MS002965 (gene) Bitter gourd (TR) v1

Overview


Name	MS002965
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Squamosa promoter-binding-like protein 16
Location	scaffold595_1: 536334 .. 537999 (-)
RNA-Seq Expression	MS002965
Synteny	MS002965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTGAGACTCGGGGGGATTTGCAATATGGGTGAAGGATCTATGGATGACATAAAAGGAACTAGAGTTACTTTGATCGAGTCGTCGTCTTCGAGATTAATGAAGCGGTCGCGTGCTCCCGGGGGTGGAGCCCAAGTCCCTTTGTGTTTGGTTGATGGATGCAGTTCAGACCTTAGCAAATGCAGGGACTACCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAAGAACAACGGTTCTGCCAACAGTGTAGCAGGTGGGATTAGAAAGTTTAAAACATAAATATGTTGCAATTGGCTTCATAATTCTGCCTTTCTGTAAATTTTTAATGGTTTTCTGATCATTAGAATTTAAGTTATGCTGATGGGATATACTCTCTAGTTTGTTGTTTTTTCATCCTGTACTTTATAAAGCTTTTATCTATGCCAACTTTCTCCATATATTTCATTTTTAAAGCATTTCTTGAATTTTATATAGAACTTTTTTGACTTTTGGTTATGCCTTATGTTATCAGCCAAGAGTGCTATCGAGCTTCTGTATATAATTAGTATACTCGATTTGGCCAACCTGAGCGGATCGAGAAACAAGGGGTGATTCCCACAAATCATGATTGTTTATTTAACATAGCAAGCAAAGACATTTTCCCAAATTGTTACCACACATTTGTTATTTTCACCTCAAAATTTCCTTCAAATTCTCTCATGTAAAGTCTTTGTGAGATTTACATTTTATTTGTTCCTAATACTGATTATTGGCATTCATTTCAATCCCATTAACATATTCTTGTAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTCGATGGACACAACCGACGTCGAAGAAAGCCTCAACCAGCTTCTATGGCACTAAATGCAGGAAGATTTCTCTATGGTAACCAAGGTTCGTATGACTAATTTAGGCATGTTTTCTACTTTGGTCATGTTCTACTGATTCCACCATGCTTCCGTGAGTTTCATAATACTATAACGACTGCTCCCATCGTTTTTGTTACCACAGTCGAATGATAAATCGTCAACTTCTTTGTGCAGGTCCAAGATTCTTGCCATTTGGTAATCAACTACTCCCTGCCAGTGATAATGTCAGCTCTTCTTGGATTGGAGCAATCAAACCCGAGAACAACGCCCCTCTTTGCGGCAGCAATACGCAGTTCGGCTTTGCTGATAGAAGAAAAGATATGTTGCCTGGCTCTCTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTATATCCCTATAGGACTGCTTCCCAAATCATCCAATATCCAGCCATTTCTCGATGTTGGATCGAGCAATGGCGGGAATGTTCAGAAAGTGCTCGGAAACGGATCGAATCGATTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGGTCCAACCCAACCTCATCCCCCCAGCCCATTTCATCCACAGCGACAGTCTCGGCTTGGAGAGTGACCCCGGGAATTCTGGTTTGGTTTCGGACGGTAGCAGCGATGCAAACATCCGGTGCTACTCGACGTTCCAGATCGGACCTGATGGATCTTCAGTAGATTTATTCAGGTTT

mRNA sequence

ATGTATTTGAGACTCGGGGGGATTTGCAATATGGGTGAAGGATCTATGGATGACATAAAAGGAACTAGAGTTACTTTGATCGAGTCGTCGTCTTCGAGATTAATGAAGCGGTCGCGTGCTCCCGGGGGTGGAGCCCAAGTCCCTTTGTGTTTGGTTGATGGATGCAGTTCAGACCTTAGCAAATGCAGGGACTACCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAAGAACAACGGTTCTGCCAACAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTCGATGGACACAACCGACGTCGAAGAAAGCCTCAACCAGCTTCTATGGCACTAAATGCAGGAAGATTTCTCTATGGTAACCAAGGTCCAAGATTCTTGCCATTTGGTAATCAACTACTCCCTGCCAGTGATAATGTCAGCTCTTCTTGGATTGGAGCAATCAAACCCGAGAACAACGCCCCTCTTTGCGGCAGCAATACGCAGTTCGGCTTTGCTGATAGAAGAAAAGATATGTTGCCTGGCTCTCTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTATATCCCTATAGGACTGCTTCCCAAATCATCCAATATCCAGCCATTTCTCGATGTTGGATCGAGCAATGGCGGGAATGTTCAGAAAGTGCTCGGAAACGGATCGAATCGATTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGGTCCAACCCAACCTCATCCCCCCAGCCCATTTCATCCACAGCGACAGTCTCGGCTTGGAGAGTGACCCCGGGAATTCTGGTTTGGTTTCGGACGGTAGCAGCGATGCAAACATCCGGTGCTACTCGACGTTCCAGATCGGACCTGATGGATCTTCAGTAGATTTATTCAGGTTT

Coding sequence (CDS)

ATGTATTTGAGACTCGGGGGGATTTGCAATATGGGTGAAGGATCTATGGATGACATAAAAGGAACTAGAGTTACTTTGATCGAGTCGTCGTCTTCGAGATTAATGAAGCGGTCGCGTGCTCCCGGGGGTGGAGCCCAAGTCCCTTTGTGTTTGGTTGATGGATGCAGTTCAGACCTTAGCAAATGCAGGGACTACCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAAGAACAACGGTTCTGCCAACAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTCGATGGACACAACCGACGTCGAAGAAAGCCTCAACCAGCTTCTATGGCACTAAATGCAGGAAGATTTCTCTATGGTAACCAAGGTCCAAGATTCTTGCCATTTGGTAATCAACTACTCCCTGCCAGTGATAATGTCAGCTCTTCTTGGATTGGAGCAATCAAACCCGAGAACAACGCCCCTCTTTGCGGCAGCAATACGCAGTTCGGCTTTGCTGATAGAAGAAAAGATATGTTGCCTGGCTCTCTGGCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTATATCCCTATAGGACTGCTTCCCAAATCATCCAATATCCAGCCATTTCTCGATGTTGGATCGAGCAATGGCGGGAATGTTCAGAAAGTGCTCGGAAACGGATCGAATCGATTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGGTCCAACCCAACCTCATCCCCCCAGCCCATTTCATCCACAGCGACAGTCTCGGCTTGGAGAGTGACCCCGGGAATTCTGGTTTGGTTTCGGACGGTAGCAGCGATGCAAACATCCGGTGCTACTCGACGTTCCAGATCGGACCTGATGGATCTTCAGTAGATTTATTCAGGTTT

Protein sequence

MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVSDGSSDANIRCYSTFQIGPDGSSVDLFRF

Homology

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BLAST of MS002965 vs. NCBI nr
Match: XP_022155412.1 (teosinte glume architecture 1-like [Momordica charantia])

HSP 1 Score: 669.8 bits (1727), Expect = 1.2e-188
Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS
Sbjct: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT
Sbjct: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNG NVQKVLG
Sbjct: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGENVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQIGPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 328

[Close]

BLAST of MS002965 vs. NCBI nr
Match: XP_004140535.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucumis sativus] >KGN46458.1 hypothetical protein Csa_005603 [Cucumis sativus])

HSP 1 Score: 596.3 bits (1536), Expect = 1.6e-166
Identity = 293/328 (89.33%), Postives = 302/328 (92.07%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY  L GI NM E SMDD+KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS +VSSSWIG IKPENN PLCG N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIPPAHFIHSD LGLE DP +SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQ GPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of MS002965 vs. NCBI nr
Match: KAA0039816.1 (squamosa promoter-binding-like protein 16 [Cucumis melo var. makuwa] >TYK24681.1 squamosa promoter-binding-like protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 595.1 bits (1533), Expect = 3.6e-166
Identity = 293/328 (89.33%), Postives = 302/328 (92.07%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY  L GI NM E SMDD+KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS +VSSSWIG IKPENNAPLCG N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIPPAHFIHSD LGLE DP +SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQ GPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of MS002965 vs. NCBI nr
Match: XP_008459851.1 (PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis melo])

HSP 1 Score: 593.6 bits (1529), Expect = 1.1e-165
Identity = 292/328 (89.02%), Postives = 301/328 (91.77%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY  L GI NM E SMDD+KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSL EFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLAEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS +VSSSWIG IKPENNAPLCG N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIPPAHFIHSD LGLE DP +SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQ GPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of MS002965 vs. NCBI nr
Match: XP_038876153.1 (squamosa promoter-binding-like protein 16 [Benincasa hispida] >XP_038876155.1 squamosa promoter-binding-like protein 16 [Benincasa hispida] >XP_038876156.1 squamosa promoter-binding-like protein 16 [Benincasa hispida])

HSP 1 Score: 587.4 bits (1513), Expect = 7.5e-164
Identity = 290/328 (88.41%), Postives = 303/328 (92.38%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY +L GI NMGE SMD++KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWKLRGIGNMGERSMDNMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTI GQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTISGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQ L AS++VSSSWIG IKPENNAPL G ++
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQFLSASNDVSSSWIGMIKPENNAPLSGGDS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIP AHFIHSD LGLESDP NSGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPSAHFIHSDGLGLESDPINSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANI+CYSTFQ GPDGSSVDLFRF
Sbjct: 301 DGSSDANIQCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of MS002965 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46
Identity = 122/311 (39.23%), Postives = 146/311 (46.95%), Query Frame = 0


Query: 3   LRLGGICNMGEGSM--------DDIKG-------TRVTLIESSSSRLMKRSRAPGGGAQV 62
           L+LGG+   G G          +  KG       T      SS+     R  A  G  Q 
Sbjct: 56  LKLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQC 115

Query: 63  PLCLVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRK 122
           P C VDGC  DLSKCRDYHRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD+ K
Sbjct: 116 PSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAK 175

Query: 123 RSCRKRLDGHNRRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAI 182
           RSCRKRLDGHNRRRRKPQP  M  N+  +L   QG RF PF      A+    +SW G I
Sbjct: 176 RSCRKRLDGHNRRRRKPQPDPM--NSASYLASQQGARFSPF------ATPRPEASWTGMI 235

Query: 183 KPENNAPLCGSNTQFGFADRRKDMLPGSLASDYKEKQLAISYIPIG-------------- 242
           K E +          G + R++  +  +     +   L    I  G              
Sbjct: 236 KTEESPYYTHHQIPLGISSRQQHFVGSTSDGGRRFPFLQEGEISFGTGAGAGGVPMDQAA 295

Query: 243 LLPKSSNIQPFLDV--------GSSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEI 274
               +S  QP L          G    G  +     G  +  DSDCALSLLS P     I
Sbjct: 296 AAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPANSTAI 355

[Close]

BLAST of MS002965 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46
Identity = 122/294 (41.50%), Postives = 152/294 (51.70%), Query Frame = 0


Query: 3   LRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGA----QVPLCLVDGCSSD 62
           L+LGG   MGE      +  R      +++   KR R  G G     Q P C VDGC +D
Sbjct: 61  LKLGG---MGECEPGAARRER-----EAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRAD 120

Query: 63  LSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 122
           L KCRDYHRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHN
Sbjct: 121 LGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHN 180

Query: 123 RRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSW-IGAIKPENNAPLCG 182
           RRRRKPQP +MA  +  F+   QG RF PF +  L A      SW  G +K E +     
Sbjct: 181 RRRRKPQPDTMA--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHIT 240

Query: 183 SNTQFGFADRRKD---MLPGSLASDYKEKQLAISYIPIGLLPKSSNI-----------QP 242
                G +   +    +  G+    Y ++     ++  G +  ++ +           QP
Sbjct: 241 HQIPLGSSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQP 300

Query: 243 FLDVG----SSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMVQP 274
            L  G    SS  G  +     G  R  DSDCALSLLS P     I++S MV+P
Sbjct: 301 LLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGIDVSRMVRP 338

[Close]

BLAST of MS002965 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.9e-46
Identity = 122/295 (41.36%), Postives = 152/295 (51.53%), Query Frame = 0


Query: 3   LRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGA-----QVPLCLVDGCSS 62
           L+LGG   MGE      +  R      +++   KR R  G G      Q P C VDGC +
Sbjct: 61  LKLGG---MGECEPGAARRER-----EAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRA 120

Query: 63  DLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 122
           DL KCRDYHRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGH
Sbjct: 121 DLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGH 180

Query: 123 NRRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSW-IGAIKPENNAPLC 182
           NRRRRKPQP +MA  +  F+   QG RF PF +  L A      SW  G +K E +    
Sbjct: 181 NRRRRKPQPDTMA--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHI 240

Query: 183 GSNTQFGFADRRKD---MLPGSLASDYKEKQLAISYIPIGLLPKSSNI-----------Q 242
                 G +   +    +  G+    Y ++     ++  G +  ++ +           Q
Sbjct: 241 THQIPLGSSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQ 300

Query: 243 PFLDVG----SSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMVQP 274
           P L  G    SS  G  +     G  R  DSDCALSLLS P     I++S MV+P
Sbjct: 301 PLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGIDVSRMVRP 339

[Close]

BLAST of MS002965 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 118/301 (39.20%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 15  SMDDIKGTRVTLIESSSSRLMKRSRAPGGGA-QVPLCLVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +   E S S   KR+R  G G  Q+P+CLVDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDM 194
             F  G QG + L F  G+ + P +  ++ SW  ++    +  +  + + +G   + +  
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLV---SVAVAANGSSYG---QSQSY 244

Query: 195 LPGSLASDYKEKQLAISYIPIGLLPKS--SNIQPFLDVGSSNGGNVQKVLGNGSNRFFDS 254
           + GS        +  I + PI   P S  S  + F  +          +    ++   DS
Sbjct: 245 VVGS-----SPAKTGIMF-PISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDS 304

Query: 255 DCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSL-------GLESDPGNSGLVSDG 304
           DCALSLLS+         SS   P+L+ P   +  +++       GL     N+  VSDG
Sbjct: 305 DCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVSDG 340

[Close]

BLAST of MS002965 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 118/301 (39.20%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 15  SMDDIKGTRVTLIESSSSRLMKRSRAPGGGA-QVPLCLVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +   E S S   KR+R  G G  Q+P+CLVDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDM 194
             F  G QG + L F  G+ + P +  ++ SW  ++    +  +  + + +G   + +  
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLV---SVAVAANGSSYG---QSQSY 244

Query: 195 LPGSLASDYKEKQLAISYIPIGLLPKS--SNIQPFLDVGSSNGGNVQKVLGNGSNRFFDS 254
           + GS        +  I + PI   P S  S  + F  +          +    ++   DS
Sbjct: 245 VVGS-----SPAKTGIMF-PISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDS 304

Query: 255 DCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSL-------GLESDPGNSGLVSDG 304
           DCALSLLS+         SS   P+L+ P   +  +++       GL     N+  VSDG
Sbjct: 305 DCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVSDG 340

[Close]

BLAST of MS002965 vs. ExPASy TrEMBL
Match: A0A6J1DP98 (teosinte glume architecture 1-like OS=Momordica charantia OX=3673 GN=LOC111022560 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 5.6e-189
Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS
Sbjct: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT
Sbjct: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNG NVQKVLG
Sbjct: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGENVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQIGPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 328

[Close]

BLAST of MS002965 vs. ExPASy TrEMBL
Match: A0A0A0KAG4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 7.9e-167
Identity = 293/328 (89.33%), Postives = 302/328 (92.07%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY  L GI NM E SMDD+KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS +VSSSWIG IKPENN PLCG N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIPPAHFIHSD LGLE DP +SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQ GPDGSSVDLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of MS002965 vs. ExPASy TrEMBL
Match: A0A5D3DM54 (Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002310 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.8e-166
Identity = 293/328 (89.33%), Postives = 302/328 (92.07%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY  L GI NM E SMDD+KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS +VSSSWIG IKPENNAPLCG N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIPPAHFIHSD LGLE DP +SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQ GPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of MS002965 vs. ExPASy TrEMBL
Match: A0A1S3CB53 (squamosa promoter-binding-like protein 16 OS=Cucumis melo OX=3656 GN=LOC103498851 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 5.1e-166
Identity = 292/328 (89.02%), Postives = 301/328 (91.77%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MY  L GI NM E SMDD+KGTRV LIESSSSRLMKRSRAPG GAQVP C+VDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSL EFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLAEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS +VSSSWIG IKPENNAPLCG N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSL+SDYKEKQLAIS IPIGLLPKSS+ QPFL+VGSSNGGNVQKVLG
Sbjct: 181 QFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGSNRFFDSDCALSLLSTPVEPGEINLSSM Q NLIPPAHFIHSD LGLE DP +SGLVS
Sbjct: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSSDANIRCYSTFQ GPDGSS DLFRF
Sbjct: 301 DGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of MS002965 vs. ExPASy TrEMBL
Match: A0A6J1GQX7 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456630 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.4e-161
Identity = 284/328 (86.59%), Postives = 300/328 (91.46%), Query Frame = 0


Query: 1   MYLRLGGICNMGEGSMDDIKGTRVTLIESSSSRLMKRSRAPGGGAQVPLCLVDGCSSDLS 60
           MYLRL GI NMG+GSMDD+KGTRV+LIESS+SRLMKRSRAPG G QVP C+VDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPASDNVSSSWIGAIKPENNAPLCGSNT 180
           RRKPQPA+M LNAGRFLYGNQGPRFLPFGNQLL AS++VSSSWIG IKPE+NAPLC  N+
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180

Query: 181 QFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLLPKSSNIQPFLDVGSSNGGNVQKVLG 240
           QF F DRRK MLPGSLA DYKEKQLAIS IPIGLLPKSS+ +PFLDV SSNG NVQKVLG
Sbjct: 181 QFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLG 240

Query: 241 NGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSLGLESDPGNSGLVS 300
           NGS++FF+SDCALSLLSTPVEPGEINLSSM Q NLI PAHFIHSD LGLESDP NSGLVS
Sbjct: 241 NGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVS 300

Query: 301 DGSSDANIRCYSTFQIGPDGSSVDLFRF 329
           DGSS ANIRCY TFQ G  GSSVDLFR+
Sbjct: 301 DGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of MS002965 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 175.3 bits (443), Expect = 8.3e-44
Identity = 118/301 (39.20%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 15  SMDDIKGTRVTLIESSSSRLMKRSRAPGGGA-QVPLCLVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +   E S S   KR+R  G G  Q+P+CLVDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDM 194
             F  G QG + L F  G+ + P +  ++ SW  ++    +  +  + + +G   + +  
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLV---SVAVAANGSSYG---QSQSY 244

Query: 195 LPGSLASDYKEKQLAISYIPIGLLPKS--SNIQPFLDVGSSNGGNVQKVLGNGSNRFFDS 254
           + GS        +  I + PI   P S  S  + F  +          +    ++   DS
Sbjct: 245 VVGS-----SPAKTGIMF-PISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDS 304

Query: 255 DCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSL-------GLESDPGNSGLVSDG 304
           DCALSLLS+         SS   P+L+ P   +  +++       GL     N+  VSDG
Sbjct: 305 DCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVSDG 340

[Close]

BLAST of MS002965 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 175.3 bits (443), Expect = 8.3e-44
Identity = 118/301 (39.20%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 15  SMDDIKGTRVTLIESSSSRLMKRSRAPGGGA-QVPLCLVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +   E S S   KR+R  G G  Q+P+CLVDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDM 194
             F  G QG + L F  G+ + P +  ++ SW  ++    +  +  + + +G   + +  
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLV---SVAVAANGSSYG---QSQSY 244

Query: 195 LPGSLASDYKEKQLAISYIPIGLLPKS--SNIQPFLDVGSSNGGNVQKVLGNGSNRFFDS 254
           + GS        +  I + PI   P S  S  + F  +          +    ++   DS
Sbjct: 245 VVGS-----SPAKTGIMF-PISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDS 304

Query: 255 DCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSL-------GLESDPGNSGLVSDG 304
           DCALSLLS+         SS   P+L+ P   +  +++       GL     N+  VSDG
Sbjct: 305 DCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVSDG 340

[Close]

BLAST of MS002965 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 175.3 bits (443), Expect = 8.3e-44
Identity = 118/301 (39.20%), Postives = 163/301 (54.15%), Query Frame = 0


Query: 15  SMDDIKGTRVTLIESSSSRLMKRSRAPGGGA-QVPLCLVDGCSSDLSKCRDYHRRHKVCE 74
           S+   K + +   E S S   KR+R  G G  Q+P+CLVDGC SD S CR+YH+RHKVC+
Sbjct: 65  SLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCD 124

Query: 75  LHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNA 134
           +HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  +   A
Sbjct: 125 VHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA 184

Query: 135 GRFLYGNQGPRFLPF--GNQLLPASDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDM 194
             F  G QG + L F  G+ + P +  ++ SW  ++    +  +  + + +G   + +  
Sbjct: 185 -NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSLV---SVAVAANGSSYG---QSQSY 244

Query: 195 LPGSLASDYKEKQLAISYIPIGLLPKS--SNIQPFLDVGSSNGGNVQKVLGNGSNRFFDS 254
           + GS        +  I + PI   P S  S  + F  +          +    ++   DS
Sbjct: 245 VVGS-----SPAKTGIMF-PISSSPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDS 304

Query: 255 DCALSLLSTPVEPGEINLSSMVQPNLIPPAHFIHSDSL-------GLESDPGNSGLVSDG 304
           DCALSLLS+         SS   P+L+ P   +  +++       GL     N+  VSDG
Sbjct: 305 DCALSLLSS---------SSSSVPHLLQPPLSLSQEAVETVFYGSGLFE---NASAVSDG 340

[Close]

BLAST of MS002965 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-33
Identity = 97/251 (38.65%), Postives = 129/251 (51.39%), Query Frame = 0


Query: 36  KRSRAPGGGAQVPLCLVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCS 95
           K++++ G   QVP C +DGC  DLS  +DYHR+H+VCE HSK PKV + G E+RFCQQCS
Sbjct: 162 KKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCS 221

Query: 96  RFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPA 155
           RFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R     Q    L  G  L   
Sbjct: 222 RFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQHTSMLWNGLSLNTR 281

Query: 156 SDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLL 215
           S+    +W    + +      G    F   +  +D L       +   Q +      G  
Sbjct: 282 SEE-KYTWGTTYETKPTQMESGFTLSFQRGNGSEDQLFTGSTLSFSAFQTS-----GGFS 341

Query: 216 PKSSNIQ-PFLDVGSSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPN 275
              SNIQ P   VG  +GG       + S+ F+    ALSLLST  +   I  + + +P 
Sbjct: 342 AGKSNIQLPDKGVGECSGGL------HESHDFYS---ALSLLSTTSDSQGIKHTPVAEPP 396

Query: 276 LI---PPAHFI 283
            I    P+HFI
Sbjct: 402 PIFGTFPSHFI 396

[Close]

BLAST of MS002965 vs. TAIR 10
Match: AT1G27370.2 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-33
Identity = 97/251 (38.65%), Postives = 129/251 (51.39%), Query Frame = 0


Query: 36  KRSRAPGGGAQVPLCLVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCS 95
           K++++ G   QVP C +DGC  DLS  +DYHR+H+VCE HSK PKV + G E+RFCQQCS
Sbjct: 162 KKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCS 221

Query: 96  RFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPASMALNAGRFLYGNQGPRFLPFGNQLLPA 155
           RFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R     Q    L  G  L   
Sbjct: 222 RFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQHTSMLWNGLSLNTR 281

Query: 156 SDNVSSSWIGAIKPENNAPLCGSNTQFGFADRRKDMLPGSLASDYKEKQLAISYIPIGLL 215
           S+    +W    + +      G    F   +  +D L       +   Q +      G  
Sbjct: 282 SEE-KYTWGTTYETKPTQMESGFTLSFQRGNGSEDQLFTGSTLSFSAFQTS-----GGFS 341

Query: 216 PKSSNIQ-PFLDVGSSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMVQPN 275
              SNIQ P   VG  +GG       + S+ F+    ALSLLST  +   I  + + +P 
Sbjct: 342 AGKSNIQLPDKGVGECSGGL------HESHDFYS---ALSLLSTTSDSQGIKHTPVAEPP 396

Query: 276 LI---PPAHFI 283
            I    P+HFI
Sbjct: 402 PIFGTFPSHFI 396

The following BLAST results are available for this feature:

BLAST of MS002965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155412.1	1.2e-188	99.70	teosinte glume architecture 1-like [Momordica charantia]	[more]
XP_004140535.1	1.6e-166	89.33	squamosa promoter-binding-like protein 16 isoform X1 [Cucumis sativus] >KGN46458...	[more]
KAA0039816.1	3.6e-166	89.33	squamosa promoter-binding-like protein 16 [Cucumis melo var. makuwa] >TYK24681.1...	[more]
XP_008459851.1	1.1e-165	89.02	PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis melo]	[more]
XP_038876153.1	7.5e-164	88.41	squamosa promoter-binding-like protein 16 [Benincasa hispida] >XP_038876155.1 sq...	[more]

BLAST of MS002965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YZE8	3.0e-46	39.23	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	3.0e-46	41.50	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	3.9e-46	41.36	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
B9DI20	1.2e-42	39.20	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	1.2e-42	39.20	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of MS002965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DP98	5.6e-189	99.70	teosinte glume architecture 1-like OS=Momordica charantia OX=3673 GN=LOC11102256...	[more]
A0A0A0KAG4	7.9e-167	89.33	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE...	[more]
A0A5D3DM54	1.8e-166	89.33	Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CB53	5.1e-166	89.02	squamosa promoter-binding-like protein 16 OS=Cucumis melo OX=3656 GN=LOC10349885...	[more]
A0A6J1GQX7	8.4e-161	86.59	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=36...	[more]

BLAST of MS002965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	8.3e-44	39.20	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	8.3e-44	39.20	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	8.3e-44	39.20	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G27370.1	5.1e-33	38.65	squamosa promoter binding protein-like 10	[more]
AT1G27370.2	5.1e-33	38.65	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 50..123 e-value: 7.2E-29 score: 99.9
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 47..124 score: 31.572969
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 41..111 e-value: 4.1E-33 score: 115.3
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 48..129
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 40..123 e-value: 7.4E-37 score: 123.5
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 3..322
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 3..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002965.1	MS002965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding