MS002386 (gene) Bitter gourd (TR) v1

Overview


Name	MS002386
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic
Location	scaffold30: 4517087 .. 4518340 (-)
RNA-Seq Expression	MS002386
Synteny	MS002386

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACTCCCGCCATTAAACCTCTGCTTCCACTTTCTCCTTCCATTAATCAGCCATCTAGGTCACCCGCTTCATGGAGTATTTGCAAACCCAACTTCCCTCGCCACCGCCGCCAAGTTGCGGCCTCCGTCGCCTTCAATCCGTCGGGAAATTTTGAACTCTCTTTGCAAGATGATGAAGATGGTACGCCTCCAACTTGTGCTTGAGTTTTATAATTTGTTCTGTATTTGTTTTTATCTGTGCATTACTTGTCTAGAAATCGCATTTTTCAATCATAACTCTGAGGGAAAAGGGGAAAATTGGGGAAAATGGGGAAAATTCTTCCAAATGACCATTGGATGAATATCGTAGGTCGATTGTTTGAGTAGCCATATAATTAGTCAATGAAAGAGAATTCCTCTGTTCTTTGATGCTCGGCTTCCATTTTCTGAATGATGAATGGTGGTTTATTCTTTCCTATCTTTTGAGAAGGAAAATATATCCGTTAGGGCTGATTTTACAAACATTATCTAGTTCTTTCTTGCCCTAGAAATGTAGTAGCAACTAGCAATAGAAAAGGGAGAACAATTGTGGTCATATCTGTGGGAGTTGTTGAATTATAAACACAGATTCTCCTAAAGTTGCACCTCCAATGCACCCACTGAAGGGCGATTCGGCGTGGTTATAGACAACGATACAATTCGCCGTCTAGACTTATCCCCATTTCAGAAAACAACTGGAATAATCTCACCTTTATCTAGTAAGTTTTGGGGTGTTGATCTGTTTATATCATTGTTTTGAGATTAATTCTGTGACCCCAAGTGATTTCTTTTTCTAGTACTGTTACAGCTGAGCCAAAACAGTTTCTAGAGCGTACAATTGGTTTTACCATCAACTATACCCGAGAAGATCCTTACGATCGACGAGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTACCCATGGCTACCCGTCCTGTTAGACTGGAGAGCTGGGGAACTCGCCGCTATGCAGCCATGCTCGTCCCTCACCAGGTGTTGCTAGTGATGAAATGTTATGAAAATGTTCACATTAAGGACTTATTTTTGGGATCCTTTTTGGTTGCAGATAAGTATGAGAATGGGGATTGTATTCAATCCTGAGGCTTTGGAGTCGTTTGTGATGAACAAAGTTTTCATTGTATATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACAAGTAATATGGCCAGGATGCTT

mRNA sequence

ATGACCACTCCCGCCATTAAACCTCTGCTTCCACTTTCTCCTTCCATTAATCAGCCATCTAGGTCACCCGCTTCATGGAGTATTTGCAAACCCAACTTCCCTCGCCACCGCCGCCAAGTTGCGGCCTCCGTCGCCTTCAATCCGTCGGGAAATTTTGAACTCTCTTTGCAAGATGATGAAGATGATTCTCCTAAAGTTGCACCTCCAATGCCCACTGAAGGGCGATTCGGCGTGGTTATAGACAACGATACAATTCGCCGTCTAGACTTATCCCCATTTCAGAAAACAACTGGAATAATCTCACCTTTATCTACTGAGCCAAAACAGTTTCTAGAGCGTACAATTGGTTTTACCATCAACTATACCCGAGAAGATCCTTACGATCGACGAGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTACCCATGGCTACCCGTCCTGTTAGACTGGAGAGCTGGGGAACTCCGCTATGCAGCCATGCTCGTCCCTCACCAGATAAGTATGAGAATGGGGATTGTATTCAATCCTGAGGCTTTGGAGTCGTTTGTGATGAACAAAGTTTTCATTGTATATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACAAGTAATATGGCCAGGATGCTT

Coding sequence (CDS)

ATGACCACTCCCGCCATTAAACCTCTGCTTCCACTTTCTCCTTCCATTAATCAGCCATCTAGGTCACCCGCTTCATGGAGTATTTGCAAACCCAACTTCCCTCGCCACCGCCGCCAAGTTGCGGCCTCCGTCGCCTTCAATCCGTCGGGAAATTTTGAACTCTCTTTGCAAGATGATGAAGATGATTCTCCTAAAGTTGCACCTCCAATGCCCACTGAAGGGCGATTCGGCGTGGTTATAGACAACGATACAATTCGCCGTCTAGACTTATCCCCATTTCAGAAAACAACTGGAATAATCTCACCTTTATCTACTGAGCCAAAACAGTTTCTAGAGCGTACAATTGGTTTTACCATCAACTATACCCGAGAAGATCCTTACGATCGACGAGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTACCCATGGCTACCCGTCCTGTTAGACTGGAGAGCTGGGGAACTCCGCTATGCAGCCATGCTCGTCCCTCACCAGATAAGTATGAGAATGGGGATTGTATTCAATCCTGAGGCTTTGGAGTCGTTTGTGATGAACAAAGTTTTCATTGTATATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACAAGTAATATGGCCAGGATGCTT

Protein sequence

MTTPAIKPLLPLSPSINQPSRSPASWSICKPNFPRHRRQVAASVAFNPSGNFELSLQDDEDDSPKVAPPMPTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELRYAAMLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML

Homology

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BLAST of MS002386 vs. NCBI nr
Match: XP_022135296.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Momordica charantia])

HSP 1 Score: 431.4 bits (1108), Expect = 4.7e-117
Identity = 213/223 (95.52%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKPNFPRHRRQVAASVAFNPSGNFELSLQDDE 60
           MTTPAIKPLLPLSPSINQPSRSPASWS C+P FPRHRRQVAASVAFNPSGNFELSLQDDE
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE 60

Query: 61  DDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120
           DDSPKVAPPM PT+GRF VVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI
Sbjct: 61  DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120

Query: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLVPHQISMRM 180
           NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL RYAAMLVPHQISMRM
Sbjct: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM 180

Query: 181 GIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           GIVFNPEALE FVMNKVF VYSWLKQHDIPKPRLKT NMARML
Sbjct: 181 GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARML 223

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BLAST of MS002386 vs. NCBI nr
Match: XP_038876902.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 7.0e-105
Identity = 197/234 (84.19%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICK------PNFP-----RHRRQVAASVAFNPS 60
           M+T AIKP LPL PS N PSRSP SWS C+      P+FP     RHRRQV+ASVAFNPS
Sbjct: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           GNF+LSLQDD+DDSPKVAPPM PTEGRF VVIDND IRRLDLS FQKTTGIISPL+TEPK
Sbjct: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL RYAA
Sbjct: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           ML+PHQISMRMGIVFNPEALE FVM KVFIVYSWLK+H+IPKPRLKT+NMARML
Sbjct: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARML 234

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BLAST of MS002386 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104
Identity = 196/234 (83.76%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKP-----------NFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWS C+P           +  R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDSPKV+PPM PTEGRF VVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGEL RYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           MLVPHQISMRMGIVFNPEALE FVM KVFIVYSWLK+HDIPKPRLKT+NMARML
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARML 234

[Close]

BLAST of MS002386 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 196/234 (83.76%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKP-----------NFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWS C+P              R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDS KV+PPM PTEGRF VVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGEL RYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           MLVPHQISMRMGIVFNPEALE FVM KVFIVYSWLKQHDIPKPRLKT+NMARML
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARML 234

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BLAST of MS002386 vs. NCBI nr
Match: XP_008443914.1 (PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 195/231 (84.42%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKPNFP--------RHRRQVAASVAFNPSGNF 60
           M+TP IKP LPLSPS N PSRSP SWS  +P  P        RHR Q++ASVAFNPSGNF
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60

Query: 61  ELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFL 120
           +LS QDD+DDSPKVAPPM PTEGRF VVIDND IR LDLS FQKTTGIISPL+TEPKQFL
Sbjct: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120

Query: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLV 180
           ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL RYAAMLV
Sbjct: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180

Query: 181 PHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           PHQISMRMGIVFNPEALE FVM KVFIVYSWLKQHDIPKPRLK +NMARML
Sbjct: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARML 231

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BLAST of MS002386 vs. ExPASy Swiss-Prot
Match: O82258 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-78
Identity = 146/215 (67.91%), Postives = 171/215 (79.53%), Query Frame = 0


Query: 12  LSPSINQPSRSPASWSICKPNFPRHRRQVAASVAFNPSGNFELSLQDDEDDSPKVAPPM- 71
           L P +  P+   A W + K    R    VA SVAFNPSGNF++S  +++ DS KV PPM 
Sbjct: 20  LFPVVQLPALETAGWCVRK----RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMP 79

Query: 72  PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLS---TEPKQFLERTIGFTINYTREDPY 131
           PT GR+ VVIDND+I RLDLSPFQ+  GI SP      EPK++L+RTIGFTINY REDP 
Sbjct: 80  PTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPG 139

Query: 132 DRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLVPHQISMRMGIVFNPEA 191
           D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGEL RYAAMLVPHQ+S+RMG+VFNPEA
Sbjct: 140 DPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEA 199

Query: 192 LESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           LE FVMNKVF+VY WLK+H +PKPRLKTS+MARML
Sbjct: 200 LELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARML 230

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BLAST of MS002386 vs. ExPASy TrEMBL
Match: A0A6J1C097 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007292 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 213/223 (95.52%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKPNFPRHRRQVAASVAFNPSGNFELSLQDDE 60
           MTTPAIKPLLPLSPSINQPSRSPASWS C+P FPRHRRQVAASVAFNPSGNFELSLQDDE
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE 60

Query: 61  DDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120
           DDSPKVAPPM PT+GRF VVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI
Sbjct: 61  DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120

Query: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLVPHQISMRM 180
           NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL RYAAMLVPHQISMRM
Sbjct: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM 180

Query: 181 GIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           GIVFNPEALE FVMNKVF VYSWLKQHDIPKPRLKT NMARML
Sbjct: 181 GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARML 223

[Close]

BLAST of MS002386 vs. ExPASy TrEMBL
Match: A0A6J1JFH1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485264 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 196/234 (83.76%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKP-----------NFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWS C+P           +  R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDSPKV+PPM PTEGRF VVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGEL RYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           MLVPHQISMRMGIVFNPEALE FVM KVFIVYSWLK+HDIPKPRLKT+NMARML
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARML 234

[Close]

BLAST of MS002386 vs. ExPASy TrEMBL
Match: A0A6J1E1R8 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430041 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.4e-104
Identity = 196/234 (83.76%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKP-----------NFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWS C+P              R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDS KV+PPM PTEGRF VVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGEL RYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           MLVPHQISMRMGIVFNPEALE FVM KVFIVYSWLKQHDIPKPRLKT+NMARML
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARML 234

[Close]

BLAST of MS002386 vs. ExPASy TrEMBL
Match: A0A1S3B982 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 195/231 (84.42%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKPNFP--------RHRRQVAASVAFNPSGNF 60
           M+TP IKP LPLSPS N PSRSP SWS  +P  P        RHR Q++ASVAFNPSGNF
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60

Query: 61  ELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFL 120
           +LS QDD+DDSPKVAPPM PTEGRF VVIDND IR LDLS FQKTTGIISPL+TEPKQFL
Sbjct: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120

Query: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLV 180
           ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL RYAAMLV
Sbjct: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180

Query: 181 PHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           PHQISMRMGIVFNPEALE FVM KVFIVYSWLKQHDIPKPRLK +NMARML
Sbjct: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARML 231

[Close]

BLAST of MS002386 vs. ExPASy TrEMBL
Match: A0A0A0LTF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.9e-101
Identity = 190/234 (81.20%), Postives = 200/234 (85.47%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSICKP-----------NFPRHRRQVAASVAFNPS 60
           M+TP IKP  PLSPS N PSRSP SWS  +P              RHRRQ++ASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           GNF+LS QDD+DDS KVAPPM PTEGRF VVIDND IR LDLS FQ TTGI+SPL+TEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL RYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           MLVPHQISMRMGIVFNPEALE FVM KVFIVYSWLKQHDIPKPRLK +NMARML
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARML 234

[Close]

BLAST of MS002386 vs. TAIR 10
Match: AT2G47910.1 (chlororespiratory reduction 6 )

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-79
Identity = 146/215 (67.91%), Postives = 171/215 (79.53%), Query Frame = 0


Query: 12  LSPSINQPSRSPASWSICKPNFPRHRRQVAASVAFNPSGNFELSLQDDEDDSPKVAPPM- 71
           L P +  P+   A W + K    R    VA SVAFNPSGNF++S  +++ DS KV PPM 
Sbjct: 20  LFPVVQLPALETAGWCVRK----RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMP 79

Query: 72  PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLS---TEPKQFLERTIGFTINYTREDPY 131
           PT GR+ VVIDND+I RLDLSPFQ+  GI SP      EPK++L+RTIGFTINY REDP 
Sbjct: 80  PTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPG 139

Query: 132 DRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLVPHQISMRMGIVFNPEA 191
           D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGEL RYAAMLVPHQ+S+RMG+VFNPEA
Sbjct: 140 DPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEA 199

Query: 192 LESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           LE FVMNKVF+VY WLK+H +PKPRLKTS+MARML
Sbjct: 200 LELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARML 230

[Close]

BLAST of MS002386 vs. TAIR 10
Match: AT2G47910.2 (chlororespiratory reduction 6 )

HSP 1 Score: 259.2 bits (661), Expect = 3.0e-69
Identity = 126/165 (76.36%), Postives = 143/165 (86.67%), Query Frame = 0


Query: 62  DSPKVAPPM-PTEGRFGVVIDNDTIRRLDLSPFQKTTGIISPLS---TEPKQFLERTIGF 121
           DS KV PPM PT GR+ VVIDND+I RLDLSPFQ+  GI SP      EPK++L+RTIGF
Sbjct: 18  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGF 77

Query: 122 TINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGEL-RYAAMLVPHQISM 181
           TINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGEL RYAAMLVPHQ+S+
Sbjct: 78  TINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSL 137

Query: 182 RMGIVFNPEALESFVMNKVFIVYSWLKQHDIPKPRLKTSNMARML 222
           RMG+VFNPEALE FVMNKVF+VY WLK+H +PKPRLKTS+MARML
Sbjct: 138 RMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARML 182

The following BLAST results are available for this feature:

BLAST of MS002386 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135296.1	4.7e-117	95.52	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Momordica charantia]	[more]
XP_038876902.1	7.0e-105	84.19	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida]	[more]
XP_022987841.1	3.5e-104	83.76	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]
XP_022921932.1	1.3e-103	83.76	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]
XP_008443914.1	2.2e-103	84.42	PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo]	[more]

BLAST of MS002386 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82258	2.0e-78	67.91	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of MS002386 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C097	2.3e-117	95.52	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3...	[more]
A0A6J1JFH1	1.7e-104	83.76	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita max...	[more]
A0A6J1E1R8	6.4e-104	83.76	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita mos...	[more]
A0A1S3B982	1.1e-103	84.42	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LTF0	3.9e-101	81.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]

BLAST of MS002386 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47910.1	1.4e-79	67.91	chlororespiratory reduction 6	[more]
AT2G47910.2	3.0e-69	76.36	chlororespiratory reduction 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 80..221 e-value: 7.7E-52 score: 174.9
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 14..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002386.1	MS002386.1	mRNA