MS002493 (gene) Bitter gourd (TR) v1

Overview


Name	MS002493
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Location	scaffold318: 525800 .. 526237 (+)
RNA-Seq Expression	MS002493
Synteny	MS002493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTAAAACTAAAATGGCTCTTTTACTTCTCTTGGCGGCTCTGGCAGTGGTTCAACCATATACCGCGGAGGTGCTCGTTCCACTGCCGCTCCCACGGTGGCGTATTCATGTGGTTAACGGGCTGAGCAACGACACCCTTTTCGTGCATTGTAAGTCTAAGGACGATGATTTAGGCAACCACAATTTGGTCCACCGGGGAGATGAATTCCAATGGACTTTTAAGGTAAATTTTTGGGGAACAACGTTGTTCTGGTGCTATTTGGAGAAACCAAATTTCAATGTGTCATTCGAATCGTATTGGGTTGAGAAACATGAACCTTGGCTCAATTCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCAAAAGACGATGGTATTTACTTGAAAAACAATCTTGCGAACGTTGATGAGCTTGTTCATGAGTGGAAAAAAATT

mRNA sequence

CTTGTTAAAACTAAAATGGCTCTTTTACTTCTCTTGGCGGCTCTGGCAGTGGTTCAACCATATACCGCGGAGGTGCTCGTTCCACTGCCGCTCCCACGGTGGCGTATTCATGTGGTTAACGGGCTGAGCAACGACACCCTTTTCGTGCATTGTAAGTCTAAGGACGATGATTTAGGCAACCACAATTTGGTCCACCGGGGAGATGAATTCCAATGGACTTTTAAGGTAAATTTTTGGGGAACAACGTTGTTCTGGTGCTATTTGGAGAAACCAAATTTCAATGTGTCATTCGAATCGTATTGGGTTGAGAAACATGAACCTTGGCTCAATTCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCAAAAGACGATGGTATTTACTTGAAAAACAATCTTGCGAACGTTGATGAGCTTGTTCATGAGTGGAAAAAAATT

Coding sequence (CDS)

CTTGTTAAAACTAAAATGGCTCTTTTACTTCTCTTGGCGGCTCTGGCAGTGGTTCAACCATATACCGCGGAGGTGCTCGTTCCACTGCCGCTCCCACGGTGGCGTATTCATGTGGTTAACGGGCTGAGCAACGACACCCTTTTCGTGCATTGTAAGTCTAAGGACGATGATTTAGGCAACCACAATTTGGTCCACCGGGGAGATGAATTCCAATGGACTTTTAAGGTAAATTTTTGGGGAACAACGTTGTTCTGGTGCTATTTGGAGAAACCAAATTTCAATGTGTCATTCGAATCGTATTGGGTTGAGAAACATGAACCTTGGCTCAATTCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCAAAAGACGATGGTATTTACTTGAAAAACAATCTTGCGAACGTTGATGAGCTTGTTCATGAGTGGAAAAAAATT

Protein sequence

LVKTKMALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

Homology

[Close]

BLAST of MS002493 vs. NCBI nr
Match: KAA0067970.1 (uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 107/141 (75.89%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVH 65
           + +LL+L A+AVVQP TA   VPLPLP+WRIHVVNGL+N+TL VHCKSKDDDLG HNLV 
Sbjct: 10  VVILLVLVAVAVVQPCTA---VPLPLPKWRIHVVNGLNNETLLVHCKSKDDDLGIHNLVS 69

Query: 66  RGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDD 125
           +G+EFQWTFKVNF+GTTLFWCYL+KPNF+VSFES+WVEK  PWLNSRCF  +CIWIAKDD
Sbjct: 70  KGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVEKSHPWLNSRCFHNDCIWIAKDD 129

Query: 126 GIYLKNNLANVDELVHEWKKI 147
            +YL+NNL NVDE +HEW KI
Sbjct: 130 AVYLRNNLDNVDERIHEWNKI 147

[Close]

BLAST of MS002493 vs. NCBI nr
Match: XP_008461539.1 (PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 108/141 (76.60%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVH 65
           M LLL+L A+ +VQP TA   VPLPLP+W IHVVNGL N TLFVHCKSKDDDLGNH L  
Sbjct: 10  MPLLLVLVAVVLVQPSTA---VPLPLPKWHIHVVNGLRNQTLFVHCKSKDDDLGNHTLST 69

Query: 66  RGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDD 125
           +G E QWTFKVNF+GTTLFWCYL+KPNF V+FES+WVEK  PWL SRCFDKNCIWIAKDD
Sbjct: 70  KGQEVQWTFKVNFFGTTLFWCYLKKPNFYVAFESFWVEKTHPWLTSRCFDKNCIWIAKDD 129

Query: 126 GIYLKNNLANVDELVHEWKKI 147
           GIYL+NNL NVDELVH W K+
Sbjct: 130 GIYLRNNLTNVDELVHPWNKM 147

[Close]

BLAST of MS002493 vs. NCBI nr
Match: XP_008462114.1 (PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51
Identity = 99/138 (71.74%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 9   LLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGD 68
           LL+L A+ VVQP TA   VP+P PRW IHVVNGLSN+TL VHCKS+DDDLG  +LV +G 
Sbjct: 12  LLVLVAMVVVQPCTA---VPIPHPRWHIHVVNGLSNETLLVHCKSRDDDLGIQHLV-KGA 71

Query: 69  EFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY 128
           EF WTF+V+ +G TLFWCYLEKPNF+VSFES+WVEKH  WLNSRC+DKNCIWIAKDDGIY
Sbjct: 72  EFHWTFRVSLFGRTLFWCYLEKPNFSVSFESFWVEKH-VWLNSRCYDKNCIWIAKDDGIY 131

Query: 129 LKNNLANVDELVHEWKKI 147
           L+NN  N++E VH W KI
Sbjct: 132 LRNNPVNINERVHNWNKI 144

[Close]

BLAST of MS002493 vs. NCBI nr
Match: XP_004139722.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50
Identity = 99/139 (71.22%), Postives = 114/139 (82.01%), Query Frame = 0


Query: 8   LLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRG 67
           LL++L A+ VVQP  A   VP+P PRW IHVVNGLSN+TL VHCKS DDDLG  +LV RG
Sbjct: 8   LLVVLVAMLVVQPCMA---VPIPHPRWHIHVVNGLSNETLLVHCKSGDDDLGIQHLV-RG 67

Query: 68  DEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGI 127
            EF WTF+V+ +G TLFWCYLEKPNF+VSFES+WVEKH  WLNSRC+DKNCIWIAKDDGI
Sbjct: 68  AEFHWTFRVSLFGRTLFWCYLEKPNFSVSFESFWVEKH-VWLNSRCYDKNCIWIAKDDGI 127

Query: 128 YLKNNLANVDELVHEWKKI 147
           YL+NN  N+DE VH W K+
Sbjct: 128 YLRNNPVNIDERVHNWNKL 141

[Close]

BLAST of MS002493 vs. NCBI nr
Match: XP_022143645.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 93/138 (67.39%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVH 65
           + + L+    AV+Q  TA  L    LP+W IHVVNGLS  TLFVHCKSKDDDLG HNLV 
Sbjct: 10  VVIFLVSEVFAVLQLGTAASLSSALLPKWHIHVVNGLSKVTLFVHCKSKDDDLGVHNLVT 69

Query: 66  RGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDD 125
           RGDEFQWTF+VNFW TTL+WCYL+KPN +VSFES+WVE+   WL  RC DKNCIW AKDD
Sbjct: 70  RGDEFQWTFQVNFWATTLYWCYLKKPNADVSFESFWVEQTHMWLQYRCTDKNCIWTAKDD 129

Query: 126 GIYLKNNLANVDELVHEW 144
           GIYL+NN   VDE +HEW
Sbjct: 130 GIYLRNNPDGVDERIHEW 147

[Close]

BLAST of MS002493 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23
Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 22  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWG 81
           T +++VP  +  W++ VVNGL + +TLF+HCKSK+DDLG  NL  R + F W F  N   
Sbjct: 30  TRDIIVP-KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLH 89

Query: 82  TTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELV 141
           +T FWCY+ K N +++   +W    +  L  RC  KNCIW AK DG+YL N+ +  D L 
Sbjct: 90  STFFWCYMNKDNGHMNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLS 148

Query: 142 HEWK 145
            +W+
Sbjct: 150 RKWE 148

[Close]

BLAST of MS002493 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 22  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWG 81
           T +++VP  +  W++ V NGL + +TLF+HCKSK++DLG+ NL    D F W F  N   
Sbjct: 30  TRDIVVP-KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLH 89

Query: 82  TTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELV 141
           +TLFWCY+ K + +++ + +W    +  L  RC  KNC+W AK+DG+YL N+    D L 
Sbjct: 90  STLFWCYMSKDDGHMNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLS 148

Query: 142 HEWK 145
            +WK
Sbjct: 150 EKWK 148

[Close]

BLAST of MS002493 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 30  PLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYL 89
           P  +  + + N L N  TL  HCKSKDDDLGN  L   G+ + ++F   F+G TL++C  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTL-QPGESWSFSFGRQFFGRTLYFCSF 103

Query: 90  EKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKK 146
             PN + SF+ Y  +  +   +++C    C+W  + +G    N+     +L + W K
Sbjct: 104 SWPNESHSFDIY-KDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNK 158

[Close]

BLAST of MS002493 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 28  PLPLPRWRIHVVNGLSNDTLF-VHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWC 87
           P+  P  R+ + N   ND L  VHCKS+DDD G H ++ +G  + W F VNF  +TL++C
Sbjct: 26  PMKGPLTRVVIYN--DNDYLLGVHCKSRDDDHGFH-ILQKGGLYGWMFYVNFMNSTLYFC 85

Query: 88  YLEKPNFNVS-FESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW 144
              +       F+ Y   +     +SRC  +NC W AK+DGIY    +   + L ++W
Sbjct: 86  GFSQEQVKKGVFDIYKAVRD----SSRC--RNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of MS002493 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 39  VNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNFN--- 98
           +N  + + L VHCKSK++D+G   L   G+   ++FK NFWGTT FWC L K P++    
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYR 91

Query: 99  --VSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY 129
              ++++  +   +          +  W+A+DDGIY
Sbjct: 92  GITAYQAIGLFAKD--------GSSYNWLARDDGIY 118

[Close]

BLAST of MS002493 vs. ExPASy TrEMBL
Match: A0A5A7VL75 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001560 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.3e-60
Identity = 107/141 (75.89%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVH 65
           + +LL+L A+AVVQP TA   VPLPLP+WRIHVVNGL+N+TL VHCKSKDDDLG HNLV 
Sbjct: 10  VVILLVLVAVAVVQPCTA---VPLPLPKWRIHVVNGLNNETLLVHCKSKDDDLGIHNLVS 69

Query: 66  RGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDD 125
           +G+EFQWTFKVNF+GTTLFWCYL+KPNF+VSFES+WVEK  PWLNSRCF  +CIWIAKDD
Sbjct: 70  KGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVEKSHPWLNSRCFHNDCIWIAKDD 129

Query: 126 GIYLKNNLANVDELVHEWKKI 147
            +YL+NNL NVDE +HEW KI
Sbjct: 130 AVYLRNNLDNVDERIHEWNKI 147

[Close]

BLAST of MS002493 vs. ExPASy TrEMBL
Match: A0A1S3CEQ0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.0e-59
Identity = 108/141 (76.60%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVH 65
           M LLL+L A+ +VQP TA   VPLPLP+W IHVVNGL N TLFVHCKSKDDDLGNH L  
Sbjct: 10  MPLLLVLVAVVLVQPSTA---VPLPLPKWHIHVVNGLRNQTLFVHCKSKDDDLGNHTLST 69

Query: 66  RGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDD 125
           +G E QWTFKVNF+GTTLFWCYL+KPNF V+FES+WVEK  PWL SRCFDKNCIWIAKDD
Sbjct: 70  KGQEVQWTFKVNFFGTTLFWCYLKKPNFYVAFESFWVEKTHPWLTSRCFDKNCIWIAKDD 129

Query: 126 GIYLKNNLANVDELVHEWKKI 147
           GIYL+NNL NVDELVH W K+
Sbjct: 130 GIYLRNNLTNVDELVHPWNKM 147

[Close]

BLAST of MS002493 vs. ExPASy TrEMBL
Match: A0A1S3CG89 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500542 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 99/138 (71.74%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 9   LLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGD 68
           LL+L A+ VVQP TA   VP+P PRW IHVVNGLSN+TL VHCKS+DDDLG  +LV +G 
Sbjct: 12  LLVLVAMVVVQPCTA---VPIPHPRWHIHVVNGLSNETLLVHCKSRDDDLGIQHLV-KGA 71

Query: 69  EFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY 128
           EF WTF+V+ +G TLFWCYLEKPNF+VSFES+WVEKH  WLNSRC+DKNCIWIAKDDGIY
Sbjct: 72  EFHWTFRVSLFGRTLFWCYLEKPNFSVSFESFWVEKH-VWLNSRCYDKNCIWIAKDDGIY 131

Query: 129 LKNNLANVDELVHEWKKI 147
           L+NN  N++E VH W KI
Sbjct: 132 LRNNPVNINERVHNWNKI 144

[Close]

BLAST of MS002493 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.6e-49
Identity = 93/138 (67.39%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVH 65
           + + L+    AV+Q  TA  L    LP+W IHVVNGLS  TLFVHCKSKDDDLG HNLV 
Sbjct: 10  VVIFLVSEVFAVLQLGTAASLSSALLPKWHIHVVNGLSKVTLFVHCKSKDDDLGVHNLVT 69

Query: 66  RGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDD 125
           RGDEFQWTF+VNFW TTL+WCYL+KPN +VSFES+WVE+   WL  RC DKNCIW AKDD
Sbjct: 70  RGDEFQWTFQVNFWATTLYWCYLKKPNADVSFESFWVEQTHMWLQYRCTDKNCIWTAKDD 129

Query: 126 GIYLKNNLANVDELVHEW 144
           GIYL+NN   VDE +HEW
Sbjct: 130 GIYLRNNPDGVDERIHEW 147

[Close]

BLAST of MS002493 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 6   MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLV 65
           M LL+    L VV+P    + +P+PL +W IHVVNGLSN+ TLFVHCKSKDDDLG H+L+
Sbjct: 1   MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLI 60

Query: 66  HRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKD 125
            RGDE QWTF++NFW TTL+WC++ KPN +VSF+S+WVEK   WL  RC D  CIW AKD
Sbjct: 61  GRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKD 120

Query: 126 DGIYLKNNLANVDELVHEW 144
           DGIYL+N   N DELVH+W
Sbjct: 121 DGIYLRNIPNNDDELVHKW 139

[Close]

BLAST of MS002493 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 22  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWG 81
           T +++VP  +  W++ VVNGL + +TLF+HCKSK+DDLG  NL  R + F W F  N   
Sbjct: 30  TRDIIVP-KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLH 89

Query: 82  TTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELV 141
           +T FWCY+ K N +++   +W    +  L  RC  KNCIW AK DG+YL N+ +  D L 
Sbjct: 90  STFFWCYMNKDNGHMNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLS 148

Query: 142 HEWK 145
            +W+
Sbjct: 150 RKWE 148

[Close]

BLAST of MS002493 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 107.5 bits (267), Expect = 9.5e-24
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 22  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWG 81
           T +++VP  +  W++ V NGL + +TLF+HCKSK++DLG+ NL    D F W F  N   
Sbjct: 30  TRDIVVP-KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLH 89

Query: 82  TTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELV 141
           +TLFWCY+ K + +++ + +W    +  L  RC  KNC+W AK+DG+YL N+    D L 
Sbjct: 90  STLFWCYMSKDDGHMNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLS 148

Query: 142 HEWK 145
            +WK
Sbjct: 150 EKWK 148

[Close]

BLAST of MS002493 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 30  PLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYL 89
           P  +  + + N L N  TL  HCKSKDDDLGN  L   G+ + ++F   F+G TL++C  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTL-QPGESWSFSFGRQFFGRTLYFCSF 103

Query: 90  EKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKK 146
             PN + SF+ Y  +  +   +++C    C+W  + +G    N+     +L + W K
Sbjct: 104 SWPNESHSFDIY-KDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNK 158

[Close]

BLAST of MS002493 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 47  LFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNFN-----VSFESY 106
           L VHC+SKDDDLG H ++  G ++++TF  N W TT F C +++ PNF      V++E+ 
Sbjct: 41  LKVHCRSKDDDLGEH-ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS 100

Query: 107 WVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNN 133
           W         S+  + +C WI ++DGIY   +
Sbjct: 101 W---------SKALEASCKWIGREDGIYFSQD 122

[Close]

BLAST of MS002493 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 38  VVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNF--N 97
           V N L+N  L V C+SKDD+LG+H ++  G   +  F  N W  TLFWC L K P+F  +
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDH-ILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 98  VSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKK 146
           V+F++Y       W          +WIA++DGIY   +     +  ++W K
Sbjct: 86  VAFDAY----RSQW--KADIGPRYLWIAREDGIYYTQHPETPPKKKYDWPK 129

The following BLAST results are available for this feature:

BLAST of MS002493 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067970.1	1.7e-59	75.89	uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]	[more]
XP_008461539.1	1.5e-58	76.60	PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]	[more]
XP_008462114.1	2.3e-51	71.74	PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]	[more]
XP_004139722.1	1.1e-50	71.22	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_022143645.1	1.8e-48	67.39	S-protein homolog 1-like [Momordica charantia]	[more]

BLAST of MS002493 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.6e-23	43.55	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.3e-22	41.94	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	6.2e-12	32.48	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F2Q9V4	1.4e-11	35.59	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9LW22	1.6e-07	34.38	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]

BLAST of MS002493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VL75	8.3e-60	75.89	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00...	[more]
A0A1S3CEQ0	7.0e-59	76.60	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1	[more]
A0A1S3CG89	1.1e-51	71.74	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500542 PE=3 SV=1	[more]
A0A6J1CPC6	8.6e-49	67.39	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1	[more]
A0A6J1DPJ1	1.2e-45	62.59	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1	[more]

BLAST of MS002493 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.1e-24	43.55	S-protein homologue 1	[more]
AT4G29035.1	9.5e-24	41.94	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	4.4e-13	32.48	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.2e-12	38.04	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	1.1e-11	36.04	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 36..143 e-value: 2.0E-25 score: 89.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 21..144
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 21..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002493.1	MS002493.1	mRNA