MS002964 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAAAATCAGAAGCGGAGAGGCTTCATGAAGCGCCTGTTTCGAGCCGCGAGATCCCGCGTCAAAGCCAATGAGAAGCAAACCAACTCGCCGGCGCCGTCTACATCGTTAACCGGCGGCGGCGGCGGATCGTTTGCGGTGTCTAGCGAGATGAGATCTGCAAGTTATCCGAACAGGCAGGCGCCGGCGATGGCGGTGCAGGGCGGACTCCGCGACGGAAACGGTGGAGTGCGGGGAGGTTACGGCGGCGGCGATGAGAACGTGGACGTGAAGGCGGCGACTTACATTTTGTACGTTAGAGAGCGTTTGAAGATCGAGAGATCAGTGGATTGGGATCAAAAGGTCTTC ATGGAGAAAAATCAGAAGCGGAGAGGCTTCATGAAGCGCCTGTTTCGAGCCGCGAGATCCCGCGTCAAAGCCAATGAGAAGCAAACCAACTCGCCGGCGCCGTCTACATCGTTAACCGGCGGCGGCGGCGGATCGTTTGCGGTGTCTAGCGAGATGAGATCTGCAAGTTATCCGAACAGGCAGGCGCCGGCGATGGCGGTGCAGGGCGGACTCCGCGACGGAAACGGTGGAGTGCGGGGAGGTTACGGCGGCGGCGATGAGAACGTGGACGTGAAGGCGGCGACTTACATTTTGTACGTTAGAGAGCGTTTGAAGATCGAGAGATCAGTGGATTGGGATCAAAAGGTCTTC ATGGAGAAAAATCAGAAGCGGAGAGGCTTCATGAAGCGCCTGTTTCGAGCCGCGAGATCCCGCGTCAAAGCCAATGAGAAGCAAACCAACTCGCCGGCGCCGTCTACATCGTTAACCGGCGGCGGCGGCGGATCGTTTGCGGTGTCTAGCGAGATGAGATCTGCAAGTTATCCGAACAGGCAGGCGCCGGCGATGGCGGTGCAGGGCGGACTCCGCGACGGAAACGGTGGAGTGCGGGGAGGTTACGGCGGCGGCGATGAGAACGTGGACGTGAAGGCGGCGACTTACATTTTGTACGTTAGAGAGCGTTTGAAGATCGAGAGATCAGTGGATTGGGATCAAAAGGTCTTC MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILYVRERLKIERSVDWDQKVF Homology
BLAST of MS002964 vs. NCBI nr
Match: KAA0039815.1 (hypothetical protein E6C27_scaffold122G00900 [Cucumis melo var. makuwa] >TYK24682.1 hypothetical protein E5676_scaffold266G002320 [Cucumis melo var. makuwa]) HSP 1 Score: 120.9 bits (302), Expect = 7.1e-24 Identity = 73/112 (65.18%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of MS002964 vs. NCBI nr
Match: KGN46459.1 (hypothetical protein Csa_005040 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22 Identity = 69/112 (61.61%), Postives = 79/112 (70.54%), Query Frame = 0
BLAST of MS002964 vs. NCBI nr
Match: KAG6592959.1 (hypothetical protein SDJN03_12435, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.0 bits (245), Expect = 2.9e-17 Identity = 66/116 (56.90%), Postives = 77/116 (66.38%), Query Frame = 0
BLAST of MS002964 vs. NCBI nr
Match: KAF3944789.1 (hypothetical protein CMV_028773 [Castanea mollissima]) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04 Identity = 48/119 (40.34%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of MS002964 vs. NCBI nr
Match: PON54965.1 (hypothetical protein TorRG33x02_300840 [Trema orientale]) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04 Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of MS002964 vs. ExPASy TrEMBL
Match: A0A5A7TED2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002320 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.5e-24 Identity = 73/112 (65.18%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of MS002964 vs. ExPASy TrEMBL
Match: A0A0A0KCA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094770 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 8.5e-23 Identity = 69/112 (61.61%), Postives = 79/112 (70.54%), Query Frame = 0
BLAST of MS002964 vs. ExPASy TrEMBL
Match: A0A2N9HFE1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38273 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.7e-05 Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of MS002964 vs. ExPASy TrEMBL
Match: A0A2P5C1U5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_300840 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.3e-04 Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of MS002964 vs. ExPASy TrEMBL
Match: A0A7N2L8U0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.9e-04 Identity = 45/112 (40.18%), Postives = 58/112 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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