MS002384 (gene) Bitter gourd (TR) v1

Overview


Name	MS002384
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic
Location	scaffold30: 4509036 .. 4510391 (-)
RNA-Seq Expression	MS002384
Synteny	MS002384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACTCCCGCCATTAAACCTCTGCTTCCACTTTCTCCTTCCATTAATCAGCCATCTAGGTCACCCGCTTCATGGAGTTTTTGCAGACCCACCTTCCCCCGGCACCGCCGACAAGTAGCGGCCTCCGTCGCCTTCAATCCGTCGGGAAATTTTGAACTCTCTTTGCAAGACGATGAAGATGGTAACGCCTCCAACTTGTGCTTCAGCTTTACAATTTGTTCTGTATTTGTTTTGATTTGTGCATTACTTGTCTAGAAATCGCATTTTTTCAATCAGAATTCTGAGGGAAGAGGGGGAAATTGGGGGAAATTCTCCCAAATGACCATCGGATGAATATTGTAGGTCGATTGTTTGAATAGCCATATAATTAGTCAATGAAAGAGAATTCCTCTGTTCTTTGGTAATCAGCTTCCATTTTCTGAATGATGAATGGTGATTTGTTCATCGATATCTTTTGAGAAAAGGAAAATATAACCGTTAGGGCTGATTTTACAAACATTATCTAGTTCTTTCTTGCCCTCAAAATGGAGTTGTAGCAACTAGCAATAGAAAAGGGAGAACAATTGTTGTCATATCTGAGGGAGTTGTTGAATTATAAACACAGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACCGATGGGCGATTCGACGTGGTTATAGACAACGATACAATTCGTCGTCTAGACTTATCCCCATTTCAGAAAACAACTGGAATAATCTCACCTTTATCTAGTAAGTTTTGGGGGTGTTGATCTGTTTATATCATTGTTTTGAGATTAATTCTGTGACCCCAAGTGAGTTCTTTTTCTAGTACTGTTACAGCTGAGCCAAAACAGTTTCTAGAGCGTACAATTGGTTTTACCATCAACTATACCCGAGAAGATCCTTACGATCGACGAGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTACCCATGGCTACCCGTCCTATTAGACTGGAGGGCTGGGGAACTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGGTAATGCCAGTGATGGAATGTTATGAAAATGTTCATATTAAGGAGTGTGAAAGGGAGGATTAGAGCACTGATACACATTAAGGACTTCTTTTTTTGGATCTTTTTTGGTTGCAGATAAGTATGAGAATGGGGATTGTGTTCAATCCTGAGGCTTTGGAGTTATTTGTGATGAACAAAGTTTTCACTGTATATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACTGGTAATATGGCTAGGATGCTTGGATTTGGAATTGGAGATGAACTTTTTGACCTGATAGATCAAAATCCAGTTGCTCCACCA

mRNA sequence

ATGACCACTCCCGCCATTAAACCTCTGCTTCCACTTTCTCCTTCCATTAATCAGCCATCTAGGTCACCCGCTTCATGGAGTTTTTGCAGACCCACCTTCCCCCGGCACCGCCGACAAGTAGCGGCCTCCGTCGCCTTCAATCCGTCGGGAAATTTTGAACTCTCTTTGCAAGACGATGAAGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACCGATGGGCGATTCGACGTGGTTATAGACAACGATACAATTCGTCGTCTAGACTTATCCCCATTTCAGAAAACAACTGGAATAATCTCACCTTTATCTACTGAGCCAAAACAGTTTCTAGAGCGTACAATTGGTTTTACCATCAACTATACCCGAGAAGATCCTTACGATCGACGAGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTACCCATGGCTACCCGTCCTATTAGACTGGAGGGCTGGGGAACTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGATAAGTATGAGAATGGGGATTGTGTTCAATCCTGAGGCTTTGGAGTTATTTGTGATGAACAAAGTTTTCACTGTATATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACTGGTAATATGGCTAGGATGCTTGGATTTGGAATTGGAGATGAACTTTTTGACCTGATAGATCAAAATCCAGTTGCTCCACCA

Coding sequence (CDS)

ATGACCACTCCCGCCATTAAACCTCTGCTTCCACTTTCTCCTTCCATTAATCAGCCATCTAGGTCACCCGCTTCATGGAGTTTTTGCAGACCCACCTTCCCCCGGCACCGCCGACAAGTAGCGGCCTCCGTCGCCTTCAATCCGTCGGGAAATTTTGAACTCTCTTTGCAAGACGATGAAGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACCGATGGGCGATTCGACGTGGTTATAGACAACGATACAATTCGTCGTCTAGACTTATCCCCATTTCAGAAAACAACTGGAATAATCTCACCTTTATCTACTGAGCCAAAACAGTTTCTAGAGCGTACAATTGGTTTTACCATCAACTATACCCGAGAAGATCCTTACGATCGACGAGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTACCCATGGCTACCCGTCCTATTAGACTGGAGGGCTGGGGAACTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGATAAGTATGAGAATGGGGATTGTGTTCAATCCTGAGGCTTTGGAGTTATTTGTGATGAACAAAGTTTTCACTGTATATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACTGGTAATATGGCTAGGATGCTTGGATTTGGAATTGGAGATGAACTTTTTGACCTGATAGATCAAAATCCAGTTGCTCCACCA

Protein sequence

MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPVAPP

Homology

[Close]

BLAST of MS002384 vs. NCBI nr
Match: XP_022135296.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Momordica charantia])

HSP 1 Score: 505.0 bits (1299), Expect = 3.7e-139
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE 60
           MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE 60

Query: 61  DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120
           DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI
Sbjct: 61  DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120

Query: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM 180
           NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM
Sbjct: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM 180

Query: 181 GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPV 240
           GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPV
Sbjct: 181 GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPV 240

Query: 241 APP 244
           APP
Sbjct: 241 APP 243

[Close]

BLAST of MS002384 vs. NCBI nr
Match: XP_038876902.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 451.1 bits (1159), Expect = 6.3e-123
Identity = 220/254 (86.61%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCR------PTFP-----RHRRQVAASVAFNPS 60
           M+T AIKP LPL PS N PSRSP SWSFCR      P+FP     RHRRQV+ASVAFNPS
Sbjct: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           GNF+LSLQDD+DDSPKVAPPMPPT+GRFDVVIDND IRRLDLS FQKTTGIISPL+TEPK
Sbjct: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVM KVF VYSWLK+H+IPKPRLKT NMARMLGFGIGD
Sbjct: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQNPVAPP 244
           ELFDLIDQ+PVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of MS002384 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-122
Identity = 220/254 (86.61%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWSFCRP           T  R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDS KV+PPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VYSWLKQHDIPKPRLKT NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQNPVAPP 244
           ELFDLIDQ+PVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of MS002384 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 447.2 bits (1149), Expect = 9.0e-122
Identity = 218/254 (85.83%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWSFCRP           +  R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDSPKV+PPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VYSWLK+HDIPKPRLKT NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQNPVAPP 244
           ELFDLIDQ+PV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of MS002384 vs. NCBI nr
Match: XP_008443914.1 (PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-121
Identity = 218/251 (86.85%), Postives = 226/251 (90.04%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFP--------RHRRQVAASVAFNPSGNF 60
           M+TP IKP LPLSPS N PSRSP SWSF RP  P        RHR Q++ASVAFNPSGNF
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60

Query: 61  ELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFL 120
           +LS QDD+DDSPKVAPPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPKQFL
Sbjct: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120

Query: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180
           ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV
Sbjct: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180

Query: 181 PHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELF 240
           PHQISMRMGIVFNPEALELFVM KVF VYSWLKQHDIPKPRLK  NMARMLGFGIGDELF
Sbjct: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF 240

Query: 241 DLIDQNPVAPP 244
           DLIDQ+PVAPP
Sbjct: 241 DLIDQHPVAPP 251

[Close]

BLAST of MS002384 vs. ExPASy Swiss-Prot
Match: O82258 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.6e-91
Identity = 161/230 (70.00%), Postives = 186/230 (80.87%), Query Frame = 0


Query: 12  LSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDEDDSPKVAPPMP 71
           L P +  P+   A W   +    R    VA SVAFNPSGNF++S  +++ DS KV PPMP
Sbjct: 20  LFPVVQLPALETAGWCVRK----RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMP 79

Query: 72  PTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLS---TEPKQFLERTIGFTINYTREDPY 131
           PT GR++VVIDND+I RLDLSPFQ+  GI SP      EPK++L+RTIGFTINY REDP 
Sbjct: 80  PTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPG 139

Query: 132 DRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEA 191
           D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAAMLVPHQ+S+RMG+VFNPEA
Sbjct: 140 DPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEA 199

Query: 192 LELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQN 239
           LELFVMNKVF VY WLK+H +PKPRLKT +MARMLGFGIGDELFDLID N
Sbjct: 200 LELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 245

[Close]

BLAST of MS002384 vs. ExPASy TrEMBL
Match: A0A6J1C097 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007292 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.8e-139
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE 60
           MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDE 60

Query: 61  DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120
           DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI
Sbjct: 61  DDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFLERTIGFTI 120

Query: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM 180
           NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM
Sbjct: 121 NYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRM 180

Query: 181 GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPV 240
           GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPV
Sbjct: 181 GIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQNPV 240

Query: 241 APP 244
           APP
Sbjct: 241 APP 243

[Close]

BLAST of MS002384 vs. ExPASy TrEMBL
Match: A0A6J1E1R8 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430041 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.5e-122
Identity = 220/254 (86.61%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWSFCRP           T  R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDS KV+PPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VYSWLKQHDIPKPRLKT NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQNPVAPP 244
           ELFDLIDQ+PVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of MS002384 vs. ExPASy TrEMBL
Match: A0A6J1JFH1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485264 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.4e-122
Identity = 218/254 (85.83%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS N PSRSP SWSFCRP           +  R RRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           G F+LSLQDDEDDSPKV+PPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VYSWLK+HDIPKPRLKT NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQNPVAPP 244
           ELFDLIDQ+PV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of MS002384 vs. ExPASy TrEMBL
Match: A0A1S3B982 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.7e-122
Identity = 218/251 (86.85%), Postives = 226/251 (90.04%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFP--------RHRRQVAASVAFNPSGNF 60
           M+TP IKP LPLSPS N PSRSP SWSF RP  P        RHR Q++ASVAFNPSGNF
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60

Query: 61  ELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPKQFL 120
           +LS QDD+DDSPKVAPPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL+TEPKQFL
Sbjct: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120

Query: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180
           ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV
Sbjct: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180

Query: 181 PHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELF 240
           PHQISMRMGIVFNPEALELFVM KVF VYSWLKQHDIPKPRLK  NMARMLGFGIGDELF
Sbjct: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF 240

Query: 241 DLIDQNPVAPP 244
           DLIDQ+PVAPP
Sbjct: 241 DLIDQHPVAPP 251

[Close]

BLAST of MS002384 vs. ExPASy TrEMBL
Match: A0A0A0LTF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.1e-120
Identity = 214/254 (84.25%), Postives = 224/254 (88.19%), Query Frame = 0


Query: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60
           M+TP IKP  PLSPS N PSRSP SWSF RP           T  RHRRQ++ASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120
           GNF+LS QDD+DDS KVAPPMPPT+GRFDVVIDND IR LDLS FQ TTGI+SPL+TEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VYSWLKQHDIPKPRLK  NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQNPVAPP 244
           ELFDLIDQ+PVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of MS002384 vs. TAIR 10
Match: AT2G47910.1 (chlororespiratory reduction 6 )

HSP 1 Score: 335.1 bits (858), Expect = 4.7e-92
Identity = 161/230 (70.00%), Postives = 186/230 (80.87%), Query Frame = 0


Query: 12  LSPSINQPSRSPASWSFCRPTFPRHRRQVAASVAFNPSGNFELSLQDDEDDSPKVAPPMP 71
           L P +  P+   A W   +    R    VA SVAFNPSGNF++S  +++ DS KV PPMP
Sbjct: 20  LFPVVQLPALETAGWCVRK----RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMP 79

Query: 72  PTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLS---TEPKQFLERTIGFTINYTREDPY 131
           PT GR++VVIDND+I RLDLSPFQ+  GI SP      EPK++L+RTIGFTINY REDP 
Sbjct: 80  PTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPG 139

Query: 132 DRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEA 191
           D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAAMLVPHQ+S+RMG+VFNPEA
Sbjct: 140 DPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEA 199

Query: 192 LELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQN 239
           LELFVMNKVF VY WLK+H +PKPRLKT +MARMLGFGIGDELFDLID N
Sbjct: 200 LELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 245

[Close]

BLAST of MS002384 vs. TAIR 10
Match: AT2G47910.2 (chlororespiratory reduction 6 )

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-82
Identity = 142/180 (78.89%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 62  DSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLS---TEPKQFLERTIGF 121
           DS KV PPMPPT GR++VVIDND+I RLDLSPFQ+  GI SP      EPK++L+RTIGF
Sbjct: 18  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGF 77

Query: 122 TINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISM 181
           TINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAAMLVPHQ+S+
Sbjct: 78  TINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSL 137

Query: 182 RMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLIDQN 239
           RMG+VFNPEALELFVMNKVF VY WLK+H +PKPRLKT +MARMLGFGIGDELFDLID N
Sbjct: 138 RMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 197

The following BLAST results are available for this feature:

BLAST of MS002384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135296.1	3.7e-139	100.00	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Momordica charantia]	[more]
XP_038876902.1	6.3e-123	86.61	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida]	[more]
XP_022921932.1	3.1e-122	86.61	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]
XP_022987841.1	9.0e-122	85.83	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]
XP_008443914.1	1.2e-121	86.85	PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo]	[more]

BLAST of MS002384 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82258	6.6e-91	70.00	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of MS002384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C097	1.8e-139	100.00	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3...	[more]
A0A6J1E1R8	1.5e-122	86.61	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita mos...	[more]
A0A6J1JFH1	4.4e-122	85.83	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita max...	[more]
A0A1S3B982	5.7e-122	86.85	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LTF0	9.1e-120	84.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]

BLAST of MS002384 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47910.1	4.7e-92	70.00	chlororespiratory reduction 6	[more]
AT2G47910.2	1.2e-82	78.89	chlororespiratory reduction 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 81..234 e-value: 3.8E-60 score: 201.9
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 13..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002384.1	MS002384.1	mRNA