MS002243 (gene) Bitter gourd (TR) v1

Overview


Name	MS002243
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold30: 3575274 .. 3576053 (+)
RNA-Seq Expression	MS002243
Synteny	MS002243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACACCAACGAATCCAATCCTCTGACCTTGAATCACACAGGAGAAGACGAAGAACACGAATCGCTCTCCCTTTCCGATCTTCCACTCGATAACGACAAATCCGACGACCACACTTTCGACGGCTTCCGCAAGAATCCGCGAAGATCCTCATCCGAGCCTCTCGATCTCTTCGAATTCTTCACCACCGGACTCATAAGCTCTGAGATATCTCCGGCCGAGGATTTGATCTTCTGCGGCAGATTGCTTCCTCTCAACGATCAGACTCCGCTTACGCGCGCCACGGAGAAGAATTTCAAAAAGGAAGAGAGCCGAAAGCAGGCTGCCTTTCGAAAACGCTCCGAGTCGTTGTCCGGATTACAGAGCTCTGTTTCTCGATCGAACAGTTCAAAAATCAACCTCAAGCGGAGCAGTAAATCGCTCGATTACCGGAAACTCTACCGCCAAGGTAATCCGATTTTCTCGCCCACGGCGGAAGGCGATCGTAATTATCCGATGAAGAGCGCCGTGAGACCTGATGCGCTGAACAAAAAGGCGTCGTCGAAGCCGCGGTGGTACTTGATGATGTTTGGAATGGTGAAATTTCCGGCGGAGATGGAGCTCAGCGACATTAAGAGCAGACAAGTCCGCCGCAGTTCGTCGGCGCTTTTCCCGGCGCACGAGGATAAAGGTAAGTTTCCGTGCAATCGGAGCTCCGGCGAGGCGGCCTGGAGACTCCTCCGGGCGCTAAGCTGCAAGAACCACTCTAGCGTAGATGTAACGGCGTCGTTAACTGCC

mRNA sequence

ATGGACGACACCAACGAATCCAATCCTCTGACCTTGAATCACACAGGAGAAGACGAAGAACACGAATCGCTCTCCCTTTCCGATCTTCCACTCGATAACGACAAATCCGACGACCACACTTTCGACGGCTTCCGCAAGAATCCGCGAAGATCCTCATCCGAGCCTCTCGATCTCTTCGAATTCTTCACCACCGGACTCATAAGCTCTGAGATATCTCCGGCCGAGGATTTGATCTTCTGCGGCAGATTGCTTCCTCTCAACGATCAGACTCCGCTTACGCGCGCCACGGAGAAGAATTTCAAAAAGGAAGAGAGCCGAAAGCAGGCTGCCTTTCGAAAACGCTCCGAGTCGTTGTCCGGATTACAGAGCTCTGTTTCTCGATCGAACAGTTCAAAAATCAACCTCAAGCGGAGCAGTAAATCGCTCGATTACCGGAAACTCTACCGCCAAGGTAATCCGATTTTCTCGCCCACGGCGGAAGGCGATCGTAATTATCCGATGAAGAGCGCCGTGAGACCTGATGCGCTGAACAAAAAGGCGTCGTCGAAGCCGCGGTGGTACTTGATGATGTTTGGAATGGTGAAATTTCCGGCGGAGATGGAGCTCAGCGACATTAAGAGCAGACAAGTCCGCCGCAGTTCGTCGGCGCTTTTCCCGGCGCACGAGGATAAAGGTAAGTTTCCGTGCAATCGGAGCTCCGGCGAGGCGGCCTGGAGACTCCTCCGGGCGCTAAGCTGCAAGAACCACTCTAGCGTAGATGTAACGGCGTCGTTAACTGCC

Coding sequence (CDS)

ATGGACGACACCAACGAATCCAATCCTCTGACCTTGAATCACACAGGAGAAGACGAAGAACACGAATCGCTCTCCCTTTCCGATCTTCCACTCGATAACGACAAATCCGACGACCACACTTTCGACGGCTTCCGCAAGAATCCGCGAAGATCCTCATCCGAGCCTCTCGATCTCTTCGAATTCTTCACCACCGGACTCATAAGCTCTGAGATATCTCCGGCCGAGGATTTGATCTTCTGCGGCAGATTGCTTCCTCTCAACGATCAGACTCCGCTTACGCGCGCCACGGAGAAGAATTTCAAAAAGGAAGAGAGCCGAAAGCAGGCTGCCTTTCGAAAACGCTCCGAGTCGTTGTCCGGATTACAGAGCTCTGTTTCTCGATCGAACAGTTCAAAAATCAACCTCAAGCGGAGCAGTAAATCGCTCGATTACCGGAAACTCTACCGCCAAGGTAATCCGATTTTCTCGCCCACGGCGGAAGGCGATCGTAATTATCCGATGAAGAGCGCCGTGAGACCTGATGCGCTGAACAAAAAGGCGTCGTCGAAGCCGCGGTGGTACTTGATGATGTTTGGAATGGTGAAATTTCCGGCGGAGATGGAGCTCAGCGACATTAAGAGCAGACAAGTCCGCCGCAGTTCGTCGGCGCTTTTCCCGGCGCACGAGGATAAAGGTAAGTTTCCGTGCAATCGGAGCTCCGGCGAGGCGGCCTGGAGACTCCTCCGGGCGCTAAGCTGCAAGAACCACTCTAGCGTAGATGTAACGGCGTCGTTAACTGCC

Protein sequence

MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKFPCNRSSGEAAWRLLRALSCKNHSSVDVTASLTA

Homology

[Close]

BLAST of MS002243 vs. NCBI nr
Match: XP_022135307.1 (uncharacterized protein LOC111007302, partial [Momordica charantia])

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-116
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFE 60
           MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFE
Sbjct: 5   MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFE 64

Query: 61  FFTTGLISSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSG 120
           FFTTGL SSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSG
Sbjct: 65  FFTTGLRSSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSG 124

Query: 121 LQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKA 180
           LQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKA
Sbjct: 125 LQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKA 184

Query: 181 SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDK 225
           SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDK
Sbjct: 185 SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDK 228

[Close]

BLAST of MS002243 vs. NCBI nr
Match: XP_038879756.1 (uncharacterized protein LOC120071507 [Benincasa hispida] >XP_038879758.1 uncharacterized protein LOC120071507 [Benincasa hispida])

HSP 1 Score: 375.9 bits (964), Expect = 2.7e-100
Identity = 204/265 (76.98%), Postives = 227/265 (85.66%), Query Frame = 0


Query: 1   MDDTNESNPLTLNH--TGEDEEHESLSLSDLPLDNDKSDDHTF-DGFRKNPRRSSSEPLD 60
           MDD+ ESNPL   H    +DE  ESLS SDLPLD +KSD HT  +  RKNPRRSSSEPLD
Sbjct: 3   MDDSTESNPLNSLHDQDADDESEESLSFSDLPLDREKSDGHTHPESLRKNPRRSSSEPLD 62

Query: 61  LFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPL-TRATEKNFKKEE-SRKQAAFRKRS 120
           LFEFF+ G I+SEISPAEDLIFCGRLLPLND +PL TR  EK+F KEE +RKQ  FRKRS
Sbjct: 63  LFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSPLTTRTAEKSFWKEEINRKQTVFRKRS 122

Query: 121 ESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDA 180
           ESLSGLQSSVSRSNS+K NLKR+S+SLDYRKLYRQ N IFSPTAE DRN  + + ++PD+
Sbjct: 123 ESLSGLQSSVSRSNSAKFNLKRNSRSLDYRKLYRQKNSIFSPTAEIDRNCTINTGLKPDS 182

Query: 181 LNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKFPCNRSSGE 240
           LNKKASSKPRWYL+MFGMVKFPAEM+L DIKSRQVRRSSS LFPA+E+KGKF CNRSSGE
Sbjct: 183 LNKKASSKPRWYLLMFGMVKFPAEMDLRDIKSRQVRRSSSVLFPANENKGKFHCNRSSGE 242

Query: 241 AAWRLLRALSCKNHSSVDVTASLTA 261
           AAWR+LRALSCKNH+SVDVTASLTA
Sbjct: 243 AAWRILRALSCKNHASVDVTASLTA 267

[Close]

BLAST of MS002243 vs. NCBI nr
Match: KAG6589708.1 (hypothetical protein SDJN03_15131, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 204/274 (74.45%), Postives = 228/274 (83.21%), Query Frame = 0


Query: 1   MDDTNESNPLTLNH---------TGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRS 60
           MDDT+ES PLT  H           E+E  E+LS SDLPLD  KSD HT + FRKNPRRS
Sbjct: 1   MDDTSESKPLTSQHRQDHHYDEDEDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPRRS 60

Query: 61  SSEPLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLT----RATEKNFKKEESRK 120
           SSEPLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND + LT    R  EK+F K+ESRK
Sbjct: 61  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDESRK 120

Query: 121 QAAFRKRSESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPM 180
           Q  FRKRSESLSGLQSSVSRSN++KINLKR+S+SLDYRKLYRQ N IFSPTAE DRN  +
Sbjct: 121 QTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSI 180

Query: 181 KSAVRPDALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKF 240
           K+ ++PD LNKKASSKPRWYL+MFGMVKFPAEM+LSDIKSRQVRRSSSALFPA+E KGK+
Sbjct: 181 KAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKGKY 240

Query: 241 PC-NRSSGEAAWRLLRALSCKNHSSVDVTASLTA 261
            C NRSSGEA WR+LRALSCKN++SVDVTASLTA
Sbjct: 241 HCNNRSSGEATWRILRALSCKNYASVDVTASLTA 274

[Close]

BLAST of MS002243 vs. NCBI nr
Match: XP_022921809.1 (uncharacterized protein LOC111429953 [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 204/274 (74.45%), Postives = 228/274 (83.21%), Query Frame = 0


Query: 1   MDDTNESNPLTLNHT---------GEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRS 60
           MDDT+ES PLT  H           E+E  E+LS SDLPLD  KSD HT + FRKNPRRS
Sbjct: 3   MDDTSESKPLTSQHRQDHHYDEDGDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPRRS 62

Query: 61  SSEPLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLT----RATEKNFKKEESRK 120
           SSEPLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND + LT    R  EK+F K+ESRK
Sbjct: 63  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDESRK 122

Query: 121 QAAFRKRSESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPM 180
           Q  FRKRSESLSGLQSSVSRSN++KINLKR+S+SLDYRKLYRQ N IFSPTAE DRN  +
Sbjct: 123 QTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSI 182

Query: 181 KSAVRPDALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKF 240
           K+ ++PD LNKKASSKPRWYL+MFGMVKFPAEM+LSDIKSRQVRRSSSALFPA+E KGK+
Sbjct: 183 KAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKGKY 242

Query: 241 PC-NRSSGEAAWRLLRALSCKNHSSVDVTASLTA 261
            C NRSSGEA WR+LRALSCKN++SVDVTASLTA
Sbjct: 243 HCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of MS002243 vs. NCBI nr
Match: KAG7023388.1 (hypothetical protein SDJN02_14413 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99
Identity = 204/274 (74.45%), Postives = 228/274 (83.21%), Query Frame = 0


Query: 1   MDDTNESNPLTLNH---------TGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRS 60
           MDDT+ES PLT  H           E+E  E+LS SDLPLD  KSD HT + FRKNPRRS
Sbjct: 3   MDDTSESKPLTSQHRQDHHYDEDEDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPRRS 62

Query: 61  SSEPLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLT----RATEKNFKKEESRK 120
           SSEPLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND + LT    R  EK+F K+ESRK
Sbjct: 63  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDESRK 122

Query: 121 QAAFRKRSESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPM 180
           Q  FRKRSESLSGLQSSVSRSN++KINLKR+S+SLDYRKLYRQ N IFSPTAE DRN  +
Sbjct: 123 QTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSI 182

Query: 181 KSAVRPDALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKF 240
           K+ ++PD LNKKASSKPRWYL+MFGMVKFPAEM+LSDIKSRQVRRSSSALFPA+E KGK+
Sbjct: 183 KAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKGKY 242

Query: 241 PC-NRSSGEAAWRLLRALSCKNHSSVDVTASLTA 261
            C NRSSGEA WR+LRALSCKN++SVDVTASLTA
Sbjct: 243 HCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of MS002243 vs. ExPASy TrEMBL
Match: A0A6J1C2C2 (uncharacterized protein LOC111007302 OS=Momordica charantia OX=3673 GN=LOC111007302 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.7e-117
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFE 60
           MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFE
Sbjct: 5   MDDTNESNPLTLNHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSEPLDLFE 64

Query: 61  FFTTGLISSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSG 120
           FFTTGL SSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSG
Sbjct: 65  FFTTGLRSSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKRSESLSG 124

Query: 121 LQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKA 180
           LQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKA
Sbjct: 125 LQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPDALNKKA 184

Query: 181 SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDK 225
           SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDK
Sbjct: 185 SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDK 228

[Close]

BLAST of MS002243 vs. ExPASy TrEMBL
Match: A0A6J1E1L2 (uncharacterized protein LOC111429953 OS=Cucurbita moschata OX=3662 GN=LOC111429953 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.6e-100
Identity = 204/274 (74.45%), Postives = 228/274 (83.21%), Query Frame = 0


Query: 1   MDDTNESNPLTLNHT---------GEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRS 60
           MDDT+ES PLT  H           E+E  E+LS SDLPLD  KSD HT + FRKNPRRS
Sbjct: 3   MDDTSESKPLTSQHRQDHHYDEDGDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPRRS 62

Query: 61  SSEPLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLT----RATEKNFKKEESRK 120
           SSEPLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND + LT    R  EK+F K+ESRK
Sbjct: 63  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDESRK 122

Query: 121 QAAFRKRSESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPM 180
           Q  FRKRSESLSGLQSSVSRSN++KINLKR+S+SLDYRKLYRQ N IFSPTAE DRN  +
Sbjct: 123 QTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSI 182

Query: 181 KSAVRPDALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKF 240
           K+ ++PD LNKKASSKPRWYL+MFGMVKFPAEM+LSDIKSRQVRRSSSALFPA+E KGK+
Sbjct: 183 KAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKGKY 242

Query: 241 PC-NRSSGEAAWRLLRALSCKNHSSVDVTASLTA 261
            C NRSSGEA WR+LRALSCKN++SVDVTASLTA
Sbjct: 243 HCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of MS002243 vs. ExPASy TrEMBL
Match: A0A6J1JAL3 (uncharacterized protein LOC111485063 OS=Cucurbita maxima OX=3661 GN=LOC111485063 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.3e-99
Identity = 203/274 (74.09%), Postives = 227/274 (82.85%), Query Frame = 0


Query: 1   MDDTNESNPLTLNHT---------GEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRS 60
           MDDT+ES PLT  H           E+E  E+LS SDLPLD  KSD HT + FRKNPRRS
Sbjct: 3   MDDTSESKPLTSQHRQDHHHDEDGHENEAEEALSFSDLPLDKQKSDGHTPESFRKNPRRS 62

Query: 61  SSEPLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLT----RATEKNFKKEESRK 120
           SSEPLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND + LT    R  +K+F K+ESRK
Sbjct: 63  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDLSQLTTSTNRTADKSFWKDESRK 122

Query: 121 QAAFRKRSESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPM 180
           Q  FRKRSESLSGLQSSVSRSN++KINLKR+S+SLDYRKLYRQ N IFSPTAE DRN  +
Sbjct: 123 QTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQANSIFSPTAEIDRNCSI 182

Query: 181 KSAVRPDALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKF 240
           K+ ++PD LNKKASSKPRWYL+MFGMVKFPAEM+LSDIKSRQVRRSSSALFPA E KGK+
Sbjct: 183 KAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPASESKGKY 242

Query: 241 PC-NRSSGEAAWRLLRALSCKNHSSVDVTASLTA 261
            C NRSSGEA WR+LRALSCKN++SVDVTASLTA
Sbjct: 243 HCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of MS002243 vs. ExPASy TrEMBL
Match: A0A5A7UVS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006030 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.8e-97
Identity = 197/266 (74.06%), Postives = 221/266 (83.08%), Query Frame = 0


Query: 1   MDDTNESNPLTL---NHTGED--EEHESLSLSDLPLDNDKSDDHTF-DGFRKNPRRSSSE 60
           MDDT+ESNPLT     H  +D  E  ESLS SDLP+D + SD HT  D FRKNPRRSSSE
Sbjct: 1   MDDTSESNPLTSKRNQHEDDDDFESDESLSFSDLPMDRENSDAHTHPDSFRKNPRRSSSE 60

Query: 61  PLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKR 120
           PLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND +    A +  +K+E SRKQ  FRKR
Sbjct: 61  PLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSTRITADKSFWKEEISRKQTVFRKR 120

Query: 121 SESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPD 180
           SESLSGLQSSVSRSNS+K NLKR+S+SLDYR+LYRQ N IFSPTAE DRN  +K+ ++PD
Sbjct: 121 SESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQANSIFSPTAEIDRNCSIKTGLKPD 180

Query: 181 ALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKFPCNRSSG 240
           +LNKK SSKPRWYL+MFGMVKFPAEMELSDIKSRQVRRSSS LFP++E K KF C RSSG
Sbjct: 181 SLNKKTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPSNETKSKFHCGRSSG 240

Query: 241 EAAWRLLRALSCKNHSSVDVTASLTA 261
           EA WR+LRALSCKNH+SVDVTASLTA
Sbjct: 241 EATWRILRALSCKNHASVDVTASLTA 266

[Close]

BLAST of MS002243 vs. ExPASy TrEMBL
Match: A0A1S3BW36 (uncharacterized protein LOC103494265 OS=Cucumis melo OX=3656 GN=LOC103494265 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.8e-97
Identity = 197/266 (74.06%), Postives = 221/266 (83.08%), Query Frame = 0


Query: 1   MDDTNESNPLTL---NHTGED--EEHESLSLSDLPLDNDKSDDHTF-DGFRKNPRRSSSE 60
           MDDT+ESNPLT     H  +D  E  ESLS SDLP+D + SD HT  D FRKNPRRSSSE
Sbjct: 1   MDDTSESNPLTSKRNQHEDDDDFESDESLSFSDLPMDRENSDAHTHPDSFRKNPRRSSSE 60

Query: 61  PLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRKR 120
           PLDLFEFF+ G I+SEISPAEDLIFCGRLLPLND +    A +  +K+E SRKQ  FRKR
Sbjct: 61  PLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSTRITADKSFWKEEISRKQTVFRKR 120

Query: 121 SESLSGLQSSVSRSNSSKINLKRSSKSLDYRKLYRQGNPIFSPTAEGDRNYPMKSAVRPD 180
           SESLSGLQSSVSRSNS+K NLKR+S+SLDYR+LYRQ N IFSPTAE DRN  +K+ ++PD
Sbjct: 121 SESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQANSIFSPTAEIDRNCSIKTGLKPD 180

Query: 181 ALNKKASSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRSSSALFPAHEDKGKFPCNRSSG 240
           +LNKK SSKPRWYL+MFGMVKFPAEMELSDIKSRQVRRSSS LFP++E K KF C RSSG
Sbjct: 181 SLNKKTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPSNETKSKFHCGRSSG 240

Query: 241 EAAWRLLRALSCKNHSSVDVTASLTA 261
           EA WR+LRALSCKNH+SVDVTASLTA
Sbjct: 241 EATWRILRALSCKNHASVDVTASLTA 266

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BLAST of MS002243 vs. TAIR 10
Match: AT4G30230.1 (unknown protein; Has 42 Blast hits to 42 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 100/273 (36.63%), Postives = 146/273 (53.48%), Query Frame = 0


Query: 3   DTNESNPLTL----NHTGEDEEHESLSLSDLPLDNDKSDDHTFDGFRKNPRRSSSE---- 62
           +TN  NP  L     H  E+E+ ++LSL DLPL              KNP  +++E    
Sbjct: 6   NTNLQNPTKLPKPFQHHLEEEKEDALSLRDLPLK------------AKNPNPTTTEDHKE 65

Query: 63  -PLDLFEFFTTGLISSEISPAEDLIFCGRLLPLNDQTPLTRATEKNFKKEESRKQAAFRK 122
              +LFEF T+   S +++PAE++IF G+L+PLN Q       E   ++         R 
Sbjct: 66  PSTELFEFLTSS--SYDVAPAENIIFGGKLIPLNYQNAFFSPPEHISRR--------IRS 125

Query: 123 RSESLSGLQS-SVSRSNSSKINLK------RSSKSLDYRKLYRQGNPIFSPTAEGDRNYP 182
           RSESLS +Q   ++R  S  +  +      R+S+SLDYRKL R    + SP    + +  
Sbjct: 126 RSESLSAIQGHKLNRPGSCTVARRDNAGPMRASRSLDYRKLSRGLTTVHSPP---ENSSS 185

Query: 183 MKSAVRPDALNKKA--SSKPRWYLMMFGMVKFPAEMELSDIKSRQVRRS-SSALFPAHED 242
            K+  +P+  +  +  S +PRWY++MFGMVKFP E+EL DIKSRQ+RR+    +FP+  +
Sbjct: 186 TKNTGKPETTSSGSVKSVRPRWYVIMFGMVKFPPEIELKDIKSRQIRRNIPPVMFPSPAN 245

Query: 243 KGKFPCNRSSGEAAWRLLRALSCKNHSSVDVTA 257
           +        S   +WR L ALSCK  +SV  TA
Sbjct: 246 RRARGSRSPSPSPSWRFLNALSCKKPTSVAATA 253

The following BLAST results are available for this feature:

BLAST of MS002243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135307.1	1.6e-116	99.55	uncharacterized protein LOC111007302, partial [Momordica charantia]	[more]
XP_038879756.1	2.7e-100	76.98	uncharacterized protein LOC120071507 [Benincasa hispida] >XP_038879758.1 unchara...	[more]
KAG6589708.1	1.4e-99	74.45	hypothetical protein SDJN03_15131, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022921809.1	1.4e-99	74.45	uncharacterized protein LOC111429953 [Cucurbita moschata]	[more]
KAG7023388.1	1.4e-99	74.45	hypothetical protein SDJN02_14413 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS002243 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2C2	7.7e-117	99.55	uncharacterized protein LOC111007302 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1E1L2	6.6e-100	74.45	uncharacterized protein LOC111429953 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JAL3	3.3e-99	74.09	uncharacterized protein LOC111485063 OS=Cucurbita maxima OX=3661 GN=LOC111485063...	[more]
A0A5A7UVS6	6.8e-97	74.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BW36	6.8e-97	74.06	uncharacterized protein LOC103494265 OS=Cucumis melo OX=3656 GN=LOC103494265 PE=...	[more]

BLAST of MS002243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30230.1	1.6e-29	36.63	unknown protein; Has 42 Blast hits to 42 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..113
None	No IPR available	PANTHER	PTHR34130	FAMILY NOT NAMED	coord: 1..258
None	No IPR available	PANTHER	PTHR34130:SF3	OS08G0243800 PROTEIN	coord: 1..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002243.1	MS002243.1	mRNA