MS002779 (gene) Bitter gourd (TR) v1

Overview


Name	MS002779
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ras-related protein RABA1b-like
Location	scaffold66: 521737 .. 523865 (-)
RNA-Seq Expression	MS002779
Synteny	MS002779

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGCTACAGAGCCGATGATGATTACGACTACTTGTTCAAGGTGGTTCTCATTGGGGACTCCGGCGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAATCTCGAGTCCAAATCCACCATTGGTGTTGAGTTCGCCACCAGGACCTTGAATGTCGATAGTAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAGAGGTTTTGTTTCTTTTTTCTGTTTCGTTTTCTCCTCTGGATTTCTCTTGTTTGCTTCCCTTGATTCGCATGAGTTGCTTTAAGTTTTCGATTCTGGTTGCTTGCTGTTTTTCTGAGATGGAACTGTTCTGATTTCTGGGGTTTAGCGTGTTCCGGTTTGAGAGAGGTATGTAATAACCTAGATCTGTTCGGTACCGACTGTGGTTTCTTCTTAATCTTGGGTTCTTCTGGTTTAATTGAGTGTTTTCGTGCTCGCGGAGTCGGTTTTGATGTCGTCTTACTCTGATGTGGAGGCTTGTTCTTCTTACTACGTAGTTGTATGAGTAATCAAATCACTCTGGTCGATGACGTAGGAAAATCTTAGATTCAGAAAGCATTTCTTTGTGAAGAATTCATTTAGTAGATGTTAATGAAGTAGTTGGGAACTTGGAATTATCCGAGCGGACACCGGAGATATTATTGTTGAGGAAGACTTGCGGATTCTGTTCCTTGGATCGTGTGCTTTGAGCCATCTCTTTTTCAAATCTTTTACAATTTGTAGTAGCAACAGGAAGTTTGTTTGATTCTTCGCATTATTCTTTCCCCTCTGCCCCGAGAAAAGTATAAAGTTATTCGGCTTCCTTCTACAGGAATTCATTTCCTGTATTCCGGGGGGGAATTAATTAAAATTTTCTTTCATGCGTTGTATTTGTACCTCCTCAGATTTCTGATTTCTGTTTAACAATGCCTAAGGAGGCAAAAATAAAACAAAGATGTCAATGAAATTTCTGTTATGACCTGGGTCGGCAGGGACATTGAACACGGTCAGAGATATTGATTCCCTATTTTTAGAGAGCTCGAATTGGTGCTGTCATTACTTAGAAGTAGTTTAGAATCTCCTACCAACCAGAGAAACTATGTCATTTCTGTACAATTTATAAAATGATAGAAACTGTGACACGGGCAGGAATCGTCGAGCGAGTGCGGAACGTTGTCATAGGTTCTCGGGCTTGTATTCTCGCTATTATGATTTTTTATTGCTTGTCAAATTAGCTATCTCTGAAAAAAACTGAACCTGCTATATGGAGTGGCATTTACTTGCCTATATGCTATTCATGTACTGGATTTCCCCGAAACACAGAAGAAAAAATGGCGCCACTCCATGATAATTATGAATCTGCACTCTTAACACCCCCTCCACAGAGTAAGCATCTGATAATAGAAATAGAATGATCTGCAGTACAAGATGTGCTTTTGGTTAACCATGATTTTACTTTTGTTTTCTCTATACATGTAATGATGCCTATGAATGTTGATTATGAAATTAAAATTCCTGTGGTGATGTGATCCTGTAGGAAACTGGGTTACGATTCTCTTATAAATTAGTTGGAAAGATCTCTTCATCAATACAAGTCTGCTAGACTGATTATATGATGTAGTTTACAATCTCCATCTCATGTTAAAATTAGCTGTTCAGATCTGCATGGCTTCTGTGTCTATAGGTACCGTGCCATCACCAGTGCCTACTATCGTGGAGCTGTCGGTGCACTCCTTGTATACGACGTCACTCGTCATGCAACATTTGAGAATGTGGACCGGTGGCTAAAAGAACTTAAGAACCACACAGATTCCAACATCGTAGTAATGCTTGTTGGCAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGCAAGTCCTACGCCGAGAGGGAATCACTCTACTTCATAGAAACTTCTGCACTAGAAGCAGTCAACGTCGAGAAAGCCTTCGCCGAGGTCCTCACTCAGATCTACCACATCGTAAGCAAGAAGGCCGTTGAGGGCGGAGAAAATGGATCTGCCTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTCTAAACAGAATCAAATGTTGCTCGAGC

mRNA sequence

ATGGCTGGCTACAGAGCCGATGATGATTACGACTACTTGTTCAAGGTGGTTCTCATTGGGGACTCCGGCGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAATCTCGAGTCCAAATCCACCATTGGTGTTGAGTTCGCCACCAGGACCTTGAATGTCGATAGTAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAGAGGTTTTGTTTCTTTTTTCTTTTACAATCTCCATCTCATGTTAAAATTAGCTGTTCAGATCTGCATGGCTTCTGTGTCTATAGGTACCGTGCCATCACCAGTGCCTACTATCGTGGAGCTGTCGGTGCACTCCTTGTATACGACGTCACTCGTCATGCAACATTTGAGAATGTGGACCGGTGGCTAAAAGAACTTAAGAACCACACAGATTCCAACATCGTAGTAATGCTTGTTGGCAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGCAAGTCCTACGCCGAGAGGGAATCACTCTACTTCATAGAAACTTCTGCACTAGAAGCAGTCAACGTCGAGAAAGCCTTCGCCGAGGTCCTCACTCAGATCTACCACATCGTAAGCAAGAAGGCCGTTGAGGGCGGAGAAAATGGATCTGCCTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTCTAAACAGAATCAAATGTTGCTCGAGC

Coding sequence (CDS)

ATGGCTGGCTACAGAGCCGATGATGATTACGACTACTTGTTCAAGGTGGTTCTCATTGGGGACTCCGGCGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAATCTCGAGTCCAAATCCACCATTGGTGTTGAGTTCGCCACCAGGACCTTGAATGTCGATAGTAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAGAGGTTTTGTTTCTTTTTTCTTTTACAATCTCCATCTCATGTTAAAATTAGCTGTTCAGATCTGCATGGCTTCTGTGTCTATAGGTACCGTGCCATCACCAGTGCCTACTATCGTGGAGCTGTCGGTGCACTCCTTGTATACGACGTCACTCGTCATGCAACATTTGAGAATGTGGACCGGTGGCTAAAAGAACTTAAGAACCACACAGATTCCAACATCGTAGTAATGCTTGTTGGCAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGCAAGTCCTACGCCGAGAGGGAATCACTCTACTTCATAGAAACTTCTGCACTAGAAGCAGTCAACGTCGAGAAAGCCTTCGCCGAGGTCCTCACTCAGATCTACCACATCGTAAGCAAGAAGGCCGTTGAGGGCGGAGAAAATGGATCTGCCTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTCTAAACAGAATCAAATGTTGCTCGAGC

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS

Homology

[Close]

BLAST of MS002779 vs. NCBI nr
Match: XP_022142868.1 (ras-related protein Rab11D-like [Momordica charantia])

HSP 1 Score: 412.1 bits (1058), Expect = 3.2e-111
Identity = 217/244 (88.93%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. NCBI nr
Match: XP_022982677.1 (ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related protein RABA1b-like [Cucurbita pepo subsp. pepo] >XP_038877813.1 ras-related protein RABA1b-like [Benincasa hispida] >KAG6600502.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031142.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 410.6 bits (1054), Expect = 9.4e-111
Identity = 216/244 (88.52%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. NCBI nr
Match: XP_023552145.1 (ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo] >KAG6577033.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015054.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.8 bits (1052), Expect = 1.6e-110
Identity = 215/244 (88.11%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA+SVPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSATSVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. NCBI nr
Match: XP_004137233.1 (ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Csa_015307 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 2.1e-110
Identity = 215/244 (88.11%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAS+VPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. NCBI nr
Match: XP_022942927.1 (ras-related protein RABA1b-like [Cucurbita moschata])

HSP 1 Score: 409.5 bits (1051), Expect = 2.1e-110
Identity = 215/244 (88.11%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI+DESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.9e-94
Identity = 178/245 (72.65%), Postives = 200/245 (81.63%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD+K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           V+KAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VVKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTR ATFEN  RWLKEL++HTD NIVVML+GNKSDLRHLVAVPTEDGKS+AERESLYF+
Sbjct: 121 DVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESG-LNRI 240
           ETSALEA NVE AF EVLTQIY IVSK+AVE G++GS+S +P++G+ IN+K++S  L R 
Sbjct: 181 ETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRF 218

Query: 241 KCCSS 245
            CCS+
Sbjct: 241 GCCST 218

[Close]

BLAST of MS002779 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.2e-93
Identity = 186/245 (75.92%), Postives = 198/245 (80.82%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           V+KAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VVKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTR ATFENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+
Sbjct: 121 DVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIK-DESGLNRI 240
           ETSALEA NVE AFAEVLTQIY I SKK VE GE+G+A SVP +GEKI +K D S L ++
Sbjct: 181 ETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKL 216

Query: 241 KCCSS 245
            CCS+
Sbjct: 241 GCCSN 216

[Close]

BLAST of MS002779 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.3e-91
Identity = 176/245 (71.84%), Postives = 193/245 (78.78%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D+K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRH T+ENV RWLKEL++HTD NIVVML+GNKSDLRHLVAV T++ K  AERE LYF+
Sbjct: 121 DVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDE-SGLNRI 240
           ETSALEA NVE AF E LTQIY IVSKKAVE G+ G+ SS P +GE INIKDE S   + 
Sbjct: 181 ETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKKF 218

Query: 241 KCCSS 245
            CCSS
Sbjct: 241 GCCSS 218

[Close]

BLAST of MS002779 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-90
Identity = 175/244 (71.72%), Postives = 200/244 (81.97%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRH+TFENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESLYF+
Sbjct: 121 DVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALE+ NVE AF+EVLTQIYH+VSKKA+E GE+  + +VP++GEKI++ D S + +  
Sbjct: 181 ETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV-DVSAVKKTG 214

Query: 241 CCSS 245
           CCS+
Sbjct: 241 CCSN 214

[Close]

BLAST of MS002779 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.5e-90
Identity = 178/245 (72.65%), Postives = 199/245 (81.22%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRH+TFENV+ WLKEL+NHTD NIVVMLVGNKSDLRHLVAV TED KS+AE+ESLYF+
Sbjct: 121 DVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI-KDESGLNRI 240
           ETSALEA NVE AFAEVLTQI+HIVSKKA+E      +++VP++G+KI+I KD S + + 
Sbjct: 181 ETSALEATNVENAFAEVLTQIHHIVSKKAMEAA--SESANVPSKGDKIDIGKDVSAVKKG 216

Query: 241 KCCSS 245
            CCS+
Sbjct: 241 GCCSN 216

[Close]

BLAST of MS002779 vs. ExPASy TrEMBL
Match: A0A6J1CPC3 (ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111
Identity = 217/244 (88.93%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. ExPASy TrEMBL
Match: A0A6J1IX83 (ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.6e-111
Identity = 216/244 (88.52%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. ExPASy TrEMBL
Match: A0A0A0KXK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110
Identity = 215/244 (88.11%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAS+VPAQGEKINIKDESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. ExPASy TrEMBL
Match: A0A6J1FRL8 (ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110
Identity = 215/244 (88.11%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI+DESGLNRIK
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLNRIK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. ExPASy TrEMBL
Match: A0A1S3BSA1 (ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.3e-110
Identity = 214/244 (87.70%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI
Sbjct: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAS+VPAQGEKINIKDESGLNR+K
Sbjct: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLNRMK 217

Query: 241 CCSS 245
           CCSS
Sbjct: 241 CCSS 217

[Close]

BLAST of MS002779 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 342.8 bits (878), Expect = 2.2e-94
Identity = 186/245 (75.92%), Postives = 198/245 (80.82%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           V+KAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VVKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTR ATFENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+
Sbjct: 121 DVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIK-DESGLNRI 240
           ETSALEA NVE AFAEVLTQIY I SKK VE GE+G+A SVP +GEKI +K D S L ++
Sbjct: 181 ETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKL 216

Query: 241 KCCSS 245
            CCS+
Sbjct: 241 GCCSN 216

[Close]

BLAST of MS002779 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 334.3 bits (856), Expect = 8.0e-92
Identity = 175/244 (71.72%), Postives = 200/244 (81.97%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRH+TFENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESLYF+
Sbjct: 121 DVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIK 240
           ETSALE+ NVE AF+EVLTQIYH+VSKKA+E GE+  + +VP++GEKI++ D S + +  
Sbjct: 181 ETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV-DVSAVKKTG 214

Query: 241 CCSS 245
           CCS+
Sbjct: 241 CCSN 214

[Close]

BLAST of MS002779 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 334.0 bits (855), Expect = 1.0e-91
Identity = 178/245 (72.65%), Postives = 199/245 (81.22%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           VIKAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  VIKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRH+TFENV+ WLKEL+NHTD NIVVMLVGNKSDLRHLVAV TED KS+AE+ESLYF+
Sbjct: 121 DVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI-KDESGLNRI 240
           ETSALEA NVE AFAEVLTQI+HIVSKKA+E      +++VP++G+KI+I KD S + + 
Sbjct: 181 ETSALEATNVENAFAEVLTQIHHIVSKKAMEAA--SESANVPSKGDKIDIGKDVSAVKKG 216

Query: 241 KCCSS 245
            CCS+
Sbjct: 241 GCCSN 216

[Close]

BLAST of MS002779 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 320.1 bits (819), Expect = 1.6e-87
Identity = 167/245 (68.16%), Postives = 193/245 (78.78%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+ K
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           V+KAQIWDTAGQE                           RYRAITSAYYRGAVGALL+Y
Sbjct: 61  VVKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLIY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRHATFEN  RWL+EL+ HTD NIVVML+GNK DLRHLVAV TE+ K++AERESLYF+
Sbjct: 121 DVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIK-DESGLNRI 240
           ETSAL+A NVE AF EVLTQI+ IVSK++V+GG  G ++ +P +GE IN+K D S L R+
Sbjct: 181 ETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVLKRM 216

Query: 241 KCCSS 245
            CCS+
Sbjct: 241 GCCSN 216

[Close]

BLAST of MS002779 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-82
Identity = 157/247 (63.56%), Postives = 193/247 (78.14%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MA YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERFCFFFLLQSPSHVKISCSDLHGFCVYRYRAITSAYYRGAVGALLVY 120
           ++KAQIWDTAGQE                           RYRAITSAYYRGAVGALLVY
Sbjct: 61  IVKAQIWDTAGQE---------------------------RYRAITSAYYRGAVGALLVY 120

Query: 121 DVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFI 180
           DVTRH TFENV+RWLKEL++HTD+NIV+M VGNK+DLRHL AV TED K++AERE+ +F+
Sbjct: 121 DVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENTFFM 180

Query: 181 ETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI---KDESGLN 240
           ETSALE++NVE AF EVL+QIY +VS+KA++ G++ +A     +G+ IN+    D S + 
Sbjct: 181 ETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAAL---PKGQTINVGSKDDVSAVK 217

Query: 241 RIKCCSS 245
           ++ CCS+
Sbjct: 241 KVGCCSN 217

The following BLAST results are available for this feature:

BLAST of MS002779 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142868.1	3.2e-111	88.93	ras-related protein Rab11D-like [Momordica charantia]	[more]
XP_022982677.1	9.4e-111	88.52	ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related p...	[more]
XP_023552145.1	1.6e-110	88.11	ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo] >KAG6577033.1 Ras-r...	[more]
XP_004137233.1	2.1e-110	88.11	ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Cs...	[more]
XP_022942927.1	2.1e-110	88.11	ras-related protein RABA1b-like [Cucurbita moschata]	[more]

BLAST of MS002779 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	4.9e-94	72.65	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q39222	3.2e-93	75.92	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]
Q01111	2.3e-91	71.84	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q9SN35	1.1e-90	71.72	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
Q9FK68	1.5e-90	72.65	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]

BLAST of MS002779 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPC3	1.6e-111	88.93	ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 P...	[more]
A0A6J1IX83	4.6e-111	88.52	ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4...	[more]
A0A0A0KXK6	1.0e-110	88.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1	[more]
A0A6J1FRL8	1.0e-110	88.11	ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE...	[more]
A0A1S3BSA1	2.3e-110	87.70	ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=...	[more]

BLAST of MS002779 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16920.1	2.2e-94	75.92	RAB GTPase homolog A1B	[more]
AT4G18800.1	8.0e-92	71.72	RAB GTPase homolog A1D	[more]
AT5G45750.1	1.0e-91	72.65	RAB GTPase homolog A1C	[more]
AT1G06400.1	1.6e-87	68.16	Ras-related small GTP-binding family protein	[more]
AT5G60860.1	1.2e-82	63.56	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 37..53 score: 36.7 coord: 14..35 score: 55.22 coord: 55..77 score: 49.37 coord: 179..201 score: 41.61
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..239 e-value: 0.0022 score: -0.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..204 e-value: 3.1E-95 score: 332.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..204 e-value: 1.3E-13 score: 61.2
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..75
None	No IPR available	PANTHER	PTHR24073:SF1156	RAS-RELATED PROTEIN RABA1B	coord: 1..75 coord: 100..244
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 100..244
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..242 score: 34.100243
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..202 score: 9.168715
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..202 e-value: 6.6576E-122 score: 341.847
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..200 e-value: 6.9E-9 score: -4.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 101..202 e-value: 6.9E-31 score: 107.0 coord: 15..75 e-value: 1.4E-23 score: 83.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..244 score: 14.450087
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..242 e-value: 2.6E-67 score: 228.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..207
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..75 e-value: 5.7E-18 score: 63.2 coord: 88..197 e-value: 2.7E-15 score: 54.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002779.1	MS002779.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding