MS002325 (gene) Bitter gourd (TR) v1

Overview


Name	MS002325
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	UPF0057 membrane protein
Location	scaffold30: 4158374 .. 4158701 (-)
RNA-Seq Expression	MS002325
Synteny	MS002325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTCGCTGCGAGATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGTACTGTAAGCTTCTGATTCTTTTCTTCTTCTTCTTCTTCTTCGCTCTTTTATTTCTGTTACTCTCATTAATTGCATAGATTCTGATTAACGATTGTTGTAATTGCAGGTTGAGTTTTGTATATGCCTTCTCTTGACGTTTCTCGGTTATATTCCTGGAATAATCTACGCCTTGTATGCCATCGTTTTCATTGATCGCGATCAGTACTTCGATGAATATAGGCGTCCTCTGTATGTGCTGGCC

mRNA sequence

ATGCCTTCTCGCTGCGAGATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGTACTGTTGAGTTTTGTATATGCCTTCTCTTGACGTTTCTCGGTTATATTCCTGGAATAATCTACGCCTTGTATGCCATCGTTTTCATTGATCGCGATCAGTACTTCGATGAATATAGGCGTCCTCTGTATGTGCTGGCC

Coding sequence (CDS)

ATGCCTTCTCGCTGCGAGATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCACGGATGTTGTACTGTTGAGTTTTGTATATGCCTTCTCTTGACGTTTCTCGGTTATATTCCTGGAATAATCTACGCCTTGTATGCCATCGTTTTCATTGATCGCGATCAGTACTTCGATGAATATAGGCGTCCTCTGTATGTGCTGGCC

Protein sequence

MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQYFDEYRRPLYVLA

Homology

[Close]

BLAST of MS002325 vs. NCBI nr
Match: XP_022135490.1 (UPF0057 membrane protein At4g30660-like [Momordica charantia])

HSP 1 Score: 157.1 bits (396), Expect = 5.8e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          DQYFDEYRRPLYVLA
Sbjct: 61 DQYFDEYRRPLYVLA 75

[Close]

BLAST of MS002325 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          D+YFDEYRRPLY  A
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of MS002325 vs. NCBI nr
Match: XP_004146673.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_019763 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          ++YFDEYRRPLY  A
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of MS002325 vs. NCBI nr
Match: XP_038879686.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          D+YFDEYRRPLY  A
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of MS002325 vs. NCBI nr
Match: PQP98405.1 (UPF0057 membrane protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYIPGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DQYFDEYRRPLYV 74
          D+YFDEYRRPLYV
Sbjct: 61 DEYFDEYRRPLYV 73

[Close]

BLAST of MS002325 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.4e-28
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQYFDEYRRPLYVLA 76
          D+YFDEYRRP+Y +A
Sbjct: 61 DEYFDEYRRPIYYVA 75

[Close]

BLAST of MS002325 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-27
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQYFDEYRRPLY 73
          ++YFDEYRRP+Y
Sbjct: 61 EEYFDEYRRPIY 72

[Close]

BLAST of MS002325 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.2e-20
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGYIPGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of MS002325 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.9e-19
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 4  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDRDQY 63
          RC  F EIL+AI++PPLGV LR GCC++EFCICLLLT LGY+PGIIYA+Y +V +D DQY
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]

BLAST of MS002325 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-10
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 10 EILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAI 56
          +ILIAI++PPLGV L+ G C  EF ICLLLTFLGYIPGIIYA+YAI
Sbjct: 9  DILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAI 53

[Close]

BLAST of MS002325 vs. ExPASy TrEMBL
Match: A0A6J1C169 (UPF0057 membrane protein At4g30660-like OS=Momordica charantia OX=3673 GN=LOC111007433 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.8e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          DQYFDEYRRPLYVLA
Sbjct: 61 DQYFDEYRRPLYVLA 75

[Close]

BLAST of MS002325 vs. ExPASy TrEMBL
Match: A0A1S3B9R0 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          D+YFDEYRRPLY  A
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of MS002325 vs. ExPASy TrEMBL
Match: A0A0A0LTR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.8e-33
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DQYFDEYRRPLYVLA 76
          ++YFDEYRRPLY  A
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of MS002325 vs. ExPASy TrEMBL
Match: A0A314Z9A4 (UPF0057 membrane protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_21988 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.6e-33
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYIPGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DQYFDEYRRPLYV 74
          D+YFDEYRRPLYV
Sbjct: 61 DEYFDEYRRPLYV 73

[Close]

BLAST of MS002325 vs. ExPASy TrEMBL
Match: A0A6P5SJT5 (UPF0057 membrane protein At4g30660-like OS=Prunus avium OX=42229 GN=LOC110756847 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-32
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT LGYIPGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAVLIPPLGVCLRHGCCTIEFCICLLLTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DQYFDEYRRPLY 73
          D+YFDEYRRPLY
Sbjct: 61 DEYFDEYRRPLY 72

[Close]

BLAST of MS002325 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 127.9 bits (320), Expect = 3.5e-30
Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT LGY+PGIIYALYAIV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DQYFDEYRRPLY 73
          DQ+FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of MS002325 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.4 bits (311), Expect = 3.9e-29
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQYFDEYRRPLYVLA 76
          D+YFDEYRRP+Y +A
Sbjct: 61 DEYFDEYRRPIYYVA 75

[Close]

BLAST of MS002325 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-28
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQYFDEYRRPLY 73
          ++YFDEYRRP+Y
Sbjct: 61 EEYFDEYRRPIY 72

[Close]

BLAST of MS002325 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-28
Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQYFDEYRRPLY 73
          ++YFDEYRRP+Y
Sbjct: 61 EEYFDEYRRPIY 72

[Close]

BLAST of MS002325 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGYIPGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of MS002325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135490.1	5.8e-35	100.00	UPF0057 membrane protein At4g30660-like [Momordica charantia]	[more]
XP_008443846.1	3.2e-33	94.67	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]	[more]
XP_004146673.1	1.2e-32	93.33	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical pr...	[more]
XP_038879686.1	1.6e-32	93.33	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
PQP98405.1	1.6e-32	93.15	UPF0057 membrane protein [Prunus yedoensis var. nudiflora]	[more]

BLAST of MS002325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82232	5.4e-28	74.67	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9SUI0	2.1e-27	76.39	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
Q9M095	4.2e-20	77.05	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	7.9e-19	68.75	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
A2Y075	3.0e-10	76.09	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]

BLAST of MS002325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C169	2.8e-35	100.00	UPF0057 membrane protein At4g30660-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3B9R0	1.5e-33	94.67	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 ...	[more]
A0A0A0LTR2	5.8e-33	93.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1	[more]
A0A314Z9A4	7.6e-33	93.15	UPF0057 membrane protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_21...	[more]
A0A6P5SJT5	2.2e-32	93.06	UPF0057 membrane protein At4g30660-like OS=Prunus avium OX=42229 GN=LOC110756847...	[more]

BLAST of MS002325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	3.5e-30	80.56	Low temperature and salt responsive protein family	[more]
AT2G24040.1	3.9e-29	74.67	Low temperature and salt responsive protein family	[more]
AT4G30660.1	1.5e-28	76.39	Low temperature and salt responsive protein family	[more]
AT4G30660.2	1.5e-28	76.39	Low temperature and salt responsive protein family	[more]
AT4G30650.1	3.0e-21	77.05	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 9..56 e-value: 3.7E-17 score: 62.3
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF93	BNAA03G50460D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002325.1	MS002325.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane