Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCACTCATCTTCAATACGCCGATGATACTTTGATTTTTTGCCAAGACGAGGAAAACTTGGAAACATGGTGGGCTTTCCTTAACATCTTTTTGAAGGTTGCATGCCTGTTCTCAAATCTTGAAAAGACTTCACTGATTGGTATCAAAATAAAAAAGATAGGCTGCTGTTGTACCAAGTCTTTCACTTTGGTTGTAAGGCTGATGCTCTCCTATCGTTTACTTGGGTGTTCCACTGGGGTAAAACACAAATGTTCTTCTTTTTGGGATCCCACAGTGGATAAGTTTAATACCAAGCTCGAAAATTGGAAGAAATGTTGTCTAAGGGAGGGAGACTAACTCTTGCATCGTCCGTTTTGAATACCATCCCCTATATGATTTCTCTTTCTTCAAAGCCCTTAAAAAGACATGGCAGAAATGGAGAAGATAGTCAGAAATTTATTTTGGAATGGTACCGGTTATCATCCCCAATGTCATTGAGTGAATTGGGACCAAACTTCCCTCCAAAAGATCCATGGAGCCTTGGGATTGGTACTTCCAAACAACAGAATGAGACCTTAATGCATAAATGGTTGTGGAGA
mRNA sequence
ATCACTCATCTTCAATACGCCGATGATACTTTGATTTTTTGCCAAGACGAGGAAAACTTGGAAACATGGTGGGCTTTCCTTAACATCTTTTTGAAGGTTGCATGCCTGTTCTCAAATCTTGAAAAGACTTCACTGATTGGTATCAAAATAAAAAAGATAGGCTGCTGTTGTACCAAGTCTTTCACTTTGGTTGTAAGGCTGATGCTCTCCTATCGTTTACTTGGGTGTTCCACTGGGGTAAAACACAAATGTTCTTCTTTTTGGGATCCCACAGTGGATAAGTTTAATACCAAGCTCGAAAATTGGAAGATGTTGTCTAAGGGAGGGAGACTAACTCTTGCATCGTCCGTTTTGAATACCATCCCCTATATGATTTCTCTTTCTTCAAAGCCCTTAAAAAGACATGGCAGAAATGGAGAAGATAGTCAGAAATTTATTTTGGAATGGTACCGGTTATCATCCCCAATGTCATTGAGTGAATTGGGACCAAACTTCCCTCCAAAAGATCCATGGAGCCTTGGGATTGGTACTTCCAAACAACAGAATGAGACCTTAATGCATAAATGGTTGTGGAGA
Coding sequence (CDS)
ATCACTCATCTTCAATACGCCGATGATACTTTGATTTTTTGCCAAGACGAGGAAAACTTGGAAACATGGTGGGCTTTCCTTAACATCTTTTTGAAGGTTGCATGCCTGTTCTCAAATCTTGAAAAGACTTCACTGATTGGTATCAAAATAAAAAAGATAGGCTGCTGTTGTACCAAGTCTTTCACTTTGGTTGTAAGGCTGATGCTCTCCTATCGTTTACTTGGGTGTTCCACTGGGGTAAAACACAAATGTTCTTCTTTTTGGGATCCCACAGTGGATAAGTTTAATACCAAGCTCGAAAATTGGAAGATGTTGTCTAAGGGAGGGAGACTAACTCTTGCATCGTCCGTTTTGAATACCATCCCCTATATGATTTCTCTTTCTTCAAAGCCCTTAAAAAGACATGGCAGAAATGGAGAAGATAGTCAGAAATTTATTTTGGAATGGTACCGGTTATCATCCCCAATGTCATTGAGTGAATTGGGACCAAACTTCCCTCCAAAAGATCCATGGAGCCTTGGGATTGGTACTTCCAAACAACAGAATGAGACCTTAATGCATAAATGGTTGTGGAGA
Protein sequence
ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWKMLSKGGRLTLASSVLNTIPYMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHKWLWR
Homology
BLAST of MS002958 vs. NCBI nr
Match:
KAG2689901.1 (hypothetical protein I3760_09G162400 [Carya illinoinensis])
HSP 1 Score: 96.7 bits (239), Expect = 2.4e-16
Identity = 68/209 (32.54%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQ-DEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-KIKKIGCCCT 60
++HL +ADDTLIFC D+E + A L F V+ L NL K+ ++ + + +G T
Sbjct: 32 VSHLLFADDTLIFCDPDQEQFRSLRALLLCFEAVSGLKVNLSKSEVVPVGSVNNLGTVAT 91
Query: 61 KSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGGRLTLASS 120
V L + Y LG G HK + W+ ++K KL WK LSKGGR+TL S
Sbjct: 92 IMGCKVSSLPMKY--LGLPLGAPHKSKTVWEGIIEKIEGKLAGWKRIYLSKGGRITLIKS 151
Query: 121 VLNTIP-YMISLSSKP------LKRHGRN------GEDSQKFILEWYRLSSPMSLSELGP 180
L+ +P Y +SL P L+R R+ G+ + +++W ++ +P+S
Sbjct: 152 TLSNLPTYFLSLFPVPAGVANRLERIFRDFLWGGLGDTKKFHLIKWNKVCTPLSCG---- 211
Query: 181 NFPPKDPWSLGIGTSKQQNETLMHKWLWR 193
LGI + + N+ L+ KWLWR
Sbjct: 212 --------GLGIRSLRTFNKALLGKWLWR 226
BLAST of MS002958 vs. NCBI nr
Match:
XP_016200256.1 (uncharacterized protein LOC107641275 [Arachis ipaensis])
HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEEN-LETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK--IGCCC 60
++HLQ+ADDT++FC EE+ + + L +F ++ L N EK+SLI I ++ + C C
Sbjct: 62 LSHLQFADDTILFCPPEEDTIRNYKRLLRVFELMSGLSINFEKSSLIPINCEEQWVDCMC 121
Query: 61 TKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENW--KMLSKGGRLTLAS 120
L + Y LG S G + W P +DK KL W K+L+K G+L L
Sbjct: 122 NLLGCKGDSLPVKY--LGISLGANPRLVKTWKPIIDKVEEKLSLWKAKVLNKAGKLVLIK 181
Query: 121 SVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLG 180
SVLN++P Y +SL P + + F+ + M+L PK LG
Sbjct: 182 SVLNSLPVYYLSLFKMPKAVAEKLISLQRTFLWSSEEGRTGMALVRWEVVQAPKKLGGLG 241
Query: 181 IGTSKQQNETLMHKWLWR 193
+G + +N L+ KW WR
Sbjct: 242 VGDAMVRNTALLFKWWWR 257
BLAST of MS002958 vs. NCBI nr
Match:
XP_018810157.1 (uncharacterized protein LOC108983081 [Juglans regia] >KAF5476686.1 hypothetical protein F2P56_003400 [Juglans regia])
HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQ-DEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-KIKKIGCCCT 60
++HL +ADDTL+FC+ D + L A L F + L N +K+ L+ + + +
Sbjct: 32 LSHLLFADDTLLFCEADRDQLRALKALLLCFEAASDLKVNFDKSELVPVGNVSNTRQIAS 91
Query: 61 KSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGGRLTLASS 120
V L ++Y LG G + SS WDP ++K KLE WK LSKGGRLTL S
Sbjct: 92 ILGCKVASLPMTY--LGLPLGAAVRASSIWDPVIEKIERKLEGWKRLYLSKGGRLTLIKS 151
Query: 121 VLNTIP-YMISLSSKPLKRHGR------------NGEDSQKFILEWYRLSSPMSLSELGP 180
+L+ +P Y +SL P + R G++ + ++ W ++ P+S
Sbjct: 152 ILSNLPTYFLSLFQLPARVAARIEKLYRDFLWSGIGDEFKFHLISWDKVCRPLSSG---- 211
Query: 181 NFPPKDPWSLGIGTSKQQNETLMHKWLWR 193
LGI + N L+ KWLWR
Sbjct: 212 --------GLGIKNLRTFNRALLGKWLWR 226
BLAST of MS002958 vs. NCBI nr
Match:
XP_009335445.1 (PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri])
HSP 1 Score: 93.6 bits (231), Expect = 2.0e-15
Identity = 69/204 (33.82%), Postives = 99/204 (48.53%), Query Frame = 0
Query: 1 ITHLQYADDTLIF-CQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-----KIKKIG 60
I+HLQ+ADDT+ F +DE+ LN+F ++ L N K S+ GI K+K +
Sbjct: 501 ISHLQFADDTIFFLAEDEDVWNNLLEVLNLFCTISGLKINKAKCSMAGINSDCEKLKGMA 560
Query: 61 ---CCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGG 120
C S+ + + LG G + K FWDP V+K +L++WK LSKGG
Sbjct: 561 DSWGCEVGSWPI--------KYLGLPLGGRPKALMFWDPVVEKMEKRLQSWKKAFLSKGG 620
Query: 121 RLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPK 180
RLTL VL ++P Y +SL P GR + + F+ E L + K
Sbjct: 621 RLTLIQFVLGSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVIKSK 680
Query: 181 DPWSLGIGTSKQQNETLMHKWLWR 193
+ L +G + Q E L+ KWLWR
Sbjct: 681 EEGGLCVGNLRNQKEALLAKWLWR 696
BLAST of MS002958 vs. NCBI nr
Match:
XP_020982485.1 (uncharacterized protein LOC110273620 [Arachis duranensis])
HSP 1 Score: 92.8 bits (229), Expect = 3.4e-15
Identity = 67/205 (32.68%), Postives = 100/205 (48.78%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEEN-LETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK------- 60
++HLQ+ADDT++FC EE+ + + L +F ++ L N EK+SLI I ++
Sbjct: 252 LSHLQFADDTILFCPPEEDTIRNYKRLLRVFELMSGLSINFEKSSLIPINCEEQWVDRMC 311
Query: 61 --IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENW--KMLSKG 120
+GC K TL V + LG S G + W P +DK KL W K+L+K
Sbjct: 312 NLLGC---KGDTLPV------KYLGISLGANPRLVKTWKPIIDKVEEKLSLWKAKVLNKA 371
Query: 121 GRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPP 180
G+L L SVLN++P Y +SL P + + F+ + M+L P
Sbjct: 372 GKLVLIKSVLNSLPVYYLSLFKMPKAVAEKLISLQRTFLWSSEEGRTGMALVRWEVVQAP 431
Query: 181 KDPWSLGIGTSKQQNETLMHKWLWR 193
K LG+G + +N L+ KW WR
Sbjct: 432 KKLGGLGVGDAVVRNTALLFKWWWR 447
BLAST of MS002958 vs. ExPASy TrEMBL
Match:
A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 1.8e-17
Identity = 69/204 (33.82%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKI---------K 60
++HLQ+ADDT+ F ++E++L + F ++ L NL K+ L+GI + +
Sbjct: 1382 VSHLQFADDTIFFVENEQSLHKLLRVVEAFCAISGLKINLSKSQLLGICMDEEIVSRLAR 1441
Query: 61 KIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGG 120
+IGC V L Y LG G + SFW+P +DK +L+ WK LSKGG
Sbjct: 1442 RIGC-------EVGSWPLQY--LGMPLGGSPRKWSFWEPVMDKCAKRLDGWKCAFLSKGG 1501
Query: 121 RLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPK 180
RLTL SVL+++P Y +SL P + + F+ E S L P+
Sbjct: 1502 RLTLIQSVLSSLPLYFLSLFKAPRSVTKALEKMMRDFLWEGSESSGGEHLVAWDEVCRPR 1561
Query: 181 DPWSLGIGTSKQQNETLMHKWLWR 193
LGIG + +N++L+ KWLWR
Sbjct: 1562 HEGGLGIGRLELRNKSLLMKWLWR 1576
BLAST of MS002958 vs. ExPASy TrEMBL
Match:
A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 97.1 bits (240), Expect = 8.8e-17
Identity = 68/204 (33.33%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIK--------- 60
++HLQ+ADDTL F +DE +L+ + F ++ L NL K+ L+G+ +
Sbjct: 1604 LSHLQFADDTLFFVKDEASLQKLVKIVEAFCGISGLKVNLNKSQLLGVCMDEDAVAQSAI 1663
Query: 61 KIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGG 120
+IGC V R ++Y LG G + SFW+P +DK T+++ WK LS+GG
Sbjct: 1664 QIGC-------EVGRWPMTY--LGMPLGGSPRKRSFWEPVLDKCATRMDGWKCSFLSRGG 1723
Query: 121 RLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPK 180
RLTL SVL+++P Y +SL P + + F E L+ L P+
Sbjct: 1724 RLTLIQSVLSSLPIYFLSLFKAPKVVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPR 1783
Query: 181 DPWSLGIGTSKQQNETLMHKWLWR 193
L IG + +N+ L+ KWLWR
Sbjct: 1784 AEGGLAIGRLEMRNKGLLMKWLWR 1798
BLAST of MS002958 vs. ExPASy TrEMBL
Match:
A0A803QEA6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 69/204 (33.82%), Postives = 103/204 (50.49%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK-------- 60
++HLQ+ADDTL F +DE +L+ + F ++ L NL K+ L+GI + +
Sbjct: 1031 LSHLQFADDTLFFVKDEVSLQKLVKVVKAFCGISGLKVNLNKSQLLGICMNEEAVAQSAI 1090
Query: 61 -IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGG 120
IGC V R ++Y LG S G + SFW+P +DK +++ WK LS+GG
Sbjct: 1091 LIGC-------EVGRWPMTY--LGMSLGGSPRKRSFWEPVLDKCAKRMDGWKCSFLSRGG 1150
Query: 121 RLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPK 180
RLTL SVL+++P Y +SL P + ++F E L+ L P+
Sbjct: 1151 RLTLIQSVLSSLPIYYLSLFKAPKVVLKELEKMMREFFWEGGDLAGGDHLVAWDEVCKPR 1210
Query: 181 DPWSLGIGTSKQQNETLMHKWLWR 193
L IG +N+ L+ KWLWR
Sbjct: 1211 AEGGLAIGKLDMRNKGLLMKWLWR 1225
BLAST of MS002958 vs. ExPASy TrEMBL
Match:
A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 7.4e-16
Identity = 66/204 (32.35%), Postives = 102/204 (50.00%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK-------- 60
++HLQ+ADDTL F +DE++L+ + F ++ L NL K+ L+GI +
Sbjct: 681 LSHLQFADDTLFFVKDEDSLQKLVKIVEAFCGISGLKVNLNKSQLLGICLSDEAVAQGAN 740
Query: 61 -IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGG 120
IGC V + ++Y LG G + +FW+P +DK +++ WK LS+GG
Sbjct: 741 LIGC-------EVGKWPMTY--LGMPLGGSPRKKTFWEPVLDKCAKRMDGWKCSFLSRGG 800
Query: 121 RLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPK 180
RLTL SVL+++P Y +SL P + + F E L+ L P+
Sbjct: 801 RLTLIQSVLSSLPIYYLSLFKVPKMVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPR 860
Query: 181 DPWSLGIGTSKQQNETLMHKWLWR 193
L IG + +N+ L+ KWLWR
Sbjct: 861 AEGGLAIGRLEMRNKGLLMKWLWR 875
BLAST of MS002958 vs. ExPASy TrEMBL
Match:
A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 1.3e-15
Identity = 67/204 (32.84%), Postives = 100/204 (49.02%), Query Frame = 0
Query: 1 ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK-------- 60
I+HLQ+ADDTL F +DE +L + F ++ L NL K+ L+GI +++
Sbjct: 1580 ISHLQFADDTLFFVKDEASLRKLVEIVEAFCGISGLKVNLNKSQLLGISLEEEVVAQNAE 1639
Query: 61 -IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWK--MLSKGG 120
IGC V ++Y LG G + +FW+P +DK +L+ WK LS+GG
Sbjct: 1640 IIGC-------EVGTWPMTY--LGMPLGGSPRKGTFWEPVLDKCAKRLDGWKCSFLSRGG 1699
Query: 121 RLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPK 180
RL L SVL+++P Y +SL P + + F E L+ L P+
Sbjct: 1700 RLILIQSVLSSLPIYYLSLFKAPKMVLQAIEKMMRDFFWEGGDLAGGDHLVAWDEVCKPR 1759
Query: 181 DPWSLGIGTSKQQNETLMHKWLWR 193
L IG + +N+ L+ KWLWR
Sbjct: 1760 SEGGLAIGRLEMRNKGLLMKWLWR 1774
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG2689901.1 | 2.4e-16 | 32.54 | hypothetical protein I3760_09G162400 [Carya illinoinensis] | [more] |
XP_016200256.1 | 1.2e-15 | 32.83 | uncharacterized protein LOC107641275 [Arachis ipaensis] | [more] |
XP_018810157.1 | 1.2e-15 | 31.58 | uncharacterized protein LOC108983081 [Juglans regia] >KAF5476686.1 hypothetical ... | [more] |
XP_009335445.1 | 2.0e-15 | 33.82 | PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri] | [more] |
XP_020982485.1 | 3.4e-15 | 32.68 | uncharacterized protein LOC110273620 [Arachis duranensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803P465 | 1.8e-17 | 33.82 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QQM3 | 8.8e-17 | 33.33 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QEA6 | 1.5e-16 | 33.82 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803P8A0 | 7.4e-16 | 32.35 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QI00 | 1.3e-15 | 32.84 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |