MS002393 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCTGAGGAGTGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGACGGACTGTTAGCTAGTGTGTATCATCTTACGAGA CAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCTGAGGAGTGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGACGGACTGTTAGCTAGTGTGTATCATCTTACGAGA CAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCTGAGGAGTGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGACGGACTGTTAGCTAGTGTGTATCATCTTACGAGA QGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPDGLLASVYHLTR Homology
BLAST of MS002393 vs. NCBI nr
Match: AHM88883.1 (NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >QIT04053.1 NADH dehydrogenase subunit J [Luffa aegyptiaca] >QKX48476.1 NADH-plastoquinone oxidoreductase subunit J [Luffa acutangula] >AHM88941.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >AHM88999.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria]) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. NCBI nr
Match: YP_009325992.1 (NADH dehydrogenase subunit J [Citrullus lanatus] >YP_009348034.1 NADH dehydrogenase subunit J [Citrullus mucosospermus] >YP_009431560.1 NADH dehydrogenase subunit J [Citrullus amarus] >APW82464.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APD52483.1 NADH dehydrogenase subunit J [Citrullus lanatus] >APW82549.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APW82634.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APW82719.1 NADH dehydrogenase subunit J [Citrullus mucosospermus]) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. NCBI nr
Match: YP_009526305.1 (NADH dehydrogenase subunit J [Hemsleya lijiangensis] >YP_010119737.1 NADH-plastoquinone oxidoreductase subunit J [Hemsleya zhejiangensis] >AXU40434.1 NADH-plastoquinone oxidoreductase subunit J [Gomphogyne cissiformis var. villosa] >AXU40521.1 NADH dehydrogenase subunit J [Hemsleya lijiangensis] >QRC26913.1 NADH-plastoquinone oxidoreductase subunit J [Hemsleya zhejiangensis]) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. NCBI nr
Match: YP_009236283.1 (NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317389.1 NADH dehydrogenase subunit J [Coccinia grandis] >YP_009420797.1 NADH dehydrogenase subunit J [Citrullus colocynthis] >YP_009430630.1 NADH dehydrogenase subunit J [Gynostemma cardiospermum] >YP_009431645.1 NADH dehydrogenase subunit J [Citrullus rehmii] >YP_009439807.1 NADH dehydrogenase subunit J [Gynostemma laxiflorum] >YP_009439894.1 NADH dehydrogenase subunit J [Gynostemma caulopterum] >YP_009440160.1 NADH dehydrogenase subunit J [Gynostemma longipes] >YP_009440247.1 NADH dehydrogenase subunit J [Gynostemma burmanicum (nom. inval.)] >YP_009440334.1 NADH dehydrogenase subunit J [Gynostemma pubescens] >YP_009447453.1 NADH dehydrogenase subunit J [Cucurbita maxima] >YP_009447538.1 NADH dehydrogenase subunit J [Cucurbita moschata] >YP_009456064.1 NADH dehydrogenase subunit J [Momordica charantia] >YP_009456149.1 NADH dehydrogenase subunit J [Lagenaria siceraria] >YP_009468864.1 NADH dehydrogenase subunit J [Gynostemma compressum] >YP_009505083.1 NADH dehydrogenase subunit J [Cucurbita pepo] >YP_009751825.1 NADH dehydrogenase subunit J [Indofevillea khasiana] >YP_009751993.1 NADH dehydrogenase subunit J [Cionosicys macranthus] >YP_009752078.1 NADH dehydrogenase subunit J [Dendrosicyos socotranus] >YP_009752669.1 NADH dehydrogenase subunit J [Ampelosycios humblotii] >YP_009752753.1 NADH dehydrogenase subunit J [Cyclantheropsis parviflora] >YP_009752838.1 NADH dehydrogenase subunit J [Baijiania yunnanensis] >YP_009753007.1 NADH dehydrogenase subunit J [Gerrardanthus macrorhizus] >YP_009753092.1 NADH dehydrogenase subunit J [Corallocarpus boehmii] >YP_009753261.1 NADH dehydrogenase subunit J [Nothoalsomitra suberosa] >YP_010015142.1 NADH dehydrogenase subunit J [Gynostemma yixingense] >YP_010131097.1 NADH-plastoquinone oxidoreductase subunit J [Benincasa hispida] >ALO21769.1 NdhJ [Cucurbita argyrosperma] >ALO21826.1 NdhJ [Cucurbita argyrosperma var. palmeri] >ALO21847.1 NdhJ [Cucurbita argyrosperma subsp. sororia] >ALO22065.1 NdhJ [Cucurbita ecuadorensis] >ALO22136.1 NdhJ [Cucurbita ficifolia] >ALO22158.1 NdhJ [Cucurbita foetidissima] >ALO22241.1 NdhJ [Cucurbita lundelliana] >ALO22331.1 NdhJ [Cucurbita maxima subsp. andreana] >ALO22449.1 NdhJ [Cucurbita okeechobeensis] >ALO22487.1 NdhJ [Cucurbita okeechobeensis subsp. martinezii] >ALO22587.1 NdhJ [Cucurbita pepo subsp. fraterna] >ALO22650.1 NdhJ [Cucurbita pepo subsp. ovifera] >ALO22728.1 NdhJ [Cucurbita pepo var. ozarkana] >ALO22760.1 NdhJ [Cucurbita pepo subsp. pepo] >ALO22812.1 NdhJ [Cucurbita pepo var. texana] >ALO22928.1 NdhJ [Cucurbita pedatifolia] >QNM38534.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria var. microcarpa] >QZL38596.1 NADH dehydrogenase subunit J [Citrullus naudinianus] >QZL38684.1 NADH dehydrogenase subunit J [Citrullus ecirrhosus]) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. NCBI nr
Match: YP_009752330.1 (NADH dehydrogenase subunit J [Bryonia marmorata] >QIT04304.1 NADH dehydrogenase subunit J [Bryonia marmorata]) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. ExPASy Swiss-Prot
Match: Q4VZH2 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhJ PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.8e-36 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. ExPASy Swiss-Prot
Match: B1A938 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649 GN=ndhJ PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 3.0e-36 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of MS002393 vs. ExPASy Swiss-Prot
Match: B0Z4L4 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhJ PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 5.2e-36 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of MS002393 vs. ExPASy Swiss-Prot
Match: B0Z4U8 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhJ PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 5.2e-36 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of MS002393 vs. ExPASy Swiss-Prot
Match: Q9MTP3 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhJ PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 5.2e-36 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of MS002393 vs. ExPASy TrEMBL
Match: A0A109WWM6 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=ndhJ PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. ExPASy TrEMBL
Match: A0A1P8LDY6 (NADH-quinone oxidoreductase subunit C OS=Citrullus mucosospermus OX=519315 GN=ndhJ PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. ExPASy TrEMBL
Match: A0A6H0EQB7 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Indofevillea khasiana OX=383665 GN=ndhJ PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. ExPASy TrEMBL
Match: A0A2Z2CGF1 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Coccinia grandis OX=387127 GN=ndhJ PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. ExPASy TrEMBL
Match: X2F723 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Lagenaria siceraria OX=3668 GN=ndhJ PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS002393 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J ) HSP 1 Score: 143.3 bits (360), Expect = 7.7e-35 Identity = 66/72 (91.67%), Postives = 67/72 (93.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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