MS002250 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGGAGTAGCTTGCTGGGAAGGCTGCGGAAGGCGGTGAAGAAGGTGAGATTTATGATAAACTTCAGCATCCAAAGCTGGCGGTTGGCGGCCATGATGGGGCGGACTTCGTCGAGAAATCTACGGCTGAGCTTCAACGAACGGCCAGGATTGAAGGCCTGCACCGAAGATATTACGGAATCATCTCAACACTACTCTCCAGGGCTGCAGAGAACTGCCAGCTATGCTTCCGAAGATGACGTGGACAAGCGGGCGGATATGTTTATAGCTAATTTCTACCGGCAGCTTCAGATCGAGCGCCAGGTGTCGCTGGAGCTTCAGTACTGCCGTGGGAATAGCTTCAACAACCACCTCCTAATTTCTCCT ATGGCGGGGAGTAGCTTGCTGGGAAGGCTGCGGAAGGCGGTGAAGAAGGTGAGATTTATGATAAACTTCAGCATCCAAAGCTGGCGGTTGGCGGCCATGATGGGGCGGACTTCGTCGAGAAATCTACGGCTGAGCTTCAACGAACGGCCAGGATTGAAGGCCTGCACCGAAGATATTACGGAATCATCTCAACACTACTCTCCAGGGCTGCAGAGAACTGCCAGCTATGCTTCCGAAGATGACGTGGACAAGCGGGCGGATATGTTTATAGCTAATTTCTACCGGCAGCTTCAGATCGAGCGCCAGGTGTCGCTGGAGCTTCAGTACTGCCGTGGGAATAGCTTCAACAACCACCTCCTAATTTCTCCT ATGGCGGGGAGTAGCTTGCTGGGAAGGCTGCGGAAGGCGGTGAAGAAGGTGAGATTTATGATAAACTTCAGCATCCAAAGCTGGCGGTTGGCGGCCATGATGGGGCGGACTTCGTCGAGAAATCTACGGCTGAGCTTCAACGAACGGCCAGGATTGAAGGCCTGCACCGAAGATATTACGGAATCATCTCAACACTACTCTCCAGGGCTGCAGAGAACTGCCAGCTATGCTTCCGAAGATGACGTGGACAAGCGGGCGGATATGTTTATAGCTAATTTCTACCGGCAGCTTCAGATCGAGCGCCAGGTGTCGCTGGAGCTTCAGTACTGCCGTGGGAATAGCTTCAACAACCACCTCCTAATTTCTCCT MAGSSLLGRLRKAVKKVRFMINFSIQSWRLAAMMGRTSSRNLRLSFNERPGLKACTEDITESSQHYSPGLQRTASYASEDDVDKRADMFIANFYRQLQIERQVSLELQYCRGNSFNNHLLISP Homology
BLAST of MS002250 vs. NCBI nr
Match: XP_022135293.1 (uncharacterized protein LOC111007290 [Momordica charantia]) HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS002250 vs. NCBI nr
Match: XP_038879799.1 (uncharacterized protein LOC120071543 [Benincasa hispida]) HSP 1 Score: 191.8 bits (486), Expect = 3.5e-45 Identity = 102/124 (82.26%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of MS002250 vs. NCBI nr
Match: XP_023515447.1 (uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 1.5e-43 Identity = 97/126 (76.98%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of MS002250 vs. NCBI nr
Match: XP_022987374.1 (uncharacterized protein LOC111484948 [Cucurbita maxima]) HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42 Identity = 95/127 (74.80%), Postives = 109/127 (85.83%), Query Frame = 0
BLAST of MS002250 vs. NCBI nr
Match: XP_022921804.1 (uncharacterized protein LOC111429947 [Cucurbita moschata]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 93/127 (73.23%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of MS002250 vs. ExPASy TrEMBL
Match: A0A6J1C4F5 (uncharacterized protein LOC111007290 OS=Momordica charantia OX=3673 GN=LOC111007290 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.3e-61 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of MS002250 vs. ExPASy TrEMBL
Match: A0A6J1JIQ4 (uncharacterized protein LOC111484948 OS=Cucurbita maxima OX=3661 GN=LOC111484948 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.8e-43 Identity = 95/127 (74.80%), Postives = 109/127 (85.83%), Query Frame = 0
BLAST of MS002250 vs. ExPASy TrEMBL
Match: A0A6J1E1K7 (uncharacterized protein LOC111429947 OS=Cucurbita moschata OX=3662 GN=LOC111429947 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.6e-42 Identity = 93/127 (73.23%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of MS002250 vs. ExPASy TrEMBL
Match: A0A0A0LUK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 8.6e-42 Identity = 94/120 (78.33%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of MS002250 vs. ExPASy TrEMBL
Match: A0A5D3CK96 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00610 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 93/120 (77.50%), Postives = 101/120 (84.17%), Query Frame = 0
BLAST of MS002250 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26 Identity = 68/119 (57.14%), Postives = 90/119 (75.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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