MS002262 (gene) Bitter gourd (TR) v1

Overview


Name	MS002262
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box protein PP2-B10-like
Location	scaffold30: 3680165 .. 3682180 (+)
RNA-Seq Expression	MS002262
Synteny	MS002262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAAGAAAAGAGGAGAGGACCGGAAGGGGAAGAAGTTGCTGATTTATCTTCGCTGCCCGAAGGAGTAATGGCCAAAATACTGTCACTTACGACCCCATCCGATGCATGCAGGTCGTCGATGGTTTCCAGGGCTTTCCACGCGGCGGCGCAGTCAGATATCGTGTGGGACAGATTCCTGCCTACCGATTGGGAGCTTTTGATTTCTTGGATCAAACCTAGTGATCTCAATCTTGATCCGACTTCATGTTCGAAGAAGGACATCTTTTTCGCCCTTTCCGGTGCTCATTGATGACGGGAACAAGGTAAGTTTTCCAATTCCCCCAATTTCTCCAAATTGGAGGTGGCCGGAGTTAGATGCGTACTCCGGCCGTCGCCGTCGTCGGAGTTTGAGTTCATTTCAAGTTCCTCTTTTACCTTAGTCGTCAATGTCATGCATGGATTATTTCTAAAACTTGTGAAATTATCTCTGGAAAGGTTCGCATGCATTTCATTGTCAATGAGTGGTTGAAATCCCCAATCCAATTCTTTTATGATATTTTTTTTTTTATTTCTTGTTAATGTGTGAAGTTTGATTGAAATTCTCTCGTATCGAAGTTCTGACTTCTGATCTTCTGTTTCGTCAGTCAAAAAAATTCTTATGCTCATTGTAGCGCTTCACTTTTTGTTGCCCTAAATCTAACTTTTTTCACAACAGCAACTGCACAACTATCTGGTTACATCTTAAATTTGCGTAAGTGCTGATGTTTATAAAGTTGTAATTGATTAATGGTTCTAGACTTTCAGATTTTCACAACAGCAACTGGACAAATATCTGGTTACATCTTAAAGGTTGCTAGGATTTCTAAACTTTTAGAGTTCGACCACAAACAACTTTTCACATTAAACTTATGTTACTCCTCACTGACGGTATGATAATTTTGGAAGCTTTAACAAAGATAATAATTGGAAGCTTTAACAAAAGATAAAAGACAGATAAGTCATAGGGACTAAATTGAAACTAAAAGCACAGAGACTAGAAATTCAATCTAAACTTGTTCTCAATCACCTTTAACATGTTGAGTTTAAAAGGAAAAAAGAAAAAGGAAGAGAAATTAAGTTGCATCTGACGCCAATATCAGGTCCAGATCATTAGTTTTAGTTCCCTCTAAGGGAAGTTTTGAAGTATGAATAGTAATAGATTGTGTACACTTATATCAGTCGTACTCACAAAGATCAGATAGCCACTAGTTCATATGTATATCTTTTGCCATTTGTTGAATTAGTGATGAAGTTATTGTTCTGCACTTTCTCTTAAATTGAGTGGGTTCAATCGTTGGTATGGAGCAGAGCTTGTCATTGGACATATGGACTGGTAAGAAATGCATAATGCTTCGAGCAAGGGAGCTATCGATTCGTCGGAGTGAAGATAACTCTTCCTATTGGACCTGGGAACCTCATCATCGATCGAAGTTGGAGTCTACGAGATTGGCTCAAATCCCATTCTGTATGCTGTTTCTCTTCCTCTCAATTCTAATACTTTGCCTCTTAATGTGGGTGTGAGAAACAGGTTTCCCGAGGTTGGCGTGCTCCATGATGTCTGGTGGTTTGAAATGCACGGAAAGATAAGTTGCAGAACCTTGTCTCCCGCAATAACTTACACAGCTCACTTTGTGTTCAAGATCAAGAAACGTAAATATTATGGATTCGATTTTGATCCTGTTGATGCCACGGTGGGAATCACCGGCGGTGAAAGTTGTACAAAGAGTGTCTGTTTGGACCCTTACTTGGACAACCCTCAATGGTTGCCCAGCGCATACCATGGGCAGGGAGCAATCTGCCTAAAAACAACATGTCGGAGTTGGAGCAGCTGAGGACAAGACCTGATGGCTGGTTCGAAATCGAGATGGGAGAGTTTCGAACTGATGGTGCAGGCGATGAAGTTGAGGTTGTTCTTATGGAGTTCAATGGCAGTTCTCCTAAGAGTGGCCTCGTTGTTGAGGGGATAGAGATGAGGCCTAAAATTCTTGAAGAC

mRNA sequence

ATGGAGCAAGAAAAGAGGAGAGGACCGGAAGGGGAAGAAGTTGCTGATTTATCTTCGCTGCCCGAAGGAGTAATGGCCAAAATACTGTCACTTACGACCCCATCCGATGCATGCAGGTCGTCGATGGTTTCCAGGGCTTTCCACGCGGCGGCGCAGTCAGATATCGTGTGGGACAGATTCCTGCCTACCGATTGGGAGCTTTTGATTTCTTGGATCAAACCTAGTGATCTCAATCTTGATCCGACTTCATGTTCGAAGAAGGACATCTTTTTCGCCCTTTCCGTGGGTTCAATCGTTGGTATGGAGCAGAGCTTGTCATTGGACATATGGACTGGTAAGAAATGCATAATGCTTCGAGCAAGGGAGCTATCGATTCGTCGGAGTGAAGATAACTCTTCCTATTGGACCTGGGAACCTCATCATCGATCGAAGTTTCCCGAGGTTGGCGTGCTCCATGATGTCTGGTGGTTTGAAATGCACGGAAAGATAAGTTGCAGAACCTTGTCTCCCGCAATAACTTACACAGCTCACTTTGTGTTCAAGATCAAGAAACGTAAATATTATGGATTCGATTTTGATCCTGTTGATGCCACGGTGGGAATCACCGGCGGTGAAAGTTGTACAAAGAGTGTCTGTTTGGACCCTTACTTGGACAACCCTCAATGGCAGCGCATACCATGGGCAGGGAGCAATCTGCCTAAAAACAACATGTCGGAGTTGGAGCAGCTGAGGACAAGACCTGATGGCTGGTTCGAAATCGAGATGGGAGAGTTTCGAACTGATGGTGCAGGCGATGAAGTTGAGGTTGTTCTTATGGAGTTCAATGGCAGTTCTCCTAAGAGTGGCCTCGTTGTTGAGGGGATAGAGATGAGGCCTAAAATTCTTGAAGAC

Coding sequence (CDS)

ATGGAGCAAGAAAAGAGGAGAGGACCGGAAGGGGAAGAAGTTGCTGATTTATCTTCGCTGCCCGAAGGAGTAATGGCCAAAATACTGTCACTTACGACCCCATCCGATGCATGCAGGTCGTCGATGGTTTCCAGGGCTTTCCACGCGGCGGCGCAGTCAGATATCGTGTGGGACAGATTCCTGCCTACCGATTGGGAGCTTTTGATTTCTTGGATCAAACCTAGTGATCTCAATCTTGATCCGACTTCATGTTCGAAGAAGGACATCTTTTTCGCCCTTTCCGTGGGTTCAATCGTTGGTATGGAGCAGAGCTTGTCATTGGACATATGGACTGGTAAGAAATGCATAATGCTTCGAGCAAGGGAGCTATCGATTCGTCGGAGTGAAGATAACTCTTCCTATTGGACCTGGGAACCTCATCATCGATCGAAGTTTCCCGAGGTTGGCGTGCTCCATGATGTCTGGTGGTTTGAAATGCACGGAAAGATAAGTTGCAGAACCTTGTCTCCCGCAATAACTTACACAGCTCACTTTGTGTTCAAGATCAAGAAACGTAAATATTATGGATTCGATTTTGATCCTGTTGATGCCACGGTGGGAATCACCGGCGGTGAAAGTTGTACAAAGAGTGTCTGTTTGGACCCTTACTTGGACAACCCTCAATGGCAGCGCATACCATGGGCAGGGAGCAATCTGCCTAAAAACAACATGTCGGAGTTGGAGCAGCTGAGGACAAGACCTGATGGCTGGTTCGAAATCGAGATGGGAGAGTTTCGAACTGATGGTGCAGGCGATGAAGTTGAGGTTGTTCTTATGGAGTTCAATGGCAGTTCTCCTAAGAGTGGCCTCGTTGTTGAGGGGATAGAGATGAGGCCTAAAATTCTTGAAGAC

Protein sequence

MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIVGMEQSLSLDIWTGKKCIMLRARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKILED

Homology

[Close]

BLAST of MS002262 vs. NCBI nr
Match: XP_022134922.1 (F-box protein PP2-B10-like isoform X2 [Momordica charantia])

HSP 1 Score: 369.4 bits (947), Expect = 2.9e-98
Identity = 189/299 (63.21%), Postives = 224/299 (74.92%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+E   G EGEE+AD SSLPEGV+A ILSLT PSDACRSS VSRAFHAAAQSDIVWDRF
Sbjct: 1   MEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRF 60

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV---GMEQSLSLDIWTGKKCIM 120
           LPTDW  LI   KPSDLN+DP S SKK+IFF+L    ++   G + S SLD W+GKKCIM
Sbjct: 61  LPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIM 120

Query: 121 LRARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAH 180
           L AR+LSI    D S YWTWE H  S+F EV V+  VWW E+ GKIS   LSPA TY A+
Sbjct: 121 LGARDLSIVWG-DTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAY 180

Query: 181 FVFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNP--QWQRIPWAGSNLPKN 240
           FVF++++R+YYGF+ DPVDA VGI G E C KSVCLDPYLD+P  + +R+P AG+NLP+ 
Sbjct: 181 FVFRMRERRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPE- 240

Query: 241 NMSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKI 295
           NMS LEQ R R DGWFE E+GEF  DG  DEVE++L E   +  K  LVV+GI++RPK+
Sbjct: 241 NMSGLEQPRERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKV 297

[Close]

BLAST of MS002262 vs. NCBI nr
Match: XP_022134921.1 (F-box protein PP2-B10-like isoform X1 [Momordica charantia])

HSP 1 Score: 369.4 bits (947), Expect = 2.9e-98
Identity = 189/299 (63.21%), Postives = 224/299 (74.92%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+E   G EGEE+AD SSLPEGV+A ILSLT PSDACRSS VSRAFHAAAQSDIVWDRF
Sbjct: 21  MEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRF 80

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV---GMEQSLSLDIWTGKKCIM 120
           LPTDW  LI   KPSDLN+DP S SKK+IFF+L    ++   G + S SLD W+GKKCIM
Sbjct: 81  LPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIM 140

Query: 121 LRARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAH 180
           L AR+LSI    D S YWTWE H  S+F EV V+  VWW E+ GKIS   LSPA TY A+
Sbjct: 141 LGARDLSIVWG-DTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAY 200

Query: 181 FVFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNP--QWQRIPWAGSNLPKN 240
           FVF++++R+YYGF+ DPVDA VGI G E C KSVCLDPYLD+P  + +R+P AG+NLP+ 
Sbjct: 201 FVFRMRERRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPE- 260

Query: 241 NMSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKI 295
           NMS LEQ R R DGWFE E+GEF  DG  DEVE++L E   +  K  LVV+GI++RPK+
Sbjct: 261 NMSGLEQPRERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKV 317

[Close]

BLAST of MS002262 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-97
Identity = 188/297 (63.30%), Postives = 222/297 (74.75%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+EK +G EGEE++D SSLPEGV+AKILSLTTPSDACRSS VSR FHAAAQSDIVWD+ 
Sbjct: 2   MEEEKEKGTEGEEISDFSSLPEGVVAKILSLTTPSDACRSSAVSRTFHAAAQSDIVWDKL 61

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIML 120
           LPTDW+LLIS  KPS+LN DP S  KK+IFF+L    ++     +SLSL+ W+GKKCIML
Sbjct: 62  LPTDWKLLISRRKPSNLNFDPISSPKKEIFFSLCESPLLIDDGNKSLSLEKWSGKKCIML 121

Query: 121 RARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHF 180
            AR+LSI    D S YW+WE H  S+F EV VL DVWW E+ G+ISCR LSP  TY A+F
Sbjct: 122 GARDLSIVWG-DTSYYWSWEHHTDSRFAEVAVLLDVWWLEIRGRISCRMLSPKTTYAAYF 181

Query: 181 VFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNPQWQR--IPWAGSNLPKNN 240
           VFK+++R+YYGF+ +P DATVGI G E   KSVCLDPYLDNPQ +R   PW        +
Sbjct: 182 VFKMRQRRYYGFNINPADATVGILGTEPHRKSVCLDPYLDNPQRRRRHAPWM-MRPQSED 241

Query: 241 MSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPK 294
           M+ LE    R DGWFEIE+GEF +    DEVE+ LME  GSS KSGLVVEGIE+RPK
Sbjct: 242 MAGLEWPPERHDGWFEIELGEFESGDGDDEVEMALMEVKGSSAKSGLVVEGIEIRPK 296

[Close]

BLAST of MS002262 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 352.1 bits (902), Expect = 4.8e-93
Identity = 179/298 (60.07%), Postives = 221/298 (74.16%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME++     EGEE+ D S LPEGV+A ILSLTTP DACRSS VS  FHAAAQSDIVWDRF
Sbjct: 7   MEEKTSTATEGEEIDDFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRF 66

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIML 120
           LPTDW  L+S  KPSDLN DP S SKK+IFF+L    ++    ++S SLD  +GKKCIML
Sbjct: 67  LPTDWHDLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIML 126

Query: 121 RARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHF 180
            AR+LS+    D S YWTWE H  S+F EV VL +VWW E+ G+ISCR LSPA TY A+F
Sbjct: 127 GARDLSVVWG-DTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYF 186

Query: 181 VFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNPQWQR--IPWAGSNLPKNN 240
           VFK++KR+YYGF+ DP DA VG  G E+ +KSVCLDP++DNP  +R  +P A  + P  +
Sbjct: 187 VFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLA-VDQPPES 246

Query: 241 MSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKI 295
           M   E+ + R DGWFEIE+GEF++D   DE+E+VLME  G++PKSGLVV+GIE+RPKI
Sbjct: 247 MEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKI 302

[Close]

BLAST of MS002262 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 346.7 bits (888), Expect = 2.0e-91
Identity = 179/296 (60.47%), Postives = 210/296 (70.95%), Query Frame = 0


Query: 2   EQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFL 61
           E+E  R  EGEE++D SSLPEGV+AKILSLTTP DACRSS VSR FHAAAQSDIVW+ FL
Sbjct: 4   EKENGRAMEGEEISDFSSLPEGVVAKILSLTTPPDACRSSAVSRTFHAAAQSDIVWNEFL 63

Query: 62  PTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLR 121
           PTDWELLIS  KP  +  DP S  KKDIFF+L    ++     +SLSL+ W+GKK IML 
Sbjct: 64  PTDWELLISRRKPGKIKFDPISSPKKDIFFSLCYNPVLIDDGNKSLSLEKWSGKKRIMLG 123

Query: 122 ARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFV 181
           AR+LS+    D S YWTWE    S+F EV VL +VWW E+ G+ISCR LSP  TY  +FV
Sbjct: 124 ARDLSVVWG-DTSGYWTWEHRLESRFAEVAVLVNVWWLEIRGRISCRMLSPKTTYAVYFV 183

Query: 182 FKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNPQWQR--IPWAGSNLPKNNM 241
           F +++  YYGFD DP DATVGI G E+  +SVCLDPYLDNPQ +R   PW         M
Sbjct: 184 FNMRRCYYYGFDIDPADATVGILGTENHRRSVCLDPYLDNPQGRRRHAPWM-MRPQSEGM 243

Query: 242 SELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPK 294
           S LE+ + R DGWFEIE+GEF +    DEVE+ L E  GSS KSGLVVEGIE+RPK
Sbjct: 244 SGLERPQKRHDGWFEIELGEFESGDGDDEVEMALKELKGSSDKSGLVVEGIEIRPK 297

[Close]

BLAST of MS002262 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.8e-43
Identity = 106/289 (36.68%), Postives = 158/289 (54.67%), Query Frame = 0


Query: 13  EVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWI 72
           E +   S PE  ++ I+S T P DAC ++ VS+ F +  +SDI+W++FLP D+E   S I
Sbjct: 10  ESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYE---SLI 69

Query: 73  KPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSED 132
            PS +       SKK+++F+L    ++    ++S+ L+  +GK+C+ML A  LSI    D
Sbjct: 70  PPSRV-----FSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWG-D 129

Query: 133 NSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGF 192
           N  YW W P   S+F +V  L DV WFE+ G+ + R LSP   Y+A+ VFK    K YGF
Sbjct: 130 NPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGF 189

Query: 193 DFDPVDATVGITGGESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPDGW 252
               ++A VG+ G E   + +C                 S   +     + + + R DGW
Sbjct: 190 QNVAIEAAVGVVGQEPSRRLICF----------------SEAIRRGRRNVVKPKQREDGW 249

Query: 253 FEIEMGEFRTDGA---GDEVEVVLMEFNGSSPKSGLVVEGIEMRP-KIL 296
            EIE+GEF  DG     DE+E+  +E    + K GL+++GIE+RP KIL
Sbjct: 250 MEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAKIL 272

[Close]

BLAST of MS002262 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-42
Identity = 107/309 (34.63%), Postives = 161/309 (52.10%), Query Frame = 0


Query: 19  SLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIKPSDLN 78
           +LPE  ++K++S T+P DAC  + VS++  +AAQSD+VW+ FLP+++  L+         
Sbjct: 34  ALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVL-------- 93

Query: 79  LDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSEDNSSYWT 138
                 SKK+IF +L+  S++    ++S  ++  +GKKC ML A EL+I    D+ +YW 
Sbjct: 94  QSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWG-DSPAYWK 153

Query: 139 WEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFDFDPVD 198
           W     SKF +V  L +V WFE+ GKISC  LS    Y+ + VFK    + YGFD  PV+
Sbjct: 154 WITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVE 213

Query: 199 ATVGITGGESCTKSVCLD------------------PYLDNPQWQRIPWAGSNLPKNNMS 258
           A VG  G  +  KSV  +                    +      R PW      +    
Sbjct: 214 AGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEV 273

Query: 259 ELEQLR--------TRPDGWFEIEMGEFRTDGAG------DEVEVVLMEFNGSSPKSGLV 294
           E E+ R         R DGW E+E+G+F  +  G      DE+E+ +ME    + KSGL+
Sbjct: 274 EGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLI 333

[Close]

BLAST of MS002262 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.4e-41
Identity = 106/287 (36.93%), Postives = 162/287 (56.45%), Query Frame = 0


Query: 14  VADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIK 73
           VA+L  LPE  ++ I+S T+P DAC  + VS+ F +A +SDIVW++F+P ++E LIS  +
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 74  PSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSEDN 133
                      SKK+++FAL   S++    ++SL ++    K+CIM+ A  L+I      
Sbjct: 93  AFKF------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSP 152

Query: 134 SSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFD 193
            S W W P  +++F  V  L +V  FE+ G+I+ R +SP   Y+A+ V+K K    YGF+
Sbjct: 153 QS-WRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFE 212

Query: 194 FDPVDATVGITG---GESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPD 253
              V+  VG+ G    ESC + +C D  +D  Q++R    G NL K           R D
Sbjct: 213 NVAVEVVVGVVGQDLEESCRRYICFDETMDE-QFRRRD-RGKNLVKP--------ERRKD 272

Query: 254 GWFEIEMGEFRTDGA---GDEVEVVLMEFNGSSPKSGLVVEGIEMRP 293
           GW EI++GEF  +G     DE+E+V +E      K GL+++GIE+RP
Sbjct: 273 GWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of MS002262 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.8e-41
Identity = 100/275 (36.36%), Postives = 151/275 (54.91%), Query Frame = 0


Query: 20  LPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIKPSDLNL 79
           LPE  ++ I+S T+P DAC ++ VS+ F +A  SD VWD+FLP ++E L+S  +      
Sbjct: 64  LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR------ 123

Query: 80  DPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSEDNSSYWTW 139
                SKK+++FAL    ++    ++S  L+  +GK+CIML ++EL I     +  YW W
Sbjct: 124 --VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWG-SSPEYWQW 183

Query: 140 EPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFDFDPVDA 199
                S+F ++  L DV WFE+ GK S R LSP   Y+A+ VFK K R   G    PV+ 
Sbjct: 184 ISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDR-CPGLGHLPVEV 243

Query: 200 TVGITGGESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPDGWFEIEMGE 259
            +G+ G ES  + +    Y   P+ +R         +    ++ +   R DGW E E+GE
Sbjct: 244 GLGLVGQESSKRFI----YFIGPRDRR--------GRRETRDVTKPDQREDGWMEAELGE 303

Query: 260 FRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRP 293
           F  +   DE+E  ++E    S KSGL+++GIE RP
Sbjct: 304 FFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of MS002262 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 7.6e-41
Identity = 110/302 (36.42%), Postives = 166/302 (54.97%), Query Frame = 0


Query: 4   EKRRGPEGEEV--ADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFL 63
           EK R    +++  + L SLPEG ++ I+S T+P DAC ++ VS+ F +A +SDIVW++FL
Sbjct: 9   EKNRSESRKKIVSSTLDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFL 68

Query: 64  PTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLR 123
           PTD+E LI+   PS +       SKK+++F+L    ++    + SL L+  +GK+CIML 
Sbjct: 69  PTDYESLIT---PSRV-----FSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLS 128

Query: 124 ARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFV 183
           A  +++    D S  + W P   S+F  V  L + + FE + +++ R LS    Y+ + V
Sbjct: 129 ATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIV 188

Query: 184 FKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSE 243
           FK K   + GF    ++A VGI G ES    +C D +      +R   A   L       
Sbjct: 189 FK-KADNWCGFKGVSIEAVVGIVGEESFRSFICFDTHGKGQARKRKVVAKPEL------- 248

Query: 244 LEQLRTRPDGWFEIEMGEFRTDG---AGDEVEVVLMEFNGSSPKSGLVVEGIEMRP-KIL 298
                 R DGW E E+GEF  +G   + DEVE+  +E   +  K GLV+ GIE+RP KIL
Sbjct: 249 ------REDGWMETEIGEFYNEGGLMSSDEVEISTVEGKYAQQKRGLVILGIEIRPAKIL 288

[Close]

BLAST of MS002262 vs. ExPASy TrEMBL
Match: A0A6J1BZ47 (F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 189/299 (63.21%), Postives = 224/299 (74.92%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+E   G EGEE+AD SSLPEGV+A ILSLT PSDACRSS VSRAFHAAAQSDIVWDRF
Sbjct: 21  MEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRF 80

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV---GMEQSLSLDIWTGKKCIM 120
           LPTDW  LI   KPSDLN+DP S SKK+IFF+L    ++   G + S SLD W+GKKCIM
Sbjct: 81  LPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIM 140

Query: 121 LRARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAH 180
           L AR+LSI    D S YWTWE H  S+F EV V+  VWW E+ GKIS   LSPA TY A+
Sbjct: 141 LGARDLSIVWG-DTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAY 200

Query: 181 FVFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNP--QWQRIPWAGSNLPKN 240
           FVF++++R+YYGF+ DPVDA VGI G E C KSVCLDPYLD+P  + +R+P AG+NLP+ 
Sbjct: 201 FVFRMRERRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPE- 260

Query: 241 NMSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKI 295
           NMS LEQ R R DGWFE E+GEF  DG  DEVE++L E   +  K  LVV+GI++RPK+
Sbjct: 261 NMSGLEQPRERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKV 317

[Close]

BLAST of MS002262 vs. ExPASy TrEMBL
Match: A0A6J1C117 (F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 189/299 (63.21%), Postives = 224/299 (74.92%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+E   G EGEE+AD SSLPEGV+A ILSLT PSDACRSS VSRAFHAAAQSDIVWDRF
Sbjct: 1   MEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRF 60

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV---GMEQSLSLDIWTGKKCIM 120
           LPTDW  LI   KPSDLN+DP S SKK+IFF+L    ++   G + S SLD W+GKKCIM
Sbjct: 61  LPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIM 120

Query: 121 LRARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAH 180
           L AR+LSI    D S YWTWE H  S+F EV V+  VWW E+ GKIS   LSPA TY A+
Sbjct: 121 LGARDLSIVWG-DTSVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAY 180

Query: 181 FVFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNP--QWQRIPWAGSNLPKN 240
           FVF++++R+YYGF+ DPVDA VGI G E C KSVCLDPYLD+P  + +R+P AG+NLP+ 
Sbjct: 181 FVFRMRERRYYGFNIDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPE- 240

Query: 241 NMSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKI 295
           NMS LEQ R R DGWFE E+GEF  DG  DEVE++L E   +  K  LVV+GI++RPK+
Sbjct: 241 NMSGLEQPRERDDGWFETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKV 297

[Close]

BLAST of MS002262 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.3e-93
Identity = 179/298 (60.07%), Postives = 221/298 (74.16%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME++     EGEE+ D S LPEGV+A ILSLTTP DACRSS VS  FHAAAQSDIVWDRF
Sbjct: 7   MEEKTSTATEGEEIDDFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRF 66

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIML 120
           LPTDW  L+S  KPSDLN DP S SKK+IFF+L    ++    ++S SLD  +GKKCIML
Sbjct: 67  LPTDWHDLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIML 126

Query: 121 RARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHF 180
            AR+LS+    D S YWTWE H  S+F EV VL +VWW E+ G+ISCR LSPA TY A+F
Sbjct: 127 GARDLSVVWG-DTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYF 186

Query: 181 VFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLDNPQWQR--IPWAGSNLPKNN 240
           VFK++KR+YYGF+ DP DA VG  G E+ +KSVCLDP++DNP  +R  +P A  + P  +
Sbjct: 187 VFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLA-VDQPPES 246

Query: 241 MSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKI 295
           M   E+ + R DGWFEIE+GEF++D   DE+E+VLME  G++PKSGLVV+GIE+RPKI
Sbjct: 247 MEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKI 302

[Close]

BLAST of MS002262 vs. ExPASy TrEMBL
Match: A0A5A7UXV0 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006450 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 8.3e-91
Identity = 176/301 (58.47%), Postives = 216/301 (71.76%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+E++    GEE++D SSLPEGV+AKILS TTPSDACRSS+VS  F AAAQSDIVWD F
Sbjct: 1   MEEEEK----GEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSF 60

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIML 120
           LPTDWE+LIS  KPS+LN DP S SKK+IFF+L    ++     +S SLD W+GKKCIML
Sbjct: 61  LPTDWEILISRRKPSNLNFDPISSSKKEIFFSLCDTPLIIDDGNKSFSLDKWSGKKCIML 120

Query: 121 RARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHF 180
            ARELSI  S D  +YWTWEPH  S+F EV VL +VWW E+ GK+SC+ LSPA TY A+F
Sbjct: 121 GARELSIIWS-DMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYF 180

Query: 181 VFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLD--NPQWQRIPWAGSNLPKNN 240
           VFK+ +R+YYGFD    DA V I  GE C+  VCLDP+LD   P+ +R P    N   N+
Sbjct: 181 VFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPKRRRTPCLRRNPLGNS 240

Query: 241 MSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKILE 298
           MS  +Q + R DGWFE+E+GE   +G  DEVE  L E N +  KSGL+V+GI++RPKI  
Sbjct: 241 MSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKISR 296

[Close]

BLAST of MS002262 vs. ExPASy TrEMBL
Match: A0A5D3CBY5 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00980 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 8.3e-91
Identity = 176/301 (58.47%), Postives = 216/301 (71.76%), Query Frame = 0


Query: 1   MEQEKRRGPEGEEVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRF 60
           ME+E++    GEE++D SSLPEGV+AKILS TTPSDACRSS+VS  F AAAQSDIVWD F
Sbjct: 45  MEEEEK----GEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSF 104

Query: 61  LPTDWELLISWIKPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIML 120
           LPTDWE+LIS  KPS+LN DP S SKK+IFF+L    ++     +S SLD W+GKKCIML
Sbjct: 105 LPTDWEILISRRKPSNLNFDPISSSKKEIFFSLCDTPLIIDDGNKSFSLDKWSGKKCIML 164

Query: 121 RARELSIRRSEDNSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHF 180
            ARELSI  S D  +YWTWEPH  S+F EV VL +VWW E+ GK+SC+ LSPA TY A+F
Sbjct: 165 GARELSIIWS-DMPTYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYF 224

Query: 181 VFKIKKRKYYGFDFDPVDATVGITGGESCTKSVCLDPYLD--NPQWQRIPWAGSNLPKNN 240
           VFK+ +R+YYGFD    DA V I  GE C+  VCLDP+LD   P+ +R P    N   N+
Sbjct: 225 VFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPKRRRTPCLRRNPLGNS 284

Query: 241 MSELEQLRTRPDGWFEIEMGEFRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPKILE 298
           MS  +Q + R DGWFE+E+GE   +G  DEVE  L E N +  KSGL+V+GI++RPKI  
Sbjct: 285 MSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKISR 340

[Close]

BLAST of MS002262 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 176.4 bits (446), Expect = 3.4e-44
Identity = 106/289 (36.68%), Postives = 158/289 (54.67%), Query Frame = 0


Query: 13  EVADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWI 72
           E +   S PE  ++ I+S T P DAC ++ VS+ F +  +SDI+W++FLP D+E   S I
Sbjct: 10  ESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYE---SLI 69

Query: 73  KPSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSED 132
            PS +       SKK+++F+L    ++    ++S+ L+  +GK+C+ML A  LSI    D
Sbjct: 70  PPSRV-----FSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWG-D 129

Query: 133 NSSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGF 192
           N  YW W P   S+F +V  L DV WFE+ G+ + R LSP   Y+A+ VFK    K YGF
Sbjct: 130 NPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGF 189

Query: 193 DFDPVDATVGITGGESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPDGW 252
               ++A VG+ G E   + +C                 S   +     + + + R DGW
Sbjct: 190 QNVAIEAAVGVVGQEPSRRLICF----------------SEAIRRGRRNVVKPKQREDGW 249

Query: 253 FEIEMGEFRTDGA---GDEVEVVLMEFNGSSPKSGLVVEGIEMRP-KIL 296
            EIE+GEF  DG     DE+E+  +E    + K GL+++GIE+RP KIL
Sbjct: 250 MEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAKIL 272

[Close]

BLAST of MS002262 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43
Identity = 107/309 (34.63%), Postives = 161/309 (52.10%), Query Frame = 0


Query: 19  SLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIKPSDLN 78
           +LPE  ++K++S T+P DAC  + VS++  +AAQSD+VW+ FLP+++  L+         
Sbjct: 34  ALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVL-------- 93

Query: 79  LDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSEDNSSYWT 138
                 SKK+IF +L+  S++    ++S  ++  +GKKC ML A EL+I    D+ +YW 
Sbjct: 94  QSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWG-DSPAYWK 153

Query: 139 WEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFDFDPVD 198
           W     SKF +V  L +V WFE+ GKISC  LS    Y+ + VFK    + YGFD  PV+
Sbjct: 154 WITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVE 213

Query: 199 ATVGITGGESCTKSVCLD------------------PYLDNPQWQRIPWAGSNLPKNNMS 258
           A VG  G  +  KSV  +                    +      R PW      +    
Sbjct: 214 AGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEV 273

Query: 259 ELEQLR--------TRPDGWFEIEMGEFRTDGAG------DEVEVVLMEFNGSSPKSGLV 294
           E E+ R         R DGW E+E+G+F  +  G      DE+E+ +ME    + KSGL+
Sbjct: 274 EGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLI 333

[Close]

BLAST of MS002262 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-42
Identity = 106/287 (36.93%), Postives = 162/287 (56.45%), Query Frame = 0


Query: 14  VADLSSLPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIK 73
           VA+L  LPE  ++ I+S T+P DAC  + VS+ F +A +SDIVW++F+P ++E LIS  +
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 74  PSDLNLDPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSEDN 133
                      SKK+++FAL   S++    ++SL ++    K+CIM+ A  L+I      
Sbjct: 93  AFKF------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSP 152

Query: 134 SSYWTWEPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFD 193
            S W W P  +++F  V  L +V  FE+ G+I+ R +SP   Y+A+ V+K K    YGF+
Sbjct: 153 QS-WRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFE 212

Query: 194 FDPVDATVGITG---GESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPD 253
              V+  VG+ G    ESC + +C D  +D  Q++R    G NL K           R D
Sbjct: 213 NVAVEVVVGVVGQDLEESCRRYICFDETMDE-QFRRRD-RGKNLVKP--------ERRKD 272

Query: 254 GWFEIEMGEFRTDGA---GDEVEVVLMEFNGSSPKSGLVVEGIEMRP 293
           GW EI++GEF  +G     DE+E+V +E      K GL+++GIE+RP
Sbjct: 273 GWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of MS002262 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 169.5 bits (428), Expect = 4.1e-42
Identity = 100/275 (36.36%), Postives = 151/275 (54.91%), Query Frame = 0


Query: 20  LPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIKPSDLNL 79
           LPE  ++ I+S T+P DAC ++ VS+ F +A  SD VWD+FLP ++E L+S  +      
Sbjct: 64  LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR------ 123

Query: 80  DPTSCSKKDIFFALSVGSIV--GMEQSLSLDIWTGKKCIMLRARELSIRRSEDNSSYWTW 139
                SKK+++FAL    ++    ++S  L+  +GK+CIML ++EL I     +  YW W
Sbjct: 124 --VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWG-SSPEYWQW 183

Query: 140 EPHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFDFDPVDA 199
                S+F ++  L DV WFE+ GK S R LSP   Y+A+ VFK K R   G    PV+ 
Sbjct: 184 ISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDR-CPGLGHLPVEV 243

Query: 200 TVGITGGESCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMSELEQLRTRPDGWFEIEMGE 259
            +G+ G ES  + +    Y   P+ +R         +    ++ +   R DGW E E+GE
Sbjct: 244 GLGLVGQESSKRFI----YFIGPRDRR--------GRRETRDVTKPDQREDGWMEAELGE 303

Query: 260 FRTDGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRP 293
           F  +   DE+E  ++E    S KSGL+++GIE RP
Sbjct: 304 FFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of MS002262 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-38
Identity = 101/287 (35.19%), Postives = 152/287 (52.96%), Query Frame = 0


Query: 20  LPEGVMAKILSLTTPSDACRSSMVSRAFHAAAQSDIVWDRFLPTDWELLISWIKPSDLNL 79
           LPE  +A IL+ T+P+DA  SS VS  F  A  SD VW++FLP+D++ LIS       N+
Sbjct: 4   LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNI 63

Query: 80  DPTSCSKKDIFFALSVGSIVGMEQSL-SLDIWTGKKCIMLRARELSIRRSEDNSSYWTWE 139
                SKK+I+  L    ++   + L  ++ ++GK   +L AR++SI  S D++SYW+W 
Sbjct: 64  S----SKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHS-DHASYWSWS 123

Query: 140 PHHRSKFPEVGVLHDVWWFEMHGKISCRTLSPAITYTAHFVFKIKKRKYYGFDFDPVDAT 199
               S+F E   L      E+ GKI  R LS    Y A+ + K+ K   YG D  P + +
Sbjct: 124 NVSDSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGA-YGLDLVPAETS 183

Query: 200 VGITGGE---SCTKSVCLDPYLDNPQWQRIPWAGSNLPKNNMS--------ELEQLRTRP 259
           +    G+   S T   CLD   +  Q  +  + G+   +  M+        +  + + R 
Sbjct: 184 IKSKNGQISKSATYLCCLD---EKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRD 243

Query: 260 DGWFEIEMGEFRT-DGAGDEVEVVLMEFNGSSPKSGLVVEGIEMRPK 294
           DGW EIE+GEF T +G  DEV + L E  G   K G++++GIE+RPK
Sbjct: 244 DGWMEIELGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281

The following BLAST results are available for this feature:

BLAST of MS002262 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134922.1	2.9e-98	63.21	F-box protein PP2-B10-like isoform X2 [Momordica charantia]	[more]
XP_022134921.1	2.9e-98	63.21	F-box protein PP2-B10-like isoform X1 [Momordica charantia]	[more]
XP_038878468.1	1.1e-97	63.30	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_022135496.1	4.8e-93	60.07	F-box protein PP2-B10-like [Momordica charantia]	[more]
XP_038880064.1	2.0e-91	60.47	F-box protein PP2-B10-like [Benincasa hispida]	[more]

BLAST of MS002262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ6	4.8e-43	36.68	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q6NPT8	4.0e-42	34.63	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9ZVQ8	3.4e-41	36.93	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q3E6P4	5.8e-41	36.36	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9FV02	7.6e-41	36.42	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]

BLAST of MS002262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ47	1.4e-98	63.21	F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1C117	1.4e-98	63.21	F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1C0X7	2.3e-93	60.07	F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 S...	[more]
A0A5A7UXV0	8.3e-91	58.47	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3CBY5	8.3e-91	58.47	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of MS002262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02360.1	3.4e-44	36.68	phloem protein 2-B10	[more]
AT2G02230.1	2.9e-43	34.63	phloem protein 2-B1	[more]
AT2G02340.1	2.4e-42	36.93	phloem protein 2-B8	[more]
AT2G02240.1	4.1e-42	36.36	F-box family protein	[more]
AT1G56250.1	4.7e-38	35.19	phloem protein 2-B14	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 17..60 e-value: 1.5E-4 score: 21.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 14..60 score: 10.7692
None	No IPR available	GENE3D	1.20.1280.50		coord: 10..105 e-value: 7.1E-7 score: 31.1
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 9..294
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 9..294
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 113..292 e-value: 1.2E-43 score: 148.7
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 6..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002262.1	MS002262.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding