MS002268 (gene) Bitter gourd (TR) v1

Overview
NameMS002268
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpathogenesis-related protein PR-1-like
Locationscaffold30: 3715820 .. 3716347 (+)
RNA-Seq ExpressionMS002268
SyntenyMS002268
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAAAAAGAGAAACAAAAATGGATGTAAATCTTGTAATCCCCATCGCCATTTTGGTCCTCCTAAGCTCAAGCGGCAGCAGCGGCGCCGCGGCCCCGGCGAGGAACGACCGAGCCCTGCAGAAGCAATTCCTGGCCCCTCACAATGCCGCCAGATATGCGCTCCGATTAGCTCCGCTGGTGTGGGACGCGAAATTGGCCCGCTACGCACAGTCGTACGCCAACAAGCGGCGGGGGGATTGCGCTCTCCGGCACTCCGGCGGGCCTTACGGCGAAAATATCTTCTGGGGCAGCGGCAACGCATGGACTCCGGCGCAGGCCGTCGCCGATTGGGTGTCGGAGCGGCAATGGTACAGCTACTGGGCCAATTCTTGCGTGGAGGGGGAACTGTGTGGGCATTACACGCAGATTGTGTGGCGGTCCACGCGCCGGATTGGGTGCGCCCGAGTCACCTGTAACGCCGGCAGGGGCGTCTTCATCACTTGCAATTACGACCCTCCGGGTAATTACATTGGGGAGAGACCTTAT

mRNA sequence

AGAAAAAAAAGAGAAACAAAAATGGATGTAAATCTTGTAATCCCCATCGCCATTTTGGTCCTCCTAAGCTCAAGCGGCAGCAGCGGCGCCGCGGCCCCGGCGAGGAACGACCGAGCCCTGCAGAAGCAATTCCTGGCCCCTCACAATGCCGCCAGATATGCGCTCCGATTAGCTCCGCTGGTGTGGGACGCGAAATTGGCCCGCTACGCACAGTCGTACGCCAACAAGCGGCGGGGGGATTGCGCTCTCCGGCACTCCGGCGGGCCTTACGGCGAAAATATCTTCTGGGGCAGCGGCAACGCATGGACTCCGGCGCAGGCCGTCGCCGATTGGGTGTCGGAGCGGCAATGGTACAGCTACTGGGCCAATTCTTGCGTGGAGGGGGAACTGTGTGGGCATTACACGCAGATTGTGTGGCGGTCCACGCGCCGGATTGGGTGCGCCCGAGTCACCTGTAACGCCGGCAGGGGCGTCTTCATCACTTGCAATTACGACCCTCCGGGTAATTACATTGGGGAGAGACCTTAT

Coding sequence (CDS)

AGAAAAAAAAGAGAAACAAAAATGGATGTAAATCTTGTAATCCCCATCGCCATTTTGGTCCTCCTAAGCTCAAGCGGCAGCAGCGGCGCCGCGGCCCCGGCGAGGAACGACCGAGCCCTGCAGAAGCAATTCCTGGCCCCTCACAATGCCGCCAGATATGCGCTCCGATTAGCTCCGCTGGTGTGGGACGCGAAATTGGCCCGCTACGCACAGTCGTACGCCAACAAGCGGCGGGGGGATTGCGCTCTCCGGCACTCCGGCGGGCCTTACGGCGAAAATATCTTCTGGGGCAGCGGCAACGCATGGACTCCGGCGCAGGCCGTCGCCGATTGGGTGTCGGAGCGGCAATGGTACAGCTACTGGGCCAATTCTTGCGTGGAGGGGGAACTGTGTGGGCATTACACGCAGATTGTGTGGCGGTCCACGCGCCGGATTGGGTGCGCCCGAGTCACCTGTAACGCCGGCAGGGGCGTCTTCATCACTTGCAATTACGACCCTCCGGGTAATTACATTGGGGAGAGACCTTAT

Protein sequence

RKKRETKMDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY
Homology
BLAST of MS002268 vs. NCBI nr
Match: XP_022135282.1 (pathogenesis-related protein PR-1-like [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 5.2e-95
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA
Sbjct: 1   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARVTCNAG GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNAGGGVFITCNYDPPGNYIGERPY 169

BLAST of MS002268 vs. NCBI nr
Match: XP_022988522.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 318.2 bits (814), Expect = 4.6e-83
Identity = 146/169 (86.39%), Postives = 153/169 (90.53%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI++ L SS    AAAP R+DR LQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV+DWVSER+WYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARVTCN G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

BLAST of MS002268 vs. NCBI nr
Match: XP_022921796.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 145/169 (85.80%), Postives = 152/169 (89.94%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI++ L SS    AAAP R+DR LQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV+DWVSER+WYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GEL GHYTQIVWRSTRRIGCARVTCN G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

BLAST of MS002268 vs. NCBI nr
Match: XP_022929438.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI +LLSS+G +  AA  ++D+ALQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFILLSSTGHA-TAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAVADWVSER+WYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARVTC  G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

BLAST of MS002268 vs. NCBI nr
Match: XP_004146301.1 (pathogenesis-related protein PR-1 [Cucumis sativus] >KGN65424.1 hypothetical protein Csa_019918 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 4.3e-81
Identity = 143/165 (86.67%), Postives = 152/165 (92.12%), Query Frame = 0

Query: 12  LVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQ 71
           L+IPI IL+LL+S+  + AA   R+DR LQKQFLAPHNAARYALRL+PLVWD KLARYAQ
Sbjct: 6   LIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQ 65

Query: 72  SYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVEGELC 131
           SYANKRRGDCALRHSGGPYGENIFWGSG  WTPAQAVADWVSER+WYSYWANSCVEGELC
Sbjct: 66  SYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCVEGELC 125

Query: 132 GHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GHYTQIVWRSTRRIGCARVTCN G+GVFITCNYDPPGNYIG RPY
Sbjct: 126 GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

BLAST of MS002268 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.7e-57
Identity = 99/162 (61.11%), Postives = 119/162 (73.46%), Query Frame = 0

Query: 18  ILVLLSSSGSSGAAAPAR---NDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYA 77
           +L+L   S  S +  P +     R+ + QFL P N AR A+ L PLVWD KL  YAQ YA
Sbjct: 12  LLLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYA 71

Query: 78  NKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHY 137
           N+RR DCAL HS GPYGENIFWGSG  W PAQAV+ WV E+Q+Y+YW NSCV+GE+CGHY
Sbjct: 72  NQRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHY 131

Query: 138 TQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           TQ+VW ST ++GCA V C+  +G F+TCNYDPPGNY GERPY
Sbjct: 132 TQVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 173

BLAST of MS002268 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.2e-47
Identity = 84/162 (51.85%), Postives = 117/162 (72.22%), Query Frame = 0

Query: 16  IAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYAN 75
           +AIL+ L+ + +    + A+N     + +++PHNAAR A+ +  + W  KL  +AQ+YAN
Sbjct: 6   LAILLALAMAAAMVNLSQAQNS---PQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYAN 65

Query: 76  KRRGDCALRHSGGPYGENIFWGSGNA-WTPAQAVADWVSERQWYSYWANSCVEGELCGHY 135
           +R  DC L+HSGGPYGENIFWGS  A W  A AV  WV+E++ Y+Y +N+C  G++CGHY
Sbjct: 66  QRINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHY 125

Query: 136 TQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           TQ+VWR++  IGCARV CN  RGVFITCNY+P GN +G++PY
Sbjct: 126 TQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

BLAST of MS002268 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.2e-47
Identity = 85/162 (52.47%), Postives = 116/162 (71.60%), Query Frame = 0

Query: 16  IAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYAN 75
           +AIL+ L+ + +    + A+N     + +++PHNAAR A+ +  + W  KL  +AQ+YAN
Sbjct: 6   LAILLALAMAAAMVNLSQAQNS---PQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYAN 65

Query: 76  KRRGDCALRHSGGPYGENIFWGSGNA-WTPAQAVADWVSERQWYSYWANSCVEGELCGHY 135
           +R  DC L+HSGGPYGENIFWGS  A W  + AV  WVSE++ Y Y +N+C  G++CGHY
Sbjct: 66  QRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHY 125

Query: 136 TQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           TQ+VWR++  IGCARV CN  RGVFITCNY+P GN IG++PY
Sbjct: 126 TQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

BLAST of MS002268 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 84/162 (51.85%), Postives = 115/162 (70.99%), Query Frame = 0

Query: 16  IAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYAN 75
           + IL+ L+ S +    + A+N     + +++PHNAAR A+ +  + W  KL  +AQ+YAN
Sbjct: 6   LVILLALAMSAAMVNLSQAQNS---PQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYAN 65

Query: 76  KRRGDCALRHSGGPYGENIFWGSGNA-WTPAQAVADWVSERQWYSYWANSCVEGELCGHY 135
           +R  DC L+HSGGPYGENIFWGS  A W  + AV  WVSE++ Y Y +N+C  G++CGHY
Sbjct: 66  QRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHY 125

Query: 136 TQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           TQ+VWR++  IGCARV CN  RGVFITCNY+P GN +G++PY
Sbjct: 126 TQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

BLAST of MS002268 vs. ExPASy Swiss-Prot
Match: Q00008 (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 84/162 (51.85%), Postives = 111/162 (68.52%), Query Frame = 0

Query: 16  IAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYAN 75
           +A+L+L     ++ A  P+ ++ + Q  +L P N+AR A+ + P+ W  KL ++A+ YA 
Sbjct: 7   LAVLLLWLVMAAATAVHPSYSENSPQ-DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAA 66

Query: 76  KRRGDCALRHSGGPYGENIFWGS-GNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHY 135
           +R GDC L+HSGGPYGENIFWGS G  W    AV  WV E+QWY+Y  NSC  G++CGHY
Sbjct: 67  QRAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHY 126

Query: 136 TQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           TQ+VWR+T  IGCARV C   RGVFI CNY+P GN  G +PY
Sbjct: 127 TQVVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

BLAST of MS002268 vs. ExPASy TrEMBL
Match: A0A6J1C296 (pathogenesis-related protein PR-1-like OS=Momordica charantia OX=3673 GN=LOC111007284 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.5e-95
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA
Sbjct: 1   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARVTCNAG GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNAGGGVFITCNYDPPGNYIGERPY 169

BLAST of MS002268 vs. ExPASy TrEMBL
Match: A0A6J1JD89 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485737 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.2e-83
Identity = 146/169 (86.39%), Postives = 153/169 (90.53%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI++ L SS    AAAP R+DR LQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV+DWVSER+WYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARVTCN G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

BLAST of MS002268 vs. ExPASy TrEMBL
Match: A0A6J1E2D3 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429942 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.5e-82
Identity = 145/169 (85.80%), Postives = 152/169 (89.94%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI++ L SS    AAAP R+DR LQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV+DWVSER+WYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GEL GHYTQIVWRSTRRIGCARVTCN G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

BLAST of MS002268 vs. ExPASy TrEMBL
Match: A0A6J1ES44 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111436010 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.1e-82
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI +LLSS+G +  AA  ++D+ALQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFILLSSTGHA-TAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAVADWVSER+WYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARVTC  G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

BLAST of MS002268 vs. ExPASy TrEMBL
Match: A0A6J1KI73 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111496008 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 143/169 (84.62%), Postives = 155/169 (91.72%), Query Frame = 0

Query: 8   MDVNLVIPIAILVLLSSSGSSGAAAPARNDRALQKQFLAPHNAARYALRLAPLVWDAKLA 67
           M   L+IPIAI +LLSS+G +  AA  ++D+ALQKQFL PHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFILLSSTGHA-TAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 68  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVE 127
           RYAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAVADWVSER+WYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 128 GELCGHYTQIVWRSTRRIGCARVTCNAGRGVFITCNYDPPGNYIGERPY 177
           GELCGHYTQIVWRSTRRIGCARV+C  G+GVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVSCKQGKGVFITCNYDPPGNYIGERPY 168

BLAST of MS002268 vs. TAIR 10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-55
Identity = 92/136 (67.65%), Postives = 111/136 (81.62%), Query Frame = 0

Query: 41  QKQFLAPHNAARYALRLAPLVWDAKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGN 100
           Q+QF+ P NAAR  LRL PL WDAKLARYAQ +AN+RRGDCAL HS GPYGEN+FWGSGN
Sbjct: 27  QEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGN 86

Query: 101 AWTPAQAVADWVSERQWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNAGRGVFI 160
            W P+QA   W+SE + Y+Y +NSC   E+CGHYTQIVW++T++IGCA V CN G GVF+
Sbjct: 87  RWGPSQAAYGWLSEARSYNYRSNSC-NSEMCGHYTQIVWKNTQKIGCAHVICNGGGGVFL 146

Query: 161 TCNYDPPGNYIGERPY 177
           TCNYDPPGN++G +PY
Sbjct: 147 TCNYDPPGNFLGRKPY 161

BLAST of MS002268 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 8.4e-51
Identity = 84/138 (60.87%), Postives = 104/138 (75.36%), Query Frame = 0

Query: 39  ALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYANKRRGDCALRHSGGPYGENIFWGS 98
           ++ + FL PHNA R  L L PL+WD KLA YA  +AN+RR DC+L HS GPYGEN+FWGS
Sbjct: 70  SIARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGS 129

Query: 99  GNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNAGRGV 158
           G++W P  AV  W+ E + Y++  NSC    +CGHYTQ+VWR T+R+GCARV C  G GV
Sbjct: 130 GSSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGV 189

Query: 159 FITCNYDPPGNYIGERPY 177
           FITCNYDPPGNY+GE+PY
Sbjct: 190 FITCNYDPPGNYVGEKPY 207

BLAST of MS002268 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 84/138 (60.87%), Postives = 102/138 (73.91%), Query Frame = 0

Query: 39  ALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYANKRRGDCALRHSGGPYGENIFWGS 98
           + ++QFL PHN  R  L L PLVWD K+A YA  +AN+RR DC+L HS GPYGEN+FWGS
Sbjct: 73  SFEQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGS 132

Query: 99  GNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNAGRGV 158
           G+ +T   AV  W  E + Y++  N+C    +CGHYTQIVWR TRR+GCARV C  G GV
Sbjct: 133 GSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGV 192

Query: 159 FITCNYDPPGNYIGERPY 177
           FITCNYDPPGNY+GE+PY
Sbjct: 193 FITCNYDPPGNYVGEKPY 210

BLAST of MS002268 vs. TAIR 10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 6.7e-48
Identity = 84/138 (60.87%), Postives = 105/138 (76.09%), Query Frame = 0

Query: 43  QFLAPHNAARYALRLAPLVWDAKLARYAQSYANKRRGDCALRH--SGGPY--GENIFWGS 102
           QFL  HN  R A    PL+WD +L  YAQ +AN+RRGDCALRH  S G +  GENI+WG 
Sbjct: 54  QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query: 103 GNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNAGRGV 162
           G  W+PA AV  W SE+++Y Y +N+C  G++CGHYTQIVW+STRR+GCARV C+ G G+
Sbjct: 114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNG-GI 173

Query: 163 FITCNYDPPGNYIGERPY 177
           F+TCNYDPPGNYIG++PY
Sbjct: 174 FMTCNYDPPGNYIGQKPY 190

BLAST of MS002268 vs. TAIR 10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.2e-42
Identity = 80/145 (55.17%), Postives = 93/145 (64.14%), Query Frame = 0

Query: 32  APARNDRALQKQFLAPHNAARYALRLAPLVWDAKLARYAQSYANKRRGDCALRHSGGPYG 91
           A ARN   +Q+QFL PHN  R  LRL PL W   LA YA  +A  RRGDC L HSGGPYG
Sbjct: 44  ALARN--TIQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLIHSGGPYG 103

Query: 92  ENIFWGSGNAWTPAQAVADWVSERQWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVT 151
           EN+FWGSG  WTP  AVA W SE ++Y    + C     C HYTQ+VW+ + RIGCA   
Sbjct: 104 ENLFWGSGKGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISF 163

Query: 152 CNAGRGVFITCNYDPPGNYIGERPY 177
           C  G   FI CNYDPPGN +G+ P+
Sbjct: 164 CKTG-DTFIICNYDPPGNIVGQPPF 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022135282.15.2e-9599.41pathogenesis-related protein PR-1-like [Momordica charantia][more]
XP_022988522.14.6e-8386.39pathogenesis-related protein PR-1-like [Cucurbita maxima][more]
XP_022921796.11.1e-8185.80pathogenesis-related protein PR-1-like [Cucurbita moschata][more]
XP_022929438.11.5e-8185.21pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 path... [more]
XP_004146301.14.3e-8186.67pathogenesis-related protein PR-1 [Cucumis sativus] >KGN65424.1 hypothetical pro... [more]
Match NameE-valueIdentityDescription
Q403747.7e-5761.11Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV... [more]
P357927.2e-4751.85Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
Q059687.2e-4752.47Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P357931.2e-4651.85Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
Q000081.2e-4651.85Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1C2962.5e-9599.41pathogenesis-related protein PR-1-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1JD892.2e-8386.39pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114857... [more]
A0A6J1E2D35.5e-8285.80pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11142... [more]
A0A6J1ES447.1e-8285.21pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1KI732.1e-8184.62pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114960... [more]
Match NameE-valueIdentityDescription
AT4G30320.11.5e-5567.65CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT5G57625.18.4e-5160.87CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G25790.11.2e-4960.87CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G25780.16.7e-4860.87CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G31470.13.2e-4255.17CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 159..172
score: 55.56
coord: 107..120
score: 37.37
coord: 131..147
score: 61.98
coord: 60..78
score: 42.38
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 28..176
IPR002413Venom allergen 5-likePRINTSPR00838V5ALLERGENcoord: 60..78
score: 46.05
coord: 130..149
score: 55.31
IPR014044CAP domainSMARTSM00198SCP_3coord: 39..172
e-value: 1.5E-57
score: 207.1
IPR014044CAP domainPFAMPF00188CAPcoord: 45..164
e-value: 3.8E-24
score: 85.9
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 39..176
e-value: 5.7E-44
score: 151.8
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 33..176
NoneNo IPR availablePANTHERPTHR10334:SF489CYSTEINE-RICH SECRETORY PROTEIN, ALLERGEN V5/TPX-1-RELATED PROTEIN-RELATEDcoord: 28..176
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 41..176
e-value: 2.94949E-89
score: 255.251
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 132..142
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 159..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS002268.1MS002268.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region