MS002411 (gene) Bitter gourd (TR) v1

Overview


Name	MS002411
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	vesicle-associated membrane protein 711-like
Location	scaffold30: 4703576 .. 4705887 (-)
RNA-Seq Expression	MS002411
Synteny	MS002411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCTCTATGGAATGGTGGCCAGAGGACACGTCGTTTTGGCGGAGTTTTGCGCTACGCAGACCAATGCGAGCGCCATTGCGAGGCAGATAATGGAGAAGATGAAGCAGGGAGACGATGATAGCAATGCGTCCTATTCTCATGATCGCTACATCTTTCACATCAAGAAGACCGATGGCCTGACCGTTCTTTGCATGGCCGACGAAGCCTCTGGAAGTAAGCCTCCTTTTGAATGATTTTTAAACTCTCCAAGTTTTTCTGCAACTTAGTTCGAAATTCGAATCCAGCGAGCCGGCGAGGTATGGTTCCTAATTGAGATAATAATAGGTTGCTTTAAGTGAGATTTGAGGATCGACAATGCGTTCTGAGAATTTGTTTGTTTGCGATAGTTTTTACAATGTTATCATTTCAATGTGGTTCCTGATAAGCGATTTTGACCTCTTTGCATCGATTTCGAACGATATTGGGAGAGAAATTCTGATGACTTCAATGTCTTCCTCTTTCTATCTGTTCAAACAAAGTGGTTGTGTAACAATGGTAGGTGCAAGTCACAAGCCAAAAAAACTTAATCTATCGGTTCGGCTGTTAAACCAAACATTCGTAAGTTCACTTTTTGTGTTGTAATTTTATGTTGATCGAATTTCATAGTTCCTGAGGGCAGAAAAAACTGTTTGCTCGAGGCAGATTTGTTTTAAATCATTTCTGGATTAACAACATGTATAATAAATGCCTTATACTTCAGTTTTTAGACCATACAAGTATTTTGAGGAAGTATAGAAATGGTCCGGATTCATATAGTTTCTCGTGAGTATCCTTTCTCTCCCAGCTTTGATCGAGAATTGCAAGAAAAAGTTAATTGACGAGATTTTGAAGGTTGCCTCTACAAATTGGAAAGAAACTTGTGTGAGAAAGTGCATTTCTGTTTTGTTTTCGTTTGTTAGTTCAATTCCTTGAAACAGAATGCAACCAGTTCGAAACTTTGTTTAAGCAGTAGATGCTTTTATTACGATATCAGGCTTTAGTTCTTGTTGAGCTCTCGGAGATTATTCAGAGCGAGAATTCTCAATTTGAATCTACTTGTTTGCAATGGAAATTTTCTTTATCTGTATTAAACGAGTACTATCACTTAGTTTACTAGCTTTCATTTTTTTAATATCTAACTCTTATTCAATTTATCAGTTTCACATTCAACGTGATCAGAGAGTAGCATTCTCATTAACCGGTGATACTTTCAATACTTGTGCAGGGAGAATTCCTTTTGCATTTCTCGAAGACATTCACCAAAGATTTGTGAAGACTTACGCTCGTACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCCAACGATCCAAATGCAGATAGGCTGAACCGCTTAAAAGGTGAAATGAGTCAGGCAAGTTCCGAAAATTGTCTATTGGACTCTGTTTGATCTAAGTTGTTCATCCTATGGATATTTTGAGCCTTTGAAACAATGGTTCATCGTGCTTACCAAAATTCAGCTAATAGTCGTTGCTGTTTTGTACTGTCTCTTAGTCTAAGCAATTGATTTAATTAGCATCACCAGAGTACGTAAAATAAATACTTTGATGGTAGATAAGAAAATTTCTAATGATCCAATTGCTGATAGGCTAAACTGCTTCAAATGTGTCAGGCAAGTTGACAAAGCTGTCTAGACTCTGTTTTATCCAAGTTGTTTTCCTAAGATCTTTTGAAATAATAGCTCCCTGTGCTTTCTAAAATTCAGCTAATTATCGTTACTGCTCACCACTGATTCTTAGCAATTGAATTAATTAGAATCAGAGGACGTTAAAGAAAGACTCTGTTGATATATAAGAATTATTATCTGATGGTTTTTTGTAGGCCAGAGATTAGTTTTACATTCTTTATGTTAGTTTACGTTCTCTCTTATAAACACTTATAATCTACGTAAGACTGCTAAGCTATAGAGTAATATAACATTTCAGTTTTATCAATCAGTTCAGGATAAAAAGAGCCCTATTATAGTTAAAATAACTGTATTTAAAGGAAGCTAGTTCACATCGGGCCAGTATCTGGTTTCACAATTTGTTAATTCATCAAAGAATAGTATTTGATGACAGGTGAGGAACGTGATGATAGATAATATTGACAAAGTATTGGAGAGAGGTGACCGCTTGGCTTTGCTGGTCGAGAAAACTACAAATATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGTCGCTACAGAAACACCTTGTGGTGGAGAAACTTCAAACTTTCG

mRNA sequence

ATGGGGATTCTCTATGGAATGGTGGCCAGAGGACACGTCGTTTTGGCGGAGTTTTGCGCTACGCAGACCAATGCGAGCGCCATTGCGAGGCAGATAATGGAGAAGATGAAGCAGGGAGACGATGATAGCAATGCGTCCTATTCTCATGATCGCTACATCTTTCACATCAAGAAGACCGATGGCCTGACCGTTCTTTGCATGGCCGACGAAGCCTCTGGAAGGAGAATTCCTTTTGCATTTCTCGAAGACATTCACCAAAGATTTGTGAAGACTTACGCTCGTACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCCAACGATCCAAATGCAGATAGGCTGAACCGCTTAAAAGGTGAAATGAGTCAGGCAAGTTCCGAAAATTGTCTATTGGACTCTGTGAGGAACGTGATGATAGATAATATTGACAAAGTATTGGAGAGAGGTGACCGCTTGGCTTTGCTGGTCGAGAAAACTACAAATATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGTCGCTACAGAAACACCTTGTGGTGGAGAAACTTCAAACTTTCG

Coding sequence (CDS)

ATGGGGATTCTCTATGGAATGGTGGCCAGAGGACACGTCGTTTTGGCGGAGTTTTGCGCTACGCAGACCAATGCGAGCGCCATTGCGAGGCAGATAATGGAGAAGATGAAGCAGGGAGACGATGATAGCAATGCGTCCTATTCTCATGATCGCTACATCTTTCACATCAAGAAGACCGATGGCCTGACCGTTCTTTGCATGGCCGACGAAGCCTCTGGAAGGAGAATTCCTTTTGCATTTCTCGAAGACATTCACCAAAGATTTGTGAAGACTTACGCTCGTACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCCAACGATCCAAATGCAGATAGGCTGAACCGCTTAAAAGGTGAAATGAGTCAGGCAAGTTCCGAAAATTGTCTATTGGACTCTGTGAGGAACGTGATGATAGATAATATTGACAAAGTATTGGAGAGAGGTGACCGCTTGGCTTTGCTGGTCGAGAAAACTACAAATATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGTCGCTACAGAAACACCTTGTGGTGGAGAAACTTCAAACTTTCG

Protein sequence

MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTDGLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFSNDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNAVRFRRQSRRYRNTLWWRNFKLS

Homology

[Close]

BLAST of MS002411 vs. NCBI nr
Match: KAG7023495.1 (Vesicle-associated membrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.8 bits (961), Expect = 4.7e-100
Identity = 188/202 (93.07%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVAR HVVLAEF ATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIK+TD
Sbjct: 1   MGILYGMVAREHVVLAEFSATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDH+S
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQASS+N L++SVR+VM+DNI+KVLERGDRLALLV+KTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQASSKNYLINSVRSVMVDNIEKVLERGDRLALLVDKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWWRN KL+
Sbjct: 181 VRFRRQSRRYRNTLWWRNLKLT 202

[Close]

BLAST of MS002411 vs. NCBI nr
Match: XP_022134688.1 (vesicle-associated membrane protein 711-like [Momordica charantia])

HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99
Identity = 191/202 (94.55%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQ MDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQHMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWWRNFKLS
Sbjct: 181 VRFRRQSRRYRNTLWWRNFKLS 192

[Close]

BLAST of MS002411 vs. NCBI nr
Match: XP_016899833.1 (PREDICTED: vesicle-associated membrane protein 711-like [Cucumis melo])

HSP 1 Score: 362.1 bits (928), Expect = 3.2e-96
Identity = 187/202 (92.57%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARG VVLAEF ATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGPVVLAEFSATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VRNVM+DNI+KVLERGDRLALLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRNVMMDNIEKVLERGDRLALLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWWRNFKL+
Sbjct: 181 VRFRRQSRRYRNTLWWRNFKLT 192

[Close]

BLAST of MS002411 vs. NCBI nr
Match: XP_038880539.1 (vesicle-associated membrane protein 711-like [Benincasa hispida])

HSP 1 Score: 360.9 bits (925), Expect = 7.1e-96
Identity = 185/202 (91.58%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARGHVVLAEF ATQTNAS IARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGHVVLAEFSATQTNASTIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEM+Q          VRNVMIDNI+KVLERGDRLALLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMNQ----------VRNVMIDNIEKVLERGDRLALLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           V FRRQSRRYRNT+WWRNFKL+
Sbjct: 181 VGFRRQSRRYRNTMWWRNFKLT 192

[Close]

BLAST of MS002411 vs. NCBI nr
Match: XP_004150529.1 (vesicle-associated membrane protein 713 [Cucumis sativus] >KGN65117.1 hypothetical protein Csa_004548 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 4.6e-95
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARG VVLAEF +TQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGPVVLAEFSSTQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VRNVM+DNI+KVLERGDRL LLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRNVMMDNIEKVLERGDRLTLLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWW+NFKL+
Sbjct: 181 VRFRRQSRRYRNTLWWKNFKLT 192

[Close]

BLAST of MS002411 vs. ExPASy Swiss-Prot
Match: Q9LFP1 (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana OX=3702 GN=VAMP713 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.6e-74
Identity = 138/202 (68.32%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M I++ +VARG VVL+EF AT TNAS+I++QI+EK+   D DS+ SYS DRYIFH+K+TD
Sbjct: 1   MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADE +GR IPFAFL+DIHQRFVKTY R I SA AY+MNDEFSRVLSQQM+ +S
Sbjct: 61  GLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADR++R+KGEMSQ          VRNVMI+NIDKVL+RG+RL LLV+KT N+QGN 
Sbjct: 121 NDPNADRMSRIKGEMSQ----------VRNVMIENIDKVLDRGERLELLVDKTENMQGNT 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
            RFR+Q+RRYR  +WWRN KL+
Sbjct: 181 FRFRKQARRYRTIMWWRNVKLT 192

[Close]

BLAST of MS002411 vs. ExPASy Swiss-Prot
Match: O49377 (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana OX=3702 GN=VAMP711 PE=1 SV=2)

HSP 1 Score: 278.9 bits (712), Expect = 4.6e-74
Identity = 138/202 (68.32%), Postives = 170/202 (84.16%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M ILY +VARG VVL+EF AT TNAS IA+QI+EK+  GD+DSN SYS DRY+FH+K+TD
Sbjct: 1   MAILYALVARGTVVLSEFTATSTNASTIAKQILEKV-PGDNDSNVSYSQDRYVFHVKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMA+E +GRRIPFAFLEDIHQRFV+TY R + +A AYAMN+EFSRVLSQQ+D++S
Sbjct: 61  GLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADR+NR+KGEM+Q          VR VMI+NIDKVL+RG+RL LLV+KT N+QGN 
Sbjct: 121 NDPNADRINRIKGEMNQ----------VRGVMIENIDKVLDRGERLELLVDKTANMQGNT 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
            RFR+Q+RR+R+ +WWRN KL+
Sbjct: 181 FRFRKQARRFRSNVWWRNCKLT 191

[Close]

BLAST of MS002411 vs. ExPASy Swiss-Prot
Match: Q9SIQ9 (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana OX=3702 GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 8.2e-71
Identity = 133/202 (65.84%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M ILY +VARG VVLAE   T TNAS IA+QI+EK+  G+ DS+ SYS DRY+FH+K+TD
Sbjct: 1   MSILYALVARGTVVLAELSTTSTNASTIAKQILEKI-PGNGDSHVSYSQDRYVFHVKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADE +GRRIPF+FLEDIHQRFV+TY R I SA AYAMNDEFSRVL+QQ++++S
Sbjct: 61  GLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNAD ++R+KGEM+Q          VR+VMI+NID +L+RG+RL LLV+KT N+QGN 
Sbjct: 121 NDPNADTISRIKGEMNQ----------VRDVMIENIDNILDRGERLELLVDKTANMQGNT 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
            RFR+Q+RR+ NT+WWRN KL+
Sbjct: 181 FRFRKQTRRFNNTVWWRNCKLT 191

[Close]

BLAST of MS002411 vs. ExPASy Swiss-Prot
Match: Q9FMR5 (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana OX=3702 GN=VAMP714 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-55
Identity = 105/201 (52.24%), Postives = 146/201 (72.64%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M I+Y +VARG VVLAEF A   N  A+ R+I+EK+     D    +S DRYIFHI ++D
Sbjct: 1   MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLT LCMA++  GRR+PF++LE+IH RF+K Y +   +APAYAMNDEFSRVL QQM+ FS
Sbjct: 61  GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           ++P+ D LNR++GE+S+          +R+VM++NI+K++ERGDR+ LLV+KT  +Q ++
Sbjct: 121 SNPSVDTLNRVRGEVSE----------IRSVMVENIEKIMERGDRIELLVDKTATMQDSS 180

Query: 181 VRFRRQSRRYRNTLWWRNFKL 202
             FR+QS+R R  LW +N KL
Sbjct: 181 FHFRKQSKRLRRALWMKNAKL 191

[Close]

BLAST of MS002411 vs. ExPASy Swiss-Prot
Match: Q86AQ7 (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum OX=44689 GN=vamp7B PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36
Identity = 81/202 (40.10%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M I+Y +VARG  VLAEF +T  N   I R+I++ +    +D+  SY +++YIFH   +D
Sbjct: 1   MPIIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIP--PNDTKMSYVYEKYIFHYLVSD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
            LT LCMADE  GRRIPF FL+D+  RF   Y     +A AY MN +FSR L   MDH+S
Sbjct: 61  TLTYLCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNSDFSRTLENLMDHYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNI-DKVLERGDRLALLVEKTTNIQGN 180
           N    D ++R   E          +D V+N+++ +I  ++L+RG+++ +LVE+T  +   
Sbjct: 121 NTTRVDTMSRTMAE----------IDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQ 180

Query: 181 AVRFRRQSRRYRNTLWWRNFKL 202
           + +F++QS++ +  +WW+N KL
Sbjct: 181 SFKFKKQSKQLKCAMWWKNVKL 190

[Close]

BLAST of MS002411 vs. ExPASy TrEMBL
Match: A0A6J1C2Q2 (vesicle-associated membrane protein 711-like OS=Momordica charantia OX=3673 GN=LOC111006896 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 191/202 (94.55%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQ MDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQHMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWWRNFKLS
Sbjct: 181 VRFRRQSRRYRNTLWWRNFKLS 192

[Close]

BLAST of MS002411 vs. ExPASy TrEMBL
Match: A0A1S4DV36 (vesicle-associated membrane protein 711-like OS=Cucumis melo OX=3656 GN=LOC103487414 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 187/202 (92.57%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARG VVLAEF ATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGPVVLAEFSATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VRNVM+DNI+KVLERGDRLALLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRNVMMDNIEKVLERGDRLALLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWWRNFKL+
Sbjct: 181 VRFRRQSRRYRNTLWWRNFKLT 192

[Close]

BLAST of MS002411 vs. ExPASy TrEMBL
Match: A0A0A0LWB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226450 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARG VVLAEF +TQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGPVVLAEFSSTQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VRNVM+DNI+KVLERGDRL LLVEKTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRNVMMDNIEKVLERGDRLTLLVEKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWW+NFKL+
Sbjct: 181 VRFRRQSRRYRNTLWWKNFKLT 192

[Close]

BLAST of MS002411 vs. ExPASy TrEMBL
Match: A0A5D3C4W2 (Vesicle-associated membrane protein 711-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00620 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.5e-95
Identity = 183/204 (89.71%), Postives = 190/204 (93.14%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVARG VVLAEF ATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVARGPVVLAEFSATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120

Query: 121 NDPNADRLNRLK--GEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQG 180
           NDPNADRLNRLK   ++   ++  C    VRNVM+DNI+KVLERGDRLALLVEKTTNIQG
Sbjct: 121 NDPNADRLNRLKVIFKVLDNTNSRCCFPPVRNVMMDNIEKVLERGDRLALLVEKTTNIQG 180

Query: 181 NAVRFRRQSRRYRNTLWWRNFKLS 203
           NAVRFRRQSRRYRNTLWWRNFKL+
Sbjct: 181 NAVRFRRQSRRYRNTLWWRNFKLT 204

[Close]

BLAST of MS002411 vs. ExPASy TrEMBL
Match: A0A6J1H9Z9 (vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LOC111461457 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.4e-94
Identity = 182/202 (90.10%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           MGILYGMVAR HVVLAEF ATQTNASAIARQIMEKMKQG+DDSNASYSHDRYIFHIKKTD
Sbjct: 1   MGILYGMVAREHVVLAEFSATQTNASAIARQIMEKMKQGEDDSNASYSHDRYIFHIKKTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDH+S
Sbjct: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADRLNRLKGEMSQ          VR+VM+DNI+KVLERGDRLALLV+KTTNIQGNA
Sbjct: 121 NDPNADRLNRLKGEMSQ----------VRSVMVDNIEKVLERGDRLALLVDKTTNIQGNA 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
           VRFRRQSRRYRNTLWWRN KL+
Sbjct: 181 VRFRRQSRRYRNTLWWRNLKLT 192

[Close]

BLAST of MS002411 vs. TAIR 10
Match: AT5G11150.1 (vesicle-associated membrane protein 713 )

HSP 1 Score: 279.3 bits (713), Expect = 2.5e-75
Identity = 138/202 (68.32%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M I++ +VARG VVL+EF AT TNAS+I++QI+EK+   D DS+ SYS DRYIFH+K+TD
Sbjct: 1   MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADE +GR IPFAFL+DIHQRFVKTY R I SA AY+MNDEFSRVLSQQM+ +S
Sbjct: 61  GLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADR++R+KGEMSQ          VRNVMI+NIDKVL+RG+RL LLV+KT N+QGN 
Sbjct: 121 NDPNADRMSRIKGEMSQ----------VRNVMIENIDKVLDRGERLELLVDKTENMQGNT 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
            RFR+Q+RRYR  +WWRN KL+
Sbjct: 181 FRFRKQARRYRTIMWWRNVKLT 192

[Close]

BLAST of MS002411 vs. TAIR 10
Match: AT4G32150.1 (vesicle-associated membrane protein 711 )

HSP 1 Score: 278.9 bits (712), Expect = 3.3e-75
Identity = 138/202 (68.32%), Postives = 170/202 (84.16%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M ILY +VARG VVL+EF AT TNAS IA+QI+EK+  GD+DSN SYS DRY+FH+K+TD
Sbjct: 1   MAILYALVARGTVVLSEFTATSTNASTIAKQILEKV-PGDNDSNVSYSQDRYVFHVKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMA+E +GRRIPFAFLEDIHQRFV+TY R + +A AYAMN+EFSRVLSQQ+D++S
Sbjct: 61  GLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNADR+NR+KGEM+Q          VR VMI+NIDKVL+RG+RL LLV+KT N+QGN 
Sbjct: 121 NDPNADRINRIKGEMNQ----------VRGVMIENIDKVLDRGERLELLVDKTANMQGNT 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
            RFR+Q+RR+R+ +WWRN KL+
Sbjct: 181 FRFRKQARRFRSNVWWRNCKLT 191

[Close]

BLAST of MS002411 vs. TAIR 10
Match: AT2G25340.1 (vesicle-associated membrane protein 712 )

HSP 1 Score: 268.1 bits (684), Expect = 5.8e-72
Identity = 133/202 (65.84%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M ILY +VARG VVLAE   T TNAS IA+QI+EK+  G+ DS+ SYS DRY+FH+K+TD
Sbjct: 1   MSILYALVARGTVVLAELSTTSTNASTIAKQILEKI-PGNGDSHVSYSQDRYVFHVKRTD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLTVLCMADE +GRRIPF+FLEDIHQRFV+TY R I SA AYAMNDEFSRVL+QQ++++S
Sbjct: 61  GLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           NDPNAD ++R+KGEM+Q          VR+VMI+NID +L+RG+RL LLV+KT N+QGN 
Sbjct: 121 NDPNADTISRIKGEMNQ----------VRDVMIENIDNILDRGERLELLVDKTANMQGNT 180

Query: 181 VRFRRQSRRYRNTLWWRNFKLS 203
            RFR+Q+RR+ NT+WWRN KL+
Sbjct: 181 FRFRKQTRRFNNTVWWRNCKLT 191

[Close]

BLAST of MS002411 vs. TAIR 10
Match: AT5G22360.1 (vesicle-associated membrane protein 714 )

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-56
Identity = 105/201 (52.24%), Postives = 146/201 (72.64%), Query Frame = 0


Query: 1   MGILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTD 60
           M I+Y +VARG VVLAEF A   N  A+ R+I+EK+     D    +S DRYIFHI ++D
Sbjct: 1   MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60

Query: 61  GLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFS 120
           GLT LCMA++  GRR+PF++LE+IH RF+K Y +   +APAYAMNDEFSRVL QQM+ FS
Sbjct: 61  GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFS 120

Query: 121 NDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLERGDRLALLVEKTTNIQGNA 180
           ++P+ D LNR++GE+S+          +R+VM++NI+K++ERGDR+ LLV+KT  +Q ++
Sbjct: 121 SNPSVDTLNRVRGEVSE----------IRSVMVENIEKIMERGDRIELLVDKTATMQDSS 180

Query: 181 VRFRRQSRRYRNTLWWRNFKL 202
             FR+QS+R R  LW +N KL
Sbjct: 181 FHFRKQSKRLRRALWMKNAKL 191

[Close]

BLAST of MS002411 vs. TAIR 10
Match: AT3G54300.1 (vesicle-associated membrane protein 727 )

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-26
Identity = 72/220 (32.73%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 2   GILYGMVARGHVVLAEFCATQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTDG 61
           G++Y  VA+G VVLAE      N S IA Q ++K+    + S  +YS D + F+    +G
Sbjct: 5   GLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLP--TNSSKYTYSCDGHTFNFLVDNG 64

Query: 62  LTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILS--------------------APA 121
              L +ADE++GR +PF FLE + + F K Y  +I +                    + A
Sbjct: 65  FVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVA 124

Query: 122 YAMNDEFSRVLSQQMDHFSNDPNADRLNRLKGEMSQASSENCLLDSVRNVMIDNIDKVLE 181
           Y ++ EF  +L + M +  + P          EMS+ S     +  V+ +M+DNI+KVL+
Sbjct: 125 YNLDREFGPILKEHMQYCMSHPE---------EMSKLSKLKAQITEVKGIMMDNIEKVLD 184

Query: 182 RGDRLALLVEKTTNIQGNAVRFRRQSRRYRNTLWWRNFKL 202
           RG+++ LLV+KT N+Q  A  F+RQ R+ R  +W ++ ++
Sbjct: 185 RGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQM 213

The following BLAST results are available for this feature:

BLAST of MS002411 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023495.1	4.7e-100	93.07	Vesicle-associated membrane protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022134688.1	4.0e-99	94.55	vesicle-associated membrane protein 711-like [Momordica charantia]	[more]
XP_016899833.1	3.2e-96	92.57	PREDICTED: vesicle-associated membrane protein 711-like [Cucumis melo]	[more]
XP_038880539.1	7.1e-96	91.58	vesicle-associated membrane protein 711-like [Benincasa hispida]	[more]
XP_004150529.1	4.6e-95	91.09	vesicle-associated membrane protein 713 [Cucumis sativus] >KGN65117.1 hypothetic...	[more]

BLAST of MS002411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFP1	3.6e-74	68.32	Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana OX=3702 GN=VAMP7...	[more]
O49377	4.6e-74	68.32	Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana OX=3702 GN=VAMP7...	[more]
Q9SIQ9	8.2e-71	65.84	Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana OX=3702 GN=VAMP7...	[more]
Q9FMR5	3.7e-55	52.24	Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana OX=3702 GN=VAMP7...	[more]
Q86AQ7	1.0e-36	40.10	Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum OX=44689 GN=v...	[more]

BLAST of MS002411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2Q2	1.9e-99	94.55	vesicle-associated membrane protein 711-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S4DV36	1.5e-96	92.57	vesicle-associated membrane protein 711-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0LWB2	2.2e-95	91.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226450 PE=3 SV=1	[more]
A0A5D3C4W2	6.5e-95	89.71	Vesicle-associated membrane protein 711-like protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1H9Z9	1.4e-94	90.10	vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS002411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11150.1	2.5e-75	68.32	vesicle-associated membrane protein 713	[more]
AT4G32150.1	3.3e-75	68.32	vesicle-associated membrane protein 711	[more]
AT2G25340.1	5.8e-72	65.84	vesicle-associated membrane protein 712	[more]
AT5G22360.1	2.6e-56	52.24	vesicle-associated membrane protein 714	[more]
AT3G54300.1	2.8e-26	32.73	vesicle-associated membrane protein 727	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001388	Synaptobrevin	PRINTS	PR00219	SYNAPTOBREVN	coord: 162..181 score: 32.84 coord: 142..161 score: 39.05
IPR001388	Synaptobrevin	PFAM	PF00957	Synaptobrevin	coord: 145..201 e-value: 7.1E-20 score: 70.6
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 28..111 e-value: 1.9E-25 score: 100.6
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 29..109 e-value: 4.1E-24 score: 84.4
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 7..112 score: 29.480984
IPR010908	Longin domain	CDD	cd14824	Longin	coord: 4..119 e-value: 5.65269E-33 score: 113.12
None	No IPR available	GENE3D	3.30.450.50	Longin domain	coord: 1..124 e-value: 4.5E-38 score: 132.4
None	No IPR available	GENE3D	1.20.5.110		coord: 125..201 e-value: 7.3E-18 score: 66.3
None	No IPR available	PANTHER	PTHR21136:SF181	LONGIN-LIKE DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..201
None	No IPR available	PANTHER	PTHR21136	SNARE PROTEINS	coord: 1..201
None	No IPR available	CDD	cd15843	R-SNARE	coord: 126..180 e-value: 3.28541E-12 score: 57.1267
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 145..199
IPR042855	v-SNARE, coiled-coil homology domain	PROSITE	PS50892	V_SNARE	coord: 137..197 score: 15.362082
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 3..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002411.1	MS002411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane