MS002811 (gene) Bitter gourd (TR) v1

Overview


Name	MS002811
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pectin lyase-like superfamily protein, putative
Location	scaffold66: 814661 .. 816809 (+)
RNA-Seq Expression	MS002811
Synteny	MS002811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTGAAGAAATGTGGTGTTTTTAGGGTTTTTTTGGTTGGTTTTTTCTTGTTTTCCATCATAGAAGCTCATGGTGGTAAGGCCAAATTCTTCAATGTTGTCAACTATGGAGCAATCCCAGATGGAAAAACAGATAACAGTAAGGTAAATATACTAAAAGAATGAAAAAACATGTTTAGATAACTGTTTTTTCTTACTCGTAATAGGGTTATAGTTATTTTTCTAGTAGAATCGCATGTCTTTGTTTTTCCAAGCGACAACCCAAAAAATTGCACTTGAAAGTTGTTTCTTGGAATAAATCTTGAACTAGAGCAAAGTTGAAATGGGATTTTTAGGCATCTTTGAAGCATGTTTAGAACGAATGAAAATTTATGACATGTTTAGATAACCGTTCTTTCTTGCTCAATAGTTAGGGTTATAATTATTTTTTGGATAGAATCCCGAGATTAAGTAACGATCCAAAAATTATACTCTAAAGTTGTGAACTGTTCCCAATTTCATTGAGCAAAAATTGAAATGAGCTTTTCAAGAATTTTTGTAGAGGCATGTTAAGAAAATGAATGAAAAATTAAGGCAGATTTAGATAACTGTTTTTCTTACTCATATATGAAGACTTTGTAGTTATTTTACTTTTAGAATCACGAGATGATATTGTATCTCGATCCCAGATAAATATACTTAAAAGTTGTTTCGGAGAATAACTCTCGAATGATTATTTCGAACTCAATCTATCGAGAAAACTAAAATGGGTTTTTTTTTTTTTTTTTTTGGGAATTTTAGGCATTTTTGGAGGCATGGAGGGATGCATGTGGATGGAAGGGGAGGGGTAGGGTTTATATCCCAAAAGGAACATTCAAGTTGAGAAAAGTGCTTTTCTTGGGTCCATGTGAGGGCCAAACTGCTTTTGTGATAAAGGGGATTCTAAAGGCTCCTACCGACATGTCGTCTCTATCTGCTGATAGTTGGATCAACTTCCGATATGTCGATCGCTTGACTGTTTGTGGAGGTGGCTCCTTGGATGGTCAAGGTGCTATTGCTTGGCCAAGAAATGAGTGCAAAAAAACCCCTACTTGCCTCTCCCTTCCTACCGTAAGTTTTCCTATTTTCATTTCTCGTCTCTTTTGATAGATCTCTGAACTTTCAATGTCGTGTTTTAATACCTTTTAAAGTTTAAGGACTTAAAAGATACAAAATTGAAAGTTTAGAGACTTATTATACAATCTTAAAATTTTACTATAAACTTTTACTATAAACGTTTTTGTGATTTCTATGATTTTTTTAGACAATGAAATTCGATTTTGTCACGAATGGAAAAGTTCATAACTTGCGATCGATCAACAGCAAGAACAACCATTTCATGCTTTTCGGATGCAGCAAGATAAACATCACCAACATCCATATCTCCGCCCCCGGGGACAGCCCCAACACCGATGGAATAAAAATTGGAAACTCTGACAGCATCAACATAACAAACTCGATCATCGGCACCGGAGACGATTGCATTTCGATGCTGTCCGGGAGCAAGAACATCCAGGTCTCGAACGTGGTTTGCGGCCCGGGACATGGTATCAGTATAGGAAGCTTAGGGAAGTACGAGAATGAAGAGGATGTGATGGGGATTACAGTGAAGAATTGCACTTTCAGGAACACAACTGATGGTGTGAGAATCAAGACGTGGGCTTCATCTTCAACTGCGGATGCTTACAATATTCACTATGAGGATATTTTCATGGACAATGTTAGGAATCCCATCATCATTGATCAACAATATTGCCCCATTCCTCCATGCAATCAACAGGTAAATGTTTTTAAGTGAAGTATTTTTTCTGGTGTGAAATTGGTTCGGTTCGGTTGGGTTTAGTTAGATTTCGAGGGTGTCGTAGAAAACATAATTGATCGAGTCGGGTTTGTTTGGATGGAGTAGGTATCTTCAGGGGTGCAAATAAGCAATGTGAGATTCAAGAACATATGGGGAAGCAGCAGTTCAGTCACGGCAGAGACATTGAGATGCAGCAAAAGCAGGCCATGCAAGAACATTGTGCTTGAAGACATCAATCTCATCAGCTCTGACAATGGAAAGCTTTTTTCTTCTTGTTTTTATGTCAGTGGCTTCTCTTATGGCCATCAAAATCCCACTCCTTGCTTG

mRNA sequence

ATGGGTGTGAAGAAATGTGGTGTTTTTAGGGTTTTTTTGGTTGGTTTTTTCTTGTTTTCCATCATAGAAGCTCATGGTGGTAAGGCCAAATTCTTCAATGTTGTCAACTATGGAGCAATCCCAGATGGAAAAACAGATAACAGTAAGGCATTTTTGGAGGCATGGAGGGATGCATGTGGATGGAAGGGGAGGGGTAGGGTTTATATCCCAAAAGGAACATTCAAGTTGAGAAAAGTGCTTTTCTTGGGTCCATGTGAGGGCCAAACTGCTTTTGTGATAAAGGGGATTCTAAAGGCTCCTACCGACATGTCGTCTCTATCTGCTGATAGTTGGATCAACTTCCGATATGTCGATCGCTTGACTGTTTGTGGAGGTGGCTCCTTGGATGGTCAAGGTGCTATTGCTTGGCCAAGAAATGAGTGCAAAAAAACCCCTACTTGCCTCTCCCTTCCTACCACAATGAAATTCGATTTTGTCACGAATGGAAAAGTTCATAACTTGCGATCGATCAACAGCAAGAACAACCATTTCATGCTTTTCGGATGCAGCAAGATAAACATCACCAACATCCATATCTCCGCCCCCGGGGACAGCCCCAACACCGATGGAATAAAAATTGGAAACTCTGACAGCATCAACATAACAAACTCGATCATCGGCACCGGAGACGATTGCATTTCGATGCTGTCCGGGAGCAAGAACATCCAGGTCTCGAACGTGGTTTGCGGCCCGGGACATGGTATCAGTATAGGAAGCTTAGGGAAGTACGAGAATGAAGAGGATGTGATGGGGATTACAGTGAAGAATTGCACTTTCAGGAACACAACTGATGGTGTGAGAATCAAGACGTGGGCTTCATCTTCAACTGCGGATGCTTACAATATTCACTATGAGGATATTTTCATGGACAATGTTAGGAATCCCATCATCATTGATCAACAATATTGCCCCATTCCTCCATGCAATCAACAGGTATCTTCAGGGGTGCAAATAAGCAATGTGAGATTCAAGAACATATGGGGAAGCAGCAGTTCAGTCACGGCAGAGACATTGAGATGCAGCAAAAGCAGGCCATGCAAGAACATTGTGCTTGAAGACATCAATCTCATCAGCTCTGACAATGGAAAGCTTTTTTCTTCTTGTTTTTATGTCAGTGGCTTCTCTTATGGCCATCAAAATCCCACTCCTTGCTTG

Coding sequence (CDS)

ATGGGTGTGAAGAAATGTGGTGTTTTTAGGGTTTTTTTGGTTGGTTTTTTCTTGTTTTCCATCATAGAAGCTCATGGTGGTAAGGCCAAATTCTTCAATGTTGTCAACTATGGAGCAATCCCAGATGGAAAAACAGATAACAGTAAGGCATTTTTGGAGGCATGGAGGGATGCATGTGGATGGAAGGGGAGGGGTAGGGTTTATATCCCAAAAGGAACATTCAAGTTGAGAAAAGTGCTTTTCTTGGGTCCATGTGAGGGCCAAACTGCTTTTGTGATAAAGGGGATTCTAAAGGCTCCTACCGACATGTCGTCTCTATCTGCTGATAGTTGGATCAACTTCCGATATGTCGATCGCTTGACTGTTTGTGGAGGTGGCTCCTTGGATGGTCAAGGTGCTATTGCTTGGCCAAGAAATGAGTGCAAAAAAACCCCTACTTGCCTCTCCCTTCCTACCACAATGAAATTCGATTTTGTCACGAATGGAAAAGTTCATAACTTGCGATCGATCAACAGCAAGAACAACCATTTCATGCTTTTCGGATGCAGCAAGATAAACATCACCAACATCCATATCTCCGCCCCCGGGGACAGCCCCAACACCGATGGAATAAAAATTGGAAACTCTGACAGCATCAACATAACAAACTCGATCATCGGCACCGGAGACGATTGCATTTCGATGCTGTCCGGGAGCAAGAACATCCAGGTCTCGAACGTGGTTTGCGGCCCGGGACATGGTATCAGTATAGGAAGCTTAGGGAAGTACGAGAATGAAGAGGATGTGATGGGGATTACAGTGAAGAATTGCACTTTCAGGAACACAACTGATGGTGTGAGAATCAAGACGTGGGCTTCATCTTCAACTGCGGATGCTTACAATATTCACTATGAGGATATTTTCATGGACAATGTTAGGAATCCCATCATCATTGATCAACAATATTGCCCCATTCCTCCATGCAATCAACAGGTATCTTCAGGGGTGCAAATAAGCAATGTGAGATTCAAGAACATATGGGGAAGCAGCAGTTCAGTCACGGCAGAGACATTGAGATGCAGCAAAAGCAGGCCATGCAAGAACATTGTGCTTGAAGACATCAATCTCATCAGCTCTGACAATGGAAAGCTTTTTTCTTCTTGTTTTTATGTCAGTGGCTTCTCTTATGGCCATCAAAATCCCACTCCTTGCTTG

Protein sequence

MGVKKCGVFRVFLVGFFLFSIIEAHGGKAKFFNVVNYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIHYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINLISSDNGKLFSSCFYVSGFSYGHQNPTPCL

Homology

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BLAST of MS002811 vs. NCBI nr
Match: KAA0063000.1 (exopolygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 661.4 bits (1705), Expect = 5.0e-186
Identity = 319/404 (78.96%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSI--IEAH---GGKAKFFNVVNYGAIPDGKTDNSKAFLEAW 60
           MG+KKC VF VFL+G  LFSI  +EAH    GK KFFNVVNYGAIPDG TDNSKAFL+AW
Sbjct: 1   MGLKKCYVFEVFLIGLLLFSIQELEAHNYAAGKPKFFNVVNYGAIPDGMTDNSKAFLKAW 60

Query: 61  RDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFR 120
            DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAF+IKGILKA TDMSSL  DSWINFR
Sbjct: 61  NDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFIIKGILKASTDMSSLYGDSWINFR 120

Query: 121 YVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNN 180
           YVDRLTV GGGSLDGQGAIAWPRN+CK  P C SLPTTMK DF+TN KVHNLRSI+SKN+
Sbjct: 121 YVDRLTVGGGGSLDGQGAIAWPRNDCKNNPNCQSLPTTMKLDFITNSKVHNLRSIDSKNS 180

Query: 181 HFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNI 240
           HF LFGCSK+NITNI ISAPGDSPNTDGIKIG+SD I+I NSIIGTGDDCIS+LSGSKN+
Sbjct: 181 HFTLFGCSKMNITNIRISAPGDSPNTDGIKIGSSDRIDIRNSIIGTGDDCISILSGSKNL 240

Query: 241 QVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNI 300
            +SNVVCGPGHGISIGSLGKY++EEDVMGITVKNCTF+NTTDGVRIKTWA+ S  +AYNI
Sbjct: 241 YISNVVCGPGHGISIGSLGKYKDEEDVMGITVKNCTFKNTTDGVRIKTWAAPSMGNAYNI 300

Query: 301 HYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSK 360
           +YEDIFMD V NPIIIDQ+YCP+ PCNQQ SS +QIS V FKNIWGSS S +A TLRCSK
Sbjct: 301 YYEDIFMDGVENPIIIDQEYCPVSPCNQQESSRIQISYVTFKNIWGSSKSASAVTLRCSK 360

Query: 361 SRPCKNIVLEDINLISS-DNGKLFSSCFYVSGFSYGHQNPTPCL 399
            +PCKNIVL++INL+SS D G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 361 RKPCKNIVLDNINLMSSPDVGQLFSSCFHVHGFSYGNQSPYSCL 404

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BLAST of MS002811 vs. NCBI nr
Match: XP_016901151.1 (PREDICTED: exopolygalacturonase [Cucumis melo] >TYK16348.1 exopolygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 661.0 bits (1704), Expect = 6.5e-186
Identity = 318/404 (78.71%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSI--IEAH---GGKAKFFNVVNYGAIPDGKTDNSKAFLEAW 60
           MG+KKC VF +FL+G  LFSI  +EAH    GK KFFNVVNYGAIPDG TDNSKAFL+AW
Sbjct: 1   MGLKKCYVFEIFLIGLLLFSIQELEAHNYAAGKPKFFNVVNYGAIPDGMTDNSKAFLKAW 60

Query: 61  RDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFR 120
            DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAF+IKGILKA TDMSSL  DSWINFR
Sbjct: 61  NDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFIIKGILKASTDMSSLYGDSWINFR 120

Query: 121 YVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNN 180
           YVDRLTV GGGSLDGQGAIAWPRN+CK  P C SLPTTMK DF+TN KVHNLRSI+SKN+
Sbjct: 121 YVDRLTVGGGGSLDGQGAIAWPRNDCKNNPNCQSLPTTMKLDFITNSKVHNLRSIDSKNS 180

Query: 181 HFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNI 240
           HF LFGCSK+NITNI ISAPGDSPNTDGIKIG+SD I+I NSIIGTGDDCIS+LSGSKN+
Sbjct: 181 HFTLFGCSKMNITNIRISAPGDSPNTDGIKIGSSDRIDIRNSIIGTGDDCISILSGSKNL 240

Query: 241 QVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNI 300
            +SNVVCGPGHGISIGSLGKY++EEDVMGITVKNCTF+NTTDGVRIKTWA+ S  +AYNI
Sbjct: 241 YISNVVCGPGHGISIGSLGKYKDEEDVMGITVKNCTFKNTTDGVRIKTWATPSMGNAYNI 300

Query: 301 HYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSK 360
           +YEDIFMD V NPIIIDQ+YCP+ PCNQQ SS +QIS V FKNIWGSS S +A TLRCSK
Sbjct: 301 YYEDIFMDGVENPIIIDQEYCPVSPCNQQESSRIQISYVTFKNIWGSSKSASAVTLRCSK 360

Query: 361 SRPCKNIVLEDINLISS-DNGKLFSSCFYVSGFSYGHQNPTPCL 399
            +PCKNIVL++INL+SS D G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 361 RKPCKNIVLDNINLMSSPDVGQLFSSCFHVHGFSYGNQSPYSCL 404

[Close]

BLAST of MS002811 vs. NCBI nr
Match: XP_011654343.2 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 651.7 bits (1680), Expect = 4.0e-183
Identity = 315/403 (78.16%), Postives = 345/403 (85.61%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSIIEA----HGGKAKFFNVVNYGAIPDGKTDNSKAFLEAWR 60
           MG+KKC VF VF + FFLFSI E     + G  KFFNVV YGAIPDGKTDNSKAFL+AW 
Sbjct: 36  MGLKKCYVFVVFFIAFFLFSIQELEAYNYAGIPKFFNVVKYGAIPDGKTDNSKAFLKAWN 95

Query: 61  DACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRY 120
           DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAFV+KGILKA TDMSSL  DSWINFRY
Sbjct: 96  DACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFVVKGILKASTDMSSLYGDSWINFRY 155

Query: 121 VDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNH 180
           VD LTV GGGSLDGQGAIAWPRN+C+  P C SLPTTMKFDF+TN KVHNLRSI+SKNNH
Sbjct: 156 VDSLTVGGGGSLDGQGAIAWPRNDCRNNPNCRSLPTTMKFDFITNSKVHNLRSIDSKNNH 215

Query: 181 FMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQ 240
           FMLFGCS INITNI ISAPGDSPNTDGIKIG SD I+I NSIIGTGDDCISMLSGSKNI 
Sbjct: 216 FMLFGCSNINITNIRISAPGDSPNTDGIKIGTSDHIDIRNSIIGTGDDCISMLSGSKNIY 275

Query: 241 VSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIH 300
           +SNVVCGPGHGISIGSLGKY+ EE+VMGITVKNCTF+NTTDGVRIKTWA+     AYNI+
Sbjct: 276 ISNVVCGPGHGISIGSLGKYKEEENVMGITVKNCTFKNTTDGVRIKTWATPLMGTAYNIY 335

Query: 301 YEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKS 360
           YEDIFMD V NPIIIDQ+YCP+ PCN   SS +QIS V FKNIWGSS S +A TLRCS+ 
Sbjct: 336 YEDIFMDGVANPIIIDQEYCPVSPCNHDESSRIQISYVTFKNIWGSSKSASAVTLRCSER 395

Query: 361 RPCKNIVLEDINLISSDN-GKLFSSCFYVSGFSYGHQNPTPCL 399
           +PCKNIVL++INLISS N G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 396 KPCKNIVLDNINLISSPNVGRLFSSCFHVHGFSYGNQSPYSCL 438

[Close]

BLAST of MS002811 vs. NCBI nr
Match: KAE8649244.1 (hypothetical protein Csa_014726 [Cucumis sativus])

HSP 1 Score: 651.7 bits (1680), Expect = 4.0e-183
Identity = 315/403 (78.16%), Postives = 345/403 (85.61%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSIIEA----HGGKAKFFNVVNYGAIPDGKTDNSKAFLEAWR 60
           MG+KKC VF VF + FFLFSI E     + G  KFFNVV YGAIPDGKTDNSKAFL+AW 
Sbjct: 1   MGLKKCYVFVVFFIAFFLFSIQELEAYNYAGIPKFFNVVKYGAIPDGKTDNSKAFLKAWN 60

Query: 61  DACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRY 120
           DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAFV+KGILKA TDMSSL  DSWINFRY
Sbjct: 61  DACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFVVKGILKASTDMSSLYGDSWINFRY 120

Query: 121 VDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNH 180
           VD LTV GGGSLDGQGAIAWPRN+C+  P C SLPTTMKFDF+TN KVHNLRSI+SKNNH
Sbjct: 121 VDSLTVGGGGSLDGQGAIAWPRNDCRNNPNCRSLPTTMKFDFITNSKVHNLRSIDSKNNH 180

Query: 181 FMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQ 240
           FMLFGCS INITNI ISAPGDSPNTDGIKIG SD I+I NSIIGTGDDCISMLSGSKNI 
Sbjct: 181 FMLFGCSNINITNIRISAPGDSPNTDGIKIGTSDHIDIRNSIIGTGDDCISMLSGSKNIY 240

Query: 241 VSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIH 300
           +SNVVCGPGHGISIGSLGKY+ EE+VMGITVKNCTF+NTTDGVRIKTWA+     AYNI+
Sbjct: 241 ISNVVCGPGHGISIGSLGKYKEEENVMGITVKNCTFKNTTDGVRIKTWATPLMGTAYNIY 300

Query: 301 YEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKS 360
           YEDIFMD V NPIIIDQ+YCP+ PCN   SS +QIS V FKNIWGSS S +A TLRCS+ 
Sbjct: 301 YEDIFMDGVANPIIIDQEYCPVSPCNHDESSRIQISYVTFKNIWGSSKSASAVTLRCSER 360

Query: 361 RPCKNIVLEDINLISSDN-GKLFSSCFYVSGFSYGHQNPTPCL 399
           +PCKNIVL++INLISS N G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 361 KPCKNIVLDNINLISSPNVGRLFSSCFHVHGFSYGNQSPYSCL 403

[Close]

BLAST of MS002811 vs. NCBI nr
Match: XP_022942235.1 (exopolygalacturonase-like [Cucurbita moschata] >KAG7031123.1 Exopolygalacturonase-like 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 639.0 bits (1647), Expect = 2.7e-179
Identity = 305/402 (75.87%), Postives = 348/402 (86.57%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSIIEAHG---GKAKFFNVVNYGAIPDGKTDNSKAFLEAWRD 60
           MG+KKCGV R   V FFLF      G   G+ K FNVV YGAIPDG TDNSKAFLEAW+D
Sbjct: 1   MGLKKCGVVRGLSVVFFLFLFSITEGVRVGRPKIFNVVRYGAIPDGTTDNSKAFLEAWKD 60

Query: 61  ACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYV 120
           AC WKGRGRVY+PKGTFKL+ VLFLGPCEGQ AFVIKGILKAPTDMS L++DSWINFRYV
Sbjct: 61  ACEWKGRGRVYVPKGTFKLKSVLFLGPCEGQMAFVIKGILKAPTDMSFLASDSWINFRYV 120

Query: 121 DRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHF 180
           D+L+V GGGSLDG+G++AWPRNECKK P C SLPTTM+FDF+TN KVH++ S NSKNNHF
Sbjct: 121 DQLSVSGGGSLDGEGSVAWPRNECKKNPNCQSLPTTMRFDFITNSKVHHVHSTNSKNNHF 180

Query: 181 MLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQV 240
           +LFGCSK+NIT I ISAP DSPNTDGIKIGNSD+I+ITNSIIGTGDDCIS+LSGS +I V
Sbjct: 181 LLFGCSKMNITKIRISAPSDSPNTDGIKIGNSDNIDITNSIIGTGDDCISILSGSNDIYV 240

Query: 241 SNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIHY 300
           SNV+CGPGHGISIGSLGKY+ +EDV GITV+NCTF++TTDGVRIKTWA+S+  +AYNIHY
Sbjct: 241 SNVICGPGHGISIGSLGKYD-KEDVSGITVRNCTFKDTTDGVRIKTWATSANVNAYNIHY 300

Query: 301 EDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSR 360
           EDIFM+ V NPIIIDQQYCP+PPC+Q+ SSGVQISNV FKNIWG S S +A TLRCSK+R
Sbjct: 301 EDIFMNEVGNPIIIDQQYCPVPPCDQRTSSGVQISNVTFKNIWGRSKSASAVTLRCSKTR 360

Query: 361 PCKNIVLEDINLISSDN-GKLFSSCFYVSGFSYGHQNPTPCL 399
           PCK+IVLEDI+L SS   G++FSSC  V GFSYG+Q+P PCL
Sbjct: 361 PCKDIVLEDIHLKSSPKVGQIFSSCSNVYGFSYGYQSPRPCL 401

[Close]

BLAST of MS002811 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.4e-92
Identity = 165/364 (45.33%), Postives = 223/364 (61.26%), Query Frame = 0


Query: 34  VVNYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVI 93
           V  +GA  DGKTD SK FL+AW++AC       V IPKGT+ L KV   GPC+      +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 94  KGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTT 153
           +G ++AP D S+    +W+ F  V+   + GGG  DGQG+IA+ +N C+       LP  
Sbjct: 92  QGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVN 151

Query: 154 MKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSIN 213
           ++FDFVTN  + ++ S +SK  H  +F C  I +  + I AP +SPNTDGI +G S+ +N
Sbjct: 152 IRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 214 ITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFR 273
           I  S I TGDDCIS+  G+KN+ +  + CGPGHGISIGSLGK++NEE V GI + NCT  
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTIT 271

Query: 274 NTTDGVRIKTWASSSTADAYNIHYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISN 333
           NT++G RIKTW          IH+EDI M+NV +PI+IDQQYCP   C +   S V++SN
Sbjct: 272 NTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSN 331

Query: 334 VRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINLISSDNGKLFSSCFYVSGFSYGHQN 393
           + FKNI G+S+   A    CS S PC+N+ L DI++  +      S C  V   + G  N
Sbjct: 332 ISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEPATSQCLNVKPITIGKLN 391

Query: 394 PTPC 398
           P PC
Sbjct: 392 PIPC 395

[Close]

BLAST of MS002811 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 7.4e-92
Identity = 169/381 (44.36%), Postives = 231/381 (60.63%), Query Frame = 0


Query: 18  LFSIIEAHGGKAKFFNVV-NYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKL 77
           L   I A   ++  F+VV  +GA  DGKTD SK FL+AW++AC       V IPKGT+ L
Sbjct: 15  LLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLL 74

Query: 78  RKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAIAW 137
            KV   GPC+      ++G ++AP D S+    +W+ F  V+   + GGG  DGQG+IA+
Sbjct: 75  SKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAY 134

Query: 138 PRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPG 197
            +N C+       LP  ++FDF+TN  + ++ S +SK  H  +F C  I +  + I AP 
Sbjct: 135 EKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPD 194

Query: 198 DSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKY 257
           +SPNTDGI +G S+ +NI  S I TGDDCIS+  G+KN+ +  + CGPGHGISIGSLGK+
Sbjct: 195 ESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKF 254

Query: 258 ENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIHYEDIFMDNVRNPIIIDQQYC 317
           +NEE V GI + NCT  NT++G RIKTW          IH+EDI M+NV +PI+IDQQYC
Sbjct: 255 QNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYC 314

Query: 318 PIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINLISSDNGK 377
           P   C +   S V++SN+ FKNI G+S+   A    CS S PC+N+ L DI++  +    
Sbjct: 315 PWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEP 374

Query: 378 LFSSCFYVSGFSYGHQNPTPC 398
             S C  V   + G  NP PC
Sbjct: 375 ATSQCLNVKPITSGKLNPIPC 395

[Close]

BLAST of MS002811 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.7e-91
Identity = 163/365 (44.66%), Postives = 231/365 (63.29%), Query Frame = 0


Query: 32  FNVVNYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKLRKVLFLGPCEG-QTA 91
           FNV +YGA   G  D S+A ++AW+ AC  +G   V IPKG + + +V   GPC+G +  
Sbjct: 10  FNVNDYGA--KGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIG 69

Query: 92  FVIKGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSL 151
           F I G++KAP D S   +D W++F  +D LTV G G+LDGQG  AW +N C K P C   
Sbjct: 70  FQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHA 129

Query: 152 PTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSD 211
              ++FDF+ +  V ++ S+NSK  H  +  C  I   ++ ++APG S NTDGI +G S 
Sbjct: 130 AMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISK 189

Query: 212 SINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNC 271
            + ITN+ I TGDDCIS+  GS+N+ ++ V CGPGHGISIGSLG+Y NE++V GITVK C
Sbjct: 190 GVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGC 249

Query: 272 TFRNTTDGVRIKTWASSSTADAYNIHYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQ 331
           TF  T +GVR+KTW +S    A ++ ++D+ M+NV+NP+I+DQ+YCP   C++Q  S ++
Sbjct: 250 TFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIK 309

Query: 332 ISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINL-ISSDNGKLFSSCFYVSGFSY 391
           +SN+ F NI G+S+   A  + CS   PC N+ + +INL      G   S+C  V     
Sbjct: 310 LSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFS 369

Query: 392 GHQNP 395
           G Q P
Sbjct: 370 GKQVP 372

[Close]

BLAST of MS002811 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.7e-86
Identity = 165/398 (41.46%), Postives = 230/398 (57.79%), Query Frame = 0


Query: 16  FFLFSIIEAHGGKAK-------------FFNVVNYGAIPDGKTDNSKAFLEAWRDACGWK 75
           F L      HG KAK              F++   GA  +GKTD++KA  EAW  ACG  
Sbjct: 12  FLLALFCVVHGEKAKSKDNDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGT 71

Query: 76  GRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSL-SADSWINFRYVDRLT 135
           G+  + IPKG F +  + F GPC+G     + G L A TD+S      +WI    VD L 
Sbjct: 72  GKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLV 131

Query: 136 VCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFG 195
           + G G LDGQG   W +N C K   C  LP ++  DFV NG+V  +  +NSK  H  ++ 
Sbjct: 132 ITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYK 191

Query: 196 CSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVV 255
           C  + I +++++APGDSPNTDGI +G+S  + ITN++IG GDDCIS+  G+  + ++ V 
Sbjct: 192 CKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVT 251

Query: 256 CGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWA-SSSTADAYNIHYEDI 315
           CGPGHGISIGSLG+Y++E+DV  I VK+CT + T +GVRIK +  ++S   A  IHYE+I
Sbjct: 252 CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENI 311

Query: 316 FMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSRPCK 375
            M++   PIIID +YCP   C    +S V + +V FKNI G+SS+  A  L C+   PC 
Sbjct: 312 KMEDSGYPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCT 371

Query: 376 NIVLEDINL-ISSDNGKLFSSCFYVSGFSYGHQNPTPC 398
            + ++D+N+  S  N K  + C    G + G      C
Sbjct: 372 GVTMDDVNIKYSGTNNKTMAVCKNAKGSAKGCLKELAC 409

[Close]

BLAST of MS002811 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 6.1e-86
Identity = 159/374 (42.51%), Postives = 224/374 (59.89%), Query Frame = 0


Query: 27  GKAKFFNVVNYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKLRKVLFLGPCE 86
           G    F++   GA  +GKTD++KA  EAW  ACG  G+  + IPKG F + ++ F GPC+
Sbjct: 36  GPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCK 95

Query: 87  GQTAFVIKGILKAPTDMSSL-SADSWINFRYVDRLTVCGGGSLDGQGAIAWPRNECKKTP 146
           G     + G L A TD+S      +WI    VD L + G G+LDGQG   W +N C K  
Sbjct: 96  GDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKY 155

Query: 147 TCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPGDSPNTDGIK 206
            C  LP ++  DFV NG+V  +  +NSK  H  ++ C  + I ++ ++APGDSPNTDGI 
Sbjct: 156 DCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIH 215

Query: 207 IGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKYENEEDVMGI 266
           +G+S  I ITN++IG GDDCIS+  G+  + ++ V CGPGHGISIGSLG+Y++E+DV  I
Sbjct: 216 MGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDI 275

Query: 267 TVKNCTFRNTTDGVRIKTWA-SSSTADAYNIHYEDIFMDNVRNPIIIDQQYCPIPPCNQQ 326
            VK+CT + T  GVRIK +  ++S      IHYE+I M++  NPI ID +YCP   C   
Sbjct: 276 NVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTAN 335

Query: 327 VSSGVQISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINL-ISSDNGKLFSSCFY 386
            +S V + +V FKNI G+SS+  A +L C+   PC  + ++D+N+  S  N K  + C  
Sbjct: 336 GASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTN 395

Query: 387 VSGFSYGHQNPTPC 398
             G + G      C
Sbjct: 396 AKGSTKGCLKELAC 409

[Close]

BLAST of MS002811 vs. ExPASy TrEMBL
Match: A0A5A7V6Y6 (Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001010 PE=3 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.4e-186
Identity = 319/404 (78.96%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSI--IEAH---GGKAKFFNVVNYGAIPDGKTDNSKAFLEAW 60
           MG+KKC VF VFL+G  LFSI  +EAH    GK KFFNVVNYGAIPDG TDNSKAFL+AW
Sbjct: 1   MGLKKCYVFEVFLIGLLLFSIQELEAHNYAAGKPKFFNVVNYGAIPDGMTDNSKAFLKAW 60

Query: 61  RDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFR 120
            DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAF+IKGILKA TDMSSL  DSWINFR
Sbjct: 61  NDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFIIKGILKASTDMSSLYGDSWINFR 120

Query: 121 YVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNN 180
           YVDRLTV GGGSLDGQGAIAWPRN+CK  P C SLPTTMK DF+TN KVHNLRSI+SKN+
Sbjct: 121 YVDRLTVGGGGSLDGQGAIAWPRNDCKNNPNCQSLPTTMKLDFITNSKVHNLRSIDSKNS 180

Query: 181 HFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNI 240
           HF LFGCSK+NITNI ISAPGDSPNTDGIKIG+SD I+I NSIIGTGDDCIS+LSGSKN+
Sbjct: 181 HFTLFGCSKMNITNIRISAPGDSPNTDGIKIGSSDRIDIRNSIIGTGDDCISILSGSKNL 240

Query: 241 QVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNI 300
            +SNVVCGPGHGISIGSLGKY++EEDVMGITVKNCTF+NTTDGVRIKTWA+ S  +AYNI
Sbjct: 241 YISNVVCGPGHGISIGSLGKYKDEEDVMGITVKNCTFKNTTDGVRIKTWAAPSMGNAYNI 300

Query: 301 HYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSK 360
           +YEDIFMD V NPIIIDQ+YCP+ PCNQQ SS +QIS V FKNIWGSS S +A TLRCSK
Sbjct: 301 YYEDIFMDGVENPIIIDQEYCPVSPCNQQESSRIQISYVTFKNIWGSSKSASAVTLRCSK 360

Query: 361 SRPCKNIVLEDINLISS-DNGKLFSSCFYVSGFSYGHQNPTPCL 399
            +PCKNIVL++INL+SS D G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 361 RKPCKNIVLDNINLMSSPDVGQLFSSCFHVHGFSYGNQSPYSCL 404

[Close]

BLAST of MS002811 vs. ExPASy TrEMBL
Match: A0A5D3CYK2 (Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001310 PE=3 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 3.2e-186
Identity = 318/404 (78.71%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSI--IEAH---GGKAKFFNVVNYGAIPDGKTDNSKAFLEAW 60
           MG+KKC VF +FL+G  LFSI  +EAH    GK KFFNVVNYGAIPDG TDNSKAFL+AW
Sbjct: 1   MGLKKCYVFEIFLIGLLLFSIQELEAHNYAAGKPKFFNVVNYGAIPDGMTDNSKAFLKAW 60

Query: 61  RDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFR 120
            DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAF+IKGILKA TDMSSL  DSWINFR
Sbjct: 61  NDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFIIKGILKASTDMSSLYGDSWINFR 120

Query: 121 YVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNN 180
           YVDRLTV GGGSLDGQGAIAWPRN+CK  P C SLPTTMK DF+TN KVHNLRSI+SKN+
Sbjct: 121 YVDRLTVGGGGSLDGQGAIAWPRNDCKNNPNCQSLPTTMKLDFITNSKVHNLRSIDSKNS 180

Query: 181 HFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNI 240
           HF LFGCSK+NITNI ISAPGDSPNTDGIKIG+SD I+I NSIIGTGDDCIS+LSGSKN+
Sbjct: 181 HFTLFGCSKMNITNIRISAPGDSPNTDGIKIGSSDRIDIRNSIIGTGDDCISILSGSKNL 240

Query: 241 QVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNI 300
            +SNVVCGPGHGISIGSLGKY++EEDVMGITVKNCTF+NTTDGVRIKTWA+ S  +AYNI
Sbjct: 241 YISNVVCGPGHGISIGSLGKYKDEEDVMGITVKNCTFKNTTDGVRIKTWATPSMGNAYNI 300

Query: 301 HYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSK 360
           +YEDIFMD V NPIIIDQ+YCP+ PCNQQ SS +QIS V FKNIWGSS S +A TLRCSK
Sbjct: 301 YYEDIFMDGVENPIIIDQEYCPVSPCNQQESSRIQISYVTFKNIWGSSKSASAVTLRCSK 360

Query: 361 SRPCKNIVLEDINLISS-DNGKLFSSCFYVSGFSYGHQNPTPCL 399
            +PCKNIVL++INL+SS D G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 361 RKPCKNIVLDNINLMSSPDVGQLFSSCFHVHGFSYGNQSPYSCL 404

[Close]

BLAST of MS002811 vs. ExPASy TrEMBL
Match: A0A1S4DYT5 (exopolygalacturonase OS=Cucumis melo OX=3656 GN=LOC103493242 PE=3 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 3.2e-186
Identity = 318/404 (78.71%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSI--IEAH---GGKAKFFNVVNYGAIPDGKTDNSKAFLEAW 60
           MG+KKC VF +FL+G  LFSI  +EAH    GK KFFNVVNYGAIPDG TDNSKAFL+AW
Sbjct: 1   MGLKKCYVFEIFLIGLLLFSIQELEAHNYAAGKPKFFNVVNYGAIPDGMTDNSKAFLKAW 60

Query: 61  RDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFR 120
            DAC WKGRGRVY+PKGTFKL +VLFLGPCEG TAF+IKGILKA TDMSSL  DSWINFR
Sbjct: 61  NDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGHTAFIIKGILKASTDMSSLYGDSWINFR 120

Query: 121 YVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNN 180
           YVDRLTV GGGSLDGQGAIAWPRN+CK  P C SLPTTMK DF+TN KVHNLRSI+SKN+
Sbjct: 121 YVDRLTVGGGGSLDGQGAIAWPRNDCKNNPNCQSLPTTMKLDFITNSKVHNLRSIDSKNS 180

Query: 181 HFMLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNI 240
           HF LFGCSK+NITNI ISAPGDSPNTDGIKIG+SD I+I NSIIGTGDDCIS+LSGSKN+
Sbjct: 181 HFTLFGCSKMNITNIRISAPGDSPNTDGIKIGSSDRIDIRNSIIGTGDDCISILSGSKNL 240

Query: 241 QVSNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNI 300
            +SNVVCGPGHGISIGSLGKY++EEDVMGITVKNCTF+NTTDGVRIKTWA+ S  +AYNI
Sbjct: 241 YISNVVCGPGHGISIGSLGKYKDEEDVMGITVKNCTFKNTTDGVRIKTWATPSMGNAYNI 300

Query: 301 HYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSK 360
           +YEDIFMD V NPIIIDQ+YCP+ PCNQQ SS +QIS V FKNIWGSS S +A TLRCSK
Sbjct: 301 YYEDIFMDGVENPIIIDQEYCPVSPCNQQESSRIQISYVTFKNIWGSSKSASAVTLRCSK 360

Query: 361 SRPCKNIVLEDINLISS-DNGKLFSSCFYVSGFSYGHQNPTPCL 399
            +PCKNIVL++INL+SS D G+LFSSCF+V GFSYG+Q+P  CL
Sbjct: 361 RKPCKNIVLDNINLMSSPDVGQLFSSCFHVHGFSYGNQSPYSCL 404

[Close]

BLAST of MS002811 vs. ExPASy TrEMBL
Match: A0A6J1J1C3 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111480430 PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.3e-179
Identity = 306/402 (76.12%), Postives = 350/402 (87.06%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSIIEAHG---GKAKFFNVVNYGAIPDGKTDNSKAFLEAWRD 60
           MG+KKCGV R   V FFLF      G   G++K FNVV YGAIPDG TDNS+AFLEAW+D
Sbjct: 1   MGLKKCGVVRGLSVVFFLFLFSITKGVRVGRSKVFNVVRYGAIPDGTTDNSEAFLEAWKD 60

Query: 61  ACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYV 120
           AC WKGRGRVY+PKGTFKLR VLFLGPCEGQ AFVIKGILKAPTDMS L++DSW+NFRYV
Sbjct: 61  ACEWKGRGRVYVPKGTFKLRSVLFLGPCEGQMAFVIKGILKAPTDMSFLASDSWMNFRYV 120

Query: 121 DRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHF 180
           D+LTV GGGSLDG+G++AWPRNECKK P C SLPTTM+FDF+TN KVH++ S NSKNNHF
Sbjct: 121 DQLTVSGGGSLDGEGSVAWPRNECKKNPNCQSLPTTMRFDFITNSKVHHVHSTNSKNNHF 180

Query: 181 MLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQV 240
           +LFGCSK+NIT I ISAP +SPNTDGIKIGNS++I+ITNSIIGTGDDCIS+LSGS +I V
Sbjct: 181 LLFGCSKMNITKIRISAPSESPNTDGIKIGNSNNIDITNSIIGTGDDCISILSGSNDIYV 240

Query: 241 SNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIHY 300
           SNVVCGPGHGISIGSLGKY+ +EDV GIT++NCTF+NTTDGVRIKTWA+SS  +AYNIHY
Sbjct: 241 SNVVCGPGHGISIGSLGKYD-KEDVSGITMRNCTFKNTTDGVRIKTWATSSNVNAYNIHY 300

Query: 301 EDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSR 360
           EDIFM+ V NPIIIDQQYCP+PPC+Q++SSGVQISNV FKNIWGSS S +A TLRCSK+R
Sbjct: 301 EDIFMNEVGNPIIIDQQYCPVPPCDQRMSSGVQISNVTFKNIWGSSKSASAVTLRCSKTR 360

Query: 361 PCKNIVLEDINLISSDN-GKLFSSCFYVSGFSYGHQNPTPCL 399
           PCK+IVLEDI L SS   G++FSSC  V GFSYG+Q+P PCL
Sbjct: 361 PCKDIVLEDIYLKSSPKVGQIFSSCSNVYGFSYGYQSPRPCL 401

[Close]

BLAST of MS002811 vs. ExPASy TrEMBL
Match: A0A6J1FVW3 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111447346 PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.3e-179
Identity = 305/402 (75.87%), Postives = 348/402 (86.57%), Query Frame = 0


Query: 1   MGVKKCGVFRVFLVGFFLFSIIEAHG---GKAKFFNVVNYGAIPDGKTDNSKAFLEAWRD 60
           MG+KKCGV R   V FFLF      G   G+ K FNVV YGAIPDG TDNSKAFLEAW+D
Sbjct: 1   MGLKKCGVVRGLSVVFFLFLFSITEGVRVGRPKIFNVVRYGAIPDGTTDNSKAFLEAWKD 60

Query: 61  ACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYV 120
           AC WKGRGRVY+PKGTFKL+ VLFLGPCEGQ AFVIKGILKAPTDMS L++DSWINFRYV
Sbjct: 61  ACEWKGRGRVYVPKGTFKLKSVLFLGPCEGQMAFVIKGILKAPTDMSFLASDSWINFRYV 120

Query: 121 DRLTVCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHF 180
           D+L+V GGGSLDG+G++AWPRNECKK P C SLPTTM+FDF+TN KVH++ S NSKNNHF
Sbjct: 121 DQLSVSGGGSLDGEGSVAWPRNECKKNPNCQSLPTTMRFDFITNSKVHHVHSTNSKNNHF 180

Query: 181 MLFGCSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQV 240
           +LFGCSK+NIT I ISAP DSPNTDGIKIGNSD+I+ITNSIIGTGDDCIS+LSGS +I V
Sbjct: 181 LLFGCSKMNITKIRISAPSDSPNTDGIKIGNSDNIDITNSIIGTGDDCISILSGSNDIYV 240

Query: 241 SNVVCGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASSSTADAYNIHY 300
           SNV+CGPGHGISIGSLGKY+ +EDV GITV+NCTF++TTDGVRIKTWA+S+  +AYNIHY
Sbjct: 241 SNVICGPGHGISIGSLGKYD-KEDVSGITVRNCTFKDTTDGVRIKTWATSANVNAYNIHY 300

Query: 301 EDIFMDNVRNPIIIDQQYCPIPPCNQQVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSR 360
           EDIFM+ V NPIIIDQQYCP+PPC+Q+ SSGVQISNV FKNIWG S S +A TLRCSK+R
Sbjct: 301 EDIFMNEVGNPIIIDQQYCPVPPCDQRTSSGVQISNVTFKNIWGRSKSASAVTLRCSKTR 360

Query: 361 PCKNIVLEDINLISSDN-GKLFSSCFYVSGFSYGHQNPTPCL 399
           PCK+IVLEDI+L SS   G++FSSC  V GFSYG+Q+P PCL
Sbjct: 361 PCKDIVLEDIHLKSSPKVGQIFSSCSNVYGFSYGYQSPRPCL 401

[Close]

BLAST of MS002811 vs. TAIR 10
Match: AT1G78400.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 385.2 bits (988), Expect = 6.4e-107
Identity = 187/371 (50.40%), Postives = 256/371 (69.00%), Query Frame = 0


Query: 30  KFFNVVNYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKLRKVLFLGPCEGQT 89
           K F+V +YGA  DGKTDN+ AF +AW+DAC WKG  RVYIP GTF L  V F GPC+ + 
Sbjct: 33  KVFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRI 92

Query: 90  AFVIKGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAIAWPRNECKKTPTCLS 149
           +F+IKG L AP D +++  DSWI FRYVD LTV GGG LDGQG+ +WP N C++T  C +
Sbjct: 93  SFIIKGTLLAPKDPNAIKQDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCRA 152

Query: 150 LPTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPGDSPNTDGIKIGNS 209
           LP  M F FV   ++  ++SINSK  H   F     +IT ++I APGDSPNTDGIKIG+S
Sbjct: 153 LPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSS 212

Query: 210 DSINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKYENEEDVMGITVKN 269
           + + I +  I TGDDCI++LSG+ N+ ++ V CGPGHGIS+GSLGK++ E+ V G+ V+N
Sbjct: 213 NHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRN 272

Query: 270 CTFRNTTDGVRIKTWASSSTAD-AYNIHYEDIFMDNVRNPIIIDQQYCPIPPCNQQVSSG 329
             F  T++GVRIKTW S    +   N  ++++ M +V++PI IDQ+YCP PPC+ Q  S 
Sbjct: 273 SIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQSFSK 332

Query: 330 VQISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINLI-SSDNGKLFSSCFYVSGF 389
           +QI +V+F+NIWG+S++  A  L+CSK+ PCKN+ L +IN++    +G   S C  V G+
Sbjct: 333 IQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVGGW 392

Query: 390 SYGHQNPTPCL 399
             G  +P  C+
Sbjct: 393 IGGKISPPSCI 403

[Close]

BLAST of MS002811 vs. TAIR 10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )

HSP 1 Score: 381.7 bits (979), Expect = 7.1e-106
Identity = 192/387 (49.61%), Postives = 255/387 (65.89%), Query Frame = 0


Query: 16  FFLFSIIEAHGGKAKFFNVVNYGAIPDGKTDNSKAFLEAWRDACGWK-GRGRVYIPKGTF 75
           FFL +  + + G+ K F+V NYGA  D + DN+ AF +AW +AC W  GR  VYIP G F
Sbjct: 16  FFLAASTKEYPGQPKIFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIF 75

Query: 76  KLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAI 135
            LR+V F GPC+    F I+G L AP +  +++ + WI F+YVD LTV GGG LDGQG+ 
Sbjct: 76  YLRQVTFSGPCKSSITFFIRGTLLAPRNPYAINQEEWILFKYVDNLTVTGGGLLDGQGSY 135

Query: 136 AWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISA 195
           +WP N+C K   C +L   + F FV + K++ LRSINSK  HF LF     NIT + I+A
Sbjct: 136 SWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITA 195

Query: 196 PGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLG 255
           PGDSPNTDGIKIG S  + I N  IGTGDDCI++L G+ N+ +S+V CGPGHGIS+GSLG
Sbjct: 196 PGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLG 255

Query: 256 KYENEEDVMGITVKNCTFRNTTDGVRIKTWASS-STADAYNIHYEDIFMDNVRNPIIIDQ 315
           +Y+ E++V G+TV+N     TTDG+RIKTWA S S     N  YE+I M NV NPI+IDQ
Sbjct: 256 RYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQ 315

Query: 316 QYCPIPPCNQ--QVSSGVQISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINL-I 375
           QYCP   C+   + +S VQI +V++ NIWG+S+S  A  ++CSK+ PC+++ L +INL  
Sbjct: 316 QYCPHGQCDSPGKYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHY 375

Query: 376 SSDNGKLFSSCFYVSGFSYGHQNPTPC 398
              +G + + C  V G   G   P  C
Sbjct: 376 VGRDGLVTALCENVGGSIRGKIVPANC 402

[Close]

BLAST of MS002811 vs. TAIR 10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 378.6 bits (971), Expect = 6.0e-105
Identity = 188/402 (46.77%), Postives = 256/402 (63.68%), Query Frame = 0


Query: 3   VKKCGVFRVFLVGFFLFSIIEAHGGKAKFFNVVNYGAIPDGKTDNSKAFLEAWRDAC-GW 62
           V     F+   + F   ++      + K FNV  YG+ PDGKTDN+ AF   W+ AC   
Sbjct: 2   VSIASTFKALCLSFLFIAVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKRACTRI 61

Query: 63  KGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYVDRLT 122
            G  ++Y+PKGTF L  V F+GPC+    FVI G L AP +   +  D+WINFRY++ L+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKQDTWINFRYINNLS 121

Query: 123 VCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFG 182
           + G G+LDGQG  +WP N+C K   C  L  TM F FV N ++ ++ S+NSK  HF  F 
Sbjct: 122 ISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFS 181

Query: 183 CSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVV 242
             + NIT + I+APGDSPNTDGIK+G+  +I+I+N+ IGTGDDCI++LSG+ N+ +SN+ 
Sbjct: 182 VHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNIK 241

Query: 243 CGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASS-STADAYNIHYEDI 302
           CGPGHGIS+GSLGK ++E+DV  +TV++  F  T+DG+RIKTW SS S     N  YE+I
Sbjct: 242 CGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKIVVSNFIYENI 301

Query: 303 FMDNVRNPIIIDQQYCPIPPCNQQV--SSGVQISNVRFKNIWGSSSSVTAETLRCSKSRP 362
            M +V  PI IDQ+YCP PPC  +    S VQI +++ KNI+G+S+++ A  L+CSKS P
Sbjct: 302 QMIDVGKPINIDQKYCPHPPCEHEKKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFP 361

Query: 363 CKNIVLEDINL--ISSDNGKLFSSCFYVSGFSYGHQNPTPCL 399
           CKN+ L DINL     + G   + C  V G       P  CL
Sbjct: 362 CKNVELIDINLKHTGLEKGHSTAMCENVDGSVRSKMVPQHCL 403

[Close]

BLAST of MS002811 vs. TAIR 10
Match: AT1G43090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-104
Identity = 186/390 (47.69%), Postives = 252/390 (64.62%), Query Frame = 0


Query: 3   VKKCGVFRVFLVGFFLFSIIEAHGGKAKFFNVVNYGAIPDGKTDNSKAFLEAWRDAC-GW 62
           V     F+   + F    +      + K FNV  YG+ PDGKTDN+ AF   W+ AC   
Sbjct: 2   VSIASTFKALCLSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRI 61

Query: 63  KGRGRVYIPKGTFKLRKVLFLGPCEGQTAFVIKGILKAPTDMSSLSADSWINFRYVDRLT 122
            G  ++Y+PKGTF L  V F+GPC+    FVI G L AP +   +  D+WINFRY++ L+
Sbjct: 62  SGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKQDTWINFRYINNLS 121

Query: 123 VCGGGSLDGQGAIAWPRNECKKTPTCLSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFG 182
           + G G+LDGQG  +WP N+C K   C  L  TM F FV N ++ ++ S+NSK  HF  F 
Sbjct: 122 ISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFS 181

Query: 183 CSKINITNIHISAPGDSPNTDGIKIGNSDSINITNSIIGTGDDCISMLSGSKNIQVSNVV 242
             + NIT + I+APGDSPNTDGIK+G+  +I+I+N+ IGTGDDCI++LSG+ N+ +SNV 
Sbjct: 182 VHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVK 241

Query: 243 CGPGHGISIGSLGKYENEEDVMGITVKNCTFRNTTDGVRIKTWASS-STADAYNIHYEDI 302
           CGPGHGIS+GSLGK ++E+DV  +TV++  F  T+DG+RIKTW SS S     N  YE+I
Sbjct: 242 CGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENI 301

Query: 303 FMDNVRNPIIIDQQYCPIPPCNQQV--SSGVQISNVRFKNIWGSSSSVTAETLRCSKSRP 362
            M +V  PI IDQ+YCP PPC  +    S VQI +++ KNI+G+S+++ A  L+CSKS P
Sbjct: 302 QMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFP 361

Query: 363 CKNIVLEDINL--ISSDNGKLFSSCFYVSG 387
           CKN+ L DINL     + G   + C  V G
Sbjct: 362 CKNVELIDINLKHTGLEKGHSTAMCENVDG 391

[Close]

BLAST of MS002811 vs. TAIR 10
Match: AT1G17150.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.9e-103
Identity = 185/373 (49.60%), Postives = 243/373 (65.15%), Query Frame = 0


Query: 28  KAKFFNVVNYGAIPDGKTDNSKAFLEAWRDACGWKGRGRVYIPKGTFKLRKVLFLGPCEG 87
           + K F+V +YGA  DGK DN+ AF  AW+DAC W G  ++YIP GTF L  V F+GPC+G
Sbjct: 29  RPKVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDG 88

Query: 88  QTAFVIKGILKAPTDMSSLSADSWINFRYVDRLTVCGGGSLDGQGAIAWPRNECKKTPTC 147
           + +FVI G L AP +   +  + WINFRY++ LTV G G+LDGQG  +W   +C+K   C
Sbjct: 89  KISFVIDGTLLAPPNNDDIKKEIWINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNC 148

Query: 148 LSLPTTMKFDFVTNGKVHNLRSINSKNNHFMLFGCSKINITNIHISAPGDSPNTDGIKIG 207
             L   M FDFV N  ++ + S+NSK  HF        +IT ++I AP +SPNTDGIKI 
Sbjct: 149 PKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIA 208

Query: 208 NSDSINITNSIIGTGDDCISMLSGSKNIQVSNVVCGPGHGISIGSLGKYENEEDVMGITV 267
            S ++ I+N+ I TGDDCI+MLSG+ N  + NV CGPGHGISIGSLGK ++E++V G+ V
Sbjct: 209 LSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMV 268

Query: 268 KNCTFRNTTDGVRIKTWASS-STADAYNIHYEDIFMDNVRNPIIIDQQYCPIPPCNQQVS 327
           +N  F  TT+G+RIKTW SS ST    N+ YE++ M NV NPI IDQ+YCP PPC+    
Sbjct: 269 RNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGD 328

Query: 328 SGVQISNVRFKNIWGSSSSVTAETLRCSKSRPCKNIVLEDINLISSD-NGKLFSSCFYVS 387
           S +QI NV  KNIWG+S +  A   +CSK+ PCK++ L DINL     +G   + C  V 
Sbjct: 329 SHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVD 388

Query: 388 GFSYGHQNPTPCL 399
           G + G   P  CL
Sbjct: 389 GSATGKMVPPHCL 401

The following BLAST results are available for this feature:

BLAST of MS002811 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063000.1	5.0e-186	78.96	exopolygalacturonase [Cucumis melo var. makuwa]	[more]
XP_016901151.1	6.5e-186	78.71	PREDICTED: exopolygalacturonase [Cucumis melo] >TYK16348.1 exopolygalacturonase ...	[more]
XP_011654343.2	4.0e-183	78.16	exopolygalacturonase [Cucumis sativus]	[more]
KAE8649244.1	4.0e-183	78.16	hypothetical protein Csa_014726 [Cucumis sativus]	[more]
XP_022942235.1	2.7e-179	75.87	exopolygalacturonase-like [Cucurbita moschata] >KAG7031123.1 Exopolygalacturonas...	[more]

BLAST of MS002811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39766	4.4e-92	45.33	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	7.4e-92	44.36	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q6H9K0	3.7e-91	44.66	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P35339	2.7e-86	41.46	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P26216	6.1e-86	42.51	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]

BLAST of MS002811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6Y6	2.4e-186	78.96	Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468...	[more]
A0A5D3CYK2	3.2e-186	78.71	Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G...	[more]
A0A1S4DYT5	3.2e-186	78.71	exopolygalacturonase OS=Cucumis melo OX=3656 GN=LOC103493242 PE=3 SV=1	[more]
A0A6J1J1C3	1.3e-179	76.12	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111480430 PE=3 SV=1	[more]
A0A6J1FVW3	1.3e-179	75.87	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111447346 PE=3 SV=...	[more]

BLAST of MS002811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78400.1	6.4e-107	50.40	Pectin lyase-like superfamily protein	[more]
AT2G33160.1	7.1e-106	49.61	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro...	[more]
AT1G43080.1	6.0e-105	46.77	Pectin lyase-like superfamily protein	[more]
AT1G43090.1	5.1e-104	47.69	Pectin lyase-like superfamily protein	[more]
AT1G17150.1	1.9e-103	49.60	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 359..386 e-value: 1200.0 score: 6.6 coord: 209..230 e-value: 2000.0 score: 5.1 coord: 326..350 e-value: 1600.0 score: 5.8 coord: 232..252 e-value: 900.0 score: 7.5 coord: 182..208 e-value: 39.0 score: 13.1 coord: 262..283 e-value: 0.066 score: 22.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 59..383 e-value: 2.0E-95 score: 319.6
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 239..252
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 22..396 e-value: 1.2E-111 score: 375.6
None	No IPR available	PANTHER	PTHR31375:SF124	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 31..384
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 31..384
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 26..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002811.1	MS002811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity