MS002721 (gene) Bitter gourd (TR) v1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATATGGGAGGCAGAGGAGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGGTCTGTGCCATAGGGAGTGCAATTGGTATTCTCTCTTAACCTCTTCGCACATGAATTCTTGATAAGTAACTCATTTGTACGAAGTTGTCACCTAATTAGTTGAGAGTAAAGTAAGATTTTTTATCTTCTTATAAGCTATGTCCAATTTCCCCAACTTTGTAATCAACGTCGCTTGTGTAGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGGCTGAGAGTCTGAATGATGTAGAATCAGGAGGTACTGGTGAAAATGTTGATATGGGAGGCAGAGGAGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGGTCTGTGCCATAGGGAGTGCAATTGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGGCTGAGAGTCTGAATGATGTAGAATCAGGAGGTACTGGTGAAAATGTT GATATGGGAGGCAGAGGAGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGGTCTGTGCCATAGGGAGTGCAATTGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGGCTGAGAGTCTGAATGATGTAGAATCAGGAGGTACTGGTGAAAATGTT DMGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV Homology
BLAST of MS002721 vs. NCBI nr
Match: XP_022142863.1 (uncharacterized protein LOC111012874 [Momordica charantia] >XP_022142864.1 uncharacterized protein LOC111012874 [Momordica charantia]) HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of MS002721 vs. NCBI nr
Match: XP_038903238.1 (uncharacterized protein LOC120089884 [Benincasa hispida]) HSP 1 Score: 114.8 bits (286), Expect = 2.6e-22 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS002721 vs. NCBI nr
Match: XP_022929341.1 (uncharacterized protein LOC111435944 [Cucurbita moschata] >XP_023551825.1 uncharacterized protein LOC111809676 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 113.6 bits (283), Expect = 5.8e-22 Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS002721 vs. NCBI nr
Match: XP_022943152.1 (uncharacterized protein LOC111447969 [Cucurbita moschata] >XP_022943153.1 uncharacterized protein LOC111447969 [Cucurbita moschata]) HSP 1 Score: 113.6 bits (283), Expect = 5.8e-22 Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of MS002721 vs. NCBI nr
Match: XP_023540165.1 (uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo] >XP_023540174.1 uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 113.6 bits (283), Expect = 5.8e-22 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS002721 vs. ExPASy TrEMBL
Match: A0A6J1CPB9 (uncharacterized protein LOC111012874 OS=Momordica charantia OX=3673 GN=LOC111012874 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of MS002721 vs. ExPASy TrEMBL
Match: A0A6J1FS83 (uncharacterized protein LOC111447969 OS=Cucurbita moschata OX=3662 GN=LOC111447969 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.8e-22 Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of MS002721 vs. ExPASy TrEMBL
Match: A0A6J1EMV3 (uncharacterized protein LOC111435944 OS=Cucurbita moschata OX=3662 GN=LOC111435944 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.8e-22 Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS002721 vs. ExPASy TrEMBL
Match: A0A6J1J744 (uncharacterized protein LOC111483159 OS=Cucurbita maxima OX=3661 GN=LOC111483159 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.2e-22 Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS002721 vs. ExPASy TrEMBL
Match: A0A0A0L386 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104860 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 7.0e-21 Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of MS002721 vs. TAIR 10
Match: AT3G15395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of MS002721 vs. TAIR 10
Match: AT3G15395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of MS002721 vs. TAIR 10
Match: AT3G15395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of MS002721 vs. TAIR 10
Match: AT3G15395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|