Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGAGGCAGACTGCAAGAAGAATGGAGCCGGAAAAAATGGCGGACGATCATGTCGTGGAAGCCGAATACGGTTTCAACAAACCCAGAAATCGGAAAAGAAAGGCTGATATGGTAGCCGACGGTACTAGTGATGGCCGGCGAGCAACGCTAATGAAAAGAATGACATTGTCTTTGACAAAGCCATCGTTTGTTATGGGGCTTGGACCCAAGATGGTGAGGGTAGAAAATCGAGTTACATTGCGGAATGTGTTGCGCAAACTTCTGAGGCAGCAGAATTGGGTAGAAGCAAGTGGAGTACTGAGCATGTTACTGAAAGGGACTTTGCGGGATAGATCTCCTATTAAGAATCGATTGAAGTATTTGGTAAAATACACCCCCATACTCTTTTATATCTCTATTTCTTTCATTCATTGGTATTCAATTTTGAAAAACTATGCATATTTCTAATGGAAAAGTAGGTGAAGGGATTAGAAACATGATATGTGGAAAATATGCTTGCTGTGGACGATTTAAATTTTGTGGTTCTTGCATCCTAATTACAGACCAATCTTTCTTGTTCATGGAATAGGCCACGAACTTTGTGTAACTTAAATATTTGAACTTGTGCACTTAACATTTTAAATACTTCTGTGTATGCCTCAGATTAGAAACAGAGATAATTGTAAAATGCTAGGGGAGGAAGGGGTGCTCTGTCTTTGATAATGGATCTGCTTCATGAGGACCCTTAGAGTTAGGCATCCTGTCCCTTTCAGTTCTATGTTATTTCTTTCTTCATAGGACGGTACCTGTTTATTTATTTATTTATTTTATTTTATATATATATATATAAGAAATTGATATCTTATGTATTATCTATCTAGGTTGGTGTAATGTGCATGTGCTTATTTACATATAATTCGTGTGGTGTATTTAGTTTTGGTGGTGCCCTAAACACTTGCATTTTATTCAACTTGTCATTTAGAGACTTCCAAGTTCCACATTAATATACCAAATAGATTCTTTTTACTGAATGTGACAAAAATCCTTTTTAGGCTTCTATGGAGCTTCTTAAGCATATAGAAGGTGATCGTATGAGACCAAATAGGATCAAGCACGTCTATGACAACTGGATGAGGAAGATTGGATCAATGAAGAATTGGCCAATTGAG
mRNA sequence
CTGAGGCAGACTGCAAGAAGAATGGAGCCGGAAAAAATGGCGGACGATCATGTCGTGGAAGCCGAATACGGTTTCAACAAACCCAGAAATCGGAAAAGAAAGGCTGATATGGTAGCCGACGGTACTAGTGATGGCCGGCGAGCAACGCTAATGAAAAGAATGACATTGTCTTTGACAAAGCCATCGTTTGTTATGGGGCTTGGACCCAAGATGGTGAGGGTAGAAAATCGAGTTACATTGCGGAATGTGTTGCGCAAACTTCTGAGGCAGCAGAATTGGGTAGAAGCAAGTGGAGTACTGAGCATGTTACTGAAAGGGACTTTGCGGGATAGATCTCCTATTAAGAATCGATTGAAGTATTTGGCTTCTATGGAGCTTCTTAAGCATATAGAAGGTGATCGTATGAGACCAAATAGGATCAAGCACGTCTATGACAACTGGATGAGGAAGATTGGATCAATGAAGAATTGGCCAATTGAG
Coding sequence (CDS)
CTGAGGCAGACTGCAAGAAGAATGGAGCCGGAAAAAATGGCGGACGATCATGTCGTGGAAGCCGAATACGGTTTCAACAAACCCAGAAATCGGAAAAGAAAGGCTGATATGGTAGCCGACGGTACTAGTGATGGCCGGCGAGCAACGCTAATGAAAAGAATGACATTGTCTTTGACAAAGCCATCGTTTGTTATGGGGCTTGGACCCAAGATGGTGAGGGTAGAAAATCGAGTTACATTGCGGAATGTGTTGCGCAAACTTCTGAGGCAGCAGAATTGGGTAGAAGCAAGTGGAGTACTGAGCATGTTACTGAAAGGGACTTTGCGGGATAGATCTCCTATTAAGAATCGATTGAAGTATTTGGCTTCTATGGAGCTTCTTAAGCATATAGAAGGTGATCGTATGAGACCAAATAGGATCAAGCACGTCTATGACAACTGGATGAGGAAGATTGGATCAATGAAGAATTGGCCAATTGAG
Protein sequence
LRQTARRMEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGLGPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELLKHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE
Homology
BLAST of MS002756 vs. NCBI nr
Match:
XP_022142927.1 (uncharacterized protein LOC111012919 [Momordica charantia])
HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL
Sbjct: 1 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL
Sbjct: 61 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE
Sbjct: 121 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 153
BLAST of MS002756 vs. NCBI nr
Match:
KAG7031054.1 (hypothetical protein SDJN02_05093 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE M D V+EAEYG + RKRK D ADG++DGRRA MK++TL+LTKPSFV+G+
Sbjct: 1 MEPELMGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY SMELL
Sbjct: 61 GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153
BLAST of MS002756 vs. NCBI nr
Match:
KAG6600392.1 (hypothetical protein SDJN03_05625, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE M D V+EAEYG + RKRK D ADG++DGRRA MK++TL+LTKPSFV+G+
Sbjct: 1 MEPELMGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY SMELL
Sbjct: 61 GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153
BLAST of MS002756 vs. NCBI nr
Match:
XP_022941583.1 (uncharacterized protein LOC111446895 [Cucurbita moschata])
HSP 1 Score: 245.0 bits (624), Expect = 4.5e-61
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE + D V+EAEYG + RKRK D ADG++DGRRA MK++TL+LTKPSFV+G+
Sbjct: 1 MEPELVGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY SMELL
Sbjct: 61 GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153
BLAST of MS002756 vs. NCBI nr
Match:
XP_023536647.1 (uncharacterized protein LOC111797853 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 117/153 (76.47%), Postives = 132/153 (86.27%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE M D V+EAEYG + RKRK D DG++DGRRA M+++TL+LTKPSFV+G+
Sbjct: 1 MEPELMGDTLVMEAEYGSERSTGRKRKPDTAVDGSNDGRRAAAMRKITLALTKPSFVLGI 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY SMELL
Sbjct: 61 GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153
BLAST of MS002756 vs. ExPASy TrEMBL
Match:
A0A6J1CPA4 (uncharacterized protein LOC111012919 OS=Momordica charantia OX=3673 GN=LOC111012919 PE=4 SV=1)
HSP 1 Score: 306.6 bits (784), Expect = 6.1e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL
Sbjct: 1 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL
Sbjct: 61 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE
Sbjct: 121 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 153
BLAST of MS002756 vs. ExPASy TrEMBL
Match:
A0A6J1FSH8 (uncharacterized protein LOC111446895 OS=Cucurbita moschata OX=3662 GN=LOC111446895 PE=4 SV=1)
HSP 1 Score: 245.0 bits (624), Expect = 2.2e-61
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE + D V+EAEYG + RKRK D ADG++DGRRA MK++TL+LTKPSFV+G+
Sbjct: 1 MEPELVGDTLVMEAEYGSERSTGRKRKPDTAADGSNDGRRAAAMKKITLALTKPSFVLGI 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY SMELL
Sbjct: 61 GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153
BLAST of MS002756 vs. ExPASy TrEMBL
Match:
A0A6J1IWZ8 (uncharacterized protein LOC111479331 OS=Cucurbita maxima OX=3661 GN=LOC111479331 PE=4 SV=1)
HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE M D V+EAE+G + RKRK D ADG++DGRRA MK++TL+LTKPSFV+G+
Sbjct: 1 MEPELMGDTLVMEAEHGSERSTGRKRKLDTEADGSNDGRRAAAMKKITLALTKPSFVLGI 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
GPKM+R ENR TLRNVLRKL+ QQNWVEASGVLSMLLKGTLRDRSPI+NRLKY SMELL
Sbjct: 61 GPKMLRAENRTTLRNVLRKLMMQQNWVEASGVLSMLLKGTLRDRSPIRNRLKYSVSMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRPNRIKH+YDNWMRKIGSMK WP+E
Sbjct: 121 KHIEGDRMRPNRIKHIYDNWMRKIGSMKRWPVE 153
BLAST of MS002756 vs. ExPASy TrEMBL
Match:
A0A0A0KVM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089250 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 118/160 (73.75%), Postives = 139/160 (86.88%), Query Frame = 0
Query: 1 LRQTARRMEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTK 60
+ + A++MEPE+MAD +VEAEYG N P +RKRKAD AD +DGRRATLMKR+ LSLT+
Sbjct: 4 ITKAAKKMEPEQMADRSMVEAEYGSNIPTSRKRKADTTADCNNDGRRATLMKRIKLSLTR 63
Query: 61 PSFVMGLGPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKY 120
PSFV+GL PKMVR ENR+TLRNVL KL+RQQNWVEASGVLSMLL+GTLRD SPI+NRLKY
Sbjct: 64 PSFVLGLAPKMVRAENRITLRNVLHKLMRQQNWVEASGVLSMLLQGTLRDNSPIRNRLKY 123
Query: 121 LASMELLKHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
ASMELLK IEGDRMRP+RI+H+YD WM+K G +K+WPIE
Sbjct: 124 SASMELLKRIEGDRMRPDRIRHIYDIWMKKNGPLKHWPIE 163
BLAST of MS002756 vs. ExPASy TrEMBL
Match:
A0A1S3BS63 (uncharacterized protein LOC103492916 OS=Cucumis melo OX=3656 GN=LOC103492916 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 7.7e-59
Identity = 117/153 (76.47%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 8 MEPEKMADDHVVEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGL 67
MEPE+MAD V+E EYG P +RKRKAD ADG +D RRATLMKR+ LSLTKPSFV+GL
Sbjct: 1 MEPEQMADRPVMEIEYGSIIPFSRKRKADPTADGNNDSRRATLMKRIKLSLTKPSFVLGL 60
Query: 68 GPKMVRVENRVTLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELL 127
PKMVR ENR+TLRN L KL+RQQNWVEASGVLSMLL+GTLRD SPI+NRLKY ASMELL
Sbjct: 61 APKMVRAENRITLRNALHKLMRQQNWVEASGVLSMLLQGTLRDNSPIRNRLKYSASMELL 120
Query: 128 KHIEGDRMRPNRIKHVYDNWMRKIGSMKNWPIE 161
KHIEGDRMRP+RI+H+YD WM+K GS+K+WPIE
Sbjct: 121 KHIEGDRMRPDRIRHIYDIWMKKNGSLKHWPIE 153
BLAST of MS002756 vs. TAIR 10
Match:
AT1G53200.1 (unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 0
Query: 19 VEAEYGFNKPRNRKRKADMVADGTSDGRRATLMKRMTLSLTKPSFVMGLGPKMVRVENRV 78
VE E +K K K V+ D KR+ KPS+++ +GPK R E
Sbjct: 16 VETEEKTDKLEKIKAKRRRVSSSEIDS-DTQKYKRIQRCRAKPSYLLCIGPKSSRSEYLN 75
Query: 79 TLRNVLRKLLRQQNWVEASGVLSMLLKGTLRDRSPIKNRLKYLASMELLKHIEGDRMRPN 138
L +LR+LLR ++W +AS VLS+L+KGT+ D P NRLKY A ++++ H E ++ + +
Sbjct: 76 RLPGLLRELLRNRHWNDASRVLSVLMKGTINDPCPKMNRLKYEAHIQIVSHSETNKNKAD 135
Query: 139 RIKHVYDNWMRKIG 153
I +YD W+ +IG
Sbjct: 136 EIGRIYDTWIGQIG 148
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022142927.1 | 1.3e-79 | 100.00 | uncharacterized protein LOC111012919 [Momordica charantia] | [more] |
KAG7031054.1 | 1.5e-61 | 77.78 | hypothetical protein SDJN02_05093 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6600392.1 | 1.5e-61 | 77.78 | hypothetical protein SDJN03_05625, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022941583.1 | 4.5e-61 | 77.12 | uncharacterized protein LOC111446895 [Cucurbita moschata] | [more] |
XP_023536647.1 | 1.0e-60 | 76.47 | uncharacterized protein LOC111797853 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CPA4 | 6.1e-80 | 100.00 | uncharacterized protein LOC111012919 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A6J1FSH8 | 2.2e-61 | 77.12 | uncharacterized protein LOC111446895 OS=Cucurbita moschata OX=3662 GN=LOC1114468... | [more] |
A0A6J1IWZ8 | 4.8e-61 | 77.12 | uncharacterized protein LOC111479331 OS=Cucurbita maxima OX=3661 GN=LOC111479331... | [more] |
A0A0A0KVM2 | 3.1e-60 | 73.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089250 PE=4 SV=1 | [more] |
A0A1S3BS63 | 7.7e-59 | 76.47 | uncharacterized protein LOC103492916 OS=Cucumis melo OX=3656 GN=LOC103492916 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT1G53200.1 | 1.2e-16 | 37.31 | unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bact... | [more] |