MS002412 (gene) Bitter gourd (TR) v1

Overview


Name	MS002412
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	scaffold30: 4715947 .. 4716576 (+)
RNA-Seq Expression	MS002412
Synteny	MS002412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTTCAAAATTACACTCCCTCCTCCTAATTTGCATGGTTTTGGTGTCCTCAGCCGCCCCCATGCTGGGCTGCGGCTCCTGCGGCAACCCGCCAAAGAAGCACAAGCCCAGCCCTGGCTCCAAGTCCCCCAAGGGCCCCATTGGCCTCCCGCCCGTCATCGTTAAGCCGCCGGGCGGTCTCCCGCCCATCGGTCTCCCACCCGTCAAGCCACCCGTGGACCTCCCGCCAGTTGGCTTGCCACCCGTGACGGTGCCCCCCGTCAAGCCGCCCGTGGACCTCCCGCCAGTTGGCTTGCCGCCTGTGACGGTGCCCCCAGTGCTGGGAAAGCCATCGCCGTCGGGAAAGCCGTGCCCGCCGAAGGGGAAAGAGACGTGCCCAATTGACACGCTGAAACTGGGAGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGTTAGGGGACCCTGCGGCCAACGAGTGCTGCCCTGTGCTTGCAGGGCTGGCTGAGGTGGAAGCCGCGGTCTGCCTTTGCACTACCCTTAAGATCAAGGCTCTTAACCTTAATCTCTATGTCCCTATTGCCCTTCAGCTCCTAATCACCTGTGGCAAGACCCCTCCTCCTGGCTACACTTGCTCCCTT

mRNA sequence

ATGGAGCCTTCAAAATTACACTCCCTCCTCCTAATTTGCATGGTTTTGGTGTCCTCAGCCGCCCCCATGCTGGGCTGCGGCTCCTGCGGCAACCCGCCAAAGAAGCACAAGCCCAGCCCTGGCTCCAAGTCCCCCAAGGGCCCCATTGGCCTCCCGCCCGTCATCGTTAAGCCGCCGGGCGGTCTCCCGCCCATCGGTCTCCCACCCGTCAAGCCACCCGTGGACCTCCCGCCAGTTGGCTTGCCACCCGTGACGGTGCCCCCCGTCAAGCCGCCCGTGGACCTCCCGCCAGTTGGCTTGCCGCCTGTGACGGTGCCCCCAGTGCTGGGAAAGCCATCGCCGTCGGGAAAGCCGTGCCCGCCGAAGGGGAAAGAGACGTGCCCAATTGACACGCTGAAACTGGGAGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGTTAGGGGACCCTGCGGCCAACGAGTGCTGCCCTGTGCTTGCAGGGCTGGCTGAGGTGGAAGCCGCGGTCTGCCTTTGCACTACCCTTAAGATCAAGGCTCTTAACCTTAATCTCTATGTCCCTATTGCCCTTCAGCTCCTAATCACCTGTGGCAAGACCCCTCCTCCTGGCTACACTTGCTCCCTT

Coding sequence (CDS)

ATGGAGCCTTCAAAATTACACTCCCTCCTCCTAATTTGCATGGTTTTGGTGTCCTCAGCCGCCCCCATGCTGGGCTGCGGCTCCTGCGGCAACCCGCCAAAGAAGCACAAGCCCAGCCCTGGCTCCAAGTCCCCCAAGGGCCCCATTGGCCTCCCGCCCGTCATCGTTAAGCCGCCGGGCGGTCTCCCGCCCATCGGTCTCCCACCCGTCAAGCCACCCGTGGACCTCCCGCCAGTTGGCTTGCCACCCGTGACGGTGCCCCCCGTCAAGCCGCCCGTGGACCTCCCGCCAGTTGGCTTGCCGCCTGTGACGGTGCCCCCAGTGCTGGGAAAGCCATCGCCGTCGGGAAAGCCGTGCCCGCCGAAGGGGAAAGAGACGTGCCCAATTGACACGCTGAAACTGGGAGGGTGCGTGGATCTGTTGGGAGGGCTGGTGCACATTGGGTTAGGGGACCCTGCGGCCAACGAGTGCTGCCCTGTGCTTGCAGGGCTGGCTGAGGTGGAAGCCGCGGTCTGCCTTTGCACTACCCTTAAGATCAAGGCTCTTAACCTTAATCTCTATGTCCCTATTGCCCTTCAGCTCCTAATCACCTGTGGCAAGACCCCTCCTCCTGGCTACACTTGCTCCCTT

Protein sequence

MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPGGLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCPPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL

Homology

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BLAST of MS002412 vs. NCBI nr
Match: XP_022144829.1 (36.4 kDa proline-rich protein [Momordica charantia])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPG 60
           MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPG
Sbjct: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPG 60

Query: 61  GLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCP 120
           GLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCP
Sbjct: 61  GLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCP 120

Query: 121 PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIK 180
           PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIK
Sbjct: 121 PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIK 180

Query: 181 ALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           ALNLNLYVPIALQLLITCGKTPPPGYTCSL
Sbjct: 181 ALNLNLYVPIALQLLITCGKTPPPGYTCSL 210

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BLAST of MS002412 vs. NCBI nr
Match: XP_023529211.1 (36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 166/216 (76.85%), Postives = 184/216 (85.19%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPK-GPIGLPPVIVKP 60
           ME SK++SL L+CM+ +S+A P+LGCG+CGN PPKK KP  GSKSPK GPIGLPP+    
Sbjct: 1   MESSKIYSLFLLCMLFLSTATPILGCGACGNPPPKKGKPGSGSKSPKGGPIGLPPIT--- 60

Query: 61  PGGLPPIGLPPVKPPVDLPPVGLPPVTVPP-VKPPVD---LPPVGLPPVTVPPVLGKPSP 120
              LPPI    VKPP+DLPPV  PP+++PP VKPPVD   LPPV LPPVTVPPVL KPSP
Sbjct: 61  ---LPPI----VKPPIDLPPVVKPPISLPPIVKPPVDLPPLPPVTLPPVTVPPVLTKPSP 120

Query: 121 SGKPCPPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLC 180
           + KPCPP GKETCPIDTLKLG CVDLLGGLVHIGLGDPA NECCPVL+GLAEVEAAVCLC
Sbjct: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180

Query: 181 TTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           TTLKIKAL+LN+YVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 206

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BLAST of MS002412 vs. NCBI nr
Match: XP_022961343.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 165/235 (70.21%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPKGPIGLP---PVIV 60
           MEPSK+H+LLL+CM+ +S+AAP+ GCGSCG  PPKK KP  GSKSPKGPI  P   P +V
Sbjct: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKSPKGPIVPPITLPPVV 60

Query: 61  KPPGGLPPIGLPPVKPPVDLPPV-----GLPPVTVPPVKPPVDL---------------P 120
           KPP  +PP+ LPPVKPP+DLPPV      +PPV +PPVKPP+DL               P
Sbjct: 61  KPPIKIPPVPLPPVKPPIDLPPVVKPPIKIPPVPLPPVKPPIDLPPVIKPPIKIPPVPIP 120

Query: 121 PVGLPPVTVPPVLGKPSPSGKPC-PPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAAN 180
           PV +PPVT PPV+  PSP   PC PP GKETCPIDTLKLGGCVDLLGGLVHIG+GDPAAN
Sbjct: 121 PVTVPPVTAPPVIKNPSPGKNPCPPPPGKETCPIDTLKLGGCVDLLGGLVHIGVGDPAAN 180

Query: 181 ECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
            CCP+++GLAE+EAAVCLCTTLKIKALNLN+YVPIALQLLITCGKTPPPGYTCSL
Sbjct: 181 ACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIALQLLITCGKTPPPGYTCSL 235

[Close]

BLAST of MS002412 vs. NCBI nr
Match: XP_022933855.1 (36.4 kDa proline-rich protein-like [Cucurbita moschata])

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-77
Identity = 165/216 (76.39%), Postives = 183/216 (84.72%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPK-GPIGLPPVIVKP 60
           ME SK++SL L+CM+ +S+A P+ GCG+CGN PPKK KP  GSKSPK GPIGLPP+    
Sbjct: 1   MESSKIYSLFLVCMLFLSTATPIFGCGACGNPPPKKGKPGSGSKSPKGGPIGLPPIT--- 60

Query: 61  PGGLPPIGLPPVKPPVDLPPVGLPPVTVPP-VKPPVD---LPPVGLPPVTVPPVLGKPSP 120
              LPPI    VKPP+DLPPV  PP+++PP VKPPVD   LPPV LPPVTVPPVL KPSP
Sbjct: 61  ---LPPI----VKPPIDLPPVVKPPISLPPIVKPPVDLPPLPPVTLPPVTVPPVLTKPSP 120

Query: 121 SGKPCPPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLC 180
           + KPCPP GKETCPIDTLKLG CVDLLGGLVHIGLGDPA NECCPVL+GLAEVEAAVCLC
Sbjct: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180

Query: 181 TTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           TTLKIKAL+LN+YVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 206

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BLAST of MS002412 vs. NCBI nr
Match: XP_022966511.1 (36.4 kDa proline-rich protein-like [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-77
Identity = 165/216 (76.39%), Postives = 183/216 (84.72%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPK-GPIGLPPVIVKP 60
           ME SK++SL L+CM+ +S+A P+ GCG+CGN PPKK KP  GSKSPK GPIGLPP+    
Sbjct: 1   MESSKIYSLFLLCMLFLSTATPIFGCGACGNPPPKKVKPGSGSKSPKGGPIGLPPI---- 60

Query: 61  PGGLPPIGLPPVKPPVDLPPVGLPPVTVPP-VKPPVD---LPPVGLPPVTVPPVLGKPSP 120
              LPPI    VKPP+DLPPV  PP+++PP VKPPVD   LPPV LPPVTVPPVL KPSP
Sbjct: 61  --SLPPI----VKPPIDLPPVVKPPISLPPIVKPPVDLPPLPPVTLPPVTVPPVLTKPSP 120

Query: 121 SGKPCPPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLC 180
           + KPCPP GKETCPIDTLKLG CVDLLGGLVHIGLGDPA NECCPVL+GLAEVEAAVCLC
Sbjct: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180

Query: 181 TTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           TTLKIKAL+LN+YVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 206

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BLAST of MS002412 vs. ExPASy Swiss-Prot
Match: Q00451 (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-31
Identity = 95/224 (42.41%), Postives = 124/224 (55.36%), Query Frame = 0


Query: 22  PMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPGGLPPIGLPPV--KPPVDLPPV 81
           P++   S   PPK    +P   SP  PI  PP++  P    PPI  PPV  KPP   PP+
Sbjct: 120 PIVSPPSTPKPPKTPPFTPKPPSPIPPIVSPPIVYPPITPTPPIVHPPVTPKPPSPTPPI 179

Query: 82  GLPPVTVPPV------------------------KPPVDLPP--VGLPPVTVPPVL-GKP 141
             PP+  PP+                         PPV +PP  V  PPV  PP++   P
Sbjct: 180 VSPPIVYPPITPTPPVVSPPIIPTPPIVSPPFVPNPPVVIPPPYVPSPPVVTPPIVPTPP 239

Query: 142 SPSGKPCP-------PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLA 201
           +P   P P       P  + TCPID LKLG CVD+LGGL+HIG+G  A   CCP+L GL 
Sbjct: 240 TPCPPPPPPPAIIPSPPAQPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLV 299

Query: 202 EVEAAVCLCTTLKIKALNLNLYVPIALQLLI-TCGKTPPPGYTC 209
           +++AA+CLCTT+++K LN+N+ +PIALQ+LI  CGK PP  + C
Sbjct: 300 DLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKC 343

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BLAST of MS002412 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 83  PVTVPPVKP-PVDLPPVGLPPVTVPPVLGKPSPSGKPCPP-----KGKETCPIDTLKLGG 142
           P  VP  KP PV  PP        PP    PSP+ +P  P         +CPID LKLG 
Sbjct: 36  PKPVPSPKPKPVQCPP--------PPRPSVPSPNPRPVTPPRTPGSSGNSCPIDALKLGV 95

Query: 143 CVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIALQLLI 202
           C ++L  L++I LG P++ +CC ++ GL +V+AA+CLCT L+   L +NL VPI+L +L+
Sbjct: 96  CANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINLNVPISLSVLL 155

Query: 203 -TCGKTPPPGYTCS 210
             C +  P G+ C+
Sbjct: 156 NVCNRKLPSGFQCA 161

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BLAST of MS002412 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.7e-15
Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 69  PVKPPVDLPPVGLPPVTVPPVKP-PVDLPPVGLPPVTVPPVLGKPSPSGKPCPPKGKETC 128
           P   PV  P     P  VP  KP PV  P V  P V  P     P P   P  P     C
Sbjct: 34  PKHKPVPSP----KPKPVPSPKPKPVPSPSVPSPSVPSP----NPRPVTPPRTPGSSGNC 93

Query: 129 PIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNLNLY 188
           PID L+LG C ++L  L++I LG P+A  CC ++ GL +++AA+CLCT L+   L +NL 
Sbjct: 94  PIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLN 153

Query: 189 VPIALQLLI-TCGKTPPPGYTCS 210
           VPI+L +L+  C +  P G+ C+
Sbjct: 154 VPISLSVLLNVCNRKVPSGFQCA 168

[Close]

BLAST of MS002412 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 60/151 (39.74%), Postives = 81/151 (53.64%), Query Frame = 0


Query: 68  PPVKP-PVDLPPVGLPPVTVPPVKPP-VDLPPVGLPPVTVPPVLGKPSPSGKPCP----- 127
           P  KP P+  P V  P V  P V  P V  P V  P V  P V     PS  P P     
Sbjct: 32  PSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPNPTPVIPPR 91

Query: 128 -PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKI 187
            P     CPID L+LG C ++L GL+++ LG P+   CC ++ GL +++AAVCLCT L+ 
Sbjct: 92  TPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRA 151

Query: 188 KALNLNLYVPIALQLLI-TCGKTPPPGYTCS 210
             L +NL VPI+L +L+  C +  P  + C+
Sbjct: 152 NVLGINLNVPISLSVLLNVCNRRLPSNFQCA 182

[Close]

BLAST of MS002412 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-14
Identity = 56/146 (38.36%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 67  LPPVKPPVDLPPVGLPPVTVPPV-KPPVDLPPVGLPPVTVPPVLG-KPSPSGKPCPPKGK 126
           L P    V  P V  P    P +  P V  P V  P V  P V    P+P   P  P   
Sbjct: 32  LSPKPRTVPSPKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVTPPRTPGSS 91

Query: 127 ETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNL 186
             CPID L+LG C ++L GL+++ LG P+A  CC ++ GL +++AA+CLCT L+   L +
Sbjct: 92  GNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGI 151

Query: 187 NLYVPIALQLLI-TCGKTPPPGYTCS 210
           NL VPI+L +L+  C +  P  + C+
Sbjct: 152 NLNVPISLSVLLNVCNRRLPSDFQCA 177

[Close]

BLAST of MS002412 vs. ExPASy TrEMBL
Match: A0A6J1CTE9 (36.4 kDa proline-rich protein OS=Momordica charantia OX=3673 GN=LOC111014420 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPG 60
           MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPG
Sbjct: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPG 60

Query: 61  GLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCP 120
           GLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCP
Sbjct: 61  GLPPIGLPPVKPPVDLPPVGLPPVTVPPVKPPVDLPPVGLPPVTVPPVLGKPSPSGKPCP 120

Query: 121 PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIK 180
           PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIK
Sbjct: 121 PKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIK 180

Query: 181 ALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           ALNLNLYVPIALQLLITCGKTPPPGYTCSL
Sbjct: 181 ALNLNLYVPIALQLLITCGKTPPPGYTCSL 210

[Close]

BLAST of MS002412 vs. ExPASy TrEMBL
Match: A0A6J1HBI4 (36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111461860 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.7e-78
Identity = 165/235 (70.21%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPKGPIGLP---PVIV 60
           MEPSK+H+LLL+CM+ +S+AAP+ GCGSCG  PPKK KP  GSKSPKGPI  P   P +V
Sbjct: 1   MEPSKIHALLLVCMLFLSTAAPIFGCGSCGKPPPKKVKPGSGSKSPKGPIVPPITLPPVV 60

Query: 61  KPPGGLPPIGLPPVKPPVDLPPV-----GLPPVTVPPVKPPVDL---------------P 120
           KPP  +PP+ LPPVKPP+DLPPV      +PPV +PPVKPP+DL               P
Sbjct: 61  KPPIKIPPVPLPPVKPPIDLPPVVKPPIKIPPVPLPPVKPPIDLPPVIKPPIKIPPVPIP 120

Query: 121 PVGLPPVTVPPVLGKPSPSGKPC-PPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAAN 180
           PV +PPVT PPV+  PSP   PC PP GKETCPIDTLKLGGCVDLLGGLVHIG+GDPAAN
Sbjct: 121 PVTVPPVTAPPVIKNPSPGKNPCPPPPGKETCPIDTLKLGGCVDLLGGLVHIGVGDPAAN 180

Query: 181 ECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
            CCP+++GLAE+EAAVCLCTTLKIKALNLN+YVPIALQLLITCGKTPPPGYTCSL
Sbjct: 181 ACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIALQLLITCGKTPPPGYTCSL 235

[Close]

BLAST of MS002412 vs. ExPASy TrEMBL
Match: A0A6J1F602 (36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111441146 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 165/216 (76.39%), Postives = 183/216 (84.72%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPK-GPIGLPPVIVKP 60
           ME SK++SL L+CM+ +S+A P+ GCG+CGN PPKK KP  GSKSPK GPIGLPP+    
Sbjct: 1   MESSKIYSLFLVCMLFLSTATPIFGCGACGNPPPKKGKPGSGSKSPKGGPIGLPPIT--- 60

Query: 61  PGGLPPIGLPPVKPPVDLPPVGLPPVTVPP-VKPPVD---LPPVGLPPVTVPPVLGKPSP 120
              LPPI    VKPP+DLPPV  PP+++PP VKPPVD   LPPV LPPVTVPPVL KPSP
Sbjct: 61  ---LPPI----VKPPIDLPPVVKPPISLPPIVKPPVDLPPLPPVTLPPVTVPPVLTKPSP 120

Query: 121 SGKPCPPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLC 180
           + KPCPP GKETCPIDTLKLG CVDLLGGLVHIGLGDPA NECCPVL+GLAEVEAAVCLC
Sbjct: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180

Query: 181 TTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           TTLKIKAL+LN+YVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 206

[Close]

BLAST of MS002412 vs. ExPASy TrEMBL
Match: A0A6J1HPJ2 (36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111466144 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.2e-77
Identity = 165/216 (76.39%), Postives = 183/216 (84.72%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPK-GPIGLPPVIVKP 60
           ME SK++SL L+CM+ +S+A P+ GCG+CGN PPKK KP  GSKSPK GPIGLPP+    
Sbjct: 1   MESSKIYSLFLLCMLFLSTATPIFGCGACGNPPPKKVKPGSGSKSPKGGPIGLPPI---- 60

Query: 61  PGGLPPIGLPPVKPPVDLPPVGLPPVTVPP-VKPPVD---LPPVGLPPVTVPPVLGKPSP 120
              LPPI    VKPP+DLPPV  PP+++PP VKPPVD   LPPV LPPVTVPPVL KPSP
Sbjct: 61  --SLPPI----VKPPIDLPPVVKPPISLPPIVKPPVDLPPLPPVTLPPVTVPPVLTKPSP 120

Query: 121 SGKPCPPKGKETCPIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLC 180
           + KPCPP GKETCPIDTLKLG CVDLLGGLVHIGLGDPA NECCPVL+GLAEVEAAVCLC
Sbjct: 121 ASKPCPPSGKETCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPVLSGLAEVEAAVCLC 180

Query: 181 TTLKIKALNLNLYVPIALQLLITCGKTPPPGYTCSL 211
           TTLKIKAL+LN+YVPIALQLLI+CGKTPPPGYTCSL
Sbjct: 181 TTLKIKALSLNIYVPIALQLLISCGKTPPPGYTCSL 206

[Close]

BLAST of MS002412 vs. ExPASy TrEMBL
Match: A0A6J1JHY3 (36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111485263 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 164/259 (63.32%), Postives = 187/259 (72.20%), Query Frame = 0


Query: 1   MEPSKLHSLLLICMVLVSSAAPMLGCGSCGN-PPKKHKPSPGSKSPKGPI---------- 60
           MEPSK+H++LL+CM+ +S+AAP+ GCGSCG  PPKK KP    KSPKGPI          
Sbjct: 1   MEPSKIHAVLLVCMLFLSTAAPIFGCGSCGKPPPKKVKP----KSPKGPIVPPITLPPVV 60

Query: 61  ---------GLPPV--------IVKPPGGLPPIGLPPVKPPVDLPPV-----GLPPVTVP 120
                     LPPV        IVKPP  +PP+ +PPVKPP+DLPPV      +PPV +P
Sbjct: 61  KPPIKIPPVPLPPVKPPIDLPPIVKPPIKIPPVPIPPVKPPIDLPPVVKPPIKIPPVPLP 120

Query: 121 PVKPPVDL---------------PPVGLPPVTVPPVLGKPSPSGKPCP-PKGKETCPIDT 180
           PVKPP+DL               PPV +PPVT PPV+  PSP   PCP P GKETCPIDT
Sbjct: 121 PVKPPIDLPPVIKPPIKIPPVPIPPVTVPPVTAPPVIKNPSPGKNPCPTPPGKETCPIDT 180

Query: 181 LKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIA 211
           LKLGGCVDLLGGLVHIG+GDPAAN CCP+++GLAE+EAAVCLCTTLKIKALNLN+YVPIA
Sbjct: 181 LKLGGCVDLLGGLVHIGVGDPAANACCPIISGLAELEAAVCLCTTLKIKALNLNIYVPIA 240

[Close]

BLAST of MS002412 vs. TAIR 10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-45
Identity = 136/296 (45.95%), Postives = 163/296 (55.07%), Query Frame = 0


Query: 1   MEPSKLHS----LLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPI------- 60
           M+ SKL S    L LIC++ +   +  L CGSC NP K  K SP  K+PK P+       
Sbjct: 1   MDSSKLSSLSLCLFLICIIYLPQHS--LACGSC-NPRKGGKHSP--KAPKLPVPPVTVPK 60

Query: 61  -----------GLPPVIVK----PPGGLPPIGLPPVK----------------PPVDLPP 120
                       +PPV V     PP  +P + +PPV                 PPV +P 
Sbjct: 61  LPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPK 120

Query: 121 VGLPPVTVPPVK-PPVDLPPVGLPPVTV-------------PPVLG-------------- 180
           + +PPVTVP +  PPV +P + +PPVTV             PPV+G              
Sbjct: 121 LPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPLPPISGLPIPPVVGPNLPLPPLPIVGPI 180

Query: 181 ------KPSPSGKPCPPK----------GKETCPIDTLKLGGCVDLLGGLVHIGLGDPAA 211
                  P+  GK CPP           GK TCPIDTLKLG CVDLLGGLV IGLGDPA 
Sbjct: 181 LPPGTTPPATGGKDCPPPPGSVKPPSGGGKATCPIDTLKLGACVDLLGGLVKIGLGDPAV 240

[Close]

BLAST of MS002412 vs. TAIR 10
Match: AT2G10940.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-45
Identity = 136/296 (45.95%), Postives = 163/296 (55.07%), Query Frame = 0


Query: 1   MEPSKLHS----LLLICMVLVSSAAPMLGCGSCGNPPKKHKPSPGSKSPKGPI------- 60
           M+ SKL S    L LIC++ +   +  L CGSC NP K  K SP  K+PK P+       
Sbjct: 1   MDSSKLSSLSLCLFLICIIYLPQHS--LACGSC-NPRKGGKHSP--KAPKLPVPPVTVPK 60

Query: 61  -----------GLPPVIVK----PPGGLPPIGLPPVK----------------PPVDLPP 120
                       +PPV V     PP  +P + +PPV                 PPV +P 
Sbjct: 61  LPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPK 120

Query: 121 VGLPPVTVPPVK-PPVDLPPVGLPPVTV-------------PPVLG-------------- 180
           + +PPVTVP +  PPV +P + +PPVTV             PPV+G              
Sbjct: 121 LPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPLPPISGLPIPPVVGPNLPLPPLPIVGPI 180

Query: 181 ------KPSPSGKPCPPK----------GKETCPIDTLKLGGCVDLLGGLVHIGLGDPAA 211
                  P+  GK CPP           GK TCPIDTLKLG CVDLLGGLV IGLGDPA 
Sbjct: 181 LPPGTTPPATGGKDCPPPPGSVKPPSGGGKATCPIDTLKLGACVDLLGGLVKIGLGDPAV 240

[Close]

BLAST of MS002412 vs. TAIR 10
Match: AT1G62500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 8.8e-39
Identity = 105/201 (52.24%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 32  PPKKHKPSPGSKSPKGPIGLPPVIVKPPG-GLPPIGLPPVK-PPVDLPPVGLPPVTVPP- 91
           PP   +P P  + P  P+  PP IV+PP    PPI +PP++ PPV  PP  LPP+T PP 
Sbjct: 95  PPVVVRPPPIIRPP--PVVYPPPIVRPPPITRPPIIIPPIQPPPVTTPPGLLPPITTPPG 154

Query: 92  VKPPVDLPPVGLPPVTV-----------PPVLGKPSPSGKP--CPPKG--------KETC 151
           + PPV  PP  LPPVT            PPV   P  SG P   PP G        + TC
Sbjct: 155 LLPPVTTPPGLLPPVTTPPGLLPPIINPPPVTVPPPSSGYPPYGPPSGGGGGGGGKQPTC 214

Query: 152 PIDTLKLGGCVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNLNLY 209
           PI+ LKLG CVD+LGGL+HIGLG+P  N CCPVL GL E+EAAVCLCTT+++K LNLN++
Sbjct: 215 PINALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLLNLNIF 274

[Close]

BLAST of MS002412 vs. TAIR 10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein )

HSP 1 Score: 154.8 bits (390), Expect = 7.5e-38
Identity = 99/184 (53.80%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 33  PKKHKPSPGSKSPKGPIGLPPVIVKPPGGLPPIGLPP------VKPPVDLPPVGLPPVTV 92
           P  HKP P    P  P   PPV V PP   PP+  PP      V PP   PPV  PP   
Sbjct: 153 PPHHKPPPTPCPPPTPTPTPPV-VTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPT 212

Query: 93  PPV-KPPVDLPPVGLPPVTVPPVLGKPSPSGKPCPPKGKETCPIDTLKLGGCVDLLGGLV 152
           PPV  PP   PPV  PP   PPV+  P+P+    P    ETCPIDTLKLG CVD+LGGL+
Sbjct: 213 PPVITPPTPTPPVVTPPTPTPPVVTPPTPTP---PTPIPETCPIDTLKLGACVDVLGGLI 272

Query: 153 HIGLGDPAAN-ECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIALQLLITCGKTPPP 209
           HIGLG   A  ECCPVL GL +++AAVCLCTT+K+K LN++L +PIAL+LL+ CGKTPP 
Sbjct: 273 HIGLGKSHAKAECCPVLGGLLDLDAAVCLCTTIKLKLLNIDLVLPIALELLLDCGKTPPS 332

[Close]

BLAST of MS002412 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-37
Identity = 93/192 (48.44%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 19   SAAPMLGCGSCGNPPKKHKPSPGSKSPKGPIGLPPVIVKPPGGLPPIGLPP-VKPPVDLP 78
            +A P +       PP    P       K P+  PP  V PP   PPI  PP  +PPV  P
Sbjct: 1291 TATPPVATSPIAKPPVATPPPATPPVAKPPVATPPT-VTPPVATPPIAKPPGARPPVATP 1350

Query: 79   PVGLPPVTVPPV-KPPVDLPPVGLPPVTVPPVLGKPSPSGKPCPPKGKETCPIDTLKLGG 138
            PV  PP+   PV  PP+  PPV   P+  PP+   P  +     PK   TCPIDTLKLG 
Sbjct: 1351 PVATPPIAKSPVATPPMTKPPVASSPIATPPIAKTPIATPPTTMPK---TCPIDTLKLGS 1410

Query: 139  CVDLLGGLVHIGLGDPAANECCPVLAGLAEVEAAVCLCTTLKIKALNLNLYVPIALQLLI 198
            CVDLLGGLVHIG+G  A  +CCPV+ GL +++AAVCLCTT+K K LN+++ +PIAL++L+
Sbjct: 1411 CVDLLGGLVHIGIGKSAKEKCCPVVEGLVDLDAAVCLCTTIKAKLLNIDVILPIALEVLL 1470

Query: 199  TCGKTPPPGYTC 209
             CGK PPPG+ C
Sbjct: 1471 NCGKNPPPGFKC 1478

The following BLAST results are available for this feature:

BLAST of MS002412 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144829.1	2.4e-110	100.00	36.4 kDa proline-rich protein [Momordica charantia]	[more]
XP_023529211.1	1.2e-77	76.85	36.4 kDa proline-rich protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961343.1	1.2e-77	70.21	36.4 kDa proline-rich protein-like [Cucurbita moschata]	[more]
XP_022933855.1	2.6e-77	76.39	36.4 kDa proline-rich protein-like [Cucurbita moschata]	[more]
XP_022966511.1	4.5e-77	76.39	36.4 kDa proline-rich protein-like [Cucurbita maxima]	[more]

BLAST of MS002412 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00451	3.9e-31	42.41	36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV...	[more]
Q9SU35	4.1e-17	41.04	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE...	[more]
Q39176	8.7e-15	40.56	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
Q9SU34	1.1e-14	39.74	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]
Q9SU33	4.3e-14	38.36	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]

BLAST of MS002412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTE9	1.1e-110	100.00	36.4 kDa proline-rich protein OS=Momordica charantia OX=3673 GN=LOC111014420 PE=...	[more]
A0A6J1HBI4	5.7e-78	70.21	36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111461860...	[more]
A0A6J1F602	1.3e-77	76.39	36.4 kDa proline-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111441146...	[more]
A0A6J1HPJ2	2.2e-77	76.39	36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111466144 P...	[more]
A0A6J1JHY3	1.6e-72	63.32	36.4 kDa proline-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111485263 P...	[more]

BLAST of MS002412 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G10940.1	3.7e-45	45.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G10940.2	3.7e-45	45.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62500.1	8.8e-39	52.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22120.1	7.5e-38	53.80	cell wall-plasma membrane linker protein	[more]
AT3G22142.1	6.3e-37	48.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 127..208 e-value: 3.0E-5 score: 33.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 126..209 e-value: 9.3E-22 score: 78.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 129..209
IPR027923	Hydrophobic seed protein domain	PFAM	PF14547	Hydrophob_seed	coord: 126..208 e-value: 3.6E-27 score: 94.4
IPR027923	Hydrophobic seed protein domain	CDD	cd01958	HPS_like	coord: 126..208 e-value: 6.95262E-25 score: 91.236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..57
None	No IPR available	PANTHER	PTHR31731:SF1	36.4 KDA PROLINE-RICH PROTEIN	coord: 116..209 coord: 1..112
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 116..209
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002412.1	MS002412.1	mRNA