Homology
BLAST of MS002473 vs. NCBI nr
Match:
XP_022151059.1 (protein ROOT INITIATION DEFECTIVE 3-like [Momordica charantia] >XP_022151066.1 protein ROOT INITIATION DEFECTIVE 3-like [Momordica charantia])
HSP 1 Score: 902.1 bits (2330), Expect = 1.9e-258
Identity = 439/441 (99.55%), Postives = 441/441 (100.00%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS
Sbjct: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY
Sbjct: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV
Sbjct: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSI+DAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIVDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDED+DT
Sbjct: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDEDT 360
Query: 361 GIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQWRK 420
GIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQWRK
Sbjct: 361 GIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQWRK 420
Query: 421 MYDNLHEFCVNELVDGDQNTR 442
MYDNLHEFCVNELVDGDQNTR
Sbjct: 421 MYDNLHEFCVNELVDGDQNTR 441
BLAST of MS002473 vs. NCBI nr
Match:
XP_022941447.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata] >KAG6608496.1 Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 801.6 bits (2069), Expect = 3.4e-228
Identity = 382/441 (86.62%), Postives = 419/441 (95.01%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSS+DSGIGCWDLHTGAEQLRYKSCASP+HGL+CVG++FLACSQLRDPAAT+GS
Sbjct: 1 MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSWFKPQVEVKSFPAE IM LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWH HY
Sbjct: 61 VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+VFSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
+GYGGSN+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYC+SGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNN++IVRQ+++P +N +SQGSLRKHRSL+PP LAKF NSKD+D+DT
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++IG SG E MGF SP++ VM+NQI +LQ+QG AATGMELER+KRDYG+SMQM QQ
Sbjct: 361 GVIIGRSGPPMESMGF-SPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQ 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRK+YDNLH++CVNEL+DGDQ
Sbjct: 421 WRKLYDNLHQYCVNELLDGDQ 440
BLAST of MS002473 vs. NCBI nr
Match:
XP_023521513.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 800.0 bits (2065), Expect = 1.0e-227
Identity = 379/441 (85.94%), Postives = 419/441 (95.01%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSS+DSGIGCWDLHTGAEQLRYKSCASP+HGL+CVG++FLACSQLRDPAAT+GS
Sbjct: 1 MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSWFKPQVEVKSFPAE IM LA+NNEGTYI+GGGFSGDIYLWEV+SGRLL KWH HY
Sbjct: 61 VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIIGGGFSGDIYLWEVMSGRLLMKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+VFSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
+GYGGSN+II+SSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIVSSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYC+SGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNN++IVRQ+++P +N +SQGSLRKHRSL+PP LAKF NSKD+D+DT
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++IG SG E MGF SP++ VM+NQI +LQ+QG AATGMELER+KRDYG+SMQM QQ
Sbjct: 361 GVIIGRSGPPVESMGF-SPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQ 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRK+YDNLH++CVNEL+DGDQ
Sbjct: 421 WRKLYDNLHQYCVNELLDGDQ 440
BLAST of MS002473 vs. NCBI nr
Match:
XP_022982251.1 (protein ROOT INITIATION DEFECTIVE 3 [Cucurbita maxima])
HSP 1 Score: 789.3 bits (2037), Expect = 1.8e-224
Identity = 376/441 (85.26%), Postives = 416/441 (94.33%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSS+DSGIGCWDLHTGAEQL YKSCASP+HGL+CVG++FLACSQLRDPAAT+GS
Sbjct: 1 MVLVVASSSVDSGIGCWDLHTGAEQLCYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSWFKPQVEVKSFPAE IM LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWH HY
Sbjct: 61 VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+ FSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLEFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
+GYGGSN+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYC+SGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNN++IV+ +++P +N +SQGSLRKHRSL+PP LAKF NSKD+D+DT
Sbjct: 301 IIRVLKHSKGPVNNLLIVQHQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++IG SG E MGF SP++ VM++QI +LQ+QG AATGMELER+KR+YG+SMQM QQ
Sbjct: 361 GVIIGRSGPPMESMGF-SPISSHVMDHQITELQQQGSAATGMELERLKREYGKSMQMQQQ 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRK+YDNLH++CVNEL+DGDQ
Sbjct: 421 WRKLYDNLHQYCVNELLDGDQ 440
BLAST of MS002473 vs. NCBI nr
Match:
XP_038898957.1 (protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida])
HSP 1 Score: 778.5 bits (2009), Expect = 3.1e-221
Identity = 374/441 (84.81%), Postives = 411/441 (93.20%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASP+HGL+CVG++FLACSQLRDPAATAGS
Sbjct: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATAGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSW KPQVEVKSFPAE IM LA+N+EGTYIVGGG SGDIYLWEVLSGRLLKKWH HY
Sbjct: 61 VLYWSWCKPQVEVKSFPAEPIMALASNDEGTYIVGGGLSGDIYLWEVLSGRLLKKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+VFSEDDSLLISGSEDGC+RVW+LLTVFDDGWQREAKHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWALLTVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
VGYGGSN+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIID IALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDVIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAK PS+ DYGLHILGSLSNQSKSVT+LAYC+SGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKCPSTGDYGLHILGSLSNQSKSVTALAYCSSGNLLISGSEDGAIRVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
+IRV +HSKGPVNNI++VRQ+V+PK S+SQG LRKHRSL+PP LAKFENSKDED+DT
Sbjct: 301 VIRVFRHSKGPVNNILLVRQQVLPKS--QSTSQGFLRKHRSLLPPALAKFENSKDEDEDT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++IG +G E MGF + L+ VM+NQI +LQ+QG AA GMELER+K D G+SMQMLQ
Sbjct: 361 GVIIGPTGLPKESMGFPA-LSSHVMDNQITELQQQGSAANGMELERLKYDCGKSMQMLQH 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRKMYDNLH+FCVNEL+DGDQ
Sbjct: 421 WRKMYDNLHQFCVNELLDGDQ 438
BLAST of MS002473 vs. ExPASy Swiss-Prot
Match:
Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)
HSP 1 Score: 508.1 bits (1307), Expect = 1.0e-142
Identity = 254/445 (57.08%), Postives = 327/445 (73.48%), Query Frame = 0
Query: 2 VLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGSI 61
+ V+ASSSID GIG WDL TG EQL++K CASP+HGL VG++FLA SQL T+GSI
Sbjct: 3 ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62
Query: 62 LYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYR 121
YWSW KPQ EVKS+P E I LAANNEGTY+VGGG SGDIYLWEV +G+LLKKWHGHYR
Sbjct: 63 FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122
Query: 122 AVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVV 181
+VTC+VFS DDSLL+SGS+DG +RVWSL+ +FDD +++ LYEH+F H + +TDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182
Query: 182 GYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 241
YGG N++IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242
Query: 242 TAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNNI 301
A+NA +S+YG +LGS+S + K++T LAYCA GNLLISGSEDG + VWD ++
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302
Query: 302 IRVLKHS----KGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDED 361
+R L H+ KGPVNNI IVR+ ++ ++ +Q S + +L+PPPL K+E ED
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVAN---SNKTQVSWKSRGALIPPPLEKYERPV-ED 362
Query: 362 DDTGIVIGVSGEFMG---FSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQM 421
GIV F +SS L+ D+++ Q+ +LQ+QG AAT ME+ER+K +Y RS+QM
Sbjct: 363 TMDGIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQM 422
Query: 422 LQQWRKMYDNLHEFCVNELVDGDQN 440
+QW+K Y+NL + + E G N
Sbjct: 423 NEQWQKNYENLLQVVMEEEQIGGTN 438
BLAST of MS002473 vs. ExPASy Swiss-Prot
Match:
A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 3.0e-41
Identity = 109/338 (32.25%), Postives = 174/338 (51.48%), Query Frame = 0
Query: 3 LVVASSSIDSGIGC--WDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 62
LV+++ + C W+ TG+ L Y+ + GL +G Q+L QL
Sbjct: 7 LVLSADAAGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL-----GKNY 66
Query: 63 ILYWS-WFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGH 122
I W + Q++ K + L+A+ G Y+V G + IYLWEV +G LL + H
Sbjct: 67 INVWELQRRDQLQQKIVCPGPVNCLSASPNGLYLV-AGIAESIYLWEVSTGHLLAILNSH 126
Query: 123 YRAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDI 182
Y+ VTC+ F++D S +ISG++D V VW L +V R + Y ++ H+LPITD+
Sbjct: 127 YQDVTCLTFTDDSSHIISGAKDSLVLVWGLYSVLQVETSRGPEPRY--VWSRHSLPITDV 186
Query: 183 VVGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGK 242
G GG + + +SS+D+T K+W + G LL +++F I ++A DP E+ + GG DG
Sbjct: 187 QCGIGGPQARVATSSLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFCGGSDGV 246
Query: 243 IYTAALNAKSPSSSDYGLHILGSL--SNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTR 302
IY L +P + H + VT L+ G++LISGS D + VWD +
Sbjct: 247 IYQVDLYT-TPEQRERPFHPEQEMVFKGHRNQVTCLSVSLDGSMLISGSHDETVCVWDIQ 306
Query: 303 TNNIIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGS 336
+ +R + H +GPV N+ I+ P ++ + S+ S
Sbjct: 307 SKQSLRSVPH-RGPVTNVFII---AAPSNMLRAESKPS 331
BLAST of MS002473 vs. ExPASy Swiss-Prot
Match:
Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)
HSP 1 Score: 165.2 bits (417), Expect = 1.6e-39
Identity = 105/326 (32.21%), Postives = 168/326 (51.53%), Query Frame = 0
Query: 17 WDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGSILYWSWFKPQVEVKSF 76
W+LH+GA L Y+ + GL + ++L +QL +A + K Q++ K
Sbjct: 23 WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQR----KDQLQQKIM 82
Query: 77 PAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYRAVTCVVFSEDDSLLI 136
+ L A+ G Y++ G + I+LWEV +G LL HY+ V+C+ F+ D S I
Sbjct: 83 CPGPVTCLTASPNGLYVL-AGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFI 142
Query: 137 SGSEDGCVRVWSLLTVFDDGWQR--EAKHLYEHSFTGHNLPITDIVVGYGGSNSIIISSS 196
SG +D V VWSL +V R +H++ H H LPITD+ G+GG + + +SS
Sbjct: 143 SGGKDCLVLVWSLCSVLQADPSRIPAPRHVWSH----HALPITDLHCGFGGPLARVATSS 202
Query: 197 VDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSD 256
+D+T K+W +S G+LL +++F I A+ +D EH + GG +G I+ L P +
Sbjct: 203 LDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FTWPGQRE 262
Query: 257 YGLHILGSLSNQSK----SVTSLAYCASGNLLISGSEDGAIKVWDTRTNNIIRVLKHSKG 316
H K VT L+ G++L+SGS D +++WD ++ IR + KG
Sbjct: 263 RSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVA-LKG 322
Query: 317 PVNNIIIVRQRVIPKPLINSSSQGSL 337
PV N I+ + P +++S + SL
Sbjct: 323 PVTNAAIL---LAPVSMLSSDFRPSL 334
BLAST of MS002473 vs. ExPASy Swiss-Prot
Match:
Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 1.8e-38
Identity = 101/311 (32.48%), Postives = 157/311 (50.48%), Query Frame = 0
Query: 17 WDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGSILYWSW---FKPQVEV 76
W+LH+GA L Y+ + GL + ++L +QL G +W K Q++
Sbjct: 23 WELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL-------GKNYICAWELQRKDQLQQ 82
Query: 77 KSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYRAVTCVVFSEDDS 136
K + L + G Y++ G S +IYLWEV +G LL HY+ V+C+ F+ D S
Sbjct: 83 KIMCPGPVTCLTTSPNGLYVL-AGISENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSS 142
Query: 137 LLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVVGYGGSNSIIISS 196
ISG +D V WSL +V R H ++ H LPITD+ G+GG + + ++
Sbjct: 143 HFISGGKDCLVLAWSLCSVLQADPSRTPAP--RHVWSRHTLPITDLHCGFGGPLARVATA 202
Query: 197 SVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL------NA 256
S+D+T K+W +S G+LL +++F I A+ +D EH + GG DG I+ L
Sbjct: 203 SLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTWPGQRE 262
Query: 257 KSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNNIIRVLKH 316
KS + NQ VT L+ G++L+SGS D +++WD ++ +R +
Sbjct: 263 KSFQPEQEHGKVFRGHRNQ---VTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTVT- 319
Query: 317 SKGPVNNIIIV 319
KGPV N I+
Sbjct: 323 LKGPVTNACIM 319
BLAST of MS002473 vs. ExPASy Swiss-Prot
Match:
Q68EI0 (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 1.5e-37
Identity = 123/446 (27.58%), Postives = 208/446 (46.64%), Query Frame = 0
Query: 3 LVVASSSIDSGIGC--WDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 62
+V+++ S C +D HTG+E L Y+ + S L + +++ +QL
Sbjct: 7 VVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQLGKNYINVWE 66
Query: 63 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 122
I K Q++ K + L A+ +G Y++ G + IYLWEV +G LL H+
Sbjct: 67 IQR----KDQLQQKIVCPGIVTCLCASPDGLYVL-AGIAEAIYLWEVSTGNLLAILSRHF 126
Query: 123 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTV--FDDGWQREAKHLYEHSFTGHNLPITD 182
+ ++C+ F++D S +SG +D +W+L +V D E +H+ + H+LPITD
Sbjct: 127 QDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVVQLDSSRTPEPRHI----LSRHSLPITD 186
Query: 183 IVVGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDG 242
I G G + + ++S+D+T KVW +S G++L +++F I ++ DP E+ + GG DG
Sbjct: 187 IHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDG 246
Query: 243 KIYTAALNAKSPS------SSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIK 302
I+ +L + S S S G + N VT L+ G +L+SGS D ++
Sbjct: 247 NIFQVSLCSTSLSRDKTFQSDSEGNQVFKGHRN---LVTCLSVSMDGTVLLSGSNDETVR 306
Query: 303 VWDTRTNNIIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFEN 362
+WD ++ I + H +GPV N I IP P S H ++ P ++ N
Sbjct: 307 MWDVQSKQCIWTINH-RGPVTNAAI-----IPAPANMFLSD----SHPAVPLPRFSRHLN 366
Query: 363 SKDEDDDTGIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQG------CAATGMEL----E 422
++ D TG G S L + E + L+K CA T + E
Sbjct: 367 PSEQGDGTGT--------GGMSLRLGANTQEPEGTYLEKAEELYSLMCAVTDKSVFGDGE 422
Query: 423 RVKRDYGRSMQMLQQWRKMYDNLHEF 429
K + ++ +K+ +L+EF
Sbjct: 427 NTKVRVSELEEEVRTLKKINKDLYEF 422
BLAST of MS002473 vs. ExPASy TrEMBL
Match:
A0A6J1DDG0 (protein ROOT INITIATION DEFECTIVE 3-like OS=Momordica charantia OX=3673 GN=LOC111019080 PE=4 SV=1)
HSP 1 Score: 902.1 bits (2330), Expect = 9.0e-259
Identity = 439/441 (99.55%), Postives = 441/441 (100.00%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS
Sbjct: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY
Sbjct: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV
Sbjct: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSI+DAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIVDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDED+DT
Sbjct: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDEDT 360
Query: 361 GIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQWRK 420
GIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQWRK
Sbjct: 361 GIVIGVSGEFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQWRK 420
Query: 421 MYDNLHEFCVNELVDGDQNTR 442
MYDNLHEFCVNELVDGDQNTR
Sbjct: 421 MYDNLHEFCVNELVDGDQNTR 441
BLAST of MS002473 vs. ExPASy TrEMBL
Match:
A0A6J1FMG7 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC111446741 PE=4 SV=1)
HSP 1 Score: 801.6 bits (2069), Expect = 1.7e-228
Identity = 382/441 (86.62%), Postives = 419/441 (95.01%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSS+DSGIGCWDLHTGAEQLRYKSCASP+HGL+CVG++FLACSQLRDPAAT+GS
Sbjct: 1 MVLVVASSSVDSGIGCWDLHTGAEQLRYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSWFKPQVEVKSFPAE IM LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWH HY
Sbjct: 61 VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+VFSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
+GYGGSN+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYC+SGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNN++IVRQ+++P +N +SQGSLRKHRSL+PP LAKF NSKD+D+DT
Sbjct: 301 IIRVLKHSKGPVNNLLIVRQQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++IG SG E MGF SP++ VM+NQI +LQ+QG AATGMELER+KRDYG+SMQM QQ
Sbjct: 361 GVIIGRSGPPMESMGF-SPISSHVMDNQITELQQQGSAATGMELERLKRDYGKSMQMQQQ 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRK+YDNLH++CVNEL+DGDQ
Sbjct: 421 WRKLYDNLHQYCVNELLDGDQ 440
BLAST of MS002473 vs. ExPASy TrEMBL
Match:
A0A6J1IYT8 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 PE=4 SV=1)
HSP 1 Score: 789.3 bits (2037), Expect = 8.5e-225
Identity = 376/441 (85.26%), Postives = 416/441 (94.33%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVLVVASSS+DSGIGCWDLHTGAEQL YKSCASP+HGL+CVG++FLACSQLRDPAAT+GS
Sbjct: 1 MVLVVASSSVDSGIGCWDLHTGAEQLCYKSCASPAHGLVCVGERFLACSQLRDPAATSGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSWFKPQVEVKSFPAE IM LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWH HY
Sbjct: 61 VLYWSWFKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLMKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+ FSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLEFSEDDSLLISGSEDGCVRVWSLLKVFDDGWQRESKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
+GYGGSN+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 IGYGGSNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYC+SGNLLISGSEDGAIKVWDTRTNN
Sbjct: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGSEDGAIKVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
IIRVLKHSKGPVNN++IV+ +++P +N +SQGSLRKHRSL+PP LAKF NSKD+D+DT
Sbjct: 301 IIRVLKHSKGPVNNLLIVQHQLLPTSQLNPTSQGSLRKHRSLLPPALAKFGNSKDDDEDT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++IG SG E MGF SP++ VM++QI +LQ+QG AATGMELER+KR+YG+SMQM QQ
Sbjct: 361 GVIIGRSGPPMESMGF-SPISSHVMDHQITELQQQGSAATGMELERLKREYGKSMQMQQQ 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRK+YDNLH++CVNEL+DGDQ
Sbjct: 421 WRKLYDNLHQYCVNELLDGDQ 440
BLAST of MS002473 vs. ExPASy TrEMBL
Match:
A0A0A0KZT0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639920 PE=4 SV=1)
HSP 1 Score: 769.6 bits (1986), Expect = 7.0e-219
Identity = 370/441 (83.90%), Postives = 409/441 (92.74%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVL+VASSSIDSGIGCWDLHTG+EQLRYKSCASP HGL+CVG++FLACSQLRDPAATAGS
Sbjct: 1 MVLLVASSSIDSGIGCWDLHTGSEQLRYKSCASPPHGLVCVGRKFLACSQLRDPAATAGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSW KPQVEVKSFPAE IM LA+N+EGTYIVGGGFSGDIYLWEVLSGRLLKKWH HY
Sbjct: 61 VLYWSWSKPQVEVKSFPAEPIMALASNHEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+VFSEDDSLL+SGSEDGC+RVWSL+TVFDDGWQREAKHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLVFSEDDSLLVSGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
VGYGG N+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAK PSSSDYGLHILGS+SNQSKSVTSLAYC+SGNLLISGSEDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
+IRV +HSKGPVNNI++V+Q+ +PK S+SQGSLRKHR L+PP LAKFENSKDED+ T
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKS--QSTSQGSLRKHRPLLPPALAKFENSKDEDEYT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++I SG E GFS L+ VM++QI +LQ+QG AATGMELER+K DYG+S QMLQ
Sbjct: 361 GVIIDPSGPPKESTGFSF-LSSHVMDDQITELQQQGSAATGMELERLKHDYGKSKQMLQH 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRKMYDNLH+FCVNEL+DG+Q
Sbjct: 421 WRKMYDNLHQFCVNELLDGNQ 438
BLAST of MS002473 vs. ExPASy TrEMBL
Match:
A0A1S3BU36 (protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4 SV=1)
HSP 1 Score: 766.1 bits (1977), Expect = 7.7e-218
Identity = 371/441 (84.13%), Postives = 406/441 (92.06%), Query Frame = 0
Query: 1 MVLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGS 60
MVL+VASSSIDSGIGCWDLHTGAEQLRYKSCASP HGL+CVG++FLACSQLRD AATAGS
Sbjct: 1 MVLLVASSSIDSGIGCWDLHTGAEQLRYKSCASPPHGLVCVGEKFLACSQLRDAAATAGS 60
Query: 61 ILYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHY 120
+LYWSW KPQVEVKSFPAE IM LA+NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWH HY
Sbjct: 61 VLYWSWCKPQVEVKSFPAEPIMALASNNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHY 120
Query: 121 RAVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIV 180
RAVTC+VFSEDDSLLISGSEDGC+RVWSL+TVFDDGWQREAKHLYEHSFTGHNLP+TDIV
Sbjct: 121 RAVTCLVFSEDDSLLISGSEDGCIRVWSLITVFDDGWQREAKHLYEHSFTGHNLPVTDIV 180
Query: 181 VGYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
VGYGG N+IIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI
Sbjct: 181 VGYGGFNAIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKI 240
Query: 241 YTAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNN 300
YTAALNAK PSSSDYGLHILGSLSNQSKSVTSLAYC+SGNLLISG EDGAI+VWDTRTNN
Sbjct: 241 YTAALNAKCPSSSDYGLHILGSLSNQSKSVTSLAYCSSGNLLISGYEDGAIRVWDTRTNN 300
Query: 301 IIRVLKHSKGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDEDDDT 360
+IRV +HSKGPVNNI++V+Q+ +PK S+SQGSLRKHR ++PP LAKFENSKDED+ T
Sbjct: 301 VIRVFRHSKGPVNNILLVQQQPLPKS--QSTSQGSLRKHRPILPPALAKFENSKDEDEYT 360
Query: 361 GIVIGVSG---EFMGFSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQMLQQ 420
G++I SG E M FS L+ VM+NQI +LQ+QG AAT MELER+K DYG+S QMLQ
Sbjct: 361 GVIIDPSGPPKESMEFSF-LSSHVMDNQITELQQQGSAATEMELERLKHDYGKSKQMLQH 420
Query: 421 WRKMYDNLHEFCVNELVDGDQ 439
WRKMYDNLH+FCVNEL+DG+Q
Sbjct: 421 WRKMYDNLHQFCVNELLDGNQ 438
BLAST of MS002473 vs. TAIR 10
Match:
AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 508.1 bits (1307), Expect = 7.3e-144
Identity = 254/445 (57.08%), Postives = 327/445 (73.48%), Query Frame = 0
Query: 2 VLVVASSSIDSGIGCWDLHTGAEQLRYKSCASPSHGLICVGQQFLACSQLRDPAATAGSI 61
+ V+ASSSID GIG WDL TG EQL++K CASP+HGL VG++FLA SQL T+GSI
Sbjct: 3 ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQL-SARNTSGSI 62
Query: 62 LYWSWFKPQVEVKSFPAEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYR 121
YWSW KPQ EVKS+P E I LAANNEGTY+VGGG SGDIYLWEV +G+LLKKWHGHYR
Sbjct: 63 FYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYR 122
Query: 122 AVTCVVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVV 181
+VTC+VFS DDSLL+SGS+DG +RVWSL+ +FDD +++ LYEH+F H + +TDIV+
Sbjct: 123 SVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVI 182
Query: 182 GYGGSNSIIISSSVDRTCKVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIY 241
YGG N++IISSS DRTCKVWSLS+GKLL+NIIFPS+I+A+ALDPG VFY G RD KIY
Sbjct: 183 DYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY 242
Query: 242 TAALNAKSPSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNNI 301
A+NA +S+YG +LGS+S + K++T LAYCA GNLLISGSEDG + VWD ++
Sbjct: 243 IGAINA----TSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRH 302
Query: 302 IRVLKHS----KGPVNNIIIVRQRVIPKPLINSSSQGSLRKHRSLVPPPLAKFENSKDED 361
+R L H+ KGPVNNI IVR+ ++ ++ +Q S + +L+PPPL K+E ED
Sbjct: 303 VRTLIHAKGSRKGPVNNIQIVRKTIVAN---SNKTQVSWKSRGALIPPPLEKYERPV-ED 362
Query: 362 DDTGIVIGVSGEFMG---FSSPLTCDVMENQIAQLQKQGCAATGMELERVKRDYGRSMQM 421
GIV F +SS L+ D+++ Q+ +LQ+QG AAT ME+ER+K +Y RS+QM
Sbjct: 363 TMDGIVTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQGSAATEMEMERLKLEYKRSLQM 422
Query: 422 LQQWRKMYDNLHEFCVNELVDGDQN 440
+QW+K Y+NL + + E G N
Sbjct: 423 NEQWQKNYENLLQVVMEEEQIGGTN 438
BLAST of MS002473 vs. TAIR 10
Match:
AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 82.8 bits (203), Expect = 7.6e-16
Identity = 64/260 (24.62%), Postives = 111/260 (42.69%), Query Frame = 0
Query: 81 IMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYRAVTCVVFSEDDSLLISGSE 140
I +A +++ +IV + LW+V +G L+K GH CV F+ ++++SGS
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 141 DGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVVGYGGSNSIIISSSVDRTCK 200
D VR+W + T K L H+ P+T V + S+I+SSS D C+
Sbjct: 134 DETVRIWDVTT---------GKCL--KVLPAHSDPVT--AVDFNRDGSLIVSSSYDGLCR 193
Query: 201 VWSLSKGKLLRNIIFPS--IIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLH 260
+W G ++ +I + + P G D L + SS+ +
Sbjct: 194 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDN-----TLRLWNISSAKFLKT 253
Query: 261 ILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNNIIRVLKHSKGPVNNIIIV 320
G + N ++S +G ++SGSED + +W+ + +++ L+ V N+
Sbjct: 254 YTGHV-NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC- 307
Query: 321 RQRVIPKPLINSSSQGSLRK 339
P N + GSL K
Sbjct: 314 ------HPTENLIASGSLDK 307
BLAST of MS002473 vs. TAIR 10
Match:
AT3G18130.1 (receptor for activated C kinase 1C )
HSP 1 Score: 82.4 bits (202), Expect = 9.9e-16
Identity = 55/221 (24.89%), Postives = 109/221 (49.32%), Query Frame = 0
Query: 87 NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYRAVTCVVFSEDDSLLISGSEDGCVRV 146
+++G + + G + G++ LW++ +G +++ GH + V V FS D+ ++S S D +++
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 147 WSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVVGYGGSNSIIISSSVDRTCKVWSLSK 206
W+ L E K+ GH ++ + I+S+S D+T KVW+L
Sbjct: 132 WNTL--------GECKYTISEG-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 191
Query: 207 GKLLRNIIFPS-IIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSSDYGLHILGSLSN 266
KL +++ S ++ +A+ P + GG+DG I L + Y L GS+
Sbjct: 192 CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL---AEGKKLYSLE-AGSI-- 251
Query: 267 QSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNNIIRVLK 307
+ SL + + L + +E+ +I++WD + +++ LK
Sbjct: 252 ----IHSLCFSPNRYWLCAATEN-SIRIWDLESKSVVEDLK 272
BLAST of MS002473 vs. TAIR 10
Match:
AT1G48630.1 (receptor for activated C kinase 1B )
HSP 1 Score: 79.3 bits (194), Expect = 8.4e-15
Identity = 66/265 (24.91%), Postives = 111/265 (41.89%), Query Frame = 0
Query: 81 IMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHGHYRAVTCVVFSEDDSLLISGSE 140
+ + +++G + + G + G++ LW++ +G +++ GH + V V FS D+ ++S S
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 141 DGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVVGYGGSNSIIISSSVDRTCK 200
D +++W+ L E K+ + GH ++ + I+S+S D+T K
Sbjct: 126 DRTIKLWNTL--------GECKYTISEA-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 185
Query: 201 VWSLSKGKLLRNIIFPS-IIDAIALDPGEHVFYGGGRDGKIYTAAL-NAKSPSSSDYG-- 260
VW+L KL + S ++ +A+ P + GG+DG I L K S + G
Sbjct: 186 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI 245
Query: 261 LHILGSLSN-----------------QSKSV----------------------------- 295
+H L N +SKSV
Sbjct: 246 IHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIY 305
BLAST of MS002473 vs. TAIR 10
Match:
AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 79.3 bits (194), Expect = 8.4e-15
Identity = 59/237 (24.89%), Postives = 103/237 (43.46%), Query Frame = 0
Query: 78 AEAIMPLAANNEGTYIVGGGFSGDIYLWEVLSG-RLLKKWHGHYRAVTCVVFSEDDSLLI 137
+ I LA +++ Y + +W+ S LK GH V CV F+ +L++
Sbjct: 85 SSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIV 144
Query: 138 SGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDIVVGYGGSNSIIISSSVD 197
SGS D +R+W + T H++PI+ V + S+I+S+S D
Sbjct: 145 SGSFDETIRIWEVKT-----------GKCVRMIKAHSMPISS--VHFNRDGSLIVSASHD 204
Query: 198 RTCKVWSLSKGKLLRNII---FPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSPSSS 257
+CK+W +G L+ +I P++ F +GK A + S
Sbjct: 205 GSCKIWDAKEGTCLKTLIDDKSPAV-----------SFAKFSPNGKFILVATLDSTLKLS 264
Query: 258 DYG----LHILGSLSNQSKSVTSLAYCASGNLLISGSEDGAIKVWDTRTNNIIRVLK 307
+Y L + +N+ +TS +G ++SGSED + +WD + NI++ L+
Sbjct: 265 NYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE 297
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022151059.1 | 1.9e-258 | 99.55 | protein ROOT INITIATION DEFECTIVE 3-like [Momordica charantia] >XP_022151066.1 p... | [more] |
XP_022941447.1 | 3.4e-228 | 86.62 | protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata] >KAG6608496.1 Protein R... | [more] |
XP_023521513.1 | 1.0e-227 | 85.94 | protein ROOT INITIATION DEFECTIVE 3 [Cucurbita pepo subsp. pepo] | [more] |
XP_022982251.1 | 1.8e-224 | 85.26 | protein ROOT INITIATION DEFECTIVE 3 [Cucurbita maxima] | [more] |
XP_038898957.1 | 3.1e-221 | 84.81 | protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9M3B4 | 1.0e-142 | 57.08 | Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1... | [more] |
A0A1L8HX76 | 3.0e-41 | 32.25 | WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1 | [more] |
Q9BV38 | 1.6e-39 | 32.21 | WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2 | [more] |
Q3SZD4 | 1.8e-38 | 32.48 | WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1 | [more] |
Q68EI0 | 1.5e-37 | 27.58 | WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DDG0 | 9.0e-259 | 99.55 | protein ROOT INITIATION DEFECTIVE 3-like OS=Momordica charantia OX=3673 GN=LOC11... | [more] |
A0A6J1FMG7 | 1.7e-228 | 86.62 | protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC11144674... | [more] |
A0A6J1IYT8 | 8.5e-225 | 85.26 | protein ROOT INITIATION DEFECTIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111481134 ... | [more] |
A0A0A0KZT0 | 7.0e-219 | 83.90 | WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G... | [more] |
A0A1S3BU36 | 7.7e-218 | 84.13 | protein ROOT INITIATION DEFECTIVE 3 OS=Cucumis melo OX=3656 GN=LOC103493552 PE=4... | [more] |