MS002968 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAGGTATCGTTGGCTCAGTTCTGGCAAAAGAAGGACGCCTGCCATATGTATCCGATTTTGTCTCGGGTGCTTTTAAGGTATTCTTCTATTTGAAAACTTGCTTCTTAGTTCTTATTTCCGATGTATAGTAGAAATTTTTAGTTTTGGATTTTGTTTGAGACTTTCCAATTCACTATGAACTTTTTGATAACTCCCGGTTAAGAGAGCGAGTGAGGTATGCACTGCATATTTGTCTTCCCTTCTGTCTACATACCTGTCAGCCAACCAGTATATTTTTCCCCTAACCTCTCCTTAATTGTTTATATTCCTGTTCATTTTTTATGTCTCAAATTTTCTGTTGGCTTCTATTAACAGATTGCTCTAAAGCGTATGAGTCGAGATGACTCTAGCACTTCAAAAAGCAAGCCTCGGAATGAATCTTTAATGGCTCAGGTGTGTTTCTTAAACTGGTTTATTGAATATAATGAATTTAATTTTTAGTTGTTTTGTACGATTGCTAATAGCTATGATCCTCAATGAAGGGAAATTTCCGACTGTTCTCTCTCTTTTCATTAATATTTTCCTTCAGATTTGAAATTCATCTCTATTCTAAGCTTCTTTCAGCAACCTTTTCACTGGCATATTTCTACGCGCTAATTTTATGATTTTTATTGAATAGATTCTGTTTTTTGTACCTTGTTAATGTTTACCATGTTTGCTTCTTACATATTCATGAAACTTTTACTCTTCAGATTTTATTTTGAAGTGGAAAATATTTGCACTAATAAAGCATGTTTAGGTTGCTGACTGTTCAACAACTGAATGGCTGGACAATTTTAAATTGGAGGGCATGTTTTCATCTTGTGAAGAATCCAAAGATGTGCCTCTCACTGCAGCCATAACTTTGACTTGAAACAGCTCATTATAACTTTCTTTATGTTTTCTTCAAACTTTCCTAAACCAAGAGGTTACTTGAGTGTCCCCGACACTAAAATGATAATTAGGTACCATAATGGCAATTTATGGCACATTCAAAATTGGATAGCTAGGAAAAGCAGAAGTATTCTGCTAATTTCGAAGTCCTATGATTACCCCTCAATTTTTTATCCATTAGTTTTTGTGAACATACATCTAGAAATGTATAATTTTTGTTGTACTGTTCTTTAATTGCTTTATTGTTTTCTTATGCGGGATCTGCAAGAACTCTAAAATCTAATTGTCTACTTTTATTGGTTTTTCATCCCTTCTCTATTGTTCCGTGGCTGATAATATTATTGCTTTTCGTAATTTCAATGGATGGTCTTCAAAGGAATCATACTTTATTTTGTTTTAATTTGAGTAAATTTTCTGAAAAGGTCAGTATCCACCTTATTTTGCAATATTTTATTTTTTTCTGTTGTTGCAACTTGAATACGTTTTACCATGATAATTTCATTTGCCAGTCACCTTATTATGTTCAAATTATTATTTTTGTTCCTTGAATGCCCCTGGACAAGGAAAGCAATTGGCTAAATGCATTTAACACATCTACAGGTAAAAAGCTTACAGCAGGAACTGCAAATGTTAGCATCAAATCGTTCAATGACAATTGTGACCAATGGCGGGACAGGTGTTGATGATGTTTCCTTGTTTGTTTCTTTAGATATTAATGTAGATAGCTTCATGGTTCTTTTATCATCAAATGTTTTTTGTTTTCCCTTTAGTTTTTTTATTTTTAGAAGTTATTTCTAAAAAAAATATAAAAAACAACCAAGTTCCAACTTTGCAAATTAAAAATTCCCCTTGAAACATTTTTTTTGTTAATTATAACTTATAACGGAGGTTTATGTGACCTATGCCAACTGGGGTCCTTTGCAAATCTTGGGGATGCCTCAGCTCTCCTTTTTTTCCTCTTTGAGATATTAGTAAAAGTTTCCTTTCCTTAAAAAAACAGTTGAAGGCTTATCAGTAAGTTGGGTTGGCGTCGGTATATGATTTTGCCTGTTTAGAAGGATGTTTTTTCTGAAGATCCTGCTGCAGTTTTGTTTGAGAAGCATTTTCCTTTTTCTTATTGCTTTAAGAAGGTTTCAGTTTTCTATGTAAAGATATGGCAAGAAATTTCTAACCTAATGTTTACCCATGATGGCATTTTGTAACTTTTCTCTGATTAATTTTCTGTGCTTCTAGTTTTCTTTTAAGACATCTGTTAAGAAAACCTTAGGACGTCCATTGTTTAAGATTTTTAATTTATTATGTAATTGCTGCTGCCTTTATATAATGATTAATAATGAGTGCTTTCTGTGTAGATATAAATTGTGTGGTTGTTTGTATTATTATTTTGTTAATATCTAACTTAAATTTGAGGTGGCTATTAATTCACAATGAGACTTTCTTGTCAGCGACTGCATTTTATTTTTTTTGGTTTCATATTTCTTCTCTTTAATTTTCTTACCTCAATCTTCTTTTTTTGTATGCCAGGGGGTAGGAAATATGGCATTGTCATTCTTGTCGTTGTAGTAGGATATGGGGTCGTTTGGATTAAGGTAATTGTGTGGTTGGTTCGTTTGGGGCAAATTGTGCTGTGATAACATATTATATTCCCTGCTAAATTCAAAAGTTTAAAACAACAGTTAGGATATATTTAACCTTTGTAATATATTTTTACACCAAGTCTTGGTAATATTTTCCATAGAACCAAAATGGAATATTTTAGTGGTGTAGCACTAGCCTACAATTTCCTCTCCTTGATCCCATGTCGTATTTGAATGTGGATGTTGCAATTTACAATTGTTTGCCTCTTTAGAACCTTCTATCATATAATGACACAGTACAAGTATGTTTTCAGGGATGGAAACTTCCTGATATGATGTTTGCTACAAAGCGTAGTCTATCTGATGCTTGCAGTTCCGTTGCTAGGCAGCTTGAGAGTGTTTACTCATCCATTTCGGTAATATCTTATTGTCTCAATGTACTATTTATACATAACAGCATTTTTAACATAATTTTCGAGCTTGCAAGATGCTTTTGAAATTCACATAAATGACTGAACTCTGAACCTTCAATGTCGATCCGATTTTATTAGGAAATTTTTGTTTATTTTCGGTGAATCAATGATTTAATTGCTTTCCCTGCTATGTGATTGTCCAGGCTACAAAACGGAATTTATCTTCAAAAATGGATCATGTGGACAAAAGTTTGGACGAATCTTTGGATCTCACTGCTGAGACACAAGAAAAGGCGCGTAACTGAAAACCGAATGGTTTTTGCTAATAGTTAAAAGAATTGATTGTTTTTTTTTCTTATGATGGAAGGTTTAAATATCATTTACTGAAACTGAACTTTTTTTCTTTTGCCCTAAAGGTCTCAGAACTACGAGGTAAGTCAGATACTTTTGGCAGGGATATTAAATCCGTTCATCATGCAGTCCAGAATTTGGTAACTACTTTTCCTTTTATTATTCTTTCTTTGTAATTTATCTCTAAACTTTGAATTGAAGACTGACCCGTTCCTTGTATGTTTTAGGAAAATAAACTTTGGAGTTTTGAAGAAAAGCAGGTGAACCTTCTTTTCTATACAGTTTCATTGCAATATTTTGTTTAATGTTTATATTGTTTTACTGCAATTCCCAGCACATGTAGACACCTTCGAAATTGGTGTTTTATGATTGTTTTGCCTTTTGATTCTTTGCTTAGGACCTAACAAATGAAGGTGTTAGGAGATTGTGTAATTATGCTTGGAACATGGAGAATCGAAGGACCACGGAACGTGTACAGGCATGCATCAAACCCCTTATTTTTCTTTCAAATAAACCCTTTTTTTTTGGGGGGGGGGGGTTCTTGCATCTCTTGTGGTAGAAATTTAAACTTCCTCTAGTCATCGATTTGAGAAAAATGTGGGTGATTTGGGATGAATGCAACACCAGGATCTTTCAAGACAAAGAAAAGACTATGGAAGGCCTTTTTGATGTAATCCTTTTTATGGCTCTTCATTGGTGCAAAAAATGAACACCCCTTTAGTCATTACAGTTTAAATTCTCTCCTATCCAATTGGAGAAGATTTTTATACTCCTTTTGTAACATTTCATATCATCAATAAAATTGTTTCCTATCCAAAACATTTACAATTGCATCAATGAGATCTGAAAGTACAACTCTTCAAATACATACAAATATTTACATTTTTTTTAATGTTATTGTGGATTTTGCAGGCAATTCCTTCTAGTTCCTCTCGGCCTTCTCTTGAACTCCCTCCAACAACACCTTCACCAAAGGTAATTGAGCATCTACCTGTCGCTTTGATAATGATTTTATGAAATACTATCAGAATGGTGATAGATAGGCTTAGAGATCACAACTTGATTGTGCATACTCTCACTATTTAATTTTCTGATCCTTGTCAGCAAAATCGGCCATTGCCGATTGGTTTTTCACCAGAAGCGCTGTCTCCCTCCGAATCTAATCCTTCTCCGAACCAGGTTAGTTAATTTTACCCATGCAAGAGATAATAGTTTTTGTCTTTTGAAACAACTACCCCAGGGGCTATGGGGATTACCTTATTTTGGATATTAAAATTGCTTTTAGACAACCGGATCCGGCGGTAGTCTCAAACGAGAGATTAGTCGAGGTACTTGTAAGCTACTAACGTCAAGAAAAAAGAAACACCATTTTCTCACTTACCTATTTGTGAAAGGCTTGTTCAGTTGTATGCTTAGATTTTTATCTGATCAGGCTTTTTCTTGTGTTTTATTGAAGAGAGAGAGCACATTATGAGTTTGGCTTGTGTCTATTATGCTGTCATAACTTACCAAAATAATCTCCCTTTTCGCTATAATTGAATCTCAGGTTCAACGGCAATCCCTCCAAAGTGCTGAATCTCAGATTCAACCGCGATCCCTCCAAAGTGCCGTCTCGGACCCTGGCTTGATGGTTGTCCTACACTCCAAATTCGTTTCGTAACGTCGATATCAATACAGTCATCTATAAGTTTCTAACAACTGTTTGTGTATGCCTGGCAGTTAAATGGAGCTACGATTGTAAACACGCCATCGAGCAGCAGCAGCATCGATAAAACACCCAATGGTAGCAGCAGTACATCGGATTCCCCCAAGAGCGAGGTCGGGAATCCCGGTCTTTCTGGACTCGGATTTCTTACCAGAACGAGGAGCGCGATGAGTGCAGTGTTCCGGCAGGCTCGCCCGAGTATTCAATCC TCAGGTATCGTTGGCTCAGTTCTGGCAAAAGAAGGACGCCTGCCATATGTATCCGATTTTGTCTCGGGTGCTTTTAAGATTGCTCTAAAGCGTATGAGTCGAGATGACTCTAGCACTTCAAAAAGCAAGCCTCGGAATGAATCTTTAATGGCTCAGGTAAAAAGCTTACAGCAGGAACTGCAAATGTTAGCATCAAATCGTTCAATGACAATTGTGACCAATGGCGGGACAGGGGGTAGGAAATATGGCATTGTCATTCTTGTCGTTGTAGTAGGATATGGGGTCGTTTGGATTAAGGGATGGAAACTTCCTGATATGATGTTTGCTACAAAGCGTAGTCTATCTGATGCTTGCAGTTCCGTTGCTAGGCAGCTTGAGAGTGTTTACTCATCCATTTCGGCTACAAAACGGAATTTATCTTCAAAAATGGATCATGTGGACAAAAGTTTGGACGAATCTTTGGATCTCACTGCTGAGACACAAGAAAAGGCGCAACTACGAGGTAAGTCAGATACTTTTGGCAGGGATATTAAATCCGTTCATCATGCAGTCCAGAATTTGGAAAATAAACTTTGGAGTTTTGAAGAAAAGCAGGACCTAACAAATGAAGGTGTTAGGAGATTGTGTAATTATGCTTGGAACATGGAGAATCGAAGGACCACGGAACGTGCAATTCCTTCTAGTTCCTCTCGGCCTTCTCTTGAACTCCCTCCAACAACACCTTCACCAAAGCAAAATCGGCCATTGCCGATTGGTTTTTCACCAGAAGCGCTGTCTCCCTCCGAATCTAATCCTTCTCCGAACCAGATTCAACCGCGATCCCTCCAAAGTGCCGTCTCGGACCCTGGCTTGATGTTAAATGGAGCTACGATTGTAAACACGCCATCGAGCAGCAGCAGCATCGATAAAACACCCAATGGTAGCAGCAGTACATCGGATTCCCCCAAGAGCGAGGTCGGGAATCCCGGTCTTTCTGGACTCGGATTTCTTACCAGAACGAGGAGCGCGATGAGTGCAGTGTTCCGGCAGGCTCGCCCGAGTATTCAATCC TCAGGTATCGTTGGCTCAGTTCTGGCAAAAGAAGGACGCCTGCCATATGTATCCGATTTTGTCTCGGGTGCTTTTAAGATTGCTCTAAAGCGTATGAGTCGAGATGACTCTAGCACTTCAAAAAGCAAGCCTCGGAATGAATCTTTAATGGCTCAGGTAAAAAGCTTACAGCAGGAACTGCAAATGTTAGCATCAAATCGTTCAATGACAATTGTGACCAATGGCGGGACAGGGGGTAGGAAATATGGCATTGTCATTCTTGTCGTTGTAGTAGGATATGGGGTCGTTTGGATTAAGGGATGGAAACTTCCTGATATGATGTTTGCTACAAAGCGTAGTCTATCTGATGCTTGCAGTTCCGTTGCTAGGCAGCTTGAGAGTGTTTACTCATCCATTTCGGCTACAAAACGGAATTTATCTTCAAAAATGGATCATGTGGACAAAAGTTTGGACGAATCTTTGGATCTCACTGCTGAGACACAAGAAAAGGCGCAACTACGAGGTAAGTCAGATACTTTTGGCAGGGATATTAAATCCGTTCATCATGCAGTCCAGAATTTGGAAAATAAACTTTGGAGTTTTGAAGAAAAGCAGGACCTAACAAATGAAGGTGTTAGGAGATTGTGTAATTATGCTTGGAACATGGAGAATCGAAGGACCACGGAACGTGCAATTCCTTCTAGTTCCTCTCGGCCTTCTCTTGAACTCCCTCCAACAACACCTTCACCAAAGCAAAATCGGCCATTGCCGATTGGTTTTTCACCAGAAGCGCTGTCTCCCTCCGAATCTAATCCTTCTCCGAACCAGATTCAACCGCGATCCCTCCAAAGTGCCGTCTCGGACCCTGGCTTGATGTTAAATGGAGCTACGATTGTAAACACGCCATCGAGCAGCAGCAGCATCGATAAAACACCCAATGGTAGCAGCAGTACATCGGATTCCCCCAAGAGCGAGGTCGGGAATCCCGGTCTTTCTGGACTCGGATTTCTTACCAGAACGAGGAGCGCGATGAGTGCAGTGTTCCGGCAGGCTCGCCCGAGTATTCAATCC SGIVGSVLAKEGRLPYVSDFVSGAFKIALKRMSRDDSSTSKSKPRNESLMAQVKSLQQELQMLASNRSMTIVTNGGTGGRKYGIVILVVVVGYGVVWIKGWKLPDMMFATKRSLSDACSSVARQLESVYSSISATKRNLSSKMDHVDKSLDESLDLTAETQEKAQLRGKSDTFGRDIKSVHHAVQNLENKLWSFEEKQDLTNEGVRRLCNYAWNMENRRTTERAIPSSSSRPSLELPPTTPSPKQNRPLPIGFSPEALSPSESNPSPNQIQPRSLQSAVSDPGLMLNGATIVNTPSSSSSIDKTPNGSSSTSDSPKSEVGNPGLSGLGFLTRTRSAMSAVFRQARPSIQS Homology
BLAST of MS002968 vs. NCBI nr
Match: XP_022155430.1 (uncharacterized protein LOC111022578 [Momordica charantia]) HSP 1 Score: 634.0 bits (1634), Expect = 7.5e-178 Identity = 347/365 (95.07%), Postives = 350/365 (95.89%), Query Frame = 0
BLAST of MS002968 vs. NCBI nr
Match: XP_022960503.1 (uncharacterized protein LOC111461218 isoform X1 [Cucurbita moschata]) HSP 1 Score: 526.6 bits (1355), Expect = 1.7e-145 Identity = 293/360 (81.39%), Postives = 318/360 (88.33%), Query Frame = 0
BLAST of MS002968 vs. NCBI nr
Match: KAG6592957.1 (hypothetical protein SDJN03_12433, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 526.6 bits (1355), Expect = 1.7e-145 Identity = 293/358 (81.84%), Postives = 317/358 (88.55%), Query Frame = 0
BLAST of MS002968 vs. NCBI nr
Match: XP_023004218.1 (uncharacterized protein LOC111497617 isoform X1 [Cucurbita maxima]) HSP 1 Score: 525.4 bits (1352), Expect = 3.8e-145 Identity = 293/360 (81.39%), Postives = 317/360 (88.06%), Query Frame = 0
BLAST of MS002968 vs. NCBI nr
Match: XP_038875527.1 (uncharacterized protein LOC120067951 isoform X1 [Benincasa hispida]) HSP 1 Score: 515.0 bits (1325), Expect = 5.1e-142 Identity = 288/360 (80.00%), Postives = 317/360 (88.06%), Query Frame = 0
BLAST of MS002968 vs. ExPASy TrEMBL
Match: A0A6J1DMF4 (uncharacterized protein LOC111022578 OS=Momordica charantia OX=3673 GN=LOC111022578 PE=4 SV=1) HSP 1 Score: 634.0 bits (1634), Expect = 3.6e-178 Identity = 347/365 (95.07%), Postives = 350/365 (95.89%), Query Frame = 0
BLAST of MS002968 vs. ExPASy TrEMBL
Match: A0A6J1H958 (uncharacterized protein LOC111461218 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461218 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 8.2e-146 Identity = 293/360 (81.39%), Postives = 318/360 (88.33%), Query Frame = 0
BLAST of MS002968 vs. ExPASy TrEMBL
Match: A0A6J1KYT8 (uncharacterized protein LOC111497617 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497617 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.8e-145 Identity = 293/360 (81.39%), Postives = 317/360 (88.06%), Query Frame = 0
BLAST of MS002968 vs. ExPASy TrEMBL
Match: A0A6J1GS76 (uncharacterized protein LOC111456627 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456627 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 3.6e-141 Identity = 284/356 (79.78%), Postives = 315/356 (88.48%), Query Frame = 0
BLAST of MS002968 vs. ExPASy TrEMBL
Match: A0A6J1GQW5 (uncharacterized protein LOC111456627 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456627 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 1.1e-139 Identity = 284/358 (79.33%), Postives = 315/358 (87.99%), Query Frame = 0
BLAST of MS002968 vs. TAIR 10
Match: AT1G24267.1 (Protein of unknown function (DUF1664) ) HSP 1 Score: 227.3 bits (578), Expect = 2.0e-59 Identity = 145/343 (42.27%), Postives = 216/343 (62.97%), Query Frame = 0
BLAST of MS002968 vs. TAIR 10
Match: AT1G24267.2 (Protein of unknown function (DUF1664) ) HSP 1 Score: 223.0 bits (567), Expect = 3.7e-58 Identity = 146/344 (42.44%), Postives = 215/344 (62.50%), Query Frame = 0
BLAST of MS002968 vs. TAIR 10
Match: AT1G24265.1 (Protein of unknown function (DUF1664) ) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-55 Identity = 146/343 (42.57%), Postives = 211/343 (61.52%), Query Frame = 0
BLAST of MS002968 vs. TAIR 10
Match: AT1G24265.2 (Protein of unknown function (DUF1664) ) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-55 Identity = 146/343 (42.57%), Postives = 211/343 (61.52%), Query Frame = 0
BLAST of MS002968 vs. TAIR 10
Match: AT1G24265.3 (Protein of unknown function (DUF1664) ) HSP 1 Score: 211.8 bits (538), Expect = 8.6e-55 Identity = 145/343 (42.27%), Postives = 210/343 (61.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|