MS002827 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAGCGCGGACGGCGGCGAGGATTGTTTCTCGAAGGTTCTCGAGCAGCGGTAAGATACTTAGCGAGGAAGAGAAGGCTGCCGAGAATGTCTACATCAAGGTGACCGTCTGGAGCCTCCGACCTGTGATTTTTGTGTGTTTGCCAAATGATTGTGTGCTTTTTAAAAATTTTTTTTTTGTTAGGTCGCGTTGGTTGTTTCATTCATTATAAATGATGAAATGGATAGAAAAGTATGGCGAATTTACTTGCTGTAAATATGTAGTATAGCTTGTTTTGAGTTTATCGAAGGATAGAGTTCTACAGTTTCGAATGAGTCTACTGTTCTCTTTTATTTTTCTGCTGTTCATTTTAATCTTTATTAGTATTATTTGGTATTAGAGACAGTTTCAAAGATATTGAGCGATCGGAGTCCCTTTGTGTTGGCGGCGAAAGTTCCTACGTCTGTTCGTAGGATCGGTACTATAATTTCAAGAGCGGTATTGCAGTATTTGGTGTCAAATAAAATGGCTTCGATCCTAATAGTGACGTGTGCAAAGATATCTTTCCCCTTTGAGGATGAGAGTTTTGTTCAAGGGAGGAGGAAAAAAACGATCATGTTTTACTTTATCAACTAGGCTTATCTTTAATTTTGAATAATTGGGTATTTAGATATGTTTTTAGGTTCGCATTTATCTTCTTATTAGTGATTTTCCTAATTTTAGGGATTTCTAATAGTTTGCTGTTTTTCATATGTTATCATATTTGAATGATGAAATGAGCGACAAAGTATGGAGAATTCACTTATGGGAAATGTACATGGTTTTGCCTTTTGATTTATTTGAAGAGTCAATAATGGCGGTCTAGACTCCCTCTAACAAGTGTACCATCCTTTTAAGTTTCTATTGCTCAATTGTATTTTTAATTTAGTATAGGCTCATACCTTATTTTGTCTAGTGGGTTAGATGGTGTTATTGAAGTAGAAGATTGGTTTTTGGATATTGCCATAGAGATTCATGACTTGGGAATTAAAACTACTTCTTTGTGGAGTTCTGTAGTTATTCATTTTGACATTACAATATAACTGAAAGCTTTTTCTAGTTAGTTGTATTTTCATTGTTCTTAATGAAAGTTTAGTTTATCAACATATATAACTGAATTTTTTAATGTGGGACATTTGTCTAAGTTGAAACATCAAATGGCGAACTCTTGGAGATTTTTCAACGCCAAGAGTTTGTTTTATGTATGAGTGTACATCCCACCTTTACCATCTACTTTCTTATGATGTCTTTAGTACATTTTCTCCATTCGTAGCTTATTGATTGTGATTTTGCAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGTATGCTTGTAGATCCTTAAAAATTCCGCTTGGGAACATGAGTTTGAAATTATTTGGATCTTGGATAATCTAGCTTTTCAGACTAAAATTTTATAATTCTTTTCATTGTTGTAAAACTATAATATTATCTTATTGAAGTAAAATTTTAGATGTCCTATGTAATTGACAAGGTTTGCAGTGAAAATAGATTTATCATTTTTATTGGGTAAACAGAGCCATTGATTGTGGTTTTAAAACATCTTATGCTTATACTAAGTGTTTTGATGGTTCTACGATATTATGTGAACCAATTTTTCAACAAATTAATTTTTGGAATGCTCATATGAGAGTGAACATTGATGAATGCCAAAGCAACTTGATTAAAGTAAATGGAAGTCGAAAACCACACTGGCCATTTATTTAGCTCCATTATCATATTTACTTTCCACTCGCTGCGGTGAATTCCTTGTACTTGAACATCTAGGTCTGTGGTAATATAATTTTATTTTCTTGAGTGAGAGTTAGATGTTCTAATCCTCCAGGCTACAAATGCCGAATGTTTCTAGGGACCTAAACCAGAAGAAAAGCCGGGAGGTTCAGCGGCTGATTCCATTCCAAGTGGCTCAGCCTCAGCATCAGCATCAGCATCAGCATCAGGAGCATCAACAGAGAAGATATCTACTGACAAACACCGCAATTACGCTGTTGTAGCGGGAACTGTGACTATTCTTGGTGCAGTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTC ATGGCAGCAGCGCGGACGGCGGCGAGGATTGTTTCTCGAAGGTTCTCGAGCAGCGGTAAGATACTTAGCGAGGAAGAGAAGGCTGCCGAGAATGTCTACATCAAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAAAAGCCGGGAGGTTCAGCGGCTGATTCCATTCCAAGTGGCTCAGCCTCAGCATCAGCATCAGCATCAGCATCAGGAGCATCAACAGAGAAGATATCTACTGACAAACACCGCAATTACGCTGTTGTAGCGGGAACTGTGACTATTCTTGGTGCAGTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTC ATGGCAGCAGCGCGGACGGCGGCGAGGATTGTTTCTCGAAGGTTCTCGAGCAGCGGTAAGATACTTAGCGAGGAAGAGAAGGCTGCCGAGAATGTCTACATCAAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAAAAGCCGGGAGGTTCAGCGGCTGATTCCATTCCAAGTGGCTCAGCCTCAGCATCAGCATCAGCATCAGCATCAGGAGCATCAACAGAGAAGATATCTACTGACAAACACCGCAATTACGCTGTTGTAGCGGGAACTGTGACTATTCTTGGTGCAGTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTC MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSAADSIPSGSASASASASASGASTEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEV Homology
BLAST of MS002827 vs. NCBI nr
Match: XP_022142661.1 (uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_022142662.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia]) HSP 1 Score: 198.4 bits (503), Expect = 3.6e-47 Identity = 114/119 (95.80%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of MS002827 vs. NCBI nr
Match: XP_008461298.1 (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo] >KAA0035485.1 uncharacterized protein E6C27_scaffold285G001350 [Cucumis melo var. makuwa] >TYK31040.1 uncharacterized protein E5676_scaffold455G002960 [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43 Identity = 110/123 (89.43%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of MS002827 vs. NCBI nr
Match: XP_038893784.1 (uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida] >XP_038893785.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 186.4 bits (472), Expect = 1.4e-43 Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of MS002827 vs. NCBI nr
Match: XP_022967119.1 (uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima]) HSP 1 Score: 178.7 bits (452), Expect = 2.9e-41 Identity = 103/119 (86.55%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of MS002827 vs. NCBI nr
Match: XP_038895664.1 (uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 178.3 bits (451), Expect = 3.8e-41 Identity = 104/119 (87.39%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of MS002827 vs. ExPASy Swiss-Prot
Match: Q9ZUX4 (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27730 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.6e-24 Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of MS002827 vs. ExPASy TrEMBL
Match: A0A6J1CMV3 (uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012716 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.7e-47 Identity = 114/119 (95.80%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of MS002827 vs. ExPASy TrEMBL
Match: A0A5A7T219 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002960 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 5.2e-44 Identity = 110/123 (89.43%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of MS002827 vs. ExPASy TrEMBL
Match: A0A1S3CEE3 (uncharacterized protein At2g27730, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499925 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 5.2e-44 Identity = 110/123 (89.43%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of MS002827 vs. ExPASy TrEMBL
Match: A0A6J1HVU8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466619 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41 Identity = 103/119 (86.55%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of MS002827 vs. ExPASy TrEMBL
Match: A0A6J1G0C8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449519 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.1e-41 Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of MS002827 vs. TAIR 10
Match: AT2G27730.1 (copper ion binding ) HSP 1 Score: 112.8 bits (281), Expect = 1.8e-25 Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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