MS002768 (gene) Bitter gourd (TR) v1

Overview


Name	MS002768
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like
Location	scaffold66: 399098 .. 401563 (-)
RNA-Seq Expression	MS002768
Synteny	MS002768

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTCACCTCTTCCACCGCTCTCTCCCTAAAACCCTAATTCTGGCTTCCATGTTCTCCCGTTCCTTTCTCACCGCCACCGGAGCCGCCGTCTCCGCCTCTTCTCACTCCTCTTTCTCCCTTCTTCGCCGCCTCCGTCCCCTCGCTGCTATTGTTGCCGCTGATTTCCGGAGGCTCTCTCCGGCGCCGAGCGCGAGGGAGTTCTCCACCCGTGCCACGTCTTCGTCCCTCAACGATCCCAATCCTAACTGGTCTAATCGCCCACCCAAGGAGACCATTTTGCTTGATGGGTGTGATTTTGAGCACTGGCTTGTTGTCATGGAGAAGCCAGAGGGTGAACCCACGAGGGATGAGATTATCGACAGCTATATCAAAACTCTTTCCATGGTTGTCGGAAGGTGAAATATCGTTATGGTCGATTGCGCTGAATCTCTCTTTTCAACCCTGATAATCGCATTTAATTGTGTTTCTTCTGGTGTTTTAGTGATTATGTGCGGATATTTAGAACATAATAGCGGATTATATGTGGGTTTGTGTCAGCATCGACTGTTTATATAAATAATTAATCTGAATTGAATTGTGGCTCACTGCAGATACTATTCTGTTTTGTTGGTGCCTTCACTTCATGATAATTTTACAGTATACTGGTGTCTATTTGAGAAATGGTATTTGTAGCTGTTCAGGTCTTTGATTTTTACTGCATTTTCCCTCTTTTGTATCTTATTGTTACAGTGAGGAAGAAGCTAGGATGAAGATATACTCTGTTTCAACTAGATGCTACTTTGCATTTGGGTGCCTTGTTTCTGAAGAACTCTCTTACAAGATCAAAGGTATACCTTTATCTCTTGTTTTCTTTCACTTCTTGTTTTGGTATTTATATCTTTTGTGTTGATTGTAATTTGTTATGCCCTTTTCTCCTCAGAGCTGCCTAAGGTCCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGTATATTTCCTTTTCTTATTTAGTTAGTTAATAAAGTATTTAACTTTTTTGTCAGTGTCTAATTGTACTGATCTTGTTTTTCATATCGTCAACCAATAATTATAAATAGAGGTCAATAGTTTTAATTCAATATCCCTCATCTGGAGGTGGAAGATATTTTTTAAGCTAAAATGTTAACGATAGCATGGTTCTATTTCCATTTAAACTGCTAGAAGTTAAATTAATACGCTTACACAGAAGATGGTCTTTGACTGTAATGCTAAGATAATATTAATATAACACCATATCATATGGATTTATAGTACATGTACCTTTGGCCCAGAAAAGAAGTTATAAAATAATATCCCATACAAAGTAGTAGCTTTTCTCTCAAGGAAAACAAAGAATCCTGAGGAGGTTAGAAGTTAAAGCTCTTGTATGAGGGTATAGGATCCTGTTTCATTCAGGTCTCATTCTTAAGATGTCAAGAAAACTAGAATGTATTAGGTTATATAATGCACTCCTGCTGGACCATCAGTAAATGGAGCATTTCAATGAAAGCTCTAATCTACAAGTTCCCTATCCTCACGCCAGACGAACAAAACTGAAAATGAAAAGCTTGTATCTTTTTGTCATCTCCCCTACCTTTTGGAGAACTTATCAAATTGTTTTGTTGGTTCCTCTTCTAAACTATATTGCCGTTGAGTAAGGAGTTGCACAGAACTATTATCTAATGTGCTGTGTATTTTTGGTTTCCTTTGGCAGGGGAGCCCTTTATAAATGGACAAGCTGTTCCATATGACCCGAAGTACCACGAGGAGTGGATTAGAAACAATGCTCGAGCTAATGAAAGGAATAGGCGCAATGATAGGCCTCGTAATTTTGACAGGTCAAGAAATTTTGAAAGGAGGAGGGAGAACATGCAAAATAGAGATTTTCCAAACGCTTCAGGGAATCAGCCTACTGGACCTAACATGGGTGGAGGACCTCCAAGTAATATGCCTCCCAACAACTTTGCACCACCACCACAGCCACAAAACCATGGTGGAATGCCCTCTAGCAACTATGCACCACCACCACCACCAAACAACTGGGGAGGACCACCGCCACCACCACCAAACAACTATAGGGGAGGACCACCACCCCCACCGAACAACTTCGAGGGAGCACCACCACCACGCAACTATGCAGGAGCACCACCTCCACCACTGAACAACTTCGAGGGAGCACCACCGCCACGCAACTATGCAGGAGCACCACCACCACCACCACCACCAAGCAACTCCGGACCAGCACCACCCCGCAACTATGGGGGGCCACAACCAAGCAACTATGGGGGGCCACAGCCAAACAACTATTGGGGAGGACCACCTCCTCCAAACAACTATGGTGGACCCTCAAACGGAGTTGGGTCGCCTCAACAAAACAGCCATGGAGGAGCGATGCAGTCTAATGCTCATGGATGGTCTAGTAATGTGCATAACAATCAACAAGAA

mRNA sequence

ATGGCGACTCACCTCTTCCACCGCTCTCTCCCTAAAACCCTAATTCTGGCTTCCATGTTCTCCCGTTCCTTTCTCACCGCCACCGGAGCCGCCGTCTCCGCCTCTTCTCACTCCTCTTTCTCCCTTCTTCGCCGCCTCCGTCCCCTCGCTGCTATTGTTGCCGCTGATTTCCGGAGGCTCTCTCCGGCGCCGAGCGCGAGGGAGTTCTCCACCCGTGCCACGTCTTCGTCCCTCAACGATCCCAATCCTAACTGGTCTAATCGCCCACCCAAGGAGACCATTTTGCTTGATGGGTGTGATTTTGAGCACTGGCTTGTTGTCATGGAGAAGCCAGAGGGTGAACCCACGAGGGATGAGATTATCGACAGCTATATCAAAACTCTTTCCATGGTTGTCGGAAGTGAGGAAGAAGCTAGGATGAAGATATACTCTGTTTCAACTAGATGCTACTTTGCATTTGGGTGCCTTGTTTCTGAAGAACTCTCTTACAAGATCAAAGAGCTGCCTAAGGTCCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGGGAGCCCTTTATAAATGGACAAGCTGTTCCATATGACCCGAAGTACCACGAGGAGTGGATTAGAAACAATGCTCGAGCTAATGAAAGGAATAGGCGCAATGATAGGCCTCGTAATTTTGACAGGTCAAGAAATTTTGAAAGGAGGAGGGAGAACATGCAAAATAGAGATTTTCCAAACGCTTCAGGGAATCAGCCTACTGGACCTAACATGGGTGGAGGACCTCCAAGTAATATGCCTCCCAACAACTTTGCACCACCACCACAGCCACAAAACCATGGTGGAATGCCCTCTAGCAACTATGCACCACCACCACCACCAAACAACTGGGGAGGACCACCGCCACCACCACCAAACAACTATAGGGGAGGACCACCACCCCCACCGAACAACTTCGAGGGAGCACCACCACCACGCAACTATGCAGGAGCACCACCTCCACCACTGAACAACTTCGAGGGAGCACCACCGCCACGCAACTATGCAGGAGCACCACCACCACCACCACCACCAAGCAACTCCGGACCAGCACCACCCCGCAACTATGGGGGGCCACAACCAAGCAACTATGGGGGGCCACAGCCAAACAACTATTGGGGAGGACCACCTCCTCCAAACAACTATGGTGGACCCTCAAACGGAGTTGGGTCGCCTCAACAAAACAGCCATGGAGGAGCGATGCAGTCTAATGCTCATGGATGGTCTAGTAATGTGCATAACAATCAACAAGAA

Coding sequence (CDS)

ATGGCGACTCACCTCTTCCACCGCTCTCTCCCTAAAACCCTAATTCTGGCTTCCATGTTCTCCCGTTCCTTTCTCACCGCCACCGGAGCCGCCGTCTCCGCCTCTTCTCACTCCTCTTTCTCCCTTCTTCGCCGCCTCCGTCCCCTCGCTGCTATTGTTGCCGCTGATTTCCGGAGGCTCTCTCCGGCGCCGAGCGCGAGGGAGTTCTCCACCCGTGCCACGTCTTCGTCCCTCAACGATCCCAATCCTAACTGGTCTAATCGCCCACCCAAGGAGACCATTTTGCTTGATGGGTGTGATTTTGAGCACTGGCTTGTTGTCATGGAGAAGCCAGAGGGTGAACCCACGAGGGATGAGATTATCGACAGCTATATCAAAACTCTTTCCATGGTTGTCGGAAGTGAGGAAGAAGCTAGGATGAAGATATACTCTGTTTCAACTAGATGCTACTTTGCATTTGGGTGCCTTGTTTCTGAAGAACTCTCTTACAAGATCAAAGAGCTGCCTAAGGTCCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGGGAGCCCTTTATAAATGGACAAGCTGTTCCATATGACCCGAAGTACCACGAGGAGTGGATTAGAAACAATGCTCGAGCTAATGAAAGGAATAGGCGCAATGATAGGCCTCGTAATTTTGACAGGTCAAGAAATTTTGAAAGGAGGAGGGAGAACATGCAAAATAGAGATTTTCCAAACGCTTCAGGGAATCAGCCTACTGGACCTAACATGGGTGGAGGACCTCCAAGTAATATGCCTCCCAACAACTTTGCACCACCACCACAGCCACAAAACCATGGTGGAATGCCCTCTAGCAACTATGCACCACCACCACCACCAAACAACTGGGGAGGACCACCGCCACCACCACCAAACAACTATAGGGGAGGACCACCACCCCCACCGAACAACTTCGAGGGAGCACCACCACCACGCAACTATGCAGGAGCACCACCTCCACCACTGAACAACTTCGAGGGAGCACCACCGCCACGCAACTATGCAGGAGCACCACCACCACCACCACCACCAAGCAACTCCGGACCAGCACCACCCCGCAACTATGGGGGGCCACAACCAAGCAACTATGGGGGGCCACAGCCAAACAACTATTGGGGAGGACCACCTCCTCCAAACAACTATGGTGGACCCTCAAACGGAGTTGGGTCGCCTCAACAAAACAGCCATGGAGGAGCGATGCAGTCTAATGCTCATGGATGGTCTAGTAATGTGCATAACAATCAACAAGAA

Protein sequence

MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRLSPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEIIDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPNNWGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPPPPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAHGWSSNVHNNQQE

Homology

[Close]

BLAST of MS002768 vs. NCBI nr
Match: XP_022142853.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Momordica charantia])

HSP 1 Score: 836.3 bits (2159), Expect = 1.2e-238
Identity = 429/432 (99.31%), Postives = 430/432 (99.54%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL
Sbjct: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI
Sbjct: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPNNWGG 300
           MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPP PQNHGGMPSSNYAPPPPPNNWGG
Sbjct: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPPPQNHGGMPSSNYAPPPPPNNWGG 300

Query: 301 PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPPPPS 360
           PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGA PPPPPPS
Sbjct: 301 PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGA-PPPPPPS 360

Query: 361 NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH 420
           NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH
Sbjct: 361 NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH 420

Query: 421 GWSSNVHNNQQE 433
           GW+SNVHNNQQE
Sbjct: 421 GWTSNVHNNQQE 431

[Close]

BLAST of MS002768 vs. NCBI nr
Match: XP_022922870.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 634.8 bits (1636), Expect = 5.4e-178
Identity = 349/435 (80.23%), Postives = 366/435 (84.14%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RSLPKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSLPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPAPS REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPAPSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMSPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPP 360
           + G PPPPP+NY GGPPP        PPP N+ G PPPPLNN+ G  PPRNYA  PPPPP
Sbjct: 301 FSG-PPPPPHNYAGGPPP--------PPPNNFGGPPPPPLNNYAG-QPPRNYAPPPPPPP 360

Query: 361 PPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQS 420
           PP +SGPAPP         NYGGPQPNNYWGG PPPNNYGGPS+  G P QN++GG  Q 
Sbjct: 361 PPPHSGPAPPH--------NYGGPQPNNYWGG-PPPNNYGGPSHSGGPPPQNNYGGGGQP 416

Query: 421 NAHGWSSNVHNNQQE 433
           N  GWSSNVHN Q E
Sbjct: 421 NVGGWSSNVHNKQHE 416

[Close]

BLAST of MS002768 vs. NCBI nr
Match: XP_022984463.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 634.0 bits (1634), Expect = 9.3e-178
Identity = 350/444 (78.83%), Postives = 366/444 (82.43%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RS PKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSFPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPA S REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPASSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGA---PPPRNYAGAPP 360
           + G PPPPPNN+  GPPPPPNNF G PPP N    PPPP +N+ G    PPP N+ G PP
Sbjct: 301 FSG-PPPPPNNF-SGPPPPPNNFSGPPPPPNNFSGPPPPPHNYAGGPPPPPPNNFGGPPP 360

Query: 361 PP------PPPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQ 420
           PP       PP N  P PP + G   P NYGGPQPNNYWGGPPP NNYGGPSN  G P Q
Sbjct: 361 PPLNNYAGQPPRNYAPPPPPHSGAAPPHNYGGPQPNNYWGGPPPTNNYGGPSNSGGPPPQ 420

Query: 421 NSHGGAMQSNAHGWSSNVHNNQQE 433
           NS+GG  Q NA GWSSNVHN Q E
Sbjct: 421 NSYGGGGQPNAGGWSSNVHNKQHE 442

[Close]

BLAST of MS002768 vs. NCBI nr
Match: XP_022984464.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 [Cucurbita maxima])

HSP 1 Score: 625.9 bits (1613), Expect = 2.5e-175
Identity = 346/435 (79.54%), Postives = 361/435 (82.99%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RS PKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSFPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPA S REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPASSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPP 360
           + G PPPPP+NY GGPPP        PPP N+ G PPPPLNN+ G  PPRNYA     PP
Sbjct: 301 FSG-PPPPPHNYAGGPPP--------PPPNNFGGPPPPPLNNYAG-QPPRNYA-----PP 360

Query: 361 PPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQS 420
           PP +SG APP         NYGGPQPNNYWGGPPP NNYGGPSN  G P QNS+GG  Q 
Sbjct: 361 PPPHSGAAPPH--------NYGGPQPNNYWGGPPPTNNYGGPSNSGGPPPQNSYGGGGQP 412

Query: 421 NAHGWSSNVHNNQQE 433
           NA GWSSNVHN Q E
Sbjct: 421 NAGGWSSNVHNKQHE 412

[Close]

BLAST of MS002768 vs. NCBI nr
Match: XP_023552822.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 625.9 bits (1613), Expect = 2.5e-175
Identity = 347/438 (79.22%), Postives = 363/438 (82.88%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RSLPKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSLPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPAPS REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPAPSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGA---PPPRNYAGAPPPPLNNFEGAPPPRNYAGAPP 360
           + GPPPPP N    GPPPPP+N+ G    PPP N+ G PPPPLNN+ G  PPRNYA  PP
Sbjct: 301 FSGPPPPPHN--FSGPPPPPHNYAGGPPPPPPNNFGGPPPPPLNNYAG-QPPRNYASPPP 360

Query: 361 PPPPPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGA 420
           PP            + G P P NYGGPQ NNYWGG PPPNNYGGPSN  G P QNS+GG 
Sbjct: 361 PP------------HSGAPPPHNYGGPQANNYWGG-PPPNNYGGPSNSGGPPPQNSYGGG 420

Query: 421 MQSNAHGWSSNVHNNQQE 433
            Q NA GWSSNVHN Q E
Sbjct: 421 GQPNAGGWSSNVHNKQHE 422

[Close]

BLAST of MS002768 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 3.1e-107
Identity = 249/418 (59.57%), Postives = 282/418 (67.46%), Query Frame = 0


Query: 1   MATHLFHRSL--PKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFR 60
           MATH   RS+       L+ +F+RSF ++   A S +S    SLL R RPL A  ++ FR
Sbjct: 1   MATHTISRSILCRPAKSLSFLFTRSFASSAPLAKSPAS----SLLSRSRPLVAAFSSVFR 60

Query: 61  RLSPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRD 120
                 S +  ST+ATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVV+E P+GEPTRD
Sbjct: 61  --GGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRD 120

Query: 121 EIIDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDSYIKTL+ +VGSE+EARMKIYSVSTRCY+AFG LVSE+LS+K+KEL  VRWVLPDS
Sbjct: 121 EIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRR 240
           YLDV+NKDYGGEPFI+G+AVPYDPKYHEEWIRNNARANERNRRNDRPRN DRSRNFERRR
Sbjct: 181 YLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRR 240

Query: 241 ENMQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPNNW 300
           E                  NM GGPP   PP     PP P + GG      APPPP  + 
Sbjct: 241 E------------------NMAGGPPPQRPP--MGGPPPPPHIGGS-----APPPP--HM 300

Query: 301 GGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPP--- 360
           GG  PPPP+  +   PPPPNN  G   P  Y     PP NN  G  PP+NY G PPP   
Sbjct: 301 GGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGA---PPQNNMGGPRPPQNYGGTPPPNYG 360

Query: 361 -PPPPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQ-QNSH 412
             PP +N G APP NYGG  P  YG   P  Y G PP  NNY    +G+  PQ QN++
Sbjct: 361 GAPPANNMGGAPPPNYGGGPPPQYGAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNNY 382

[Close]

BLAST of MS002768 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-46
Identity = 119/250 (47.60%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 10  LPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRLSPA-PSARE 69
           L KTL  ++ +S SF T        SS S F++     PL   V++    L P   S R 
Sbjct: 14  LNKTLSSSTSYSSSFPT-------LSSRSRFAM-----PLIEKVSSSRTSLGPCYISTRP 73

Query: 70  FSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEIIDSYIKTL 129
            ++ +  S LNDP+PNWSNRPPKETILLDGCD+EHWL+VME  + +PT +E+I+SY+KTL
Sbjct: 74  KTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTL 133

Query: 130 SMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYG 189
           + V+G EEEA+ KIYSV T  Y  FG L+SEELS K+K LP V WVLPDSYLDV NKDYG
Sbjct: 134 TSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYG 193

Query: 190 GEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQ-NRDFP 249
           G+ ++ G+ +P  P+Y         R  E+     RPR       ++RRRE MQ  R  P
Sbjct: 194 GDLYVEGKVIP-RPQY---------RFTEQRHTRPRPR-----PRYDRRRETMQVERREP 236

Query: 250 NASGNQPTGP 258
           +   + P  P
Sbjct: 254 SMGLHSPVNP 236

[Close]

BLAST of MS002768 vs. ExPASy Swiss-Prot
Match: Q9CAH0 (Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF7 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.5e-41
Identity = 84/167 (50.30%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 47  RPLAAIVAADFRRLSPAPSAREFSTRATSSSLNDPNPNWSN--RPPKETILLDGCDFEHW 106
           RPL    A  F RLSP      FS    S S+N    +WS   R P    L++GCD++HW
Sbjct: 7   RPLNLTAAVRF-RLSP---LSPFS--GNSGSINSETTSWSELIRVPS---LVEGCDYKHW 66

Query: 107 LVVMEKPEGEPTRDEIIDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYK 166
           LV+M+ P G PTR+ I+ S+++TL+M +GSEEEA+  IYSVST+ Y+AFGC + E L+YK
Sbjct: 67  LVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEPLTYK 126

Query: 167 IKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRN 212
           I+ LP V+WVLPDS++   +  YGGEPF++G+ VPYD KYH +W+R+
Sbjct: 127 IRSLPDVKWVLPDSFIVDGDNRYGGEPFVDGEVVPYDEKYHADWLRD 164

[Close]

BLAST of MS002768 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-35
Identity = 99/235 (42.13%), Postives = 133/235 (56.60%), Query Frame = 0


Query: 17  ASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRLSPAPSAREFSTRAT-- 76
           AS  ++ F + + A  S S   S  + RR  P        F  +   P+   F+T  T  
Sbjct: 10  ASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTI------FHAVGYIPALTRFTTIRTRM 69

Query: 77  -----SSSLNDPNPNWSNRPPKETI-LLDGCDFEHWLVVMEKPEGE-PTRDEIIDSYIKT 136
                S S      N+S+RPP E   L  GCD+EHWL+VMEKP GE   + ++ID Y++T
Sbjct: 70  DRSGGSYSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQT 129

Query: 137 LSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDY 196
           L+ +VGSEEEAR KIY+VS   YF FGC + EE S K++ LP V +VLPDSY+D + KDY
Sbjct: 130 LAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDY 189

Query: 197 GGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQ 243
           G E F+NG+ VP  P+     +          R +D+P+  DR RN  RRRENM+
Sbjct: 190 GAELFVNGEVVPRPPERQRRMVELT-----NQRGSDKPKYHDRIRNV-RRRENMR 232

[Close]

BLAST of MS002768 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-34
Identity = 91/185 (49.19%), Postives = 117/185 (63.24%), Query Frame = 0


Query: 65  SAREFSTR-------ATSSSLNDPNPNWSNRPPKETI-LLDGCDFEHWLVVMEKPEGE-P 124
           S R FS R       +T S LN    N+S+RPP E   L  GCD+EHWL+VM+KP GE  
Sbjct: 41  STRFFSIRCGANRSGSTYSPLNS-GSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGA 100

Query: 125 TRDEIIDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVL 184
           T+ ++ID YI+TL+ VVGSEEEA+ +IY+VS   Y  FGC + EE S K++ LP V +VL
Sbjct: 101 TKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVL 160

Query: 185 PDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFE 241
           PDSY+D +NKDYG E F+NG+ V   P+      R      +  R  DRPR  DR+R + 
Sbjct: 161 PDSYVDPENKDYGAELFVNGEIVQRSPE------RQRRVEPQPQRAQDRPRYNDRTR-YS 217

[Close]

BLAST of MS002768 vs. ExPASy TrEMBL
Match: A0A6J1CPB1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111012864 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.0e-239
Identity = 429/432 (99.31%), Postives = 430/432 (99.54%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL
Sbjct: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI
Sbjct: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPNNWGG 300
           MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPP PQNHGGMPSSNYAPPPPPNNWGG
Sbjct: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPPPQNHGGMPSSNYAPPPPPNNWGG 300

Query: 301 PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPPPPS 360
           PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGA PPPPPPS
Sbjct: 301 PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGA-PPPPPPS 360

Query: 361 NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH 420
           NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH
Sbjct: 361 NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH 420

Query: 421 GWSSNVHNNQQE 433
           GW+SNVHNNQQE
Sbjct: 421 GWTSNVHNNQQE 431

[Close]

BLAST of MS002768 vs. ExPASy TrEMBL
Match: A0A6J1EA12 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430715 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.6e-178
Identity = 349/435 (80.23%), Postives = 366/435 (84.14%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RSLPKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSLPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPAPS REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPAPSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMSPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPP 360
           + G PPPPP+NY GGPPP        PPP N+ G PPPPLNN+ G  PPRNYA  PPPPP
Sbjct: 301 FSG-PPPPPHNYAGGPPP--------PPPNNFGGPPPPPLNNYAG-QPPRNYAPPPPPPP 360

Query: 361 PPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQS 420
           PP +SGPAPP         NYGGPQPNNYWGG PPPNNYGGPS+  G P QN++GG  Q 
Sbjct: 361 PPPHSGPAPPH--------NYGGPQPNNYWGG-PPPNNYGGPSHSGGPPPQNNYGGGGQP 416

Query: 421 NAHGWSSNVHNNQQE 433
           N  GWSSNVHN Q E
Sbjct: 421 NVGGWSSNVHNKQHE 416

[Close]

BLAST of MS002768 vs. ExPASy TrEMBL
Match: A0A6J1JAJ8 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482761 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 4.5e-178
Identity = 350/444 (78.83%), Postives = 366/444 (82.43%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RS PKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSFPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPA S REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPASSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGA---PPPRNYAGAPP 360
           + G PPPPPNN+  GPPPPPNNF G PPP N    PPPP +N+ G    PPP N+ G PP
Sbjct: 301 FSG-PPPPPNNF-SGPPPPPNNFSGPPPPPNNFSGPPPPPHNYAGGPPPPPPNNFGGPPP 360

Query: 361 PP------PPPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQ 420
           PP       PP N  P PP + G   P NYGGPQPNNYWGGPPP NNYGGPSN  G P Q
Sbjct: 361 PPLNNYAGQPPRNYAPPPPPHSGAAPPHNYGGPQPNNYWGGPPPTNNYGGPSNSGGPPPQ 420

Query: 421 NSHGGAMQSNAHGWSSNVHNNQQE 433
           NS+GG  Q NA GWSSNVHN Q E
Sbjct: 421 NSYGGGGQPNAGGWSSNVHNKQHE 442

[Close]

BLAST of MS002768 vs. ExPASy TrEMBL
Match: A0A6J1JAK6 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482761 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.2e-175
Identity = 346/435 (79.54%), Postives = 361/435 (82.99%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RS PKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSFPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPA S REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPASSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYA---PPPPPNN 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA   PPPPPNN
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPPNN 300

Query: 301 WGGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPP 360
           + G PPPPP+NY GGPPP        PPP N+ G PPPPLNN+ G  PPRNYA     PP
Sbjct: 301 FSG-PPPPPHNYAGGPPP--------PPPNNFGGPPPPPLNNYAG-QPPRNYA-----PP 360

Query: 361 PPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQS 420
           PP +SG APP         NYGGPQPNNYWGGPPP NNYGGPSN  G P QNS+GG  Q 
Sbjct: 361 PPPHSGAAPPH--------NYGGPQPNNYWGGPPPTNNYGGPSNSGGPPPQNSYGGGGQP 412

Query: 421 NAHGWSSNVHNNQQE 433
           NA GWSSNVHN Q E
Sbjct: 421 NAGGWSSNVHNKQHE 412

[Close]

BLAST of MS002768 vs. ExPASy TrEMBL
Match: A0A6J1E5B5 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430715 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 6.1e-175
Identity = 344/432 (79.63%), Postives = 359/432 (83.10%), Query Frame = 0


Query: 1   MATHLFHRSLPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRL 60
           MAT LF RSLPKTLIL SMFSRSFLTA  AA+SASS SS SLLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSLPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEI 120
           SPAPS REF+TRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEG+PTRDEI
Sbjct: 61  SPAPSVREFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEI 120

Query: 121 IDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180
           IDSYIKTL+MV+GSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL
Sbjct: 121 IDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYL 180

Query: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRREN 240
           DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERN+RNDRPRNFDRSRNFERRREN
Sbjct: 181 DVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRREN 240

Query: 241 MQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPNNWGG 300
           MQ+R+FPNAS NQPTGPNM    PSNMPPNNF     PQN GGMP  NYA        GG
Sbjct: 241 MQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMSPQNRGGMPQGNYA--------GG 300

Query: 301 PPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPPPPPPS 360
           PPPPPPNN+  GPPPPPNNF          G PPPPLNN+ G  PPRNYA  PPPPPPP 
Sbjct: 301 PPPPPPNNF-SGPPPPPNNF---------GGPPPPPLNNYAG-QPPRNYAPPPPPPPPPP 360

Query: 361 NSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQQNSHGGAMQSNAH 420
           +SGPAPP         NYGGPQPNNYWGG PPPNNYGGPS+  G P QN++GG  Q N  
Sbjct: 361 HSGPAPPH--------NYGGPQPNNYWGG-PPPNNYGGPSHSGGPPPQNNYGGGGQPNVG 404

Query: 421 GWSSNVHNNQQE 433
           GWSSNVHN Q E
Sbjct: 421 GWSSNVHNKQHE 404

[Close]

BLAST of MS002768 vs. TAIR 10
Match: AT3G15000.1 (cobalt ion binding )

HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-108
Identity = 249/418 (59.57%), Postives = 282/418 (67.46%), Query Frame = 0


Query: 1   MATHLFHRSL--PKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFR 60
           MATH   RS+       L+ +F+RSF ++   A S +S    SLL R RPL A  ++ FR
Sbjct: 1   MATHTISRSILCRPAKSLSFLFTRSFASSAPLAKSPAS----SLLSRSRPLVAAFSSVFR 60

Query: 61  RLSPAPSAREFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRD 120
                 S +  ST+ATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVV+E P+GEPTRD
Sbjct: 61  --GGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRD 120

Query: 121 EIIDSYIKTLSMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDSYIKTL+ +VGSE+EARMKIYSVSTRCY+AFG LVSE+LS+K+KEL  VRWVLPDS
Sbjct: 121 EIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRR 240
           YLDV+NKDYGGEPFI+G+AVPYDPKYHEEWIRNNARANERNRRNDRPRN DRSRNFERRR
Sbjct: 181 YLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRR 240

Query: 241 ENMQNRDFPNASGNQPTGPNMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPNNW 300
           E                  NM GGPP   PP     PP P + GG      APPPP  + 
Sbjct: 241 E------------------NMAGGPPPQRPP--MGGPPPPPHIGGS-----APPPP--HM 300

Query: 301 GGPPPPPPNNYRGGPPPPPNNFEGAPPPRNYAGAPPPPLNNFEGAPPPRNYAGAPPP--- 360
           GG  PPPP+  +   PPPPNN  G   P  Y     PP NN  G  PP+NY G PPP   
Sbjct: 301 GGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGA---PPQNNMGGPRPPQNYGGTPPPNYG 360

Query: 361 -PPPPSNSGPAPPRNYGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGVGSPQ-QNSH 412
             PP +N G APP NYGG  P  YG   P  Y G PP  NNY    +G+  PQ QN++
Sbjct: 361 GAPPANNMGGAPPPNYGGGPPPQYGAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNNY 382

[Close]

BLAST of MS002768 vs. TAIR 10
Match: AT1G53260.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 32763 Blast hits to 18534 proteins in 929 species: Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi - 5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982 (source: NCBI BLink). )

HSP 1 Score: 194.1 bits (492), Expect = 2.3e-49
Identity = 152/294 (51.70%), Postives = 179/294 (60.88%), Query Frame = 0


Query: 140 MKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVP 199
           MKIYSVS +CYFAFG LVSE+LS+KIKELPKV+WVLPDSYLD KNKDYGGEPFI+G+AVP
Sbjct: 1   MKIYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVP 60

Query: 200 YDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQNRDFPN--ASGNQPTGP 259
           YDPKYHEEWIRNNA A   NRR  RPRN D  RN    ++    R  PN    G  P  P
Sbjct: 61  YDPKYHEEWIRNNANATNENRRPRRPRNSDGGRNDRGNQDTGYRRPPPNQGMGGAPPPPP 120

Query: 260 NMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAPPPPPN---NWGGPPPPPPN-NYRGGP 319
           ++G  P  NMPP +  PP   QN+ G       PPPPPN   N+ GPP P  N NY+G  
Sbjct: 121 HIGNNP--NMPP-HIQPPNMNQNYRG-------PPPPPNMNQNYQGPPAPNMNQNYQG-- 180

Query: 320 PPPPNNFEGAPPPRNYAGAPPPPLN-NFEGAPPP---RNYAGAPPPPPPPSNSGPAPPRN 379
            PPP+N       +NY G PPP +N +++G PPP   ++Y G     PPPSN G    +N
Sbjct: 181 -PPPSNM-----GQNYQGPPPPNMNQSYQGPPPPNMNQSYQG-----PPPSNMG----QN 240

Query: 380 YGGPQPSNYGGPQPNNYWGGPPPPNNYGGPSNGV---GSPQQNSHGGAMQSNAH 421
           Y GP   +   P  +  + GPPPPN  GG S      G  QQ   GG MQ   +
Sbjct: 241 YRGP---SLPPPNMSQNYEGPPPPNMNGGWSGNYQQNGGYQQQGQGGGMQQQPY 264

[Close]

BLAST of MS002768 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 189.1 bits (479), Expect = 7.3e-48
Identity = 119/250 (47.60%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 10  LPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRLSPA-PSARE 69
           L KTL  ++ +S SF T        SS S F++     PL   V++    L P   S R 
Sbjct: 14  LNKTLSSSTSYSSSFPT-------LSSRSRFAM-----PLIEKVSSSRTSLGPCYISTRP 73

Query: 70  FSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEIIDSYIKTL 129
            ++ +  S LNDP+PNWSNRPPKETILLDGCD+EHWL+VME  + +PT +E+I+SY+KTL
Sbjct: 74  KTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTL 133

Query: 130 SMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYG 189
           + V+G EEEA+ KIYSV T  Y  FG L+SEELS K+K LP V WVLPDSYLDV NKDYG
Sbjct: 134 TSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYG 193

Query: 190 GEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQ-NRDFP 249
           G+ ++ G+ +P  P+Y         R  E+     RPR       ++RRRE MQ  R  P
Sbjct: 194 GDLYVEGKVIP-RPQY---------RFTEQRHTRPRPR-----PRYDRRRETMQVERREP 236

Query: 250 NASGNQPTGP 258
           +   + P  P
Sbjct: 254 SMGLHSPVNP 236

[Close]

BLAST of MS002768 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-47
Identity = 118/250 (47.20%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 10  LPKTLILASMFSRSFLTATGAAVSASSHSSFSLLRRLRPLAAIVAADFRRLSPA-PSARE 69
           L KTL  ++ +S SF T        SS S F++     PL   V++    L P   S R 
Sbjct: 14  LNKTLSSSTSYSSSFPT-------LSSRSRFAM-----PLIEKVSSSRTSLGPCYISTRP 73

Query: 70  FSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEIIDSYIKTL 129
            ++ +  S LNDP+PNWSNRPPKETILLDGCD+EHWL+VME  + +PT +E+I+SY+KTL
Sbjct: 74  KTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTL 133

Query: 130 SMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYG 189
           + V+G +EEA+ KIYSV T  Y  FG L+SEELS K+K LP V WVLPDSYLDV NKDYG
Sbjct: 134 TSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYG 193

Query: 190 GEPFINGQAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQ-NRDFP 249
           G+ ++ G+ +P  P+Y         R  E+     RPR       ++RRRE MQ  R  P
Sbjct: 194 GDLYVEGKVIP-RPQY---------RFTEQRHTRPRPR-----PRYDRRRETMQVERREP 236

Query: 250 NASGNQPTGP 258
           +   + P  P
Sbjct: 254 SMGLHSPVNP 236

[Close]

BLAST of MS002768 vs. TAIR 10
Match: AT1G53260.2 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 246 Blast hits to 241 proteins in 32 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 16; Plants - 212; Viruses - 1; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-40
Identity = 94/154 (61.04%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 140 MKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVP 199
           MKIYSVS +CYFAFG LVSE+LS+KIKELPKV+WVLPDSYLD KNKDYGGEPFI+G+AVP
Sbjct: 1   MKIYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVP 60

Query: 200 YDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQNRDFPN--ASGNQPTGP 259
           YDPKYHEEWIRNNA A   NRR  RPRN D  RN    ++    R  PN    G  P  P
Sbjct: 61  YDPKYHEEWIRNNANATNENRRPRRPRNSDGGRNDRGNQDTGYRRPPPNQGMGGAPPPPP 120

Query: 260 NMGGGPPSNMPPNNFAPPPQPQNHGGMPSSNYAP 292
           ++G  P  NMPP +  PP   QN+ G  ++ + P
Sbjct: 121 HIGNNP--NMPP-HIQPPNMNQNYRGTTTAKHEP 151

The following BLAST results are available for this feature:

BLAST of MS002768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142853.1	1.2e-238	99.31	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Momo...	[more]
XP_022922870.1	5.4e-178	80.23	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
XP_022984463.1	9.3e-178	78.83	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
XP_022984464.1	2.5e-175	79.54	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
XP_023552822.1	2.5e-175	79.22	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucu...	[more]

BLAST of MS002768 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA5	3.1e-107	59.57	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
Q84JZ6	1.0e-46	47.60	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9CAH0	6.5e-41	50.30	Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana ...	[more]
O82169	1.8e-35	42.13	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]
O22793	1.5e-34	49.19	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of MS002768 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPB1	6.0e-239	99.31	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Mo...	[more]
A0A6J1EA12	2.6e-178	80.23	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
A0A6J1JAJ8	4.5e-178	78.83	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
A0A6J1JAK6	1.2e-175	79.54	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
A0A6J1E5B5	6.1e-175	79.63	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]

BLAST of MS002768 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15000.1	2.2e-108	59.57	cobalt ion binding	[more]
AT1G53260.1	2.3e-49	51.70	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cob...	[more]
AT3G06790.2	7.3e-48	47.60	plastid developmental protein DAG, putative	[more]
AT3G06790.1	2.8e-47	47.20	plastid developmental protein DAG, putative	[more]
AT1G53260.2	1.5e-40	61.04	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cob...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 398..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..260
None	No IPR available	PANTHER	PTHR31346:SF25	MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL-LIKE	coord: 12..397
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 12..397

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002768.1	MS002768.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing