MS002865 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTAGAGAGATGAAGAAGAAGATGGGAGTTGTTGCCGGCGGGCCGCCGGAGTGGGACCAGCTGAGGAGGGTGCCGTCTGGGCCTGACCCATTGCACCACAACGGTGGAACCCCTAAAAAGCCAAGAACTCCA ATGCTTAGAGAGATGAAGAAGAAGATGGGAGTTGTTGCCGGCGGGCCGCCGGAGTGGGACCAGCTGAGGAGGGTGCCGTCTGGGCCTGACCCATTGCACCACAACGGTGGAACCCCTAAAAAGCCAAGAACTCCA ATGCTTAGAGAGATGAAGAAGAAGATGGGAGTTGTTGCCGGCGGGCCGCCGGAGTGGGACCAGCTGAGGAGGGTGCCGTCTGGGCCTGACCCATTGCACCACAACGGTGGAACCCCTAAAAAGCCAAGAACTCCA MLREMKKKMGVVAGGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP Homology
BLAST of MS002865 vs. NCBI nr
Match: KAG6583691.1 (hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.1 bits (170), Expect = 5.6e-09 Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of MS002865 vs. NCBI nr
Match: XP_038877536.1 (protein CLAVATA 3 [Benincasa hispida]) HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08 Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of MS002865 vs. NCBI nr
Match: KAE8652825.1 (hypothetical protein Csa_022700, partial [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08 Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of MS002865 vs. NCBI nr
Match: KAA0054350.1 (protein CLAVATA 3 [Cucumis melo var. makuwa] >TYK12387.1 protein CLAVATA 3 [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of MS002865 vs. NCBI nr
Match: KAG5566490.1 (hypothetical protein RHGRI_002148 [Rhododendron griersonianum]) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of MS002865 vs. ExPASy TrEMBL
Match: A0A5A7UGG1 (Protein CLAVATA 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001690 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07 Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of MS002865 vs. ExPASy TrEMBL
Match: A0A6P3ZEB5 (protein CLAVATA 3 OS=Ziziphus jujuba OX=326968 GN=LOC107410225 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-04 Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of MS002865 vs. ExPASy TrEMBL
Match: A0A1U8Q0C1 (uncharacterized protein LOC109114329 OS=Nelumbo nucifera OX=4432 GN=LOC109114329 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-04 Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of MS002865 vs. ExPASy TrEMBL
Match: A0A6I9U546 (protein CLAVATA 3 OS=Sesamum indicum OX=4182 GN=LOC105170063 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-04 Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of MS002865 vs. ExPASy TrEMBL
Match: A0A072UL07 (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=MTR_4g051618 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-04 Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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