GN=LOC111017446 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.9e-60
Identity = 135/182 (74.18%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKATVELDFFGLQKDASSNRSTLR                      GISKINPDLIKSL
Sbjct: 1   MSKATVELDFFGLQKDASSNRSTLR----------------------GISKINPDLIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVAVFH 120
           IGSASISLPPALPHFIR                         PDSSPMTIFYNGTVAVFH
Sbjct: 61  IGSASISLPPALPHFIR-------------------------PDSSPMTIFYNGTVAVFH 120

Query: 121 LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRK 180
           LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRK
Sbjct: 121 LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLEKRK 135

Query: 181 ER 183
           ER
Sbjct: 181 ER 135

[Close]

BLAST of MS002998 vs. ExPASy TrEMBL
Match: A0A6J1JVY1 (protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37
Identity = 109/185 (58.92%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K ASS RS              L H   S+  + SA ISKINP+L+
Sbjct: 1   MARATVELDFFGLEKKASS-RSQFHN----------LLHRKRSFRGIHSA-ISKINPELL 60

Query: 61  KSLIGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVA 120
           KS+IGSASI+LPP       ++LS       P  +PL          +SPMTIFYNGTVA
Sbjct: 61  KSVIGSASIALPPTPKDANHNLLS-----PLPLYNPLFRPTSESLQHTSPMTIFYNGTVA 120

Query: 121 VFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLE 180
           VF +P  KAESILKLVAEG+ EA+PT A+PSTD   Q LLASLDGDLPIARKKSLQRFLE
Sbjct: 121 VFDVPRDKAESILKLVAEGKAEANPTVAIPSTD-RQQRLLASLDGDLPIARKKSLQRFLE 167

Query: 181 KRKER 183
           KRKER
Sbjct: 181 KRKER 167

[Close]

BLAST of MS002998 vs. ExPASy TrEMBL
Match: A0A6J1GMQ1 (protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455800 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37
Identity = 109/185 (58.92%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K ASS RS              L H   S+  + SA ISKINP+L+
Sbjct: 1   MARATVELDFFGLEKKASS-RSQFHN----------LLHRKRSFRGIHSA-ISKINPELL 60

Query: 61  KSLIGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVA 120
           KS+IGSASI+LPP       ++LS       P  +PL          +SPMTIFYNGTVA
Sbjct: 61  KSVIGSASIALPPTPKDANHNLLS-----PLPLYNPLFRPTSESLQHTSPMTIFYNGTVA 120

Query: 121 VFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQRFLE 180
           VF +P  KAESILKLVAEG+ EA+PT A+PSTD   Q LLASLDGDLPIARKKSLQRFLE
Sbjct: 121 VFDVPRDKAESILKLVAEGKAEANPTVAIPSTD-RQQQLLASLDGDLPIARKKSLQRFLE 167

Query: 181 KRKER 183
           KRKER
Sbjct: 181 KRKER 167

[Close]

BLAST of MS002998 vs. ExPASy TrEMBL
Match: A0A0A0K9H7 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091930 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 108/189 (57.14%), Postives = 131/189 (69.31%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K+ASS     + HS        L H   S+  + +A ISKI+P L+
Sbjct: 1   MARATVELDFFGLEKEASSKS---QFHS--------LLHRKRSFRGIHNA-ISKIDPQLL 60

Query: 61  KSLIGSASISLPP----ALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYN 120
           KS+IGSASISLPP    A  H + S L L +  + P++   +         +S MTIFYN
Sbjct: 61  KSVIGSASISLPPTPEAAANHNVLSPLPLYTPLYRPTASESLQ-------HTSQMTIFYN 120

Query: 121 GTVAVFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDGDLPIARKKSLQ 180
           GTVAVF +P  KAE+ILKLVAEG+ E +PT A+PSTD H QHLLASLDGDLPIARKKSLQ
Sbjct: 121 GTVAVFDVPRDKAENILKLVAEGKAEGNPTVAIPSTD-HQQHLLASLDGDLPIARKKSLQ 169

Query: 181 RFLEKRKER 183
           RFLEKRKER
Sbjct: 181 RFLEKRKER 169

[Close]

BLAST of MS002998 vs. ExPASy TrEMBL
Match: A0A6J1JXF0 (protein TIFY 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 109/186 (58.60%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFH---SYSSLSSAGISKINPDLI 60
           M++ATVELDFFGL+K ASS RS              L H   S+  + SA ISKINP+L+
Sbjct: 1   MARATVELDFFGLEKKASS-RSQFHN----------LLHRKRSFRGIHSA-ISKINPELL 60

Query: 61  KSLIGSASISLPPALPHFIRSVLSLSSSPHFPSSHPLISSLFSLSPDSSPMTIFYNGTVA 120
           KS+IGSASI+LPP       ++LS       P  +PL          +SPMTIFYNGTVA
Sbjct: 61  KSVIGSASIALPPTPKDANHNLLS-----PLPLYNPLFRPTSESLQHTSPMTIFYNGTVA 120

Query: 121 VFHLPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLLASLDG-DLPIARKKSLQRFL 180
           VF +P  KAESILKLVAEG+ EA+PT A+PSTD   Q LLASLDG DLPIARKKSLQRFL
Sbjct: 121 VFDVPRDKAESILKLVAEGKAEANPTVAIPSTD-RQQRLLASLDGADLPIARKKSLQRFL 168

Query: 181 EKRKER 183
           EKRKER
Sbjct: 181 EKRKER 168

[Close]

BLAST of MS002998 vs. TAIR 10
Match: AT5G13220.2 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-18
Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKAT+ELDF GL+K  ++N    +      FL      S+  +  A ISKI+P++IKSL
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQK---FLDRR--RSFRDIQGA-ISKIDPEIIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSL--SSSPHFPSSHPLISSLFSLSPD----SSPMTIFYNG 120
           + S   +   +     RSV S      P  P S P+ +SL   S +    + PMTIFYNG
Sbjct: 61  LASTGNNSDSSAKS--RSVPSTPREDQPQIPIS-PVHASLARSSTELVSGTVPMTIFYNG 120

Query: 121 TVAVFHLPPHKAESILKLVAEGRDEADPT------PAVPSTDHHHQHLLASLDGDLPIAR 180
           +V+VF +  +KA  I+K+  E   + D +        +  T    +    +L+GDLPIAR
Sbjct: 121 SVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIAR 180

Query: 181 KKSLQRFLEKRKER 183
           +KSLQRFLEKRKER
Sbjct: 181 RKSLQRFLEKRKER 185

[Close]

BLAST of MS002998 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-18
Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKAT+ELDF GL+K  ++N    +      FL      S+  +  A ISKI+P++IKSL
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQK---FLDRR--RSFRDIQGA-ISKIDPEIIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSL--SSSPHFPSSHPLISSLFSLSPD----SSPMTIFYNG 120
           + S   +   +     RSV S      P  P S P+ +SL   S +    + PMTIFYNG
Sbjct: 61  LASTGNNSDSSAKS--RSVPSTPREDQPQIPIS-PVHASLARSSTELVSGTVPMTIFYNG 120

Query: 121 TVAVFHLPPHKAESILKLVAEGRDEADPT------PAVPSTDHHHQHLLASLDGDLPIAR 180
           +V+VF +  +KA  I+K+  E   + D +        +  T    +    +L+GDLPIAR
Sbjct: 121 SVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIAR 180

Query: 181 KKSLQRFLEKRKER 183
           +KSLQRFLEKRKER
Sbjct: 181 RKSLQRFLEKRKER 185

[Close]

BLAST of MS002998 vs. TAIR 10
Match: AT5G13220.3 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-18
Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKAT+ELDF GL+K  ++N    +      FL      S+  +  A ISKI+P++IKSL
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQK---FLDRR--RSFRDIQGA-ISKIDPEIIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSL--SSSPHFPSSHPLISSLFSLSPD----SSPMTIFYNG 120
           + S   +   +     RSV S      P  P S P+ +SL   S +    + PMTIFYNG
Sbjct: 61  LASTGNNSDSSAKS--RSVPSTPREDQPQIPIS-PVHASLARSSTELVSGTVPMTIFYNG 120

Query: 121 TVAVFHLPPHKAESILKLVAEGRDEADPT------PAVPSTDHHHQHLLASLDGDLPIAR 180
           +V+VF +  +KA  I+K+  E   + D +        +  T    +    +L+GDLPIAR
Sbjct: 121 SVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIAR 180

Query: 181 KKSLQRFLEKRKER 183
           +KSLQRFLEKRKER
Sbjct: 181 RKSLQRFLEKRKER 185

[Close]

BLAST of MS002998 vs. TAIR 10
Match: AT5G13220.4 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 1   MSKATVELDFFGLQKDASSNRSTLRGHSPFLFLSTLLFHSYSSLSSAGISKINPDLIKSL 60
           MSKAT+ELDF GL+K  ++N    +      FL      S+  +  A ISKI+P++IKSL
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQK---FLDRR--RSFRDIQGA-ISKIDPEIIKSL 60

Query: 61  IGSASISLPPALPHFIRSVLSL--SSSPHFPSSHPLISSLFSLSPD----SSPMTIFYNG 120
           + S   +   +     RSV S      P  P S P+ +SL   S +    + PMTIFYNG
Sbjct: 61  LASTGNNSDSSAKS--RSVPSTPREDQPQIPIS-PVHASLARSSTELVSGTVPMTIFYNG 120

Query: 121 TVAVFHLPPHKAESILKLVAEGRDEAD 142
           +V+VF +  +KA  I+K+  E   + D
Sbjct: 121 SVSVFQVSRNKAGEIMKVANEAASKKD 138

[Close]

BLAST of MS002998 vs. TAIR 10
Match: AT3G43440.1 (jasmonate-zim-domain protein 11 )

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-07
Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 100 SLSPD-SSPMTIFYNGTVAVFH-LPPHKAESILKLVAEGRDEADPTPAVPSTDHHHQHLL 159
           S  PD S+ +TI + G+  VF+ +P  K + I+++   G+   + T   P+    ++ L 
Sbjct: 37  STEPDASTQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGKQTKNVTGINPAL---NRALS 96

Query: 160 ASLDGDLPIARKKSLQRFLEKRKER 183
            S   DLPIAR++SLQRFLEKR++R
Sbjct: 97  FSTVADLPIARRRSLQRFLEKRRDR 118

The following BLAST results are available for this feature:

BLAST of MS002998 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148883.1	1.6e-59	74.18	protein TIFY 9 [Momordica charantia]	[more]
XP_038906955.1	8.8e-37	58.60	protein TIFY 9 [Benincasa hispida]	[more]
XP_022953183.1	1.1e-36	58.92	protein TIFY 9-like isoform X2 [Cucurbita moschata]	[more]
XP_022991839.1	1.1e-36	58.92	protein TIFY 9-like isoform X2 [Cucurbita maxima]	[more]
XP_031742393.1	3.3e-36	57.14	protein TIFY 9 [Cucumis sativus] >XP_031742394.1 protein TIFY 9 [Cucumis sativus...	[more]

BLAST of MS002998 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZM9	4.7e-17	39.69	Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1	[more]
Q7XV97	3.3e-10	30.94	Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1	[more]
A2XSX6	4.3e-10	30.94	Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1	[more]
A2Z6V6	6.4e-06	42.68	Protein TIFY 11e OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11E PE=3 SV=1	[more]
Q7XEZ6	6.4e-06	42.68	Protein TIFY 11e OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11E PE=2 SV=1	[more]

BLAST of MS002998 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5B5	7.9e-60	74.18	protein TIFY 9 OS=Momordica charantia OX=3673 GN=LOC111017446 PE=3 SV=1	[more]
A0A6J1JVY1	5.5e-37	58.92	protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 ...	[more]
A0A6J1GMQ1	5.5e-37	58.92	protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455800 PE=...	[more]
A0A0A0K9H7	1.6e-36	57.14	Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091930 PE=3 S...	[more]
A0A6J1JXF0	1.4e-35	58.60	protein TIFY 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 ...	[more]

BLAST of MS002998 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13220.2	3.3e-18	39.69	jasmonate-zim-domain protein 10	[more]
AT5G13220.1	3.3e-18	39.69	jasmonate-zim-domain protein 10	[more]
AT5G13220.3	3.3e-18	39.69	jasmonate-zim-domain protein 10	[more]
AT5G13220.4	1.3e-09	37.41	jasmonate-zim-domain protein 10	[more]
AT3G43440.1	4.5e-07	38.82	jasmonate-zim-domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 101..135 e-value: 2.1E-7 score: 40.6
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 103..133 e-value: 1.2E-11 score: 43.7
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 101..135 score: 12.470434
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	Jas_motif	coord: 165..182 e-value: 1.2E-9 score: 37.8
None	No IPR available	PANTHER	PTHR33077:SF5	PROTEIN TIFY 9	coord: 48..182
IPR040390	TIFY/JAZ family	PANTHER	PTHR33077	PROTEIN TIFY 4A-RELATED-RELATED	coord: 48..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002998.1	MS002998.1	mRNA