MS002756 (gene) Bitter gourd (TR) v1

Overview


Name	MS002756
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold66: 312790 .. 313937 (-)
RNA-Seq Expression	MS002756
Synteny	MS002756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAGGCAGACTGCAAGAAGAATGGAGCCGGAAAAAATGGCGGACGATCATGTCGTGGAAGCCGAATACGGTTTCAACAAACCCAGAAATCGGAAAAGAAAGGCTGATATGGTAGCCGACGGTACTAGTGATGGCCGGCGAGCAACGCTAATGAAAAGAATGACATTGTCTTTGACAAAGCCATCGTTTGTTATGGGGCTTGGACCCAAGATGGTGAGGGTAGAAAATCGAGTTACATTGCGGAATGTGTTGCGCAAACTTCTGAGGCAGCAGAATTGGGTAGAAGCAAGTGGAGTACTGAGCATGTTACTGAAAGGGACTTTGCGGGATAGATCTCCTATTAAGAATCGATTGAAGTATTTGGTAAAATACACCCCCATACTCTTTTATATCTCTATTTCTTTCATTCATTGGTATTCAATTTTGAAAAACTATGCATATTTCTAATGGAAAAGTAGGTGAAGGGATTAGAAACATGATATGTGGAAAATATGCTTGCTGTGGACGATTTAAATTTTGTGGTTCTTGCATCCTAATTACAGACCAATCTTTCTTGTTCATGGAATAGGCCACGAACTTTGTGTAACTTAAATATTTGAACTTGTGCACTTAACATTTTAAATACTTCTGTGTATGCCTCAGATTAGAAACAGAGATAATTGTAAAATGCTAGGGGAGGAAGGGGTGCTCTGTCTTTGATAATGGATCTGCTTCATGAGGACCCTTAGAGTTAGGCATCCTGTCCCTTTCAGTTCTATGTTATTTCTTTCTTCATAGGACGGTACCTGTTTATTTATTTATTTATTTTATTTTATATATATATATATAAGAAATTGATATCTTATGTATTATCTATCTAGGTTGGTGTAATGTGCATGTGCTTATTTACATATAATTCGTGTGGTGTATTTAGTTTTGGTGGTGCCCTAAACACTTGCATTTTATTCAACTTGTCATTTAGAGACTTCCAAGTTCCACATTAATATACCAAATAGATTCTTTTTACTGAATGTGACAAAAATCCTTTTTAGGCTTCTATGGAGCTTCTTAAGCATATAGAAGGTGATCGTATGAGACCAAATAGGATCAAGCACGTCTATGACAACTGGATGAGGAAGATTGGATCAATGAAGAATTGGCCAATTGAG

mRNA sequence

CTGAGGCAGACTGCAAGAAGAATGGAGCCGGAAAAAATGGCGGACGATCATGTCGTGGAAGCCGAATACGGTTTCAACAAACCCAGAAATCGGAAAAGAAAGGCTGATATGGTAGCCGACGGTACTAGTGATGGCCGGCGAGCAACGCTAATGAAAAGAATGACATTGTCTTTGACAAAGCCATCGTTTGTTATGGGGCTTGGACCCAAGATGGTGAGGGTAGAAAATCGAGTTACATTGCGGAATGTGTTGCGCAAACTTCTGAGGCAGCAGAATTGGGTAGAAGCAAGTGGAGTACTGAGCATGTTACTGAAAGGGACTTTGCGGGATAGATCTCCTATTAAGAATCGATTGAAGTATTTGGCTTCTATGGAGCTTCTTAAGCATATAGAAGGTGATCGTATGAGACCAAATAGGATCAAGCACGTCTATGACAACTGGATGAGGAAGATTGGATCAATGAAGAATTGGCCAATTGAG

Coding sequence (CDS)

CTGAGGCAGACTGCAAGAAGAATGGAGCCGGAAAAAATGGCGGACGATCATGTCGTGGAAGCCGAATACGGTTTCAACAAACCCAGAAATCGGAAAAGAAAGGCTGATATGGTAGCCGACGGTACTAGTGATGGCCGGCGAGCAACGCTAATGAAAAGAATGACATTGTCTTTGACAAAGCCATCGTTTGTTATGGGGCTTGGACCCAAGATGGTGAGGGTAGAAAATCGAGTTACATTGCGGAATGTGTTGCGCAAACTTCTGAGGCAGCAGAATTGGGTAGAAGCAAGTGGAGTACTGAGCATGTTACTGAAAGGGACTTTGCGGGATAGATCTCCTATTAAGAATCGATTGAAGTATTTGGCTTCTATGGAGCTTCTTAAGCATATAGAAGGTGATCGTATGAGACCAAATAGGATCAAGCACGTCTATGACAACTGGATGAGGAAGATTGGATCAATGAAGAATTGGCCAATTGAG

Protein sequence

LRQTARRMEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGLGPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELLKHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE

Homology

[Close]

BLAST of MS002756 vs. NCBI nr
Match: XP_022142927.1 (uncharacterized protein LOC111012919 [Momordica charantia])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL
Sbjct: 1   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL
Sbjct: 61  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE
Sbjct: 121 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 153

[Close]

BLAST of MS002756 vs. NCBI nr
Match: KAG7031054.1 (hypothetical protein SDJN02_05093 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE M D  V+EAEYG  +   RKRK D  ADG++DGRRA  MK++TL+LTKPSFV+G+
Sbjct: 1   MEPELMGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY  SMELL
Sbjct: 61  GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153

[Close]

BLAST of MS002756 vs. NCBI nr
Match: KAG6600392.1 (hypothetical protein SDJN03_05625, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE M D  V+EAEYG  +   RKRK D  ADG++DGRRA  MK++TL+LTKPSFV+G+
Sbjct: 1   MEPELMGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY  SMELL
Sbjct: 61  GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153

[Close]

BLAST of MS002756 vs. NCBI nr
Match: XP_022941583.1 (uncharacterized protein LOC111446895 [Cucurbita moschata])

HSP 1 Score: 245.0 bits (624), Expect = 4.5e-61
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE + D  V+EAEYG  +   RKRK D  ADG++DGRRA  MK++TL+LTKPSFV+G+
Sbjct: 1   MEPELVGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY  SMELL
Sbjct: 61  GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153

[Close]

BLAST of MS002756 vs. NCBI nr
Match: XP_023536647.1 (uncharacterized protein LOC111797853 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 117/153 (76.47%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE M D  V+EAEYG  +   RKRK D   DG++DGRRA  M+++TL+LTKPSFV+G+
Sbjct: 1   MEPELMGDTLVMEAEYGSERSTGRKRKPDTAVDGSNDGRRAAAMRKITLALTKPSFVLGI 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY  SMELL
Sbjct: 61  GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153

[Close]

BLAST of MS002756 vs. ExPASy TrEMBL
Match: A0A6J1CPA4 (uncharacterized protein LOC111012919 OS=Momordica charantia OX=3673 GN=LOC111012919 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.1e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL
Sbjct: 1   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL
Sbjct: 61  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE
Sbjct: 121 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 153

[Close]

BLAST of MS002756 vs. ExPASy TrEMBL
Match: A0A6J1FSH8 (uncharacterized protein LOC111446895 OS=Cucurbita moschata OX=3662 GN=LOC111446895 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.2e-61
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE + D  V+EAEYG  +   RKRK D  ADG++DGRRA  MK++TL+LTKPSFV+G+
Sbjct: 1   MEPELVGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY  SMELL
Sbjct: 61  GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153

[Close]

BLAST of MS002756 vs. ExPASy TrEMBL
Match: A0A6J1IWZ8 (uncharacterized protein LOC111479331 OS=Cucurbita maxima OX=3661 GN=LOC111479331 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE M D  V+EAE+G  +   RKRK D  ADG++DGRRA  MK++TL+LTKPSFV+G+
Sbjct: 1   MEPELMGDTLVMEAEHGSERSTGRKRKLDTEADGSNDGRRAAAMKKITLALTKPSFVLGI 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
           GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY  SMELL
Sbjct: 61  GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153

[Close]

BLAST of MS002756 vs. ExPASy TrEMBL
Match: A0A0A0KVM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089250 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 118/160 (73.75%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   LRQTARRMEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTK 60
           + + A++MEPE+MAD  +VEAEYG N P +RKRKAD  AD  +DGRRATLMKR+ LSLT+
Sbjct: 4   ITKAAKKMEPEQMADRSMVEAEYGSNIPTSRKRKADTTADCNNDGRRATLMKRIKLSLTR 63

Query: 61  PSFVMGLGPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKY 120
           PSFV+GL PKMVR ENR+TLRNVL KL+RQQNWVEASGVLSMLL+GTLRD SPI+NRLKY
Sbjct: 64  PSFVLGLAPKMVRAENRITLRNVLHKLMRQQNWVEASGVLSMLLQGTLRDNSPIRNRLKY 123

Query: 121 LASMELLKHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
            ASMELLK IEGDRMRP+RI+H+YD WM+K G +K+WPIE
Sbjct: 124 SASMELLKRIEGDRMRPDRIRHIYDIWMKKNGPLKHWPIE 163

[Close]

BLAST of MS002756 vs. ExPASy TrEMBL
Match: A0A1S3BS63 (uncharacterized protein LOC103492916 OS=Cucumis melo OX=3656 GN=LOC103492916 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.7e-59
Identity = 117/153 (76.47%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 8   MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
           MEPE+MAD  V+E EYG   P +RKRKAD  ADG +D RRATLMKR+ LSLTKPSFV+GL
Sbjct: 1   MEPEQMADRPVMEIEYGSIIPFSRKRKADPTADGNNDSRRATLMKRIKLSLTKPSFVLGL 60

Query: 68  GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
            PKMVR ENR+TLRN L KL+RQQNWVEASGVLSMLL+GTLRD SPI+NRLKY ASMELL
Sbjct: 61  APKMVRAENRITLRNALHKLMRQQNWVEASGVLSMLLQGTLRDNSPIRNRLKYSASMELL 120

Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
           KHIEGDRMRP+RI+H+YD WM+K GS+K+WPIE
Sbjct: 121 KHIEGDRMRPDRIRHIYDIWMKKNGSLKHWPIE 153

[Close]

BLAST of MS002756 vs. TAIR 10
Match: AT1G53200.1 (unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 19  VEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGLGPKMVRVENRV 78
           VE E   +K    K K   V+    D       KR+     KPS+++ +GPK  R E   
Sbjct: 16  VETEEKTDKLEKIKAKRRRVSSSEIDS-DTQKYKRIQRCRAKPSYLLCIGPKSSRSEYLN 75

Query: 79  TLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELLKHIEGDRMRPN 138
            L  +LR+LLR ++W +AS VLS+L+KGT+ D  P  NRLKY A ++++ H E ++ + +
Sbjct: 76  RLPGLLRELLRNRHWNDASRVLSVLMKGTINDPCPKMNRLKYEAHIQIVSHSETNKNKAD 135

Query: 139 RIKHVYDNWMRKIG 153
            I  +YD W+ +IG
Sbjct: 136 EIGRIYDTWIGQIG 148

The following BLAST results are available for this feature:

BLAST of MS002756 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142927.1	1.3e-79	100.00	uncharacterized protein LOC111012919 [Momordica charantia]	[more]
KAG7031054.1	1.5e-61	77.78	hypothetical protein SDJN02_05093 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600392.1	1.5e-61	77.78	hypothetical protein SDJN03_05625, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022941583.1	4.5e-61	77.12	uncharacterized protein LOC111446895 [Cucurbita moschata]	[more]
XP_023536647.1	1.0e-60	76.47	uncharacterized protein LOC111797853 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS002756 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPA4	6.1e-80	100.00	uncharacterized protein LOC111012919 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1FSH8	2.2e-61	77.12	uncharacterized protein LOC111446895 OS=Cucurbita moschata OX=3662 GN=LOC1114468...	[more]
A0A6J1IWZ8	4.8e-61	77.12	uncharacterized protein LOC111479331 OS=Cucurbita maxima OX=3661 GN=LOC111479331...	[more]
A0A0A0KVM2	3.1e-60	73.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089250 PE=4 SV=1	[more]
A0A1S3BS63	7.7e-59	76.47	uncharacterized protein LOC103492916 OS=Cucumis melo OX=3656 GN=LOC103492916 PE=...	[more]

BLAST of MS002756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53200.1	1.2e-16	37.31	unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039495	TATA box-binding protein-associated factor RNA polymerase I subunit A-like	PFAM	PF14929	TAF1_subA	coord: 86..155 e-value: 4.2E-14 score: 52.8
None	No IPR available	PANTHER	PTHR36720	TAF RNA POLYMERASE I SUBUNIT A	coord: 13..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002756.1	MS002756.1	mRNA