Homology
BLAST of MS002377 vs. NCBI nr
Match:
XP_022135146.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Momordica charantia] >XP_022135147.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Momordica charantia] >XP_022135149.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Momordica charantia] >XP_022135150.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Momordica charantia])
HSP 1 Score: 1584.7 bits (4102), Expect = 0.0e+00
Identity = 787/789 (99.75%), Postives = 788/789 (99.87%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS
Sbjct: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KVVQILESLRKEP+IAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG
Sbjct: 61 KVVQILESLRKEPSIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH
Sbjct: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ
Sbjct: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM
Sbjct: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSS 360
KIDDAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSS
Sbjct: 301 KIDDAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSS 360
Query: 361 ILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQ 420
ILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQ
Sbjct: 361 ILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQ 420
Query: 421 IQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQ 480
IQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQ
Sbjct: 421 IQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQ 480
Query: 481 DLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAAN 540
DLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAAN
Sbjct: 481 DLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAAN 540
Query: 541 HKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYN 600
HKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYN
Sbjct: 541 HKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYN 600
Query: 601 KVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDR 660
KVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDR
Sbjct: 601 KVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDR 660
Query: 661 GRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYT 720
GRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYT
Sbjct: 661 GRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYT 720
Query: 721 VLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSK 780
VLIDAYCKMN LNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSK
Sbjct: 721 VLIDAYCKMNKLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSK 780
Query: 781 GILPDAHFS 790
GILPDAHFS
Sbjct: 781 GILPDAHFS 789
BLAST of MS002377 vs. NCBI nr
Match:
XP_023530445.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1285.8 bits (3326), Expect = 0.0e+00
Identity = 650/803 (80.95%), Postives = 712/803 (88.67%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KLNK+ L+LVKFASTAIA+L+ CSFS SD+EQ T S+ +TS+VQ NPS
Sbjct: 1 MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITTSFNTTSHVQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KV+QILESLR+EPN AFSFF KLEERGF+HNISTY ALIRILC WG+ERKLDSLFL+LIG
Sbjct: 61 KVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
S+K EFD+ DLLESLNQG+V+DGSFIRAYDALIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL+EHGK N+ALTVY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAIDIF+
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVVPNAFA +AYIEGLCTH CS +GYQLLQ WR + APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
+++ AE VF M KY VVPDAQTYGVLINGYCK L LQKALSLHS+MLSKGIKTNCVIVS
Sbjct: 301 EVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQMYSEVVNQFK FQ +GVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKI+EA MFE LKKNGIEPDTITYNVLAAGLSRNGLVSEV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
+DLL YM EH LREDP++ NLIIENLC+GGKVKEAT IFN+LEVKT D+YSAMINGYCAA
Sbjct: 481 KDLLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDSYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
N KDAYELFV+LSKKG +K SL RLVSSLCM+D+NDRAIKVIKRLS +N+EANEIVY
Sbjct: 541 NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
NKVIASLCR GNMKMAQ LFDCL+C GLTPDL TYT MINGYCKI+F REAY LLCDMK
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKI 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDI IYTVLLDGQFKT LRGLCSS+D RG KQE AF STIF EM+DMKIT DVI Y
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDA++L E+MVDQGI PDTVTYT+L+SG ++GDV+KA +LFDDMLS
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLS 780
Query: 781 KGILPDAHFSLLQSDILQTKENA 803
KG+LPDA F + S + +ENA
Sbjct: 781 KGVLPDAFFISVVSRYSKIQENA 803
BLAST of MS002377 vs. NCBI nr
Match:
XP_022932072.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 1285.0 bits (3324), Expect = 0.0e+00
Identity = 650/803 (80.95%), Postives = 713/803 (88.79%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KLNK+ L+LVKFASTAIA+L+ CSFS SD+EQ TIS +TS++Q NPS
Sbjct: 1 MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITISLNTTSHIQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KV+QILESLR+EPN AFSFF KLEERGF HNISTY ALIRILC WG+ERKLDSLFL+LIG
Sbjct: 61 KVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALIRILCSWGLERKLDSLFLNLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
S+K EFDV DLLESLNQG+V+DGSFIRAYD+LIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL+EHGK N+ALTVY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAIDIF+
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVVPNAFA +AYIEGLCTH CS +GYQLLQ WR + APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
+++ AE VF M KY VVP+AQTYGVLINGYCK L LQKALSLHS+MLSKGIKTNCVIVS
Sbjct: 301 EVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQMYSEVVNQFK FQ +GVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKI+EA MFE LKKNGIEPDTITYNVLAAGLSRNGLVSEV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
++LL YM EHGLREDP++ NLIIENLC+GGKVKEAT IFN+LEVKT DNYSAMINGYCAA
Sbjct: 481 KNLLDYMDEHGLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDNYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
N KDAYELFV+LSKKG +K SL RLVSSLCMED+NDRAIKVIKRLS +N+EANEIVY
Sbjct: 541 NRTKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMEDSNDRAIKVIKRLSIINVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
NKVIASLCR GNMKMAQ LFDCL+C GLTPDL TYTMMINGYCKI+F REAY LLCDMK+
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTMMINGYCKINFLREAYELLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDI IYTVLLDGQFKT LRGLCS++D RG KQE AF S IF EM+DMKIT DVI Y
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLRGAKQETAFTSRIFDEMEDMKITPDVICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDA++L E+MVDQGI PDTVTYT+L+SG ++GDV+KA +LFDDMLS
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVALFDDMLS 780
Query: 781 KGILPDAHFSLLQSDILQTKENA 803
KG+LPDA F + S + +ENA
Sbjct: 781 KGVLPDAFFISVVSRYSKIQENA 803
BLAST of MS002377 vs. NCBI nr
Match:
XP_022932065.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 646/789 (81.88%), Postives = 706/789 (89.48%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KLNK+ L+LVKFASTAIA+L+ CSFS SD+EQ TIS +TS++Q NPS
Sbjct: 1 MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITISLNTTSHIQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KV+QILESLR+EPN AFSFF KLEERGF HNISTY ALIRILC WG+ERKLDSLFL+LIG
Sbjct: 61 KVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALIRILCSWGLERKLDSLFLNLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
S+K EFDV DLLESLNQG+V+DGSFIRAYD+LIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL+EHGK N+ALTVY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAIDIF+
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVVPNAFA +AYIEGLCTH CS +GYQLLQ WR + APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
+++ AE VF M KY VVP+AQTYGVLINGYCK L LQKALSLHS+MLSKGIKTNCVIVS
Sbjct: 301 EVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQMYSEVVNQFK FQ +GVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKI+EA MFE LKKNGIEPDTITYNVLAAGLSRNGLVSEV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
++LL YM EHGLREDP++ NLIIENLC+GGKVKEAT IFN+LEVKT DNYSAMINGYCAA
Sbjct: 481 KNLLDYMDEHGLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDNYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
N KDAYELFV+LSKKG +K SL RLVSSLCMED+NDRAIKVIKRLS +N+EANEIVY
Sbjct: 541 NRTKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMEDSNDRAIKVIKRLSIINVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
NKVIASLCR GNMKMAQ LFDCL+C GLTPDL TYTMMINGYCKI+F REAY LLCDMK+
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTMMINGYCKINFLREAYELLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDI IYTVLLDGQFKT LRGLCS++D RG KQE AF S IF EM+DMKIT DVI Y
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLRGAKQETAFTSRIFDEMEDMKITPDVICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDA++L E+MVDQGI PDTVTYT+L+SG ++GDV+KA +LFDDMLS
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVALFDDMLS 780
Query: 781 KGILPDAHF 789
KG+LPDA F
Sbjct: 781 KGVLPDAFF 789
BLAST of MS002377 vs. NCBI nr
Match:
KAG6587854.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 646/789 (81.88%), Postives = 706/789 (89.48%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KLNK+ L+LVKFASTAIA+L+ CSFS SD+EQ TIS +TS++Q NPS
Sbjct: 1 MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITISLNTTSHIQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KV+QILESLR+EPN AFSFF KLEERGF+HNISTY ALIRILC WG+ERKLDSLFL+LIG
Sbjct: 61 KVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
S+K EFDV DLLESLNQG+V+DGSFIRAYD+LIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL+EHGK N+ALTVY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAIDIF+
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVVPNAFA +AYIEGLCTH CS +GYQLLQ WR + APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
+++ AE VF M KY VVP+AQTYGVLINGYCK L LQKALSLHS+MLSKGIKTNCVIVS
Sbjct: 301 EVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQMYSEVVNQFK FQ +GVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKI+EA MFE LKKNGIEPDTITYNVLAAGLSRNGLVSEV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
+DLL YM EHGLREDP++ NLIIENLC+GGKVKEAT IFN+LEVKT DNYSAMINGYCAA
Sbjct: 481 KDLLDYMDEHGLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDNYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
N KDAYELFV+LSKKG +K SL RLVSSLCMED+NDRAIKVIKRLS +N+EANEIVY
Sbjct: 541 NRTKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMEDSNDRAIKVIKRLSIINVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
NKVIASLCR GNMKMAQ LFDCL+C GLTPDL TYTMMINGYCKI+F REAY LLCDMK+
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTMMINGYCKINFLREAYELLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDI IYTVLLDGQFKT LRGLCS++D RG KQE AF S IF EM+DMKIT DVI
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLRGAKQETAFTSRIFDEMEDMKITPDVICC 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDA++L E+MVDQGI PDTVTYT+L+SG ++GDV+KA +LFDDMLS
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLS 780
Query: 781 KGILPDAHF 789
KG+LPDA F
Sbjct: 781 KGVLPDAFF 789
BLAST of MS002377 vs. ExPASy Swiss-Prot
Match:
O81028 (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g26790 PE=3 SV=1)
HSP 1 Score: 537.0 bits (1382), Expect = 3.8e-151
Identity = 310/770 (40.26%), Postives = 456/770 (59.22%), Query Frame = 0
Query: 40 SDNEQSTISYPSTSNVQCNPSKVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALI 99
SD+EQ +++ + S + + ++L S R +PN+A SF +L+E G N++ Y L+
Sbjct: 39 SDSEQQQVNHLNLSKL--TQHGLQRLLNSTRDDPNLALSFLRQLKEHGVSPNVNAYATLV 98
Query: 100 RILCLWGMERKLDSLFLDLIGSKKMEFDVSDLLESL-NQGHVVDGSF--IRAYDALIKAY 159
RIL WG++ KLDS+ ++LI +++ F V DL+E + Q SF IR AL+KAY
Sbjct: 99 RILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAY 158
Query: 160 VSVGLFDSAVDLLFRPKRKGFVPHIFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPND 219
VS+G+FD A D+LF+ KR V I CNFL+NR+ E GK + +T+++ LK+ G N+
Sbjct: 159 VSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANE 218
Query: 220 YTYAIVIKALCKMGNMKEAIDIFQEMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQK 279
YTYAIV+KALC+ GN++EA + E + F Y +I GLC ++ L+ +
Sbjct: 219 YTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKAVALILE 278
Query: 280 W--RESGAPIDVYAYT-VVIRGFCEEMKIDDAEKVFFYMVKYVVP-DAQTYGVLINGYCK 339
R+ A D+ A +V+RGFC EMK+ AE V M + D +I+ YCK
Sbjct: 279 LIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCK 338
Query: 340 KLMLQKALSLHSYMLSKGIKTNCVIVSSILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVA 399
+ L +AL ML KG+K NCVIVS ILQC +M M E + +FK F+ +F D+V
Sbjct: 339 NMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVC 398
Query: 400 YNIVVDALCEQGRLGEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLK 459
YN+ DAL + GR+ EA ELL++M R I DV++YTT+I G+ +QGK+ +A ++ +++
Sbjct: 399 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 458
Query: 460 KNGIEPDTITYNVLAAGLSRNGLVSEVQDLLHYMKEHGLREDPRMRNLIIENLCMGGKVK 519
NG+ PD ITYNVL +GL+RNG EV ++ MK G + + ++IIE LC KVK
Sbjct: 459 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 518
Query: 520 EATAIFNNLEVKTPDNYSAMINGYCAANHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLC 579
EA F++LE K P+N ++ + GYC A K AY+ FV L ++ I+L SLC
Sbjct: 519 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYP---LRKSVYIKLFFSLC 578
Query: 580 MEDANDRAIKVIKRLSTMNLEANEIVYNKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLI 639
+E ++A V+K++S +E + K+I + C++ N++ AQ LFD +V GL PDL
Sbjct: 579 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 638
Query: 640 TYTMMINGYCKIDFWREAYRLLCDMKDRGRKPDIVIYTVLLDGQFK--TTLRGLCSSMDS 699
TYT+MI+ YC+++ ++A L DMK RG KPD+V YTVLLD K CS
Sbjct: 639 TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGE 698
Query: 700 RGLKQEIAFNSTIFYEMKDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQGIEPD 759
G ++ S + E I LDV+ YTVLID CKMNNL A LF+ M+D G+EPD
Sbjct: 699 VGKRKA----SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 758
Query: 760 TVTYTSLISGCYKNGDVKKAASLFDDMLSKGILPDAHF-SLLQSDILQTK 800
V YT+LIS ++ G + A +L ++ K +P F + ++S L+ K
Sbjct: 759 MVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAK 793
BLAST of MS002377 vs. ExPASy Swiss-Prot
Match:
Q9LMH5 (Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis thaliana OX=3702 GN=At1g13800 PE=3 SV=1)
HSP 1 Score: 455.3 bits (1170), Expect = 1.4e-126
Identity = 266/809 (32.88%), Postives = 444/809 (54.88%), Query Frame = 0
Query: 28 AIAQLSLCSFSHSDN-EQSTISYPSTSNVQCNPSKVVQILESLRKEPNIAFSFFCKLEER 87
A+A+ +L + SHS+ ++ T Y + ++ N V+++L S++ +P +A SF ++E
Sbjct: 29 ALARTNL-TISHSEQVKEGTFDYKA---LELNDIGVLRVLNSMKDDPYLALSFLKRIEGN 88
Query: 88 GFQHNISTYVALIRILCLWGMERKLDSLFLDLI--GSKKMEFDVSDLLESLNQGHVVDGS 147
++ Y +IRI+C WG+++KLD+ +L+ G + F V DLL+++ +
Sbjct: 89 VTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVL 148
Query: 148 FIRAYDALIKAYVSVGLFDSAVDLLFRPKRK-GFVPHIFTCNFLLNRLVEHGKTNVALTV 207
IR AL+KAY ++ +FD A+D+ FR G P I NFL++R++ G++++ +
Sbjct: 149 LIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGF 208
Query: 208 YELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQEMSAAGVVPNAFAYSAYIEGLCT 267
+ ++R G + +TY +V++AL + + +E + + + Y +IEGLC
Sbjct: 209 FWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCL 268
Query: 268 HHCSDWGYQLLQKWRESGAPIDV----YAYTVVIRGFCEEMKIDDAEKVFFYMVKY-VVP 327
+ +D Y LLQ R++ +D AY V+RG C EM+I+DAE V M K+ + P
Sbjct: 269 NQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDP 328
Query: 328 DAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSSILQCLSRMQMYSEVVNQF 387
D Y +I G+ K + + KA+ + + ML K + NCVIVSSILQC +M +SE + F
Sbjct: 329 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF 388
Query: 388 KAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQ 447
K F+ + D+V YN+ DAL + G++ EA+EL +MT + I DV++YTT+I G +Q
Sbjct: 389 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 448
Query: 448 GKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQDLLHYMKEHGLREDPRMR 507
GK +A ++ ++ G PD + YNVLA GL+ NGL E + L M+ G++
Sbjct: 449 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 508
Query: 508 NLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAANHKKDAYELFVDLSKKGCF 567
N++IE L G++ +A A + +LE K+ +N ++M+ G+CAA A+E F+ L
Sbjct: 509 NMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP--- 568
Query: 568 IKNGSLIRLVSSLCME-DANDRAIKVIKRLSTMNLEANEIVYNKVIASLCRVGNMKMAQR 627
+ L +SLC E D +A ++ R+ + +E + +Y K+I + CRV N++ A+
Sbjct: 569 LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE 628
Query: 628 LFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDRGRKPDIVIYTVLLDGQF 687
F+ LV + PDL TYT+MIN YC+++ ++AY L DMK R KPD+V Y+VLL+
Sbjct: 629 FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDP 688
Query: 688 KTTLR--------------------------------GLCSSMDSRGLKQEIAFNSTIF- 747
+ ++ L M R + ++ + +
Sbjct: 689 ELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 748
Query: 748 --------YEMKDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTS 786
EMK + DV +YTVLID CK+ +L +A +F++M++ G++PD YT+
Sbjct: 749 NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 808
BLAST of MS002377 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 7.1e-73
Identity = 162/616 (26.30%), Postives = 300/616 (48.70%), Query Frame = 0
Query: 179 PHIFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDI 238
P + T L+ G+ ++ + + GF + + ++K LC +A+DI
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 239 -FQEMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKW---RESGAPIDVYAYTVVIR 298
+ M+ G +PN F+Y+ ++GLC + S +LL R G+P DV +YT VI
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 299 GFCEEMKIDDAEKVFFYMV-KYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKT 358
GF +E D A + M+ + ++PD TY +I CK + KA+ + + M+ G+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 359 NCVIVSSILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELL 418
+C+ +SIL E + K + GV D V Y++++D LC+ GR EA ++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 419 EDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRN 478
+ MT R ++ ++ Y T+++G+ +G + E + + + +NGI PD +++L ++
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 479 GLVSEVQDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNL--EVKTPDN--Y 538
G V + + M++ GL + +I LC G+V++A F + E +P N Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 539 SAMINGYCAANHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLST 598
+++I+G C N + A EL +++ +G + ++ S C E + K+ + +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 599 MNLEANEIVYNKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWRE 658
+ ++ N I YN +I C G M A +L +V GL P+ +TY+ +INGYCKI +
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 659 AYRLLCDMKDRGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKD 718
A L +M+ G PDI+ Y ++L G F+T + A ++ + +
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQT---------------RRTAAAKELYVRITE 624
Query: 719 MKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKK 778
+++ Y +++ CK +DA+ +F+ + ++ + T+ +I K G +
Sbjct: 625 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 684
Query: 779 AASLFDDMLSKGILPD 786
A LF S G++P+
Sbjct: 685 AKDLFVAFSSNGLVPN 685
BLAST of MS002377 vs. ExPASy Swiss-Prot
Match:
Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 9.9e-67
Identity = 161/645 (24.96%), Postives = 298/645 (46.20%), Query Frame = 0
Query: 146 IRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPHIFTCNFLLNRLVEHGKTNVALTVYE 205
+ + LI+ + G DSA+ LL K I N ++ + GK ++A +
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 206 LLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQEMSAAGVVPNAFAYSAYIEGLCTHH 265
++ G P++ TY +I LCK + EA+++F+ + VP +AY+ I G +
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 266 CSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEMKIDDAEKVFFYMVKYVVPDAQTYGV 325
D Y LL++ R G+ V AY ++ + K+D+A KVF M K P+ TY +
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI 382
Query: 326 LINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSSILQCLSRMQMYSEVVNQFKAFQGKG 385
LI+ C+ L A L M Q G
Sbjct: 383 LIDMLCRAGKLDTAFELRDSM-----------------------------------QKAG 442
Query: 386 VFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAR 445
+F + NI+VD LC+ +L EA + E+M + D + + ++I G G++ +A
Sbjct: 443 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 502
Query: 446 EMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQDLLHYMKEHGLREDPRMRNLIIENL 505
+++EK+ + ++I Y L +G + + M D ++ N ++ +
Sbjct: 503 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 562
Query: 506 CMGGKVKEATAIFNNLEVK--TPD--NYSAMINGYCAANHKKDAYELFVDLSKKGCFIKN 565
G+ ++ A+F ++ + PD +YS +I+G A + YELF + ++GC +
Sbjct: 563 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 622
Query: 566 GSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYNKVIASLCRVGNMKMAQRLFDC 625
+ ++ C ++A ++++ + T E + Y VI L ++ + A LF+
Sbjct: 623 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 682
Query: 626 LVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDRGRKPDIVIYTVLLDGQFKTTL 685
+ +++ Y+ +I+G+ K+ EAY +L ++ +G P++ + LLD K
Sbjct: 683 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA-- 742
Query: 686 RGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEE 745
+EI F MK++K T + + Y +LI+ CK+ N A + ++E
Sbjct: 743 -------------EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 797
Query: 746 MVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSKGILPDA 787
M QG++P T++YT++ISG K G++ +A +LFD + G +PD+
Sbjct: 803 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
BLAST of MS002377 vs. ExPASy Swiss-Prot
Match:
Q9LN69 (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)
HSP 1 Score: 253.4 bits (646), Expect = 8.4e-66
Identity = 191/739 (25.85%), Postives = 332/739 (44.93%), Query Frame = 0
Query: 65 ILESLRKEPNIAFSFF-CKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIGSKK 124
IL LR P F +++ F+ + Y ++ IL ++ S +L+
Sbjct: 76 ILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALN- 135
Query: 125 MEFDVSDLLESLNQGHVVDGSFIR----------AYDALIKAYVSVGLFDSAVDLLFRPK 184
+ G VV G +R +D ++K Y GL +A+ +
Sbjct: 136 ------------HSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMG 195
Query: 185 RKGFVPHIFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMK 244
G +P + +CN LL+ LV G+ VAL VY+ + P+ +T +IV+ A C+ GN+
Sbjct: 196 NYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVD 255
Query: 245 EAIDIFQEM-SAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVV 304
+A+ +E S+ G+ N Y++ I G + ++L+ E G +V YT +
Sbjct: 256 KAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSL 315
Query: 305 IRGFCEEMKIDDAEKVF-FYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGI 364
I+G+C++ +++AE VF K +V D YGVL++GYC+ ++ A+ +H M+ G+
Sbjct: 316 IKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGV 375
Query: 365 KTNCVIVSSILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAME 424
+TN I +S++ + E F + D YN +VD C G + EA++
Sbjct: 376 RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 435
Query: 425 LLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLS 484
L + M +++ V+ Y ++KG+ G H+ +++ + K G+ D I+ + L L
Sbjct: 436 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 495
Query: 485 RNGLVSEVQDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEV----KTPD 544
+ G +E L + GL D N++I LC KV EA I +N+ +
Sbjct: 496 KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 555
Query: 545 NYSAMINGYCAANHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRL 604
Y A+ +GY + K+A+ + + +KG F L+S ++ ++ L
Sbjct: 556 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 615
Query: 605 STMNLEANEIVYNKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFW 664
L Y +I C +G + A ++ G+T ++ + + N ++D
Sbjct: 616 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKI 675
Query: 665 REAYRLLCDMKDRGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEM 724
EA LL IV + +LL G +L+ + + LK + S
Sbjct: 676 DEACLLL---------QKIVDFDLLLPGY--QSLKEFLEASATTCLKTQKIAESVENSTP 735
Query: 725 KDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQG-IEPDTVTYTSLISGCYKNGD 784
K + + +++ Y V I CK L DA LF +++ PD TYT LI GC GD
Sbjct: 736 KKLLVPNNIV-YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 789
Query: 785 VKKAASLFDDMLSKGILPD 786
+ KA +L D+M KGI+P+
Sbjct: 796 INKAFTLRDEMALKGIIPN 789
BLAST of MS002377 vs. ExPASy TrEMBL
Match:
A0A6J1C1U9 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007189 PE=4 SV=1)
HSP 1 Score: 1584.7 bits (4102), Expect = 0.0e+00
Identity = 787/789 (99.75%), Postives = 788/789 (99.87%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS
Sbjct: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KVVQILESLRKEP+IAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG
Sbjct: 61 KVVQILESLRKEPSIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH
Sbjct: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ
Sbjct: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM
Sbjct: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSS 360
KIDDAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSS
Sbjct: 301 KIDDAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSS 360
Query: 361 ILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQ 420
ILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQ
Sbjct: 361 ILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQ 420
Query: 421 IQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQ 480
IQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQ
Sbjct: 421 IQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQ 480
Query: 481 DLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAAN 540
DLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAAN
Sbjct: 481 DLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAAN 540
Query: 541 HKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYN 600
HKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYN
Sbjct: 541 HKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYN 600
Query: 601 KVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDR 660
KVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDR
Sbjct: 601 KVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDR 660
Query: 661 GRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYT 720
GRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYT
Sbjct: 661 GRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYT 720
Query: 721 VLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSK 780
VLIDAYCKMN LNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSK
Sbjct: 721 VLIDAYCKMNKLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSK 780
Query: 781 GILPDAHFS 790
GILPDAHFS
Sbjct: 781 GILPDAHFS 789
BLAST of MS002377 vs. ExPASy TrEMBL
Match:
A0A6J1EVM2 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438390 PE=4 SV=1)
HSP 1 Score: 1285.0 bits (3324), Expect = 0.0e+00
Identity = 650/803 (80.95%), Postives = 713/803 (88.79%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KLNK+ L+LVKFASTAIA+L+ CSFS SD+EQ TIS +TS++Q NPS
Sbjct: 1 MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITISLNTTSHIQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KV+QILESLR+EPN AFSFF KLEERGF HNISTY ALIRILC WG+ERKLDSLFL+LIG
Sbjct: 61 KVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALIRILCSWGLERKLDSLFLNLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
S+K EFDV DLLESLNQG+V+DGSFIRAYD+LIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL+EHGK N+ALTVY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAIDIF+
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVVPNAFA +AYIEGLCTH CS +GYQLLQ WR + APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
+++ AE VF M KY VVP+AQTYGVLINGYCK L LQKALSLHS+MLSKGIKTNCVIVS
Sbjct: 301 EVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQMYSEVVNQFK FQ +GVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKI+EA MFE LKKNGIEPDTITYNVLAAGLSRNGLVSEV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
++LL YM EHGLREDP++ NLIIENLC+GGKVKEAT IFN+LEVKT DNYSAMINGYCAA
Sbjct: 481 KNLLDYMDEHGLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDNYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
N KDAYELFV+LSKKG +K SL RLVSSLCMED+NDRAIKVIKRLS +N+EANEIVY
Sbjct: 541 NRTKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMEDSNDRAIKVIKRLSIINVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
NKVIASLCR GNMKMAQ LFDCL+C GLTPDL TYTMMINGYCKI+F REAY LLCDMK+
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTMMINGYCKINFLREAYELLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDI IYTVLLDGQFKT LRGLCS++D RG KQE AF S IF EM+DMKIT DVI Y
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLRGAKQETAFTSRIFDEMEDMKITPDVICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDA++L E+MVDQGI PDTVTYT+L+SG ++GDV+KA +LFDDMLS
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVALFDDMLS 780
Query: 781 KGILPDAHFSLLQSDILQTKENA 803
KG+LPDA F + S + +ENA
Sbjct: 781 KGVLPDAFFISVVSRYSKIQENA 803
BLAST of MS002377 vs. ExPASy TrEMBL
Match:
A0A6J1F161 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438390 PE=4 SV=1)
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 646/789 (81.88%), Postives = 706/789 (89.48%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KLNK+ L+LVKFASTAIA+L+ CSFS SD+EQ TIS +TS++Q NPS
Sbjct: 1 MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITISLNTTSHIQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KV+QILESLR+EPN AFSFF KLEERGF HNISTY ALIRILC WG+ERKLDSLFL+LIG
Sbjct: 61 KVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALIRILCSWGLERKLDSLFLNLIG 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
S+K EFDV DLLESLNQG+V+DGSFIRAYD+LIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL+EHGK N+ALTVY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAIDIF+
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVVPNAFA +AYIEGLCTH CS +GYQLLQ WR + APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
+++ AE VF M KY VVP+AQTYGVLINGYCK L LQKALSLHS+MLSKGIKTNCVIVS
Sbjct: 301 EVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQMYSEVVNQFK FQ +GVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKI+EA MFE LKKNGIEPDTITYNVLAAGLSRNGLVSEV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
++LL YM EHGLREDP++ NLIIENLC+GGKVKEAT IFN+LEVKT DNYSAMINGYCAA
Sbjct: 481 KNLLDYMDEHGLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDNYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
N KDAYELFV+LSKKG +K SL RLVSSLCMED+NDRAIKVIKRLS +N+EANEIVY
Sbjct: 541 NRTKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMEDSNDRAIKVIKRLSIINVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
NKVIASLCR GNMKMAQ LFDCL+C GLTPDL TYTMMINGYCKI+F REAY LLCDMK+
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTMMINGYCKINFLREAYELLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDI IYTVLLDGQFKT LRGLCS++D RG KQE AF S IF EM+DMKIT DVI Y
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLRGAKQETAFTSRIFDEMEDMKITPDVICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDA++L E+MVDQGI PDTVTYT+L+SG ++GDV+KA +LFDDMLS
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVALFDDMLS 780
Query: 781 KGILPDAHF 789
KG+LPDA F
Sbjct: 781 KGVLPDAFF 789
BLAST of MS002377 vs. ExPASy TrEMBL
Match:
A0A6J1JGR8 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484960 PE=4 SV=1)
HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 643/802 (80.17%), Postives = 703/802 (87.66%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P KL++L L+LVKFASTAIAQL+ CSFSHSD+EQST + +T VQ NPS
Sbjct: 1 MNCLLLAVNNPIKLSRLKLKLVKFASTAIAQLNPCSFSHSDDEQSTTFFHTTLPVQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KVVQIL SLR+EP IAFSFF +LEERGFQHNISTY ALIRILC WG+ERKL+SLFL+LI
Sbjct: 61 KVVQILGSLRREPKIAFSFFRELEERGFQHNISTYAALIRILCSWGLERKLESLFLNLIE 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
SKKMEFDV DLLESLNQG+ V GSF RAYDALIKAYVSV LFDSAVDLLFR +RKGFVPH
Sbjct: 121 SKKMEFDVLDLLESLNQGYAVGGSFTRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCNFLLNRL EHGK N+AL VY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAI IF+
Sbjct: 181 IFTCNFLLNRLTEHGKMNMALVVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIYIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVV +AFAY+AYIEGLCTHHCS YQLLQ WRE+ APIDVYAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWREAQAPIDVYAYFVVIRGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
KID+AE VF M +Y VVPDAQTYGVLINGYCKKL LQKALSLHS MLSKGIKTNCVIVS
Sbjct: 301 KIDEAENVFLEMEQYGVVPDAQTYGVLINGYCKKLKLQKALSLHSLMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQM SEVVNQFK FQGKGVFFDKVAYNIVV ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLLRMQMCSEVVNQFKVFQGKGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGFFVQGKIHEA MFE LKKNGIEPDTITYNVLAAGLSRNGLVS+V
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMVMFENLKKNGIEPDTITYNVLAAGLSRNGLVSKV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
Q LL YM+EHGLREDP++ +L+IENLC+GGKVKEAT FN+LEVKT +NYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHGLREDPKILDLVIENLCVGGKVKEATEFFNSLEVKTVENYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
NH DAY+LFV+LSKKG IK +L RLVSSLCMED++DRAIKVIK+L M+++AN+IVY
Sbjct: 541 NHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSLCMEDSSDRAIKVIKKLPIMDVKANKIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
N VI+SLCRVGNMK AQ LFDCLVC GLTPDLITYTMMINGYCKI+F REAY LLCDMK+
Sbjct: 601 NNVISSLCRVGNMKRAQSLFDCLVCAGLTPDLITYTMMINGYCKINFLREAYELLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDIVIYTVLLDG FKT L+ LCSS+ RG KQEIA STIF EMKDMKIT D+I Y
Sbjct: 661 RGRKPDIVIYTVLLDGLFKTRLQELCSSVHLRGEKQEIALASTIFDEMKDMKITPDIICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNL+DAV+LFEEMVDQGIEPDTVTYT+L+SGC ++GD +KA +L DMLS
Sbjct: 721 TVLIDGYCKMNNLSDAVVLFEEMVDQGIEPDTVTYTALLSGCCRSGDTEKAVTLMSDMLS 780
Query: 781 KGILPDAHFS-LLQSDILQTKE 801
KGILP FS LL + +TK+
Sbjct: 781 KGILPSEQFSTLLHHNTPKTKK 802
BLAST of MS002377 vs. ExPASy TrEMBL
Match:
A0A6J1E1Q9 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430036 PE=4 SV=1)
HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 639/802 (79.68%), Postives = 698/802 (87.03%), Query Frame = 0
Query: 1 MNCLLHVVNCPTKLNKLNLRLVKFASTAIAQLSLCSFSHSDNEQSTISYPSTSNVQCNPS 60
MNCLL VN P K L+LVKFASTAIAQL+ CSFSHSD EQST + +T VQ NPS
Sbjct: 1 MNCLLLAVNNPIK-----LKLVKFASTAIAQLNPCSFSHSDGEQSTTFFHTTLPVQFNPS 60
Query: 61 KVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 120
KVVQIL SLR+EPNIAFSFF +LE+RGFQHNISTY ALIRILC WG+ERKL+SLFL+LI
Sbjct: 61 KVVQILGSLRREPNIAFSFFRELEDRGFQHNISTYAALIRILCSWGLERKLESLFLNLID 120
Query: 121 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPH 180
SKKMEFDV DLLESLNQG+ V+GSF RAYDALIKAYVSV LFDSAVDLLFR RKGFVPH
Sbjct: 121 SKKMEFDVLDLLESLNQGYAVNGSFTRAYDALIKAYVSVSLFDSAVDLLFRSGRKGFVPH 180
Query: 181 IFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQ 240
IFTCN+LLNRL++HGK N+AL VY+ LKR GFHPNDYTYAIVIKALCKMGNM+EAI IF+
Sbjct: 181 IFTCNYLLNRLIKHGKMNIALVVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIYIFE 240
Query: 241 EMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEM 300
EMS AGVV +AFAY+AYIEGLCTHHCS YQLLQ WR + APIDVYAY+VVI GFCEEM
Sbjct: 241 EMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWRAAQAPIDVYAYSVVIHGFCEEM 300
Query: 301 KIDDAEKVFFYMVKY-VVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVS 360
KID+AE VF M KY VVP+AQTYGVLINGYCKKL LQKALSLHS MLSKGIKTNCVIVS
Sbjct: 301 KIDEAENVFLEMEKYGVVPNAQTYGVLINGYCKKLKLQKALSLHSLMLSKGIKTNCVIVS 360
Query: 361 SILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSR 420
SILQCL RMQM SEVVNQFK FQGKGV+FDKVAYNIV+ ALCEQG+L EAMELLEDMTSR
Sbjct: 361 SILQCLLRMQMCSEVVNQFKVFQGKGVYFDKVAYNIVLHALCEQGKLEEAMELLEDMTSR 420
Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480
QIQMDVVHYTTMIKGF VQGKIHEA MFE LKKNGIEPDTITY+VLAAGLSRNGLVS+V
Sbjct: 421 QIQMDVVHYTTMIKGFLVQGKIHEAMVMFENLKKNGIEPDTITYDVLAAGLSRNGLVSKV 480
Query: 481 QDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAA 540
Q LL YM+EHGLREDP++ NL+IENLC+GGKVKEAT FN+LEVKT DNYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHGLREDPKILNLVIENLCVGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
Query: 541 NHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVY 600
NH DAY+LFV+LSKKG IK +L RLVSSLCMED++ RAIKVIK+L M++EANEIVY
Sbjct: 541 NHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSLCMEDSSGRAIKVIKKLPIMDVEANEIVY 600
Query: 601 NKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKD 660
N VI+SLCRVGNMK AQ LFDCLVC GLTPDLITYTMMI GYCKI+F REAY LLCDMK+
Sbjct: 601 NNVISSLCRVGNMKRAQSLFDCLVCAGLTPDLITYTMMIKGYCKINFLREAYLLLCDMKN 660
Query: 661 RGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWY 720
RGRKPDIVIYTVLLDG FKT L+ CSS+D RG KQEIAF STIF EMKDMKIT D+I Y
Sbjct: 661 RGRKPDIVIYTVLLDGLFKTRLQEFCSSVDLRGEKQEIAFASTIFDEMKDMKITPDIICY 720
Query: 721 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 780
TVLID YCKMNNLNDAV+LFEEMVDQGIEPD VTYT+L+SGC ++GD KKAA+L DMLS
Sbjct: 721 TVLIDGYCKMNNLNDAVVLFEEMVDQGIEPDIVTYTALLSGCCRSGDTKKAATLMSDMLS 780
Query: 781 KGILPDAHF-SLLQSDILQTKE 801
KGILP F SLL + L+TK+
Sbjct: 781 KGILPSEQFSSLLHHNSLKTKK 797
BLAST of MS002377 vs. TAIR 10
Match:
AT2G26790.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 537.0 bits (1382), Expect = 2.7e-152
Identity = 310/770 (40.26%), Postives = 456/770 (59.22%), Query Frame = 0
Query: 40 SDNEQSTISYPSTSNVQCNPSKVVQILESLRKEPNIAFSFFCKLEERGFQHNISTYVALI 99
SD+EQ +++ + S + + ++L S R +PN+A SF +L+E G N++ Y L+
Sbjct: 39 SDSEQQQVNHLNLSKL--TQHGLQRLLNSTRDDPNLALSFLRQLKEHGVSPNVNAYATLV 98
Query: 100 RILCLWGMERKLDSLFLDLIGSKKMEFDVSDLLESL-NQGHVVDGSF--IRAYDALIKAY 159
RIL WG++ KLDS+ ++LI +++ F V DL+E + Q SF IR AL+KAY
Sbjct: 99 RILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAY 158
Query: 160 VSVGLFDSAVDLLFRPKRKGFVPHIFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPND 219
VS+G+FD A D+LF+ KR V I CNFL+NR+ E GK + +T+++ LK+ G N+
Sbjct: 159 VSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANE 218
Query: 220 YTYAIVIKALCKMGNMKEAIDIFQEMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQK 279
YTYAIV+KALC+ GN++EA + E + F Y +I GLC ++ L+ +
Sbjct: 219 YTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKAVALILE 278
Query: 280 W--RESGAPIDVYAYT-VVIRGFCEEMKIDDAEKVFFYMVKYVVP-DAQTYGVLINGYCK 339
R+ A D+ A +V+RGFC EMK+ AE V M + D +I+ YCK
Sbjct: 279 LIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCK 338
Query: 340 KLMLQKALSLHSYMLSKGIKTNCVIVSSILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVA 399
+ L +AL ML KG+K NCVIVS ILQC +M M E + +FK F+ +F D+V
Sbjct: 339 NMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVC 398
Query: 400 YNIVVDALCEQGRLGEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLK 459
YN+ DAL + GR+ EA ELL++M R I DV++YTT+I G+ +QGK+ +A ++ +++
Sbjct: 399 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 458
Query: 460 KNGIEPDTITYNVLAAGLSRNGLVSEVQDLLHYMKEHGLREDPRMRNLIIENLCMGGKVK 519
NG+ PD ITYNVL +GL+RNG EV ++ MK G + + ++IIE LC KVK
Sbjct: 459 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 518
Query: 520 EATAIFNNLEVKTPDNYSAMINGYCAANHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLC 579
EA F++LE K P+N ++ + GYC A K AY+ FV L ++ I+L SLC
Sbjct: 519 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYP---LRKSVYIKLFFSLC 578
Query: 580 MEDANDRAIKVIKRLSTMNLEANEIVYNKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLI 639
+E ++A V+K++S +E + K+I + C++ N++ AQ LFD +V GL PDL
Sbjct: 579 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 638
Query: 640 TYTMMINGYCKIDFWREAYRLLCDMKDRGRKPDIVIYTVLLDGQFK--TTLRGLCSSMDS 699
TYT+MI+ YC+++ ++A L DMK RG KPD+V YTVLLD K CS
Sbjct: 639 TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGE 698
Query: 700 RGLKQEIAFNSTIFYEMKDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQGIEPD 759
G ++ S + E I LDV+ YTVLID CKMNNL A LF+ M+D G+EPD
Sbjct: 699 VGKRKA----SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 758
Query: 760 TVTYTSLISGCYKNGDVKKAASLFDDMLSKGILPDAHF-SLLQSDILQTK 800
V YT+LIS ++ G + A +L ++ K +P F + ++S L+ K
Sbjct: 759 MVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAK 793
BLAST of MS002377 vs. TAIR 10
Match:
AT1G13800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 455.3 bits (1170), Expect = 1.0e-127
Identity = 266/809 (32.88%), Postives = 444/809 (54.88%), Query Frame = 0
Query: 28 AIAQLSLCSFSHSDN-EQSTISYPSTSNVQCNPSKVVQILESLRKEPNIAFSFFCKLEER 87
A+A+ +L + SHS+ ++ T Y + ++ N V+++L S++ +P +A SF ++E
Sbjct: 29 ALARTNL-TISHSEQVKEGTFDYKA---LELNDIGVLRVLNSMKDDPYLALSFLKRIEGN 88
Query: 88 GFQHNISTYVALIRILCLWGMERKLDSLFLDLI--GSKKMEFDVSDLLESLNQGHVVDGS 147
++ Y +IRI+C WG+++KLD+ +L+ G + F V DLL+++ +
Sbjct: 89 VTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVL 148
Query: 148 FIRAYDALIKAYVSVGLFDSAVDLLFRPKRK-GFVPHIFTCNFLLNRLVEHGKTNVALTV 207
IR AL+KAY ++ +FD A+D+ FR G P I NFL++R++ G++++ +
Sbjct: 149 LIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGF 208
Query: 208 YELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQEMSAAGVVPNAFAYSAYIEGLCT 267
+ ++R G + +TY +V++AL + + +E + + + Y +IEGLC
Sbjct: 209 FWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCL 268
Query: 268 HHCSDWGYQLLQKWRESGAPIDV----YAYTVVIRGFCEEMKIDDAEKVFFYMVKY-VVP 327
+ +D Y LLQ R++ +D AY V+RG C EM+I+DAE V M K+ + P
Sbjct: 269 NQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDP 328
Query: 328 DAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSSILQCLSRMQMYSEVVNQF 387
D Y +I G+ K + + KA+ + + ML K + NCVIVSSILQC +M +SE + F
Sbjct: 329 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF 388
Query: 388 KAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQ 447
K F+ + D+V YN+ DAL + G++ EA+EL +MT + I DV++YTT+I G +Q
Sbjct: 389 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 448
Query: 448 GKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQDLLHYMKEHGLREDPRMR 507
GK +A ++ ++ G PD + YNVLA GL+ NGL E + L M+ G++
Sbjct: 449 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 508
Query: 508 NLIIENLCMGGKVKEATAIFNNLEVKTPDNYSAMINGYCAANHKKDAYELFVDLSKKGCF 567
N++IE L G++ +A A + +LE K+ +N ++M+ G+CAA A+E F+ L
Sbjct: 509 NMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP--- 568
Query: 568 IKNGSLIRLVSSLCME-DANDRAIKVIKRLSTMNLEANEIVYNKVIASLCRVGNMKMAQR 627
+ L +SLC E D +A ++ R+ + +E + +Y K+I + CRV N++ A+
Sbjct: 569 LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE 628
Query: 628 LFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDRGRKPDIVIYTVLLDGQF 687
F+ LV + PDL TYT+MIN YC+++ ++AY L DMK R KPD+V Y+VLL+
Sbjct: 629 FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDP 688
Query: 688 KTTLR--------------------------------GLCSSMDSRGLKQEIAFNSTIF- 747
+ ++ L M R + ++ + +
Sbjct: 689 ELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 748
Query: 748 --------YEMKDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTS 786
EMK + DV +YTVLID CK+ +L +A +F++M++ G++PD YT+
Sbjct: 749 NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 808
BLAST of MS002377 vs. TAIR 10
Match:
AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 256.5 bits (654), Expect = 7.0e-68
Identity = 161/645 (24.96%), Postives = 298/645 (46.20%), Query Frame = 0
Query: 146 IRAYDALIKAYVSVGLFDSAVDLLFRPKRKGFVPHIFTCNFLLNRLVEHGKTNVALTVYE 205
+ + LI+ + G DSA+ LL K I N ++ + GK ++A +
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 206 LLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIFQEMSAAGVVPNAFAYSAYIEGLCTHH 265
++ G P++ TY +I LCK + EA+++F+ + VP +AY+ I G +
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 266 CSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEEMKIDDAEKVFFYMVKYVVPDAQTYGV 325
D Y LL++ R G+ V AY ++ + K+D+A KVF M K P+ TY +
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI 382
Query: 326 LINGYCKKLMLQKALSLHSYMLSKGIKTNCVIVSSILQCLSRMQMYSEVVNQFKAFQGKG 385
LI+ C+ L A L M Q G
Sbjct: 383 LIDMLCRAGKLDTAFELRDSM-----------------------------------QKAG 442
Query: 386 VFFDKVAYNIVVDALCEQGRLGEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAR 445
+F + NI+VD LC+ +L EA + E+M + D + + ++I G G++ +A
Sbjct: 443 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 502
Query: 446 EMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSEVQDLLHYMKEHGLREDPRMRNLIIENL 505
+++EK+ + ++I Y L +G + + M D ++ N ++ +
Sbjct: 503 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 562
Query: 506 CMGGKVKEATAIFNNLEVK--TPD--NYSAMINGYCAANHKKDAYELFVDLSKKGCFIKN 565
G+ ++ A+F ++ + PD +YS +I+G A + YELF + ++GC +
Sbjct: 563 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 622
Query: 566 GSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEANEIVYNKVIASLCRVGNMKMAQRLFDC 625
+ ++ C ++A ++++ + T E + Y VI L ++ + A LF+
Sbjct: 623 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 682
Query: 626 LVCTGLTPDLITYTMMINGYCKIDFWREAYRLLCDMKDRGRKPDIVIYTVLLDGQFKTTL 685
+ +++ Y+ +I+G+ K+ EAY +L ++ +G P++ + LLD K
Sbjct: 683 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA-- 742
Query: 686 RGLCSSMDSRGLKQEIAFNSTIFYEMKDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEE 745
+EI F MK++K T + + Y +LI+ CK+ N A + ++E
Sbjct: 743 -------------EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 797
Query: 746 MVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLSKGILPDA 787
M QG++P T++YT++ISG K G++ +A +LFD + G +PD+
Sbjct: 803 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
BLAST of MS002377 vs. TAIR 10
Match:
AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 253.4 bits (646), Expect = 5.9e-67
Identity = 191/739 (25.85%), Postives = 332/739 (44.93%), Query Frame = 0
Query: 65 ILESLRKEPNIAFSFF-CKLEERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIGSKK 124
IL LR P F +++ F+ + Y ++ IL ++ S +L+
Sbjct: 76 ILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALN- 135
Query: 125 MEFDVSDLLESLNQGHVVDGSFIR----------AYDALIKAYVSVGLFDSAVDLLFRPK 184
+ G VV G +R +D ++K Y GL +A+ +
Sbjct: 136 ------------HSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMG 195
Query: 185 RKGFVPHIFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMK 244
G +P + +CN LL+ LV G+ VAL VY+ + P+ +T +IV+ A C+ GN+
Sbjct: 196 NYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVD 255
Query: 245 EAIDIFQEM-SAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVV 304
+A+ +E S+ G+ N Y++ I G + ++L+ E G +V YT +
Sbjct: 256 KAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSL 315
Query: 305 IRGFCEEMKIDDAEKVF-FYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGI 364
I+G+C++ +++AE VF K +V D YGVL++GYC+ ++ A+ +H M+ G+
Sbjct: 316 IKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGV 375
Query: 365 KTNCVIVSSILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAME 424
+TN I +S++ + E F + D YN +VD C G + EA++
Sbjct: 376 RTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALK 435
Query: 425 LLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLS 484
L + M +++ V+ Y ++KG+ G H+ +++ + K G+ D I+ + L L
Sbjct: 436 LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 495
Query: 485 RNGLVSEVQDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNLEV----KTPD 544
+ G +E L + GL D N++I LC KV EA I +N+ +
Sbjct: 496 KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 555
Query: 545 NYSAMINGYCAANHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRL 604
Y A+ +GY + K+A+ + + +KG F L+S ++ ++ L
Sbjct: 556 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 615
Query: 605 STMNLEANEIVYNKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFW 664
L Y +I C +G + A ++ G+T ++ + + N ++D
Sbjct: 616 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKI 675
Query: 665 REAYRLLCDMKDRGRKPDIVIYTVLLDGQFKTTLRGLCSSMDSRGLKQEIAFNSTIFYEM 724
EA LL IV + +LL G +L+ + + LK + S
Sbjct: 676 DEACLLL---------QKIVDFDLLLPGY--QSLKEFLEASATTCLKTQKIAESVENSTP 735
Query: 725 KDMKITLDVIWYTVLIDAYCKMNNLNDAVILFEEMVDQG-IEPDTVTYTSLISGCYKNGD 784
K + + +++ Y V I CK L DA LF +++ PD TYT LI GC GD
Sbjct: 736 KKLLVPNNIV-YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 789
Query: 785 VKKAASLFDDMLSKGILPD 786
+ KA +L D+M KGI+P+
Sbjct: 796 INKAFTLRDEMALKGIIPN 789
BLAST of MS002377 vs. TAIR 10
Match:
AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 249.6 bits (636), Expect = 8.6e-66
Identity = 192/786 (24.43%), Postives = 336/786 (42.75%), Query Frame = 0
Query: 62 VVQILESLRKEPNIAFSFFCKLE-ERGFQHNISTYVALIRILCLWGMERKLDSLFLDLIG 121
V +IL +P + FF L RGF H+ +++ LI L + SL L+
Sbjct: 73 VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132
Query: 122 SKKMEFDVSDLLESLNQGHVVDGSFIRAYDALIKAYV-SVGLFDSAVDLLFRPKRKGFVP 181
DV ++L S + + S ++D LI+ YV S + D + + +P
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSS--SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 192
Query: 182 HIFTCNFLLNRLVEHGKTNVALTVYELLKRPGFHPNDYTYAIVIKALCKMGNMKEAIDIF 241
+ T + LL+ LV+ +A+ ++ + G P+ Y Y VI++LC++ ++ A ++
Sbjct: 193 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 252
Query: 242 QEMSAAGVVPNAFAYSAYIEGLCTHHCSDWGYQLLQKWRESGAPIDVYAYTVVIRGFCEE 301
M A G N Y+ I+GLC + + DV Y ++ G C+
Sbjct: 253 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 312
Query: 302 MKID-DAEKVFFYMVKYVVPDAQTYGVLINGYCKKLMLQKALSLHSYMLSKGIKTNCVIV 361
+ + E + + P L+ G K+ +++AL+L ++ G+ N +
Sbjct: 313 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 372
Query: 362 SSILQCLSRMQMYSEVVNQFKAFQGKGVFFDKVAYNIVVDALCEQGRLGEAMELLEDMTS 421
++++ L + + + E F G+ + V Y+I++D C +G+L A+ L +M
Sbjct: 373 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 432
Query: 422 RQIQMDVVHYTTMIKGFFVQGKIHEAREMFEKLKKNGIEPDTITYNVLAAGLSRNGLVSE 481
+++ V Y ++I G G I A ++ +EP +TY L G G +++
Sbjct: 433 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 492
Query: 482 VQDLLHYMKEHGLREDPRMRNLIIENLCMGGKVKEATAIFNNL-EVKTPDN---YSAMIN 541
L H M G+ ++ L G +++A +FN + E N Y+ MI
Sbjct: 493 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 552
Query: 542 GYCAANHKKDAYELFVDLSKKGCFIKNGSLIRLVSSLCMEDANDRAIKVIKRLSTMNLEA 601
GYC A+E ++++KG S L+ LC+ A + L N E
Sbjct: 553 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 612
Query: 602 NEIVYNKVIASLCRVGNMKMAQRLFDCLVCTGLTPDLITYTMMINGYCKIDFWREAYRLL 661
NEI Y ++ CR G ++ A + +V G+ DL+ Y ++I+G K + + LL
Sbjct: 613 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 672
Query: 662 CDMKDRGRKPDIVIYTVLLDGQFKT---------------------------TLRGLC-- 721
+M DRG KPD VIYT ++D + KT + GLC
Sbjct: 673 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 732
Query: 722 ----------------SSMDSRG---------LKQEIAFNSTIFYEMKDMK-ITLDVIWY 781
SS+ ++ K E+ + +K + + Y
Sbjct: 733 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 792
Query: 782 TVLIDAYCKMNNLNDAVILFEEMVDQGIEPDTVTYTSLISGCYKNGDVKKAASLFDDMLS 786
+LI +C+ + +A L M+ G+ PD +TYT++I+ + DVKKA L++ M
Sbjct: 793 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 852
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022135146.1 | 0.0e+00 | 99.75 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Momordica ... | [more] |
| XP_023530445.1 | 0.0e+00 | 80.95 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like [Cucur... | [more] |
| XP_022932072.1 | 0.0e+00 | 80.95 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor... | [more] |
| XP_022932065.1 | 0.0e+00 | 81.88 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor... | [more] |
| KAG6587854.1 | 0.0e+00 | 81.88 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O81028 | 3.8e-151 | 40.26 | Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidop... | [more] |
| Q9LMH5 | 1.4e-126 | 32.88 | Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis th... | [more] |
| Q76C99 | 7.1e-73 | 26.30 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
| Q9M907 | 9.9e-67 | 24.96 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... | [more] |
| Q9LN69 | 8.4e-66 | 25.85 | Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C1U9 | 0.0e+00 | 99.75 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Momordic... | [more] |
| A0A6J1EVM2 | 0.0e+00 | 80.95 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor... | [more] |
| A0A6J1F161 | 0.0e+00 | 81.88 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor... | [more] |
| A0A6J1JGR8 | 0.0e+00 | 80.17 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Cucurbit... | [more] |
| A0A6J1E1Q9 | 0.0e+00 | 79.68 | pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like OS=Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G26790.1 | 2.7e-152 | 40.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G13800.1 | 1.0e-127 | 32.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G06920.1 | 7.0e-68 | 24.96 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G19290.1 | 5.9e-67 | 25.85 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G59900.1 | 8.6e-66 | 24.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
