MS002508 (gene) Bitter gourd (TR) v1

Overview


Name	MS002508
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Glutaredoxin
Location	scaffold318: 637561 .. 638288 (-)
RNA-Seq Expression	MS002508
Synteny	MS002508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTGAAATCAATGGCAGTTGCTTCCAATTTCACCTCCCCTCATCTCACTTCTCCGCGCACTCTTTCTTTCTTCTTCAAGGCGTCCGTTTATTCCCTTCCCTTTCACAACTCCTGCACTTTCAAATCCACTTCCATTTCAACGTATAATGCCGTCAATGGCTCCAGCAGGAGCAAGCTCGTTTCGATCAAAGCCGTCTCATCCTCTTCTTCTTTTGGCTCTAGACTCGAGGAGAGTGTCAAAGCTACTATCTCCCAAAACCCAGTTGTGGTATACTCCAAGACATGGTGTTCGTGAGTTCAAATCTCATCCATTCGATCTTAATATTTGTAATCCCTTTTCAATTTTCTCGATGCCCGTTTTTCTGATTTGTATTGAAATAGGATTCTCATTCTTGGTAATTCTGTTGAAGGTATTCTTCCGACGTTAAGGCGTTGTTCAAGAGGCTTGGGGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTATTTTTTCTTATCTTCGCTTTTAATAACACTTGCACATTAGATATACTCGCTCTGTAATGTTGTTTTCTTGGTAATTTCATGTATTTGATCTCGTGAATCAAATATAATCCGAGCCCATATGTGAGAATCTGTGTTAAGAACTAAGAAGTTTCTCCCCTTCAGGTCTCCAAGGGCCACAATTGCAAAAGGTTCTCGAGAGGCTTACTGGACAGCATACCGTACCAAATGTTTTCATCGGT

mRNA sequence

AGCTTGAAATCAATGGCAGTTGCTTCCAATTTCACCTCCCCTCATCTCACTTCTCCGCGCACTCTTTCTTTCTTCTTCAAGGCGTCCGTTTATTCCCTTCCCTTTCACAACTCCTGCACTTTCAAATCCACTTCCATTTCAACGTATAATGCCGTCAATGGCTCCAGCAGGAGCAAGCTCGTTTCGATCAAAGCCGTCTCATCCTCTTCTTCTTTTGGCTCTAGACTCGAGGAGAGTGTCAAAGCTACTATCTCCCAAAACCCAGTTGTGGTATACTCCAAGACATGGTGTTCGTATTCTTCCGACGTTAAGGCGTTGTTCAAGAGGCTTGGGGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCTCCAAGGGCCACAATTGCAAAAGGTTCTCGAGAGGCTTACTGGACAGCATACCGTACCAAATGTTTTCATCGGT

Coding sequence (CDS)

AGCTTGAAATCAATGGCAGTTGCTTCCAATTTCACCTCCCCTCATCTCACTTCTCCGCGCACTCTTTCTTTCTTCTTCAAGGCGTCCGTTTATTCCCTTCCCTTTCACAACTCCTGCACTTTCAAATCCACTTCCATTTCAACGTATAATGCCGTCAATGGCTCCAGCAGGAGCAAGCTCGTTTCGATCAAAGCCGTCTCATCCTCTTCTTCTTTTGGCTCTAGACTCGAGGAGAGTGTCAAAGCTACTATCTCCCAAAACCCAGTTGTGGTATACTCCAAGACATGGTGTTCGTATTCTTCCGACGTTAAGGCGTTGTTCAAGAGGCTTGGGGTGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCTCCAAGGGCCACAATTGCAAAAGGTTCTCGAGAGGCTTACTGGACAGCATACCGTACCAAATGTTTTCATCGGT

Protein sequence

SLKSMAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIKAVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLTGQHTVPNVFIG

Homology

[Close]

BLAST of MS002508 vs. NCBI nr
Match: XP_022157516.1 (monothiol glutaredoxin-S10-like isoform X1 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-70
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 5   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 64
           MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 65  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 124
           AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL
Sbjct: 61  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 120

Query: 125 QGPQLQKVLERLTGQHTVPNVFIG 149
           QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 QGPQLQKVLERLTGQHTVPNVFIG 144

[Close]

BLAST of MS002508 vs. NCBI nr
Match: XP_022157517.1 (glutaredoxin-C5, chloroplastic-like isoform X2 [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 5   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 64
           MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 65  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 124
           AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL
Sbjct: 61  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 120

Query: 125 QGPQLQKVLERLTGQHTVPNVFI 148
           QGPQLQKVLERLTGQHTVPNVFI
Sbjct: 121 QGPQLQKVLERLTGQHTVPNVFI 143

[Close]

BLAST of MS002508 vs. NCBI nr
Match: XP_038874858.1 (glutaredoxin-C5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 3.1e-56
Identity = 123/150 (82.00%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 5   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 64
           MAV SNFTSP L SPR+LSFFFKASVYSLPF+NSCT KS SIS +NA+N S+R++ +SIK
Sbjct: 1   MAVPSNFTSPRLNSPRSLSFFFKASVYSLPFYNSCTSKSISISKHNALNASTRTRPMSIK 60

Query: 65  AV------SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIE 124
           AV      SSSSSFGSRLEESVK TI+QNPVVVYSKTWCSYSS+VKALF+RLGVQPLVIE
Sbjct: 61  AVSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFQRLGVQPLVIE 120

Query: 125 LDELGLQGPQLQKVLERLTGQHTVPNVFIG 149
           LDELG QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIG 150

[Close]

BLAST of MS002508 vs. NCBI nr
Match: XP_008459988.1 (PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxin-C5 [Cucumis melo var. makuwa])

HSP 1 Score: 223.4 bits (568), Expect = 1.3e-54
Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   SLKSMAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKL 60
           SLKSMAV SNFTS    SPR LSFFFKASV+SLPF+NSCT KS SIS +N++NG +R++ 
Sbjct: 7   SLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNGFTRTRS 66

Query: 61  VSIKAV-------SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQ 120
           +SI++V       SSSSSFGSRLEESVK TI+QNPVVVYSKTWCSYSS+VKALFKRLGVQ
Sbjct: 67  MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQ 126

Query: 121 PLVIELDELGLQGPQLQKVLERLTGQHTVPNVFIG 149
           PLVIELDELG QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 127 PLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of MS002508 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 5.4e-53
Identity = 121/149 (81.21%), Postives = 131/149 (87.92%), Query Frame = 0


Query: 5   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAV-NGSSRSKLVSI 64
           MAV SNFTSP LTS RTLSFFFKASV SLPF+N+C  KS SIS +NA+ NGS+R + +SI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60

Query: 65  KAV----SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIEL 124
           +AV    SSSSSFGSRLEESVK TI+QNPVVVYSKTWCSYSS+VKALFKRLG QPLVIEL
Sbjct: 61  RAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120

Query: 125 DELGLQGPQLQKVLERLTGQHTVPNVFIG 149
           DELG QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIG 149

[Close]

BLAST of MS002508 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31
Identity = 69/94 (73.40%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 57  RSKLVSIKAVSSS--SSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQP 116
           R++ ++ +A SSS  SSFGSR+E+SVK T++ NPVV+YSK+WCSYS +VKALFKR+GVQP
Sbjct: 38  RARSLATRASSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQP 97

Query: 117 LVIELDELGLQGPQLQKVLERLTGQHTVPNVFIG 149
            VIELD+LG QGPQLQKVLERLTGQ TVPNVFIG
Sbjct: 98  HVIELDQLGAQGPQLQKVLERLTGQSTVPNVFIG 131

[Close]

BLAST of MS002508 vs. ExPASy Swiss-Prot
Match: Q8GWS0 (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-31
Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 18  SPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIKAVSSSSSFGSRLE 77
           S  + S  +  S Y      SC+ ++ + S              S  A SSSSSFGSR+E
Sbjct: 25  SSYSFSLIYVGSPYKRCLKQSCSVRAMTSS--------------SSAASSSSSSFGSRME 84

Query: 78  ESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLT 137
           ES++ T+++N VV+YSKTWCSY ++VK LFKRLGVQPLV+ELD+LG QGPQLQKVLERLT
Sbjct: 85  ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 140

Query: 138 GQHTVPNVFI 148
           GQHTVPNVF+
Sbjct: 145 GQHTVPNVFV 140

[Close]

BLAST of MS002508 vs. ExPASy Swiss-Prot
Match: Q8LBS4 (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 9   SNFTSPHLTSPRTLSFFFKASVYS---LPFHNSCTFKSTSISTYNAVNGSSRSKLVSIKA 68
           +N T   L S   +SF   + + +   LPF          I+++  +  S      S+KA
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPLRCS------SVKA 68

Query: 69  V-SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 128
           + SSSSS GS LEE+VK T+++NPVVVYSKTWCSYSS VK+LFK L V+PLV+ELD+LG 
Sbjct: 69  MSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGS 128

Query: 129 QGPQLQKVLERLTGQHTVPNVFIG 149
           +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 129 EGSQLQNVLEKITGQYTVPNVFIG 146

[Close]

BLAST of MS002508 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 36/65 (55.38%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 84  ISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLTGQHTVP 143
           +S N VVV+SKT+C Y + VK L  +LG Q  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSES-DGSDLQNALAEWTGQRTVP 69

Query: 144 NVFIG 149
           NVFIG
Sbjct: 70  NVFIG 73

[Close]

BLAST of MS002508 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 81  KATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLTGQH 140
           K  +S N VVV+SKT+C Y + VK L  +LG +  V+ELD     G ++Q  L   TGQ 
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTES-DGSEIQTALAEWTGQR 66

Query: 141 TVPNVFIG 149
           TVPNVFIG
Sbjct: 67  TVPNVFIG 73

[Close]

BLAST of MS002508 vs. ExPASy TrEMBL
Match: A0A6J1DYE6 (monothiol glutaredoxin-S10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024192 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 5   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 64
           MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 65  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 124
           AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL
Sbjct: 61  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 120

Query: 125 QGPQLQKVLERLTGQHTVPNVFIG 149
           QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 121 QGPQLQKVLERLTGQHTVPNVFIG 144

[Close]

BLAST of MS002508 vs. ExPASy TrEMBL
Match: A0A6J1DUP0 (glutaredoxin-C5, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024192 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 5   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 64
           MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK
Sbjct: 1   MAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIK 60

Query: 65  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 124
           AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL
Sbjct: 61  AVSSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 120

Query: 125 QGPQLQKVLERLTGQHTVPNVFI 148
           QGPQLQKVLERLTGQHTVPNVFI
Sbjct: 121 QGPQLQKVLERLTGQHTVPNVFI 143

[Close]

BLAST of MS002508 vs. ExPASy TrEMBL
Match: A0A5D3DLT6 (Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001430 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.3e-55
Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   SLKSMAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKL 60
           SLKSMAV SNFTS    SPR LSFFFKASV+SLPF+NSCT KS SIS +N++NG +R++ 
Sbjct: 7   SLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNGFTRTRS 66

Query: 61  VSIKAV-------SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQ 120
           +SI++V       SSSSSFGSRLEESVK TI+QNPVVVYSKTWCSYSS+VKALFKRLGVQ
Sbjct: 67  MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQ 126

Query: 121 PLVIELDELGLQGPQLQKVLERLTGQHTVPNVFIG 149
           PLVIELDELG QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 127 PLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of MS002508 vs. ExPASy TrEMBL
Match: A0A1S3CB05 (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.3e-55
Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   SLKSMAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKL 60
           SLKSMAV SNFTS    SPR LSFFFKASV+SLPF+NSCT KS SIS +N++NG +R++ 
Sbjct: 7   SLKSMAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLNGFTRTRS 66

Query: 61  VSIKAV-------SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQ 120
           +SI++V       SSSSSFGSRLEESVK TI+QNPVVVYSKTWCSYSS+VKALFKRLGVQ
Sbjct: 67  MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQ 126

Query: 121 PLVIELDELGLQGPQLQKVLERLTGQHTVPNVFIG 149
           PLVIELDELG QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 127 PLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of MS002508 vs. ExPASy TrEMBL
Match: A0A0A0KA52 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52
Identity = 119/155 (76.77%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   SLKSMAVASNFTSPHLTSPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKL 60
           S KSMAV SNFTS    SPR LSFFFKASV+ LPF+NSCT KS SIS +NA  G +R++ 
Sbjct: 7   SFKSMAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFTGFTRTRP 66

Query: 61  VSIKAV-------SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQ 120
           +SI++V       SSSSSFGSRLEESVK TI+QNPVVVYSKTWCSYS +VKALFKRLGVQ
Sbjct: 67  MSIQSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQ 126

Query: 121 PLVIELDELGLQGPQLQKVLERLTGQHTVPNVFIG 149
           PLVIELDELG QGPQLQKVLERLTGQHTVPNVFIG
Sbjct: 127 PLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 161

[Close]

BLAST of MS002508 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-32
Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 18  SPRTLSFFFKASVYSLPFHNSCTFKSTSISTYNAVNGSSRSKLVSIKAVSSSSSFGSRLE 77
           S  + S  +  S Y      SC+ ++ + S              S  A SSSSSFGSR+E
Sbjct: 25  SSYSFSLIYVGSPYKRCLKQSCSVRAMTSS--------------SSAASSSSSSFGSRME 84

Query: 78  ESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLT 137
           ES++ T+++N VV+YSKTWCSY ++VK LFKRLGVQPLV+ELD+LG QGPQLQKVLERLT
Sbjct: 85  ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 140

Query: 138 GQHTVPNVFI 148
           GQHTVPNVF+
Sbjct: 145 GQHTVPNVFV 140

[Close]

BLAST of MS002508 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 7.6e-29
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 9   SNFTSPHLTSPRTLSFFFKASVYS---LPFHNSCTFKSTSISTYNAVNGSSRSKLVSIKA 68
           +N T   L S   +SF   + + +   LPF          I+++  +  S      S+KA
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPLRCS------SVKA 68

Query: 69  V-SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGL 128
           + SSSSS GS LEE+VK T+++NPVVVYSKTWCSYSS VK+LFK L V+PLV+ELD+LG 
Sbjct: 69  MSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGS 128

Query: 129 QGPQLQKVLERLTGQHTVPNVFIG 149
           +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 129 EGSQLQNVLEKITGQYTVPNVFIG 146

[Close]

BLAST of MS002508 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.9e-24
Identity = 75/171 (43.86%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 9   SNFTSPHLTSPRTLSFFFKASVYS---LPFHNSCTFKSTSISTYNAVNGSSRSKLVSIKA 68
           +N T   L S   +SF   + + +   LPF          I+++  +  S      S+KA
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPLRCS------SVKA 68

Query: 69  V-SSSSSFGSRLEESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDEL-- 128
           + SSSSS GS LEE+VK T+++NPVVVYSKTWCSYSS VK+LFK L V+PLV+ELD+L  
Sbjct: 69  MSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLVS 128

Query: 129 -------------------------GLQGPQLQKVLERLTGQHTVPNVFIG 149
                                    G +G QLQ VLE++TGQ+TVPNVFIG
Sbjct: 129 LGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQYTVPNVFIG 173

[Close]

BLAST of MS002508 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.5e-11
Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 81  KATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLTGQH 140
           K  +S  PVVV+SKT+C Y   VK L  +LG    V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 141 TVPNVFI 148
           TVPNVFI
Sbjct: 83  TVPNVFI 88

[Close]

BLAST of MS002508 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 78  ESVKATISQNPVVVYSKTWCSYSSDVKALFKRLGVQPLVIELDELGLQGPQLQKVLERLT 137
           +  K  ++   VVV+SKT+C Y   VK L ++LG +   +ELD     G Q+Q  L   T
Sbjct: 4   QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTES-DGSQIQSGLAEWT 63

Query: 138 GQHTVPNVFIG 149
           GQ TVPNVFIG
Sbjct: 64  GQRTVPNVFIG 73

The following BLAST results are available for this feature:

BLAST of MS002508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157516.1	3.7e-70	100.00	monothiol glutaredoxin-S10-like isoform X1 [Momordica charantia]	[more]
XP_022157517.1	2.4e-69	100.00	glutaredoxin-C5, chloroplastic-like isoform X2 [Momordica charantia]	[more]
XP_038874858.1	3.1e-56	82.00	glutaredoxin-C5, chloroplastic-like [Benincasa hispida]	[more]
XP_008459988.1	1.3e-54	78.71	PREDICTED: glutaredoxin-C5, chloroplastic [Cucumis melo] >TYK24597.1 glutaredoxi...	[more]
XP_023549357.1	5.4e-53	81.21	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS002508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0J3L4	1.6e-31	73.40	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
Q8GWS0	2.1e-31	56.15	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
Q8LBS4	1.1e-27	52.08	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
O81187	1.2e-10	55.38	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
P55143	3.5e-10	50.00	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of MS002508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYE6	1.8e-70	100.00	monothiol glutaredoxin-S10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1DUP0	1.2e-69	100.00	glutaredoxin-C5, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3DLT6	6.3e-55	78.71	Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G0014...	[more]
A0A1S3CB05	6.3e-55	78.71	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1	[more]
A0A0A0KA52	2.9e-52	76.77	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G08786...	[more]

BLAST of MS002508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28730.1	1.5e-32	56.15	Glutaredoxin family protein	[more]
AT2G20270.1	7.6e-29	52.08	Thioredoxin superfamily protein	[more]
AT2G20270.2	1.9e-24	43.86	Thioredoxin superfamily protein	[more]
AT5G63030.1	5.5e-11	50.75	Thioredoxin superfamily protein	[more]
AT5G40370.1	1.0e-09	45.07	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 89..107 score: 36.18 coord: 135..148 score: 57.14
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 70..148 e-value: 2.0E-25 score: 90.6
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 62..148
None	No IPR available	PANTHER	PTHR45694:SF18	GLUTAREDOXIN 2	coord: 62..148
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 77..148 score: 16.807255
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 88..148 e-value: 2.56434E-27 score: 95.2991
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 89..148 e-value: 2.1E-13 score: 50.3
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 77..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002508.1	MS002508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity