MS002606 (gene) Bitter gourd (TR) v1

Overview
NameMS002606
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich protein A3-like
Locationscaffold111: 60953 .. 61776 (-)
RNA-Seq ExpressionMS002606
SyntenyMS002606
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGGCGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATTTGGCTCATGGTGTTGCTCATCATGGAGCAGGATATCCTCCAGGAGCAGGATATCCCCCACCTGGAGGGTATCCTCCACCTCATGGCTATCCACCACAAGGATATCCCCCGGCACACGGCTACCCCCCGGCTGGCTATCCCCCGGGCGCTTATCCTCCCGGCGCATACCCTCCCGGTGCATATCCTGGACCCTCTGCACCACACCATGCAGGTACTGATCCAATTTTACATACATGTATCAGAATTATTTTGGAAGCATCAGGGTTTTAGAACTTTGGAATCGCCCTGTAACCTGTAGAAGCAAAACTTTTGTCTTCAATTACAGTTTGCCTGGGCTGCAGGAATTTTCTGCTGTCTGATATCTGTATACTAAAGTTTACAATTATCCAACATTTTCCATACATATCTCAATTTGTTATTGGACCACATCATACCTCCTGGACAATAGGAAATTACTCAAATTTTCCAAGGAACACGGGGATTCTTGATTATAGTTGATTGTGTATCTTTTGTAAAGTTGTTCATTCCAATTAATCTAAAATTCAGGGCACGGAGTAGCGGGAATGCTCGCCGGTGGTGCTGCCGCTGCGGCAGCTGCTTATGGCGCTCATCATGTCGCCCATGGCGCCGGTCATTACCCCCATGGCGCTGCTCATTACGGGCATGGTGGAAAATTCAAGCACCATGGAAAGTTCAAGCATGGGAAGTTTGGGAAGCACAAACATGGGAAGCACGGGATGTATGGTGGAGGGAAATTCAAGAAGTGGAAG

mRNA sequence

ATGGGGGGCGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATTTGGCTCATGGTGTTGCTCATCATGGAGCAGGATATCCTCCAGGAGCAGGATATCCCCCACCTGGAGGGTATCCTCCACCTCATGGCTATCCACCACAAGGATATCCCCCGGCACACGGCTACCCCCCGGCTGGCTATCCCCCGGGCGCTTATCCTCCCGGCGCATACCCTCCCGGTGCATATCCTGGACCCTCTGCACCACACCATGCAGGGCACGGAGTAGCGGGAATGCTCGCCGGTGGTGCTGCCGCTGCGGCAGCTGCTTATGGCGCTCATCATGTCGCCCATGGCGCCGGTCATTACCCCCATGGCGCTGCTCATTACGGGCATGGTGGAAAATTCAAGCACCATGGAAAGTTCAAGCATGGGAAGTTTGGGAAGCACAAACATGGGAAGCACGGGATGTATGGTGGAGGGAAATTCAAGAAGTGGAAG

Coding sequence (CDS)

ATGGGGGGCGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCGCATTTGGCTCATGGTGTTGCTCATCATGGAGCAGGATATCCTCCAGGAGCAGGATATCCCCCACCTGGAGGGTATCCTCCACCTCATGGCTATCCACCACAAGGATATCCCCCGGCACACGGCTACCCCCCGGCTGGCTATCCCCCGGGCGCTTATCCTCCCGGCGCATACCCTCCCGGTGCATATCCTGGACCCTCTGCACCACACCATGCAGGGCACGGAGTAGCGGGAATGCTCGCCGGTGGTGCTGCCGCTGCGGCAGCTGCTTATGGCGCTCATCATGTCGCCCATGGCGCCGGTCATTACCCCCATGGCGCTGCTCATTACGGGCATGGTGGAAAATTCAAGCACCATGGAAAGTTCAAGCATGGGAAGTTTGGGAAGCACAAACATGGGAAGCACGGGATGTATGGTGGAGGGAAATTCAAGAAGTGGAAG

Protein sequence

MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYPPAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYPHGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK
Homology
BLAST of MS002606 vs. NCBI nr
Match: XP_022136842.1 (glycine-rich protein A3-like [Momordica charantia] >XP_022136843.1 glycine-rich protein A3-like [Momordica charantia] >XP_022136844.1 glycine-rich protein A3-like [Momordica charantia])

HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYP 60

Query: 61  PAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP 120
           PAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP
Sbjct: 61  PAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP 120

Query: 121 HGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           HGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK
Sbjct: 121 HGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 163

BLAST of MS002606 vs. NCBI nr
Match: XP_008451874.1 (PREDICTED: glycine-rich protein A3-like [Cucumis melo] >KAA0040186.1 glycine-rich protein A3-like [Cucumis melo var. makuwa] >TYK16456.1 glycine-rich protein A3-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 3.2e-70
Identity = 149/166 (89.76%), Postives = 152/166 (91.57%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQ-GYPPAHGY 60
           MGGGKDKHDESDKGLFSHLAHGVA HGAGY P  GYPPPGGYPPP GYPP  GYPP+HGY
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVA-HGAGY-PSHGYPPPGGYPPPGGYPPPGGYPPSHGY 60

Query: 61  PPAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHY 120
           PP GYPP  YPPGAYPPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYGAHHVAH AGHY
Sbjct: 61  PPQGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHSAGHY 120

Query: 121 PHGAAHY--GHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           PHG AHY  GHGGKFKHHGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 PHGVAHYGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

BLAST of MS002606 vs. NCBI nr
Match: XP_023553494.1 (glycine-rich protein A3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 150/173 (86.71%), Postives = 153/173 (88.44%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQ-GYPPAHGY 60
           MGGGKDKHDESDKGLFSHLAHGVA HG GYP   GYPPPGGYPPP GYPP  GYPP+HGY
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVA-HGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGY 60

Query: 61  PPAGYPPG------AYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVA 120
           PP GYPPG       YPPGAYPPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYGAHHVA
Sbjct: 61  PPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVA 120

Query: 121 HGAGHYPHGAAHYG-HGGKFKH--HGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           HGAGHYPHG AHYG HGGKFKH  HGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 HGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 172

BLAST of MS002606 vs. NCBI nr
Match: XP_022931474.1 (glycine-rich protein A3-like [Cucurbita moschata] >XP_022931475.1 glycine-rich protein A3-like [Cucurbita moschata] >XP_022931476.1 glycine-rich protein A3-like [Cucurbita moschata] >XP_022931477.1 glycine-rich protein A3-like [Cucurbita moschata] >KAG7015107.1 hypothetical protein SDJN02_22740, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 3.0e-68
Identity = 149/173 (86.13%), Postives = 152/173 (87.86%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQ-GYPPAHGY 60
           MGGGKDKHDESDKGLFSHLAHGVA HG GYP   GYPPPGGYPPP GYPP  GYPP+HGY
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVA-HGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGY 60

Query: 61  PPAGYPPG------AYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVA 120
           PP GYPPG       YPPGAYPPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYG HHVA
Sbjct: 61  PPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVA 120

Query: 121 HGAGHYPHGAAHYG-HGGKFKH--HGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           HGAGHYPHG AHYG HGGKFKH  HGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 HGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 172

BLAST of MS002606 vs. NCBI nr
Match: XP_004150942.2 (glycine-rich protein A3 [Cucumis sativus] >KGN53470.1 hypothetical protein Csa_014664 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 3.0e-68
Identity = 147/173 (84.97%), Postives = 151/173 (87.28%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGA----GYPPGAGYPPPGGYPPPHGYPPQ-GYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAH       GYPP  GYPPPGGYPPP GYPP  GYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  AHGYPPAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHG 120
           +HGYPP GYPP  YPPGA+PPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYGAHHVAH 
Sbjct: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120

Query: 121 AG-HYPHGAAHY----GHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           AG HYPHG AHY    GHGGKFKHHGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173

BLAST of MS002606 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-24
Identity = 91/154 (59.09%), Postives = 101/154 (65.58%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVA---HHGAG-YPPGAGYPPPGGYPPP-HGYPPQGYPP 60
           MGGG D H++ DKGLFS+LA G+A   H+  G YPP AG  PP GYPP   GYPPQGYPP
Sbjct: 1   MGGG-DGHNDQDKGLFSNLAGGLAGGGHYPPGQYPPAAGGYPPQGYPPAGGGYPPQGYPP 60

Query: 61  A-HGYPPAGYPP--GAYPPGAYPP-GAYPGPSAPHHAGH-GVAGMLAGGAAAAAAAYGAH 120
           A  GYPP GYPP  G YPP  YPP G + G SAPHH+GH GVAGM+AGG AAAAAAYG H
Sbjct: 61  AGGGYPPQGYPPAGGGYPPQGYPPAGHHSGSSAPHHSGHGGVAGMVAGGRAAAAAAYGVH 120

Query: 121 HVAHGAGHYPHGAAHYGHGGKFKHHGKFKHGKFG 145
           H+  G         H  HGG    HG + HG  G
Sbjct: 121 HMTQG---------HGSHGG----HGGYAHGAMG 140

BLAST of MS002606 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05
Identity = 43/88 (48.86%), Postives = 48/88 (54.55%), Query Frame = 0

Query: 3   GGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQG-YPPAHGYPP 62
           GG+ +     K + + +    A   A  PP    PPP GY PP GYPPQG YPP  GYPP
Sbjct: 361 GGESRDAAQMKEMMAMMQKMQAQQAAYQPP----PPPQGY-PPQGYPPQGAYPPPQGYPP 420

Query: 63  AGYPPGAYPPGAYPP-GAYPGPSAPHHA 89
            GYPP  YPP  YPP GA P   AP  A
Sbjct: 421 QGYPPQGYPPQGYPPQGAPPQVEAPQGA 443

BLAST of MS002606 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-05
Identity = 34/50 (68.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 34  AGYPPPGGYPPPHGYPPQGYPPAHGYPPAGYPPGAYPP---GAYPPGAYP 81
           A YPP G  PPP GYPPQGYPP  GYPP GYPP  YPP   GA P GA P
Sbjct: 386 AAYPPQGYAPPPQGYPPQGYPP-QGYPPQGYPPQGYPPPPQGAPPQGAPP 434

BLAST of MS002606 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.8e-05
Identity = 39/73 (53.42%), Postives = 40/73 (54.79%), Query Frame = 0

Query: 28  AGYPPGAGYPPPGGYP-------------PPHGY--PPQGYPPAHGYPPAGYPPGAYPPG 86
           A YPP   YPP GGYP             PP GY  PPQGYPPA GYPP GYPP   P G
Sbjct: 385 AAYPPQGAYPPQGGYPPQGYPPPPAQGGYPPQGYPPPPQGYPPAQGYPPQGYPP---PQG 444

BLAST of MS002606 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 6.3e-05
Identity = 32/52 (61.54%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 31 PPGAGYPPPG------GYPPPHGYPPQGYPPAHGYPPAGYPPGAYPPGAYPP 77
          PP   YPPPG      GYPPP GYP QGYPP  GYPP GYP   YP   YPP
Sbjct: 21 PPKDAYPPPGQPYPQQGYPPPQGYPQQGYPP-QGYPPQGYPEQGYPQQGYPP 71

BLAST of MS002606 vs. ExPASy TrEMBL
Match: A0A6J1C8M2 (glycine-rich protein A3-like OS=Momordica charantia OX=3673 GN=LOC111008440 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.9e-85
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYP 60
           MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHGYP 60

Query: 61  PAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP 120
           PAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP
Sbjct: 61  PAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP 120

Query: 121 HGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           HGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK
Sbjct: 121 HGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 163

BLAST of MS002606 vs. ExPASy TrEMBL
Match: A0A5A7TDL9 (Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002540 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 149/166 (89.76%), Postives = 152/166 (91.57%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQ-GYPPAHGY 60
           MGGGKDKHDESDKGLFSHLAHGVA HGAGY P  GYPPPGGYPPP GYPP  GYPP+HGY
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVA-HGAGY-PSHGYPPPGGYPPPGGYPPPGGYPPSHGY 60

Query: 61  PPAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHY 120
           PP GYPP  YPPGAYPPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYGAHHVAH AGHY
Sbjct: 61  PPQGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHSAGHY 120

Query: 121 PHGAAHY--GHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           PHG AHY  GHGGKFKHHGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 PHGVAHYGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

BLAST of MS002606 vs. ExPASy TrEMBL
Match: A0A1S3BRX9 (glycine-rich protein A3-like OS=Cucumis melo OX=3656 GN=LOC103493032 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 149/166 (89.76%), Postives = 152/166 (91.57%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQ-GYPPAHGY 60
           MGGGKDKHDESDKGLFSHLAHGVA HGAGY P  GYPPPGGYPPP GYPP  GYPP+HGY
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVA-HGAGY-PSHGYPPPGGYPPPGGYPPPGGYPPSHGY 60

Query: 61  PPAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHGAGHY 120
           PP GYPP  YPPGAYPPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYGAHHVAH AGHY
Sbjct: 61  PPQGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHSAGHY 120

Query: 121 PHGAAHY--GHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           PHG AHY  GHGGKFKHHGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 PHGVAHYGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

BLAST of MS002606 vs. ExPASy TrEMBL
Match: A0A6J1ETR5 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68
Identity = 149/173 (86.13%), Postives = 152/173 (87.86%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQ-GYPPAHGY 60
           MGGGKDKHDESDKGLFSHLAHGVA HG GYP   GYPPPGGYPPP GYPP  GYPP+HGY
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVA-HGGGYPHPGGYPPPGGYPPPGGYPPPGGYPPSHGY 60

Query: 61  PPAGYPPG------AYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVA 120
           PP GYPPG       YPPGAYPPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYG HHVA
Sbjct: 61  PPQGYPPGHGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGVHHVA 120

Query: 121 HGAGHYPHGAAHYG-HGGKFKH--HGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           HGAGHYPHG AHYG HGGKFKH  HGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 HGAGHYPHGVAHYGHHGGKFKHGKHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 172

BLAST of MS002606 vs. ExPASy TrEMBL
Match: A0A0A0KV55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68
Identity = 147/173 (84.97%), Postives = 151/173 (87.28%), Query Frame = 0

Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHHGA----GYPPGAGYPPPGGYPPPHGYPPQ-GYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAH       GYPP  GYPPPGGYPPP GYPP  GYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  AHGYPPAGYPPGAYPPGAYPPGAYPGPSAPHHAGHGVAGMLAGGAAAAAAAYGAHHVAHG 120
           +HGYPP GYPP  YPPGA+PPGAYPGPSAPHH+GHGVAGMLAGGAAAAAAAYGAHHVAH 
Sbjct: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120

Query: 121 AG-HYPHGAAHY----GHGGKFKHHGKFKHGKFGKHKHGKHGMYGGGKFKKWK 164
           AG HYPHG AHY    GHGGKFKHHGKFKHGKFGKHKHGKHGM+GGGKFKKWK
Sbjct: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173

BLAST of MS002606 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-34
Identity = 112/193 (58.03%), Postives = 119/193 (61.66%), Query Frame = 0

Query: 1   MGGGKDK-HDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPP-QGYPPAHG 60
           MGGGKDK HDE +KG              G+P G  YPP  G  PP GYPP QGYPPA G
Sbjct: 1   MGGGKDKHHDEQEKGFH------------GFPGGGHYPPAQGGYPPQGYPPQQGYPPAGG 60

Query: 61  YPPAGYPPGAYP---------PGAYPPGAYPGPSAPH--HAGHGVAGMLAGGAAAAAAAY 120
           YPPAGYPPGAYP         PG YPP  YP P A H  H+G G+ GM+AG A AAAAAY
Sbjct: 61  YPPAGYPPGAYPAAPGGYPPAPGGYPPAGYPAPGAHHSGHSGGGLGGMIAGAAGAAAAAY 120

Query: 121 GAHHVAH----------GAGHYPHGAAH-YGHG--GKF---KHHGKFKHGKFGKHKHGKH 164
           GAHHV H          G G Y H  AH +GHG  GKF   KH GKFKHGK G  KHGKH
Sbjct: 121 GAHHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHG--KHGKH 179

BLAST of MS002606 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 99/165 (60.00%), Postives = 106/165 (64.24%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPP-GGYPPPHGYPPQGY-PPAHGYPP 63
           GKD H E DK  FSH  H   HHG GYPPGA  PPP G YPPP GYPPQGY PP HGYPP
Sbjct: 2   GKDDHHEQDKRFFSH--HN--HHGHGYPPGAYPPPPQGAYPPPGGYPPQGYPPPPHGYPP 61

Query: 64  AGYPPGAYPPGAYPPGAYPGPSAPHHA-GHGVAGMLAGGAAAAAAAYGAHHVAHGAGHYP 123
           A YPP   PPGAYPP  YPGPS P    G GV G++AG A AAAAA G HH  H  G   
Sbjct: 62  AAYPP---PPGAYPPAGYPGPSGPRPGFGGGVGGLIAGAATAAAAAMGGHHAGHHGG--- 121

Query: 124 HGAAHYGHGGKFKHHGKFKHGKF--GKHKHGKHGMYGGGKFKKWK 164
                YGH G    HGK+K G F  GK+K GKH M+GGGK+K+ K
Sbjct: 122 -----YGHHG----HGKYKRGFFGGGKYKRGKHSMFGGGKYKRGK 147

BLAST of MS002606 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 131.0 bits (328), Expect = 9.0e-31
Identity = 107/195 (54.87%), Postives = 115/195 (58.97%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHG-YPPA 63
           G D  ++ DKG              GYPP AGYPPPG YPP  GYP QGYPP  G YPPA
Sbjct: 2   GGDNDNDKDKGFH------------GYPP-AGYPPPGAYPPA-GYPQQGYPPPPGAYPPA 61

Query: 64  GYPPGAYP--PGAYPP----GAYPG-------PSAP------------HHAGH--GVAGM 123
           GYPPGAYP  PG YPP    G YP        P AP            HH+GH  G+ GM
Sbjct: 62  GYPPGAYPPAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGM 121

Query: 124 LAGGAAAAAAAYGAHHVAHGAGHYPHGAAHYGHGGKFKH-------HGKFKHGKFGKHKH 164
           +AG    AAAAYGAHHVAH + H P+G A YGHG    H       HGKFKHGK GK KH
Sbjct: 122 IAG----AAAAYGAHHVAH-SSHGPYGHAAYGHGFGHGHGYGYGHGHGKFKHGKHGKFKH 177

BLAST of MS002606 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 131.0 bits (328), Expect = 9.0e-31
Identity = 107/195 (54.87%), Postives = 115/195 (58.97%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLAHGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQGYPPAHG-YPPA 63
           G D  ++ DKG              GYPP AGYPPPG YPP  GYP QGYPP  G YPPA
Sbjct: 2   GGDNDNDKDKGFH------------GYPP-AGYPPPGAYPPA-GYPQQGYPPPPGAYPPA 61

Query: 64  GYPPGAYP--PGAYPP----GAYPG-------PSAP------------HHAGH--GVAGM 123
           GYPPGAYP  PG YPP    G YP        P AP            HH+GH  G+ GM
Sbjct: 62  GYPPGAYPPAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGM 121

Query: 124 LAGGAAAAAAAYGAHHVAHGAGHYPHGAAHYGHGGKFKH-------HGKFKHGKFGKHKH 164
           +AG    AAAAYGAHHVAH + H P+G A YGHG    H       HGKFKHGK GK KH
Sbjct: 122 IAG----AAAAYGAHHVAH-SSHGPYGHAAYGHGFGHGHGYGYGHGHGKFKHGKHGKFKH 177

BLAST of MS002606 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-30
Identity = 94/179 (52.51%), Postives = 107/179 (59.78%), Query Frame = 0

Query: 4   GKDKHDESDKGLFSHLA-----------HGVAHHGAGYPPGAGYPPPGGYPPPHGYPPQG 63
           G D+H+ SD+G F +LA           HG  HHG GY     YPPP   PPPHGYPP  
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQYPPHGHGYGHHGHGYGSSYPYPPP---PPPHGYPPVA 61

Query: 64  YPPAHGYPPAGYPPGAYPPGAYPPGAYP--GPSAPHHAGH---GVAGMLAGGAAAAAAAY 123
           YPP  GYPPAGYPP  YPP  YP   YP  G   P H+GH   G+  ++AGG AAAA   
Sbjct: 62  YPPHGGYPPAGYPPAGYPPAGYPAHGYPSHGYPRPSHSGHHHGGIGAIIAGGVAAAA--- 121

Query: 124 GAHHVAHGAGHYPHGAAHYGHGGKFKHHGKFKHGKFGKHKHGKHGMYG---GGKFKKWK 164
           GAHH++H  GHY H   H G+G  +  HGKFKHGKF   K GKHGM+G   G  FKKWK
Sbjct: 122 GAHHMSHHHGHYGHHHGH-GYGYGYHGHGKFKHGKFKHGKFGKHGMFGKHKGKFFKKWK 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136842.11.0e-84100.00glycine-rich protein A3-like [Momordica charantia] >XP_022136843.1 glycine-rich ... [more]
XP_008451874.13.2e-7089.76PREDICTED: glycine-rich protein A3-like [Cucumis melo] >KAA0040186.1 glycine-ric... [more]
XP_023553494.11.0e-6886.71glycine-rich protein A3-like [Cucurbita pepo subsp. pepo][more]
XP_022931474.13.0e-6886.13glycine-rich protein A3-like [Cucurbita moschata] >XP_022931475.1 glycine-rich p... [more]
XP_004150942.23.0e-6884.97glycine-rich protein A3 [Cucumis sativus] >KGN53470.1 hypothetical protein Csa_0... [more]
Match NameE-valueIdentityDescription
P377056.1e-2459.09Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1[more]
P092412.2e-0548.86Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1[more]
P313562.8e-0568.00Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2[more]
O160054.8e-0553.42Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1[more]
Q8LCL86.3e-0561.54Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali... [more]
Match NameE-valueIdentityDescription
A0A6J1C8M24.9e-85100.00glycine-rich protein A3-like OS=Momordica charantia OX=3673 GN=LOC111008440 PE=4... [more]
A0A5A7TDL91.5e-7089.76Glycine-rich protein A3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3BRX91.5e-7089.76glycine-rich protein A3-like OS=Cucumis melo OX=3656 GN=LOC103493032 PE=4 SV=1[more]
A0A6J1ETR51.4e-6886.13glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111437642 PE=4 ... [more]
A0A0A0KV551.4e-6884.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056610 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G19200.12.3e-3458.03proline-rich family protein [more]
AT1G31750.11.4e-3160.00proline-rich family protein [more]
AT5G45350.19.0e-3154.87proline-rich family protein [more]
AT5G45350.29.0e-3154.87proline-rich family protein [more]
AT5G17650.14.4e-3052.51glycine/proline-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00239RHODOPSNTAILcoord: 44..55
score: 86.11
coord: 58..70
score: 39.74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..49
NoneNo IPR availablePANTHERPTHR31248:SF14GLYCINE-RICH PROTEIN A3-LIKEcoord: 1..163
NoneNo IPR availablePANTHERPTHR31248DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATEDcoord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS002606.1MS002606.1mRNA