MS002413 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGATTAAGGTTAAGAGCCTTGATCTTAAGGGTAGTGCAAAGGCAGACCGCGGCTTCCACCTCAGCCAGCCCTGCAAGCACAGGGCAGCACTCGTTGGCCGCAGGGTCCCCTAACCCAATGTGCACCAGCCCTCCCAACAGATCCACGCACCCTCCCAGTTTCAGCGTGTCAATTGGGCACGTCTCTTTCCCCTTCGGCGGGCACGGCTTTCCCGACGGCGATGGCTTTCCCAGCACTGGGGGCACCGTCACAGGCGGCAAGCCAACTGGCGGGAGGTCCACGGGCGGCTTGACGGGGGGCACCGTCACGGGTGGCAAGCCAACTGGCGGGAGGTCCACGGGTGGCTTGACG AGATTAAGGTTAAGAGCCTTGATCTTAAGGGTAGTGCAAAGGCAGACCGCGGCTTCCACCTCAGCCAGCCCTGCAAGCACAGGGCAGCACTCGTTGGCCGCAGGGTCCCCTAACCCAATGTGCACCAGCCCTCCCAACAGATCCACGCACCCTCCCAGTTTCAGCGTGTCAATTGGGCACGTCTCTTTCCCCTTCGGCGGGCACGGCTTTCCCGACGGCGATGGCTTTCCCAGCACTGGGGGCACCGTCACAGGCGGCAAGCCAACTGGCGGGAGGTCCACGGGCGGCTTGACGGGGGGCACCGTCACGGGTGGCAAGCCAACTGGCGGGAGGTCCACGGGTGGCTTGACG AGATTAAGGTTAAGAGCCTTGATCTTAAGGGTAGTGCAAAGGCAGACCGCGGCTTCCACCTCAGCCAGCCCTGCAAGCACAGGGCAGCACTCGTTGGCCGCAGGGTCCCCTAACCCAATGTGCACCAGCCCTCCCAACAGATCCACGCACCCTCCCAGTTTCAGCGTGTCAATTGGGCACGTCTCTTTCCCCTTCGGCGGGCACGGCTTTCCCGACGGCGATGGCTTTCCCAGCACTGGGGGCACCGTCACAGGCGGCAAGCCAACTGGCGGGAGGTCCACGGGCGGCTTGACGGGGGGCACCGTCACGGGTGGCAAGCCAACTGGCGGGAGGTCCACGGGTGGCTTGACG RLRLRALILRVVQRQTAASTSASPASTGQHSLAAGSPNPMCTSPPNRSTHPPSFSVSIGHVSFPFGGHGFPDGDGFPSTGGTVTGGKPTGGRSTGGLTGGTVTGGKPTGGRSTGGLT Homology
BLAST of MS002413 vs. NCBI nr
Match: RXI05695.1 (hypothetical protein DVH24_017737 [Malus domestica]) HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20 Identity = 75/121 (61.98%), Postives = 83/121 (68.60%), Query Frame = 0
BLAST of MS002413 vs. NCBI nr
Match: EOY31170.1 (Uncharacterized protein TCM_047111, partial [Theobroma cacao]) HSP 1 Score: 97.4 bits (241), Expect = 8.5e-17 Identity = 69/118 (58.47%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of MS002413 vs. NCBI nr
Match: KAF9662862.1 (hypothetical protein SADUNF_Sadunf18G0098400 [Salix dunnii]) HSP 1 Score: 94.7 bits (234), Expect = 5.5e-16 Identity = 77/158 (48.73%), Postives = 86/158 (54.43%), Query Frame = 0
BLAST of MS002413 vs. NCBI nr
Match: KAB5514652.1 (hypothetical protein DKX38_028558 [Salix brachista]) HSP 1 Score: 93.2 bits (230), Expect = 1.6e-15 Identity = 79/127 (62.20%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of MS002413 vs. NCBI nr
Match: RCV22206.1 (hypothetical protein SETIT_4G202300v2 [Setaria italica]) HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14 Identity = 68/135 (50.37%), Postives = 76/135 (56.30%), Query Frame = 0
BLAST of MS002413 vs. ExPASy TrEMBL
Match: A0A498KIW7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017737 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 75/121 (61.98%), Postives = 83/121 (68.60%), Query Frame = 0
BLAST of MS002413 vs. ExPASy TrEMBL
Match: A0A6N2N0E2 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS447039 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.7e-18 Identity = 82/144 (56.94%), Postives = 85/144 (59.03%), Query Frame = 0
BLAST of MS002413 vs. ExPASy TrEMBL
Match: A0A061GMW5 (Uncharacterized protein (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_047111 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.1e-17 Identity = 69/118 (58.47%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of MS002413 vs. ExPASy TrEMBL
Match: A0A5N5J6X5 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_028558 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 7.7e-16 Identity = 79/127 (62.20%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of MS002413 vs. ExPASy TrEMBL
Match: A0A2G9GKY8 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21529 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 6.5e-15 Identity = 68/117 (58.12%), Postives = 74/117 (63.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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