MS002431 (gene) Bitter gourd (TR) v1

Overview


Name	MS002431
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RPM1-interacting protein 4-like
Location	scaffold318: 30071 .. 31398 (-)
RNA-Seq Expression	MS002431
Synteny	MS002431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCAGCAACGGTCACATGTACCACCGTTTGGTAACTGGGAAAACGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCCAGAAAAGGCCGAGGCGGCGGGCCAATCAGAAACCCGAACGATCCCGAAGAATATCCCGACATGTTCTCCGACAACTCACATTCCCATGAGCCTCCTCCTTCCATGCCCATGCCTAAAGATGACCCTCAAACACTTAAACCTACACCTACAGCTCATGAGAGGAGACGGAGCCGGGAAGATGGTGCCTTCCGACAACCCTATGCCAACTCCCCCGGCCACCGTGAGAATCCTGGCCGGAGACAGAGTGGCTCTGAGTACAGCATTGACCGCTCTCCTCTCCACCGTCATGCGAAACCTACCGGTCGAGAAAGCCCAGTCGCGGAGGGCAGGAGCCTCGATGGGGGCCATGGCAACCGTGGGAAGACTAGAATGAAGCCGGTTTTACGCGATGATGCTGTAAGTCTTAAGTTTCTTACCTTTTATTTGTCGAACGATTTACTTCGATGTCTTGTCTAGTTGAACTGAATGTCTAGGATAAAATTTTAATAGAGAAATAAAGATGATCTAAGAGACGAAAGTTTTTAATTATTCCTTTAAACTTCTAAATATTGGTAGAAATCATGAGACCTTCATTTTCCTCTAAATTTTCGTTATTATGTGGTGTAAAGTTCATCTTCGCTCAATTACCAATAATGAGAGACTAAATTGAAACTTTCTAAACTTTCACATATTCCCTAGAGAAAAATTGAAAAAACACCCAAACATCGTATTAAAAATGACATATTAGTGATATAGGAAAGATAAATTGTCATATTTGCAACTATGACAGCTCGTTCCTACCCTATAATTTCCTAGTTTAGAATTTTAGAAACGAAAAAATGAAATAATATGCTAAAAATTTAGATTCAATTATAAGATTGATTCTTAAAATATCTAATAAATTCTCAAGTTTTAATTTTGTGTCTAATATATCTTGTCATATAAAATGGAAAGCTTTTAACCACTCTTAAGAATCGATTCAACTCATGTTAGGAACTTGTACTAGTAGTCATATATATTATAAACCTTTATTAAGTTAAGTCTCTTATCTTGGATCCTTTAACATGGTTCAGCCAGAAGGGACGGCGGTGCCGAAGTTCGGGTCGTGGGATGTGAATAATCCAGCATCGGCCGACGGTTTTACGCACATTTTCGGGAAAGTTCGAGAGGAAAGGATAGGCCCTGGAACACCACCTGTTGTGCATTCTTCTTCACCTTACAACAATGTTCATAACCAAAAAACCGACCACAATGCTAAGGTAAAC

mRNA sequence

CAGCAGCAACGGTCACATGTACCACCGTTTGGTAACTGGGAAAACGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCCAGAAAAGGCCGAGGCGGCGGGCCAATCAGAAACCCGAACGATCCCGAAGAATATCCCGACATGTTCTCCGACAACTCACATTCCCATGAGCCTCCTCCTTCCATGCCCATGCCTAAAGATGACCCTCAAACACTTAAACCTACACCTACAGCTCATGAGAGGAGACGGAGCCGGGAAGATGGTGCCTTCCGACAACCCTATGCCAACTCCCCCGGCCACCGTGAGAATCCTGGCCGGAGACAGAGTGGCTCTGAGTACAGCATTGACCGCTCTCCTCTCCACCGTCATGCGAAACCTACCGGTCGAGAAAGCCCAGTCGCGGAGGGCAGGAGCCTCGATGGGGGCCATGGCAACCGTGGGAAGACTAGAATGAAGCCGCCAGAAGGGACGGCGGTGCCGAAGTTCGGGTCGTGGGATGTGAATAATCCAGCATCGGCCGACGGTTTTACGCACATTTTCGGGAAAGTTCGAGAGGAAAGGATAGGCCCTGGAACACCACCTGTTGTGCATTCTTCTTCACCTTACAACAATGTTCATAACCAAAAAACCGACCACAATGCTAAGGTAAAC

Coding sequence (CDS)

CAGCAGCAACGGTCACATGTACCACCGTTTGGTAACTGGGAAAACGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCCAGAAAAGGCCGAGGCGGCGGGCCAATCAGAAACCCGAACGATCCCGAAGAATATCCCGACATGTTCTCCGACAACTCACATTCCCATGAGCCTCCTCCTTCCATGCCCATGCCTAAAGATGACCCTCAAACACTTAAACCTACACCTACAGCTCATGAGAGGAGACGGAGCCGGGAAGATGGTGCCTTCCGACAACCCTATGCCAACTCCCCCGGCCACCGTGAGAATCCTGGCCGGAGACAGAGTGGCTCTGAGTACAGCATTGACCGCTCTCCTCTCCACCGTCATGCGAAACCTACCGGTCGAGAAAGCCCAGTCGCGGAGGGCAGGAGCCTCGATGGGGGCCATGGCAACCGTGGGAAGACTAGAATGAAGCCGCCAGAAGGGACGGCGGTGCCGAAGTTCGGGTCGTGGGATGTGAATAATCCAGCATCGGCCGACGGTTTTACGCACATTTTCGGGAAAGTTCGAGAGGAAAGGATAGGCCCTGGAACACCACCTGTTGTGCATTCTTCTTCACCTTACAACAATGTTCATAACCAAAAAACCGACCACAATGCTAAGGTAAAC

Protein sequence

QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEPPPSMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPLHRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKVN

Homology

[Close]

BLAST of MS002431 vs. NCBI nr
Match: XP_022145992.1 (RPM1-interacting protein 4-like [Momordica charantia])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 212/222 (95.50%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEPP 60
           QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+FSDNSHSHEPP
Sbjct: 3   QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEPP 62

Query: 61  PSMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSP 120
           PSMPMPKDDPQTLKPTPTAHERRRSREDGA RQPYANSPGHRENPGRRQSGSEYSIDRSP
Sbjct: 63  PSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSP 122

Query: 121 LHRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP------PEGTAVPKFGSWDVNNPASA 180
           LHRHAKPTGRESPVAEG+SLDGGHGNRGKTRMKP      PEGTAVPKFG WDVNNPASA
Sbjct: 123 LHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGXWDVNNPASA 182

Query: 181 DGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           DGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK
Sbjct: 183 DGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 224

[Close]

BLAST of MS002431 vs. NCBI nr
Match: KAG6575990.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.6 bits (893), Expect = 3.9e-92
Identity = 171/217 (78.80%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEP-PP 62
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP+MF+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 63  SMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPL 122
           ++P PK         PT HE+++SRED  +  PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDDGY-HPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 123 HRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP--PEGTAVPKFGSWDVNNPASADGFTH 182
           HRHAKP+GRESPV EG+ LDGGHGNRGKTRMKP  PEGTAVPKFGSWDVNNPASADGFTH
Sbjct: 123 HRHAKPSGRESPVVEGKGLDGGHGNRGKTRMKPDAPEGTAVPKFGSWDVNNPASADGFTH 182

Query: 183 IFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           IFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AK
Sbjct: 183 IFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAK 209

[Close]

BLAST of MS002431 vs. NCBI nr
Match: XP_023547760.1 (RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92
Identity = 171/217 (78.80%), Postives = 186/217 (85.71%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEP-PP 62
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP+MF+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 63  SMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPL 122
           ++P PK         PT HE+++SRED  F  PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  TIPAPK---------PTTHEKKQSREDDGF-HPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 123 HRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP--PEGTAVPKFGSWDVNNPASADGFTH 182
           HRHAKP+GRESPV EG+  DGGHGNRGKTRMKP  PEGTAVPKFGSWDVNNPASADGFTH
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKPDAPEGTAVPKFGSWDVNNPASADGFTH 182

Query: 183 IFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           IFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AK
Sbjct: 183 IFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAK 209

[Close]

BLAST of MS002431 vs. NCBI nr
Match: XP_022953250.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022991999.1 RPM1-interacting protein 4-like [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 170/217 (78.34%), Postives = 186/217 (85.71%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEP-PP 62
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP+MF+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 63  SMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPL 122
           ++P PK         PT HE+++SRED  +  PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDDGY-HPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 123 HRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP--PEGTAVPKFGSWDVNNPASADGFTH 182
           HRHAKP+GRESPV EG+  DGGHGNRGKTRMKP  PEGTAVPKFGSWDVNNPASADGFTH
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKPDAPEGTAVPKFGSWDVNNPASADGFTH 182

Query: 183 IFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           IFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AK
Sbjct: 183 IFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAK 209

[Close]

BLAST of MS002431 vs. NCBI nr
Match: XP_038896146.1 (RPM1-interacting protein 4 [Benincasa hispida])

HSP 1 Score: 337.4 bits (864), Expect = 9.0e-89
Identity = 168/219 (76.71%), Postives = 186/219 (84.93%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEPPPS 62
           QRSHVP FGNWE+EGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+  DN  SHE  P+
Sbjct: 3   QRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILKDN--SHEAAPT 62

Query: 63  MPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPLH 122
            P PKDD  T  P P  HERR SREDG FR PYANSPG+RENPGRRQSGSEYSIDRSPLH
Sbjct: 63  KPNPKDD--TTAPKPMTHERRHSREDGGFR-PYANSPGNRENPGRRQSGSEYSIDRSPLH 122

Query: 123 RHAKPTGRESPVAEGRSLDGGHGNRGKTRMK-----PPEGTAVPKFGSWDVNNPASADGF 182
           R AKP+GR+SPV EG+S +GG+GNRGKTRMK      PEGTAVPKFGSWDVNNPASADGF
Sbjct: 123 RQAKPSGRDSPVTEGKSFEGGYGNRGKTRMKNDATPEPEGTAVPKFGSWDVNNPASADGF 182

Query: 183 THIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           THIFG+VR+E++GPGTPP  HSSSPYNNV+N++ + + K
Sbjct: 183 THIFGEVRKEKLGPGTPPPQHSSSPYNNVNNRRPNDSVK 216

[Close]

BLAST of MS002431 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-26
Identity = 85/214 (39.72%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 4   RSHVPPFGNWENEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPDMFSDNSHSHEPPPS 63
           RS+VP FGNWE E NVPYT +FDKARK R  G  I NPNDPE     ++ +S S + PP 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPE-----YNSDSQS-QAPPH 62

Query: 64  MPMPKDDPQTLKPTPTAHERRRSREDGAFRQ----PYANSPGHRENPGRRQSGSEYSIDR 123
            P  +  P+ +     + E  RSRE+   +Q      +++    +  GR    + Y  ++
Sbjct: 63  PPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYD-NK 122

Query: 124 SPLHRHA-KPTGRESPVAEGRSLDGGHGNRGKTRMKPPEGTAVPKFGSWDVNNPASADGF 183
           SPLH+++   TG+  P       D            P + T VPKFG WD NNP+SADG+
Sbjct: 123 SPLHKNSYDGTGKSRPKPTNLRAD----------ESPEKVTVVPKFGDWDENNPSSADGY 182

Query: 184 THIFGKVREER------IGPGTPPVVHSSSPYNN 206
           THIF KVREER       G    P   SS   NN
Sbjct: 183 THIFNKVREERSSGANVSGSSRTPTHQSSRNPNN 199

[Close]

BLAST of MS002431 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 156 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERIGPGTP 195
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 4   KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 42

[Close]

BLAST of MS002431 vs. ExPASy TrEMBL
Match: A0A6J1CY94 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111015304 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.3e-120
Identity = 212/222 (95.50%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEPP 60
           QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+FSDNSHSHEPP
Sbjct: 3   QQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEPP 62

Query: 61  PSMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSP 120
           PSMPMPKDDPQTLKPTPTAHERRRSREDGA RQPYANSPGHRENPGRRQSGSEYSIDRSP
Sbjct: 63  PSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSP 122

Query: 121 LHRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP------PEGTAVPKFGSWDVNNPASA 180
           LHRHAKPTGRESPVAEG+SLDGGHGNRGKTRMKP      PEGTAVPKFG WDVNNPASA
Sbjct: 123 LHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGXWDVNNPASA 182

Query: 181 DGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           DGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK
Sbjct: 183 DGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 224

[Close]

BLAST of MS002431 vs. ExPASy TrEMBL
Match: A0A6J1JWD7 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488479 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.5e-92
Identity = 170/217 (78.34%), Postives = 186/217 (85.71%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEP-PP 62
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP+MF+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 63  SMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPL 122
           ++P PK         PT HE+++SRED  +  PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDDGY-HPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 123 HRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP--PEGTAVPKFGSWDVNNPASADGFTH 182
           HRHAKP+GRESPV EG+  DGGHGNRGKTRMKP  PEGTAVPKFGSWDVNNPASADGFTH
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKPDAPEGTAVPKFGSWDVNNPASADGFTH 182

Query: 183 IFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           IFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AK
Sbjct: 183 IFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAK 209

[Close]

BLAST of MS002431 vs. ExPASy TrEMBL
Match: A0A6J1GP44 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455855 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.5e-92
Identity = 170/217 (78.34%), Postives = 186/217 (85.71%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEP-PP 62
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP+MF+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 63  SMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPL 122
           ++P PK         PT HE+++SRED  +  PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDDGY-HPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 123 HRHAKPTGRESPVAEGRSLDGGHGNRGKTRMKP--PEGTAVPKFGSWDVNNPASADGFTH 182
           HRHAKP+GRESPV EG+  DGGHGNRGKTRMKP  PEGTAVPKFGSWDVNNPASADGFTH
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKPDAPEGTAVPKFGSWDVNNPASADGFTH 182

Query: 183 IFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           IFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AK
Sbjct: 183 IFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAK 209

[Close]

BLAST of MS002431 vs. ExPASy TrEMBL
Match: A0A5A7SK62 (RPM1-interacting protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001050 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.1e-87
Identity = 166/218 (76.15%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 2   QQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEPPP 61
           +QRSHVP FGNWE+EGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+  DN  SHE PP
Sbjct: 22  RQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDN--SHEAPP 81

Query: 62  SMPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPL 121
           S P  KDD  T  P PT HERR SREDG FR PYANSPG+RENPGRRQSGS+YSIDRSPL
Sbjct: 82  SKPSLKDD--TPPPKPTTHERRHSREDGGFR-PYANSPGNRENPGRRQSGSDYSIDRSPL 141

Query: 122 HRHAKPTGRESPVAEGRSLDGGHGNRGKTRMK---PPEGTAVPKFGSWDVNNPASADGFT 181
           HR AKP+ R+S + EG+S +G + NRGKT+ K   PPEGTAVPKFGSWDVNNPASADGFT
Sbjct: 142 HRQAKPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFT 201

Query: 182 HIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           HIFGKVREER+GPGTPP  HSSSPYNN +N++ D + K
Sbjct: 202 HIFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 234

[Close]

BLAST of MS002431 vs. ExPASy TrEMBL
Match: A0A1S3C6U9 (RPM1-interacting protein 4 OS=Cucumis melo OX=3656 GN=LOC103497569 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.1e-87
Identity = 166/217 (76.50%), Postives = 182/217 (83.87%), Query Frame = 0


Query: 3   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDMFSDNSHSHEPPPS 62
           QRSHVP FGNWE+EGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+  DN  SHE PPS
Sbjct: 3   QRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDN--SHEAPPS 62

Query: 63  MPMPKDDPQTLKPTPTAHERRRSREDGAFRQPYANSPGHRENPGRRQSGSEYSIDRSPLH 122
            P  KDD  T  P PT HERR SREDG FR PYANSPG+RENPGRRQSGS+YSIDRSPLH
Sbjct: 63  KPSLKDD--TPPPKPTTHERRHSREDGGFR-PYANSPGNRENPGRRQSGSDYSIDRSPLH 122

Query: 123 RHAKPTGRESPVAEGRSLDGGHGNRGKTRMK---PPEGTAVPKFGSWDVNNPASADGFTH 182
           R AKP+ R+S + EG+S +G + NRGKT+ K   PPEGTAVPKFGSWDVNNPASADGFTH
Sbjct: 123 RQAKPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTH 182

Query: 183 IFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK 217
           IFGKVREER+GPGTPP  HSSSPYNN +N++ D + K
Sbjct: 183 IFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 214

[Close]

BLAST of MS002431 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-28
Identity = 85/214 (39.72%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 4   RSHVPPFGNWENEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPDMFSDNSHSHEPPPS 63
           RS+VP FGNWE E NVPYT +FDKARK R  G  I NPNDPE     ++ +S S + PP 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPE-----YNSDSQS-QAPPH 62

Query: 64  MPMPKDDPQTLKPTPTAHERRRSREDGAFRQ----PYANSPGHRENPGRRQSGSEYSIDR 123
            P  +  P+ +     + E  RSRE+   +Q      +++    +  GR    + Y  ++
Sbjct: 63  PPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYD-NK 122

Query: 124 SPLHRHA-KPTGRESPVAEGRSLDGGHGNRGKTRMKPPEGTAVPKFGSWDVNNPASADGF 183
           SPLH+++   TG+  P       D            P + T VPKFG WD NNP+SADG+
Sbjct: 123 SPLHKNSYDGTGKSRPKPTNLRAD----------ESPEKVTVVPKFGDWDENNPSSADGY 182

Query: 184 THIFGKVREER------IGPGTPPVVHSSSPYNN 206
           THIF KVREER       G    P   SS   NN
Sbjct: 183 THIFNKVREERSSGANVSGSSRTPTHQSSRNPNN 199

[Close]

BLAST of MS002431 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 156 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERIGPGTP 195
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 4   KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 42

[Close]

BLAST of MS002431 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 156 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERIGPGTP 195
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 20  KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 58

[Close]

BLAST of MS002431 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 156 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERIGPGTP 195
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 20  KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 58

[Close]

BLAST of MS002431 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 29/68 (42.65%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 152 MKPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREER-------IGPGT--PPVVHSSSP 211
           M   +G  +PKFG WDVNNPASA+GFT IF K  +E+        GP +   P  + +S 
Sbjct: 1   MAENKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSD 60

The following BLAST results are available for this feature:

BLAST of MS002431 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145992.1	1.3e-119	95.50	RPM1-interacting protein 4-like [Momordica charantia]	[more]
KAG6575990.1	3.9e-92	78.80	RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547760.1	5.1e-92	78.80	RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953250.1	1.1e-91	78.34	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022991999.1 RPM1-intera...	[more]
XP_038896146.1	9.0e-89	76.71	RPM1-interacting protein 4 [Benincasa hispida]	[more]

BLAST of MS002431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	1.0e-26	39.72	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
O22633	2.6e-06	58.97	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]

BLAST of MS002431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY94	6.3e-120	95.50	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111015304 P...	[more]
A0A6J1JWD7	5.5e-92	78.34	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488479 PE=4...	[more]
A0A6J1GP44	5.5e-92	78.34	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455855 PE...	[more]
A0A5A7SK62	3.1e-87	76.15	RPM1-interacting protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3C6U9	3.1e-87	76.50	RPM1-interacting protein 4 OS=Cucumis melo OX=3656 GN=LOC103497569 PE=4 SV=1	[more]

BLAST of MS002431 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	7.3e-28	39.72	RPM1 interacting protein 4	[more]
AT5G55850.1	1.9e-07	58.97	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	1.9e-07	58.97	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	1.9e-07	58.97	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	2.4e-07	42.65	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 156..188 e-value: 1.6E-19 score: 69.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..168
None	No IPR available	PANTHER	PTHR33159:SF6	RPM1-INTERACTING PROTEIN 4	coord: 3..215
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 3..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002431.1	MS002431.1	mRNA