MS002726 (gene) Bitter gourd (TR) v1

Overview


Name	MS002726
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	thioredoxin-like
Location	scaffold66: 42821 .. 44840 (-)
RNA-Seq Expression	MS002726
Synteny	MS002726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCTGCTTTCTCTTCGCCTTCTTCTTTCTCCGGCCGCCGGACCTCCATCGCCCTCCCGCAGTTCAGAGGCTTGAAGATCTCCCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCCAGTTCCAGGTTTGCTCCGCGTTCCGGGAGAATCGTCTGCGAAGCTCAGGAAACTACTGCCGTAGGTCGGGATTTCGTTCTGCATTTTTCCTTTTGCTGGCTTCTGTTTTAGATCTTTGCTGTCTTGTTTGGTTGTTTGGATGGAGAAGGATAAATTTTAAACGATACTTGGAAGTTTTGTGAATTTTAGATCCTTGGAAGGAGAAGAAAAGATGAAAAATGTACGTTATGGATGGTTTAGAAAGCTTAAGATAAGTTTAATAGTTTCAGTGATATGGAAGCAAAACACACTTCGCAGCAGGGTTATGGATTAAGAGCTTATACTGTGACCTAAAAGTTTTAAGGTGTATTCTGAACGTAATATTTGTTGCTAGTGTCATTTAGTGGAATGATGCTGAAATACATCACAAATCATTTCCTGTTTGAATTTATGTACTTTTCATATTTTTTTTTATACTCTGAAACCTGACAGATGTGTGGATGTTGCGTATTCCCATCCTTACATATGCTTGGATCTGAAGATAGAATACAGTGATAGTAAGTTGCGATGAATCTGAACTGGGTCATAGAAATGCGTTTTACTGTGAAATTAGCTTGAGCTTTAATTTTTTTAAAAAAATAGAATTACTACATCAACGGTCAAGATTTTGAAGCAAGAGGTTAGAGAGAGGGTCTCCGGGGAGGTTGACAACTTAGCATGAGGAGTAGTAGAATGCCAAATTGAGAAGATGAGTTCTGCCGTAATTAGGTTTTTGTTGCTGTTACAGAGAGTGGTGAATAGGGAGTTGGTACGATATCAGTTCAATATGTTCGGAGAAAGTGGCCTAGATGTTATAGAACCTTTTGAATGGTCAAGTTTATTTTGCTTCTGCTTGTACATGCCATCTCCAAGATGTTATTTGTTATCATAAATGTAGGTAATGCCAAATGTTTCAAATAGTGATTCTTAGAGTATGGACTCATGCGTCTCTCTTTTTTTCTGGTGTAAAAAATTCTATAAAGAACCAAAGTTTCAGACTTGATTACATTTGTGTGTGTGTGTAGTTCAGAAGTATTTGTCCAGTTTGCTTTTTAAAAATTTAATTCAATTAGAGAGTTCCTTCTGTTCTTATTTTGGAGCGTTTACTTATTTCAATTTTTTTTTTCCGTTACTCTACGTACTGTCATGTACCTAGTATTTACTTTTTTTATAAGATCATGAAAAGGGGATATTGATGTTTGATCTTAAGAATTGTGACACTTTAGACCGACTCTGACCCCATGTTTCTGTATGCATTGAGTGTTCTAATTCTGGGTCAATTTTTGCGATGTTGGAATTAATCCTGAAGTGTCACAGTACTGAGTCGATGTTAGTATGTAACACAGGAATTTGTTATACATAAAGTATTATTTAATTCTGTGTTATCTTTTGATTCTCCTGTGCTGGTCTGCCCGATCCTCGGGTCAATAATGTTACCTGCAACTATATTTTCCCACTTTCTAACTTTCTTCTCCCACAAAAAAAGTCCGTGTTAAGGTTAAAAGAAATCACATGTTTCTGGAATGTTGCAGTGCCTGCTGCTACAGAAGCTACCTGGCAGTCACTTGTTATTGAAAGTAAATTACCCGTTCTAGTCGAGTTCTGGGCACCATGGTGCGGTCCATGCCGCATGATCCATCCTATAATTGATGCTCTAAGCTCCGAGTATTCGGGAAGATTTAAATTTTACAAGGTTAATACTGATGACAATGCTGCAATTGCATCCCGATACGGTATCAGAAGCATCCCAACTGTCATTATCTTCAAAGGTGGTGAGAAGAAGGAGGCAGTAATTGGTGCAGTTCCCAAATCAACTTTGATTGCCAGCATGGACAAATTCTTG

mRNA sequence

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCTGCTTTCTCTTCGCCTTCTTCTTTCTCCGGCCGCCGGACCTCCATCGCCCTCCCGCAGTTCAGAGGCTTGAAGATCTCCCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCCAGTTCCAGGTTTGCTCCGCGTTCCGGGAGAATCGTCTGCGAAGCTCAGGAAACTACTGCCGTAGTGCCTGCTGCTACAGAAGCTACCTGGCAGTCACTTGTTATTGAAAGTAAATTACCCGTTCTAGTCGAGTTCTGGGCACCATGGTGCGGTCCATGCCGCATGATCCATCCTATAATTGATGCTCTAAGCTCCGAGTATTCGGGAAGATTTAAATTTTACAAGGTTAATACTGATGACAATGCTGCAATTGCATCCCGATACGGTATCAGAAGCATCCCAACTGTCATTATCTTCAAAGGTGGTGAGAAGAAGGAGGCAGTAATTGGTGCAGTTCCCAAATCAACTTTGATTGCCAGCATGGACAAATTCTTG

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCTGCTTTCTCTTCGCCTTCTTCTTTCTCCGGCCGCCGGACCTCCATCGCCCTCCCGCAGTTCAGAGGCTTGAAGATCTCCCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCCAGTTCCAGGTTTGCTCCGCGTTCCGGGAGAATCGTCTGCGAAGCTCAGGAAACTACTGCCGTAGTGCCTGCTGCTACAGAAGCTACCTGGCAGTCACTTGTTATTGAAAGTAAATTACCCGTTCTAGTCGAGTTCTGGGCACCATGGTGCGGTCCATGCCGCATGATCCATCCTATAATTGATGCTCTAAGCTCCGAGTATTCGGGAAGATTTAAATTTTACAAGGTTAATACTGATGACAATGCTGCAATTGCATCCCGATACGGTATCAGAAGCATCCCAACTGTCATTATCTTCAAAGGTGGTGAGAAGAAGGAGGCAGTAATTGGTGCAGTTCCCAAATCAACTTTGATTGCCAGCATGGACAAATTCTTG

Protein sequence

MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPRSGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL

Homology

[Close]

BLAST of MS002726 vs. NCBI nr
Match: XP_022142885.1 (uncharacterized protein LOC111012890 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSAFSSPSSFSGRRTS+ALPQFRGLKISHSFTSHSIRSARSSSRFAPR
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGRIVCEAQETTAVVPAATEATWQSLVIES+LPVLVEFWAPWCGPCRMIHP+IDALSSEY
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

[Close]

BLAST of MS002726 vs. NCBI nr
Match: XP_038905006.1 (thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benincasa hispida])

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-74
Identity = 144/178 (80.90%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ RGLKI+HSFTSHSIRSARS++RF  R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSLALPQCRGLKIAHSFTSHSIRSARSNARFPHR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           S  IVCEAQET A+VPAA+EATW+S+VIESKLPVLVEFWAPWCGPCRMIHPIID LS EY
Sbjct: 61  SATIVCEAQETAAIVPAASEATWKSMVIESKLPVLVEFWAPWCGPCRMIHPIIDELSKEY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +G+FKFYKV+TD+N++IAS+YGIRSIPTVIIFK GEKKEA+IGAVPK+TL ASM+KFL
Sbjct: 121 TGKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 177

[Close]

BLAST of MS002726 vs. NCBI nr
Match: XP_022984702.1 (uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharacterized protein LOC111810091 [Cucurbita pepo subsp. pepo] >KAG6577376.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 141/178 (79.21%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HSFTS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGRIVCEAQET A+VPAA+EATW SLV++S+LPVLVEFWAPWCGPCRMIHPI+D LS +Y
Sbjct: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of MS002726 vs. NCBI nr
Match: XP_022929416.1 (uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73
Identity = 140/178 (78.65%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HS TS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGRIVCEAQET A+VPAA+EATW SLV++S+LPVLVEFWAPWCGPCRMIHPI+D LS +Y
Sbjct: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of MS002726 vs. NCBI nr
Match: XP_004133707.1 (uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical protein Csa_010560 [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 5.3e-71
Identity = 139/177 (78.53%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FS RRTS+ LPQ RGLKI++SFTSHS+RSARS++RF  R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           S  IVCEAQET A+VPAA+EATW+SLV ESKLPV+VEFWAPWCGPCRM+HPIID LS EY
Sbjct: 61  SATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKF 178
            G+FKFYKV+TD N +IASRYGIRSIPTVIIFK GEKKEA+IGAVPK TL ASM+KF
Sbjct: 121 EGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of MS002726 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 6.6e-48
Identity = 102/191 (53.40%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 1   MATVLDSLT------LPCSSAFSSPS---SFSGRRTSIA-LPQFRGLKISHSFTSHSIRS 60
           MA++LDS+T      LP +++ SS S   S S RR S A   +FRGLK S S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSSSRFAPRSGRIVCEAQETTAV---VPAATEATWQSLVIESKLPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+TTA    VP  +++ WQ+ V+ES +PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPIIDALSSEYSGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPK 179
           MIHPI+D L+ +++G+FKFYK+NTD++   A+RYGIRS+PTVIIFKGGEKK+++IGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of MS002726 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42
Identity = 93/181 (51.38%), Postives = 123/181 (67.96%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPS-SFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAP 60
           MA+ L + T  CSS  +S S S S  R   A+P  RG++             R   R   
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRYQALRADSGFAGNR---RGGG 60

Query: 61  RSGRIVC--EAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALS 120
           R   +VC  + Q+T+  VP  T++TWQSLV+ES+LPVLV +WA WCGPC+MI P++  LS
Sbjct: 61  RGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLS 120

Query: 121 SEYSGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKF 179
            EY G+ K YK+NTD+N  IAS+YG+RSIPT++IFK GEKK+AVIGAVP+STLIAS++KF
Sbjct: 121 KEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKF 178

[Close]

BLAST of MS002726 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41
Identity = 81/165 (49.09%), Postives = 115/165 (69.70%), Query Frame = 0


Query: 14  SAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPRSGRIVCEAQETTA 73
           S+  S SS S RR    LP+  GL+I  S +  S+ S     R +     +VCEAQETT 
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVVCEAQETTT 81

Query: 74  VVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDD 133
            +    ++TW SLV+++  PV+V+FWAPWCGPC+MI P+++ L+  Y+G+ KFYK+NTD+
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 134 NAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +     +YG+RSIPT++IF GGEKK+ +IGAVPK+TL +S+DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of MS002726 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-40
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 0


Query: 31  LPQFRGLKISHSFTSHSIRSARSSSRFAPRSGRIVCEA--QETTAVVPAATEATWQSLVI 90
           LPQ RG++ +       +RS R+      R   +VC A  QET+  VP  T++TWQSLV+
Sbjct: 31  LPQCRGVRAAPVV---RLRSGRA------RGVSVVCAAQGQETSFQVPDVTKSTWQSLVV 90

Query: 91  ESKLPVLVEFWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDDNAAIASRYGIRSIPT 150
           ES+LPVLVEFWA WCGPC+MI P+I  LS EY G+   YK+NTD+N  IA+++GIRSIPT
Sbjct: 91  ESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPT 150

Query: 151 VIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           ++IFK GEKK+AVIGAVP+STL++S+DK++
Sbjct: 151 MMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

[Close]

BLAST of MS002726 vs. ExPASy Swiss-Prot
Match: O48737 (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 15  AFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPRSGRIVCEAQETTAV 74
           A S   SFS R+    LP+  GL+     T  S+ S   +SR +     ++CEAQ+T   
Sbjct: 21  ASSPTGSFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATG 80

Query: 75  VPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDDN 134
           +P   ++TW SLV+++  PV V+FWAPWCGPC+MI PI++ L+ +Y+G+FKFYK+NTD++
Sbjct: 81  IPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDES 140

Query: 135 AAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
            A   +YG+RSIPT++IF  GEKK+ +IGAV K TL  S++KFL
Sbjct: 141 PATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of MS002726 vs. ExPASy TrEMBL
Match: A0A6J1CM67 (uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012890 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSAFSSPSSFSGRRTS+ALPQFRGLKISHSFTSHSIRSARSSSRFAPR
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGRIVCEAQETTAVVPAATEATWQSLVIES+LPVLVEFWAPWCGPCRMIHP+IDALSSEY
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

[Close]

BLAST of MS002726 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 141/178 (79.21%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HSFTS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGRIVCEAQET A+VPAA+EATW SLV++S+LPVLVEFWAPWCGPCRMIHPI+D LS +Y
Sbjct: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of MS002726 vs. ExPASy TrEMBL
Match: A0A6J1EN29 (uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC111435994 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-74
Identity = 140/178 (78.65%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HS TS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGRIVCEAQET A+VPAA+EATW SLV++S+LPVLVEFWAPWCGPCRMIHPI+D LS +Y
Sbjct: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of MS002726 vs. ExPASy TrEMBL
Match: A0A0A0L5C6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71
Identity = 139/177 (78.53%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSLTLPCSSA +S ++FS RRTS+ LPQ RGLKI++SFTSHS+RSARS++RF  R
Sbjct: 1   MATVLDSLTLPCSSALAS-TAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           S  IVCEAQET A+VPAA+EATW+SLV ESKLPV+VEFWAPWCGPCRM+HPIID LS EY
Sbjct: 61  SATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKF 178
            G+FKFYKV+TD N +IASRYGIRSIPTVIIFK GEKKEA+IGAVPK TL ASM+KF
Sbjct: 121 EGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of MS002726 vs. ExPASy TrEMBL
Match: A0A6J1FMY5 (uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.1e-69
Identity = 132/178 (74.16%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60
           MATVLDSL LP SS  +S ++FSGRRTS+ALP++R LK+ HSFTSHSI+SARS++RF  R
Sbjct: 1   MATVLDSLALPSSSVLAS-TTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHR 60

Query: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEY 120
           SGR+VCE QET+++VP+A+EATWQS VIES +PVLVEFWAPWCGPCRMIHP++D LS EY
Sbjct: 61  SGRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEY 120

Query: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +G+FKFYKVNTD+ A IAS+  IRSIPTVIIFK GEKKEA+IGAVPK+TL  SMDKFL
Sbjct: 121 AGKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of MS002726 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 191.8 bits (486), Expect = 4.7e-49
Identity = 102/191 (53.40%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 1   MATVLDSLT------LPCSSAFSSPS---SFSGRRTSIA-LPQFRGLKISHSFTSHSIRS 60
           MA++LDS+T      LP +++ SS S   S S RR S A   +FRGLK S S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSSSRFAPRSGRIVCEAQETTAV---VPAATEATWQSLVIESKLPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+TTA    VP  +++ WQ+ V+ES +PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPIIDALSSEYSGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPK 179
           MIHPI+D L+ +++G+FKFYK+NTD++   A+RYGIRS+PTVIIFKGGEKK+++IGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of MS002726 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.2e-42
Identity = 81/165 (49.09%), Postives = 115/165 (69.70%), Query Frame = 0


Query: 14  SAFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPRSGRIVCEAQETTA 73
           S+  S SS S RR    LP+  GL+I  S +  S+ S     R +     +VCEAQETT 
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVVCEAQETTT 81

Query: 74  VVPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDD 133
            +    ++TW SLV+++  PV+V+FWAPWCGPC+MI P+++ L+  Y+G+ KFYK+NTD+
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 134 NAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
           +     +YG+RSIPT++IF GGEKK+ +IGAVPK+TL +S+DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of MS002726 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 15  AFSSPSSFSGRRTSIALPQFRGLKISHSFTSHSIRSARSSSRFAPRSGRIVCEAQETTAV 74
           A S   SFS R+    LP+  GL+     T  S+ S   +SR +     ++CEAQ+T   
Sbjct: 21  ASSPTGSFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATG 80

Query: 75  VPAATEATWQSLVIESKLPVLVEFWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDDN 134
           +P   ++TW SLV+++  PV V+FWAPWCGPC+MI PI++ L+ +Y+G+FKFYK+NTD++
Sbjct: 81  IPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDES 140

Query: 135 AAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 179
            A   +YG+RSIPT++IF  GEKK+ +IGAV K TL  S++KFL
Sbjct: 141 PATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of MS002726 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 51/141 (36.17%), Postives = 90/141 (63.83%), Query Frame = 0


Query: 42  SFTSHSIRSARSSSRFAPRSGRI----VCEAQETTAVVPAATEATWQSLVIESKLPVLVE 101
           SF+  S+R +   S  +  + R+    +C      A V   T+ +W+  V++S+ PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAEV---TQRSWEDSVLKSETPVLVE 93

Query: 102 FWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEK 161
           F+  WCGPCRM+H IID ++ +Y+G+   Y +N D++  +A  Y I+++P V++FK GEK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 162 KEAVIGAVPKSTLIASMDKFL 179
           +E+++G +PK   I+++++ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of MS002726 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-25
Identity = 50/141 (35.46%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 42  SFTSHSIRSARSSSRFAPRSGRI----VCEAQETTAVVPAATEATWQSLVIESKLPVLVE 101
           SF+  S+R +   S  +  + R+    +C      A     T+ +W+  V++S+ PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAA--EVTQRSWEDSVLKSETPVLVE 93

Query: 102 FWAPWCGPCRMIHPIIDALSSEYSGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEK 161
           F+  WCGPCRM+H IID ++ +Y+G+   Y +N D++  +A  Y I+++P V++FK GEK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 162 KEAVIGAVPKSTLIASMDKFL 179
           +E+++G +PK   I+++++ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 172

The following BLAST results are available for this feature:

BLAST of MS002726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142885.1	2.1e-91	98.31	uncharacterized protein LOC111012890 [Momordica charantia]	[more]
XP_038905006.1	1.8e-74	80.90	thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benin...	[more]
XP_022984702.1	2.3e-74	79.21	uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharac...	[more]
XP_022929416.1	1.1e-73	78.65	uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredo...	[more]
XP_004133707.1	5.3e-71	78.53	uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical ...	[more]

BLAST of MS002726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU6	6.6e-48	53.40	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
Q7X8R5	2.4e-42	51.38	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q9SEU8	4.6e-41	49.09	Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2	[more]
Q6H7E4	3.0e-40	56.00	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]
O48737	1.5e-39	47.56	Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 ...	[more]

BLAST of MS002726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CM67	1.0e-91	98.31	uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1J2W9	1.1e-74	79.21	uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904...	[more]
A0A6J1EN29	5.5e-74	78.65	uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A0A0L5C6	2.6e-71	78.53	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920...	[more]
A0A6J1FMY5	3.1e-69	74.16	uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MS002726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15360.1	4.7e-49	53.40	thioredoxin M-type 4	[more]
AT4G03520.1	3.2e-42	49.09	Thioredoxin superfamily protein	[more]
AT1G03680.1	1.0e-40	47.56	thioredoxin M-type 1	[more]
AT2G15570.1	2.1e-25	36.17	Thioredoxin superfamily protein	[more]
AT2G15570.2	3.6e-25	35.46	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 102..111 score: 61.5 coord: 94..102 score: 64.57 coord: 142..153 score: 42.59
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 75..178 e-value: 2.5E-34 score: 119.5
None	No IPR available	PANTHER	PTHR45663:SF34	THIOREDOXIN M-TYPE PROTEIN	coord: 2..178
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 2..178
None	No IPR available	CDD	cd02947	TRX_family	coord: 81..175 e-value: 1.99086E-39 score: 127.674
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 79..176 e-value: 1.2E-35 score: 119.7
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 77..176 e-value: 6.0E-30 score: 103.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 69..178 score: 14.010843
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 95..113
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 74..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002726.1	MS002726.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity