MS002471 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGCAGCTTAGCCTCAGCAGCAACTATTCCGAAGCTTAATCGTGCTGGATCTGTTCTTGTGCGCAGCCCATGGAGCTCTAGGGTTTTTGTCTCTGTCAGACCAAGACATGTTTGTTTCTTATCTTTATCACATGTTTTTATGATTCTGAGGTTTAACTTTTGAAAAGGGTTTCAAAAAATAAGGTAGTCTTTTGTTACCTTGAAGATTCGGTTTTTTGTCAAACTCAAATTTGTTTATGGATAGCAGAGGTTGTTCATGAGTTCGGTTGGGTTGAAGTACTTTAAACCTAAACTCATTTGATTGGAGTTTATTAAATAATGAACTCAGTCCAACCCAACCGTAAAAAATATTTTGATTGAGTTTGGGCTGTTTTGCTCGTCACCAATAAAAAAAAAAGTTTTAAGATTAGTAATAAATTTGGGTCGATTCGATTGAAGTCAAATTTATTTTTATTTTTGGTAACCCTATTGATCCAAACCAACTGAATTTATAGAGTTTTGATTTATTTAAATCTAAACAAATCTATAACCCAATCCAAGTAGTATGTTTGAACTGAAATTGACATGATCTAGCCATAACACTATAATTTCTACCCATTTAAATTTGAATTTTCCATCTTGTATTGCTTTTTTTCTTCTTTTTTAACTCATTAACTTAACTGTTGGATGATGGTTTAGTTACTATAATATGCCTTTCATTTAAGTTCTCTCTGCTCATTCCTATCATATATCAATTTGATTTTAGAAAAAAGGAAAACAAATCTTAATTTTGTAAAATAAATAATAATAAGTTTGATATAATATTACTGTGAATGGAAATAGGCAAGTTCTTCACAGTTTGCTGCAGCAGCAGCAGCTGATGGAGCGGCTCAGGGTGTGAAGCGAGCCACAGAGAAGGCTGCCGAAGAAGTCAAAGATAAGGCTTCCTCTGCCGCCGAAGAGGTTCTTTCAAAACTATTTCATCATTAAACTTTCTACTCTAAAGATTCCTATTCAAAGATCAGCCTTTTGTCAATGTGTTTTGATATAGAGAAAAATGGGATGATGCAGGTGACTCAGAAAACAAAGGAAGTTGCAGGGAAAGTGAGTGAAACAGCACAGGATTTGGCTGGGAAGGCAAAGCAAACAGTTCAAGAAGCATGGGGATCTGTGAAGGATACAACTCAGAACATCAAAGAGAAGGTTGTTGGCAAAGCTGAGGAATCCAAAGAAGCCATTAAAGACACTGCAGACAACATCAAAGACAAAATCAAGTCAAACTGT ATGGCGAGCAGCTTAGCCTCAGCAGCAACTATTCCGAAGCTTAATCGTGCTGGATCTGTTCTTGTGCGCAGCCCATGGAGCTCTAGGGTTTTTGTCTCTGTCAGACCAAGACATGCAAGTTCTTCACAGTTTGCTGCAGCAGCAGCAGCTGATGGAGCGGCTCAGGGTGTGAAGCGAGCCACAGAGAAGGCTGCCGAAGAAGTCAAAGATAAGGCTTCCTCTGCCGCCGAAGAGGTGACTCAGAAAACAAAGGAAGTTGCAGGGAAAGTGAGTGAAACAGCACAGGATTTGGCTGGGAAGGCAAAGCAAACAGTTCAAGAAGCATGGGGATCTGTGAAGGATACAACTCAGAACATCAAAGAGAAGGTTGTTGGCAAAGCTGAGGAATCCAAAGAAGCCATTAAAGACACTGCAGACAACATCAAAGACAAAATCAAGTCAAACTGT ATGGCGAGCAGCTTAGCCTCAGCAGCAACTATTCCGAAGCTTAATCGTGCTGGATCTGTTCTTGTGCGCAGCCCATGGAGCTCTAGGGTTTTTGTCTCTGTCAGACCAAGACATGCAAGTTCTTCACAGTTTGCTGCAGCAGCAGCAGCTGATGGAGCGGCTCAGGGTGTGAAGCGAGCCACAGAGAAGGCTGCCGAAGAAGTCAAAGATAAGGCTTCCTCTGCCGCCGAAGAGGTGACTCAGAAAACAAAGGAAGTTGCAGGGAAAGTGAGTGAAACAGCACAGGATTTGGCTGGGAAGGCAAAGCAAACAGTTCAAGAAGCATGGGGATCTGTGAAGGATACAACTCAGAACATCAAAGAGAAGGTTGTTGGCAAAGCTGAGGAATCCAAAGAAGCCATTAAAGACACTGCAGACAACATCAAAGACAAAATCAAGTCAAACTGT MASSLASAATIPKLNRAGSVLVRSPWSSRVFVSVRPRHASSSQFAAAAAADGAAQGVKRATEKAAEEVKDKASSAAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQNIKEKVVGKAEESKEAIKDTADNIKDKIKSNC Homology
BLAST of MS002471 vs. NCBI nr
Match: XP_022152517.1 (uncharacterized protein At4g13230 [Momordica charantia]) HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS002471 vs. NCBI nr
Match: XP_008457975.1 (PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51 Identity = 121/149 (81.21%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MS002471 vs. NCBI nr
Match: XP_038897424.1 (uncharacterized protein At4g13230 [Benincasa hispida]) HSP 1 Score: 212.2 bits (539), Expect = 3.0e-51 Identity = 124/149 (83.22%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MS002471 vs. NCBI nr
Match: XP_011659168.1 (uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical protein Csa_016428 [Cucumis sativus]) HSP 1 Score: 204.1 bits (518), Expect = 8.2e-49 Identity = 118/149 (79.19%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of MS002471 vs. NCBI nr
Match: GAV70662.1 (hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis]) HSP 1 Score: 131.0 bits (328), Expect = 8.8e-27 Identity = 80/134 (59.70%), Postives = 102/134 (76.12%), Query Frame = 0
BLAST of MS002471 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.0e-09 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of MS002471 vs. ExPASy TrEMBL
Match: A0A6J1DGG7 (uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 5.1e-65 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS002471 vs. ExPASy TrEMBL
Match: A0A1S3C7D4 (uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.5e-52 Identity = 121/149 (81.21%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MS002471 vs. ExPASy TrEMBL
Match: A0A0A0K9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 4.0e-49 Identity = 118/149 (79.19%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of MS002471 vs. ExPASy TrEMBL
Match: A0A5B7AK94 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_024954 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27 Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 0
BLAST of MS002471 vs. ExPASy TrEMBL
Match: A0A1Q3BS03 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14160 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.3e-27 Identity = 80/134 (59.70%), Postives = 102/134 (76.12%), Query Frame = 0
BLAST of MS002471 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 62.4 bits (150), Expect = 3.6e-10 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of MS002471 vs. TAIR 10
Match: AT1G04670.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.9e-04 Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 0
BLAST of MS002471 vs. TAIR 10
Match: AT4G21020.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 42.4 bits (98), Expect = 3.8e-04 Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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