MS002451 (gene) Bitter gourd (TR) v1

Overview


Name	MS002451
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold318: 146049 .. 146204 (+)
RNA-Seq Expression	MS002451
Synteny	MS002451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCATCAGTGTTTGGACTGTCCTCTGGTGCAGTAATTGTGAAATGGTCGAAGGTAACGTTATTGCAGCCTATGACATTGACATGGAAATTCTTGCTGTTCAATGAAGTTATACCCTTCACGATTGAGTTGTTAACGAAGTTGAACCTAAAACTC

mRNA sequence

ATTCCATCAGTGTTTGGACTGTCCTCTGGTGCAGTAATTGTGAAATGGTCGAAGGTAACGTTATTGCAGCCTATGACATTGACATGGAAATTCTTGCTGTTCAATGAAGTTATACCCTTCACGATTGAGTTGTTAACGAAGTTGAACCTAAAACTC

Coding sequence (CDS)

ATTCCATCAGTGTTTGGACTGTCCTCTGGTGCAGTAATTGTGAAATGGTCGAAGGTAACGTTATTGCAGCCTATGACATTGACATGGAAATTCTTGCTGTTCAATGAAGTTATACCCTTCACGATTGAGTTGTTAACGAAGTTGAACCTAAAACTC

Protein sequence

IPSVFGLSSGAVIVKWSKVTLLQPMTLTWKFLLFNEVIPFTIELLTKLNLKL

Homology

[Close]

BLAST of MS002451 vs. NCBI nr
Match: KAE8645717.1 (hypothetical protein Csa_020484 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-04
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 1   IPSVFGLSSGAVIVKWSKVTLLQPMTLTWKFLLFNEVIPFTIELLTKLNLKL 53
           IPSVFG SSGA+++    V    P  LTWKFLL N+VI  TIEL+ K NLKL
Sbjct: 52  IPSVFGRSSGAIMLTPWNVRFFHPRMLTWKFLLSNDVILLTIELVMKSNLKL 103

[Close]

BLAST of MS002451 vs. ExPASy TrEMBL
Match: A0A0A0K1V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G035440 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-04
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 1   IPSVFGLSSGAVIVKWSKVTLLQPMTLTWKFLLFNEVIPFTIELLTKLNLKL 53
           IPSVFG SSGA+++    V    P  LTWKFLL N+VI  TIEL+ K NLKL
Sbjct: 52  IPSVFGRSSGAIMLTPWNVRFFHPRMLTWKFLLSNDVILLTIELVMKSNLKL 103

The following BLAST results are available for this feature:

BLAST of MS002451 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645717.1	2.1e-04	59.62	hypothetical protein Csa_020484 [Cucumis sativus]	[more]

BLAST of MS002451 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1V8	1.0e-04	59.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G035440 PE=4 SV=1	[more]

BLAST of MS002451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002451.1	MS002451.1	mRNA