MS002223 (gene) Bitter gourd (TR) v1

Overview


Name	MS002223
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Location	scaffold30: 3341562 .. 3344407 (+)
RNA-Seq Expression	MS002223
Synteny	MS002223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTCGACTTCAGGTTCCAAAATTTTCCGGTTTCCCCACTTTTCCAAATGGTGATGTGCAAATGATTCCAATAATGTATCCCGCTCTAGTTCCTGGATCAGCTCTTGCAGAAAATCAAAATCATGGAGCTGGTATTTATGCAGTTCCTACTTTTCCATCAGTAGGGGGCCCCATTATTGGAATGTCAACTGGCAATCTTATTCCTTTGACTTACAGCACACCCACGTCAGTATCTCTATCATTATTCTATAAAATGATTTAAAATAGTTTATGGAAGGACATTTTGATATTTCATTATGGCTTTGATAGAGCAGAAAAAATTGGCATTGATTTTTGTATTGATTCGATGAATTAGTTACAAGCGACCTATACATTCAAGAGGTTTGTTAATCTCCCTTACTACTCTCTCTAGCTTTACTTCTAAGTAGACGGCAGCATTCTAGTTTAAGTGATTACTCTGTATTAGGTATAACACCCTTCTCTCTGACAGACTTGAAATTTGTCTCTCTTATAAAATGATTTATTGACCCCCGACTCCTCCTCACATGAGCACATAAAAACTCTAACTAGTTGCATCGTCTACCTTCTACATAAATGAAATAAATCGGGCTTGGCATTGTTCTCATTCATACCTCTTGCCCAAGTATTCACCTTGTCCTCGAAGAGGAAATTGGGAAACTGTTGTGTCAGCAAATGATAAGCCTCCCAAGTAGCCTCTTCTGTCAATTGTAGCTTCCGTTGAATTACCACTTTGCAGTTTCCGAGGTTGGTTTAGATGAGGGTGAGACGTAACAAAAACATTATTGAAGGATCAGATTTAGTTCCATCTTTGGAGTTTGGAGGGTAACGAGAGGGCTGAGGTGTACTTCCTTGAGCCAATTTTAGTTGTGAGAAGATTGGGTGAATGGCAGCATCTTGGGGAAGTTGTTAGGAGAGCTTCTCGTTGCACTTTGTCCATCTTCTGTGGGGGGTTGTATTATCCCCATCAGGCTGTTGTCTACAAAAATTAATAGACTTGCCAGAAAAGAGGAAAAAGTTTGTAGTTCCATAACTTCTGCTGTACAAACGGGCTTCAAGAGTAATTTCTGTGCTGGCTAGATATGGTAATACGTATTTTTCCATATATTTCGAGATTTGTGTGTTTTTGAATTATATGTCATCAGAATGGTCCTCTAGCCTAAAACATAGAAAAACGTAGAATCGGTGAGAAATGGGAAATATAGACGAGAAAAACTTATGAATGGATTTGTTTTTATATTCTTATGGTTAACAACAATGAAGCGGGTGGGTCCTTATTTAGAAGTTTTAACTTTCTGATATTTGAGATCTCTCTACATCTTTTATTCCATGTTGACATACTTGACTTAATCCCTGACAGTGGGCATTAATTCGAAAAGCTTCTGCTCCCAGTTTGAGAAAATGATCGATTTCCAAAATAATGTTTGATTATGTTTTTCATGTAAATTTCATGTGTTCTGTACAAGCTACTTTTATGATGCTCGAGTCAACAATTTTTAATGGAAACATTTTTCCAAGTTTTGATATAATGCCCAGCAACGACACATCATGTATCATTTTGAATGTCAACCTCCCATCTCCTCACTTCAACAAAATGCATGACAAGTTTAACCTTTTCGTCAAATTTCATTTGTAATTTTCAATTAGCTGATTTTCGATGTGCTGATTTATTTACTTGGAACCGGAGATTTTGTCCAAGTGTGTTGAGATATCTTTTATTTTTAATTCTAGTAGATCTGATTCCAGCAATAGAACAAGTCCTGAGGGTGGGGCAGCTGAGGAGAGCAGGCAGGTAGAAGGACAACAGCCGCAGCAACAGCAGCAACCTGCACCTCAAAGACAAGTCGTTGTTAGAAGGTTTCAAATTGCCATACAGATTGATTTGTTGCTCATATTGAAGCTCGCTGCTGTAATTTTTCTTGTTCACCAAGATGGTTCGAGACAAAGGCTTATTGTTCTGGTGATTTGTGCTTCACTGGTCTATCTGTAAGCATTCTTAATCTGTAACTATTGCTAGTTGAAACTCTATTTGCACGTATCTGATTATGGATGTAACTATTACTAGTCTATCTGTAAGTATTAGATTGAACTTCTGATAAACATAATGTTAAATGGCCAACCTTTTGCTTTTACCCTTTAATAGGTTACCATATTACTTAATGGAAGTGTTTGACGAATATGGTTACAAATGTTATATGCTCCTCCCAAGTCTCAATTGACCTTTACTGTCTCTACATTAGTGAAGTTGTATCGAGCTGACCCACTCTTGGATATGTCACAGATATCAAACTGGAGCATTGACACCATTGATACGATGGCTTTCACAGGGTATGCAAAGGGCAGCTGCACCTCCCCCGAGGCCAGCAGTTAGGGCAGAGAATGCCCCAGTAGCTCCTCCAGCTGCAAGGCAAGAGGCTCCGAATGTTGCTTTTGCAGGTACCATTTTGATTGATTGCATATTTCAAAACTAGCAATTTTGGCTGAGTTCATAATGAGGTCTTAAGCCAAGGAAATAAGCCTCTTATTAAATATTCTATTGCAAGATTTAATTAATCAACGGTTTTATAGATCACAATTGGGTCTTTATTGATCTATAAAGTCGCCAAGTTTTACGAAAATTTCTTTCAAAAAATGGCAGAGGGACAACCGGGAGCAGAGATTGAGAATCAACCTGCAAATGAAGGGAACCGAGCTGTTGAAAATGAGAATGTGGCAGAGCCTGGTGCTGGAAATGGTGGTCTCAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGCTTCATTACTTCCTTGCTTCCAGGCTTCCATAACATGGAC

mRNA sequence

TTATCTCGACTTCAGGTTCCAAAATTTTCCGGTTTCCCCACTTTTCCAAATGGTGATGTGCAAATGATTCCAATAATGTATCCCGCTCTAGTTCCTGGATCAGCTCTTGCAGAAAATCAAAATCATGGAGCTGGTATTTATGCAGTTCCTACTTTTCCATCAGTAGGGGGCCCCATTATTGGAATGTCAACTGGCAATCTTATTCCTTTGACTTACAGCACACCCACTAGATCTGATTCCAGCAATAGAACAAGTCCTGAGGGTGGGGCAGCTGAGGAGAGCAGGCAGGTAGAAGGACAACAGCCGCAGCAACAGCAGCAACCTGCACCTCAAAGACAAGTCGTTGTTAGAAGGTTTCAAATTGCCATACAGATTGATTTGTTGCTCATATTGAAGCTCGCTGCTGTAATTTTTCTTGTTCACCAAGATGGTTCGAGACAAAGGCTTATTGTTCTGGTGATTTGTGCTTCACTGGTCTATCTATATCAAACTGGAGCATTGACACCATTGATACGATGGCTTTCACAGGGTATGCAAAGGGCAGCTGCACCTCCCCCGAGGCCAGCAGTTAGGGCAGAGAATGCCCCAGTAGCTCCTCCAGCTGCAAGGCAAGAGGCTCCGAATGTTGCTTTTGCAGAGGGACAACCGGGAGCAGAGATTGAGAATCAACCTGCAAATGAAGGGAACCGAGCTGTTGAAAATGAGAATGTGGCAGAGCCTGGTGCTGGAAATGGTGGTCTCAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGCTTCATTACTTCCTTGCTTCCAGGCTTCCATAACATGGAC

Coding sequence (CDS)

TTATCTCGACTTCAGGTTCCAAAATTTTCCGGTTTCCCCACTTTTCCAAATGGTGATGTGCAAATGATTCCAATAATGTATCCCGCTCTAGTTCCTGGATCAGCTCTTGCAGAAAATCAAAATCATGGAGCTGGTATTTATGCAGTTCCTACTTTTCCATCAGTAGGGGGCCCCATTATTGGAATGTCAACTGGCAATCTTATTCCTTTGACTTACAGCACACCCACTAGATCTGATTCCAGCAATAGAACAAGTCCTGAGGGTGGGGCAGCTGAGGAGAGCAGGCAGGTAGAAGGACAACAGCCGCAGCAACAGCAGCAACCTGCACCTCAAAGACAAGTCGTTGTTAGAAGGTTTCAAATTGCCATACAGATTGATTTGTTGCTCATATTGAAGCTCGCTGCTGTAATTTTTCTTGTTCACCAAGATGGTTCGAGACAAAGGCTTATTGTTCTGGTGATTTGTGCTTCACTGGTCTATCTATATCAAACTGGAGCATTGACACCATTGATACGATGGCTTTCACAGGGTATGCAAAGGGCAGCTGCACCTCCCCCGAGGCCAGCAGTTAGGGCAGAGAATGCCCCAGTAGCTCCTCCAGCTGCAAGGCAAGAGGCTCCGAATGTTGCTTTTGCAGAGGGACAACCGGGAGCAGAGATTGAGAATCAACCTGCAAATGAAGGGAACCGAGCTGTTGAAAATGAGAATGTGGCAGAGCCTGGTGCTGGAAATGGTGGTCTCAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGCTTCATTACTTCCTTGCTTCCAGGCTTCCATAACATGGAC

Protein sequence

LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD

Homology

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BLAST of MS002223 vs. NCBI nr
Match: XP_022135109.1 (uncharacterized protein LOC111007171 isoform X1 [Momordica charantia])

HSP 1 Score: 521.5 bits (1342), Expect = 4.3e-144
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 60
           L + QVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII
Sbjct: 25  LKQTQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 84

Query: 61  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 120
           GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ
Sbjct: 85  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 144

Query: 121 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 180
           IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR
Sbjct: 145 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 204

Query: 181 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 240
           AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP
Sbjct: 205 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 264

Query: 241 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD
Sbjct: 265 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 299

[Close]

BLAST of MS002223 vs. NCBI nr
Match: XP_022135112.1 (uncharacterized protein LOC111007171 isoform X3 [Momordica charantia])

HSP 1 Score: 517.3 bits (1331), Expect = 8.0e-143
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 6   VPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTG 65
           VPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTG
Sbjct: 3   VPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTG 62

Query: 66  NLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQI 125
           NLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQI
Sbjct: 63  NLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQI 122

Query: 126 DLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPP 185
           DLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPP
Sbjct: 123 DLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPP 182

Query: 186 PRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNG 245
           PRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNG
Sbjct: 183 PRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNG 242

Query: 246 GLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GLNWWGVVKEIQMIVFGFITSLLPGFHNMD
Sbjct: 243 GLNWWGVVKEIQMIVFGFITSLLPGFHNMD 272

[Close]

BLAST of MS002223 vs. NCBI nr
Match: XP_022135111.1 (uncharacterized protein LOC111007171 isoform X2 [Momordica charantia])

HSP 1 Score: 515.0 bits (1325), Expect = 4.0e-142
Identity = 271/275 (98.55%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 60
           L + QVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII
Sbjct: 25  LKQTQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 84

Query: 61  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 120
           GMSTGNLIPLTYSTPT SDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ
Sbjct: 85  GMSTGNLIPLTYSTPT-SDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 144

Query: 121 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 180
           IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR
Sbjct: 145 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 204

Query: 181 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 240
           AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP
Sbjct: 205 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 264

Query: 241 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD
Sbjct: 265 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 298

[Close]

BLAST of MS002223 vs. NCBI nr
Match: XP_022135113.1 (uncharacterized protein LOC111007171 isoform X4 [Momordica charantia])

HSP 1 Score: 481.9 bits (1239), Expect = 3.7e-132
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 22  MIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSS 81
           MIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSS
Sbjct: 1   MIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSS 60

Query: 82  NRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVH 141
           NRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVH
Sbjct: 61  NRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVH 120

Query: 142 QDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPA 201
           QDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPA
Sbjct: 121 QDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPA 180

Query: 202 ARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVF 261
           ARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVF
Sbjct: 181 ARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVF 240

Query: 262 GFITSLLPGFHNMD 276
           GFITSLLPGFHNMD
Sbjct: 241 GFITSLLPGFHNMD 254

[Close]

BLAST of MS002223 vs. NCBI nr
Match: XP_038880730.1 (uncharacterized protein LOC120072333 isoform X1 [Benincasa hispida])

HSP 1 Score: 461.8 bits (1187), Expect = 4.0e-126
Identity = 245/276 (88.77%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 60
           L + QVPK S FPTFPNG+VQMIPIMYPAL PGSA  ENQN GAGIYAVP+FPS+GGPII
Sbjct: 25  LEQTQVPKLSSFPTFPNGNVQMIPIMYPALFPGSAALENQNRGAGIYAVPSFPSMGGPII 84

Query: 61  GMSTGNLIPLTYSTPTRSDSSNRTSPEGG-AAEESRQVEGQQPQQQQQPAPQRQVVVRRF 120
           GM+T NLIPLTYS PTRSD+SNRT+PEGG   EE+ +VEGQQ QQQQQPAPQRQVVVRRF
Sbjct: 85  GMTTNNLIPLTYSIPTRSDTSNRTNPEGGTTVEENGRVEGQQQQQQQQPAPQRQVVVRRF 144

Query: 121 QIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQ 180
           QIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQ
Sbjct: 145 QIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQ 204

Query: 181 RAAAP--PPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENV 240
           RAAAP  PPRP VRAENAPVAPP ARQEA N AFAEGQPGAE+ENQPANEGNRAVENENV
Sbjct: 205 RAAAPPHPPRPGVRAENAPVAPPVARQEAQNAAFAEGQPGAEVENQPANEGNRAVENENV 264

Query: 241 AEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN 274
           AEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN
Sbjct: 265 AEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN 300

[Close]

BLAST of MS002223 vs. ExPASy TrEMBL
Match: A0A6J1C0J0 (uncharacterized protein LOC111007171 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007171 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.1e-144
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 60
           L + QVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII
Sbjct: 25  LKQTQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 84

Query: 61  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 120
           GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ
Sbjct: 85  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 144

Query: 121 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 180
           IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR
Sbjct: 145 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 204

Query: 181 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 240
           AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP
Sbjct: 205 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 264

Query: 241 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD
Sbjct: 265 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 299

[Close]

BLAST of MS002223 vs. ExPASy TrEMBL
Match: A0A6J1C1R2 (uncharacterized protein LOC111007171 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007171 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.9e-143
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 6   VPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTG 65
           VPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTG
Sbjct: 3   VPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTG 62

Query: 66  NLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQI 125
           NLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQI
Sbjct: 63  NLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQI 122

Query: 126 DLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPP 185
           DLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPP
Sbjct: 123 DLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPP 182

Query: 186 PRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNG 245
           PRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNG
Sbjct: 183 PRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNG 242

Query: 246 GLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GLNWWGVVKEIQMIVFGFITSLLPGFHNMD
Sbjct: 243 GLNWWGVVKEIQMIVFGFITSLLPGFHNMD 272

[Close]

BLAST of MS002223 vs. ExPASy TrEMBL
Match: A0A6J1BZQ1 (uncharacterized protein LOC111007171 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007171 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.9e-142
Identity = 271/275 (98.55%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 60
           L + QVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII
Sbjct: 25  LKQTQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 84

Query: 61  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 120
           GMSTGNLIPLTYSTPT SDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ
Sbjct: 85  GMSTGNLIPLTYSTPT-SDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQ 144

Query: 121 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 180
           IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR
Sbjct: 145 IAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQR 204

Query: 181 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 240
           AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP
Sbjct: 205 AAAPPPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEP 264

Query: 241 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD
Sbjct: 265 GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 298

[Close]

BLAST of MS002223 vs. ExPASy TrEMBL
Match: A0A6J1C3W7 (uncharacterized protein LOC111007171 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007171 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.8e-132
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 22  MIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSS 81
           MIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSS
Sbjct: 1   MIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPIIGMSTGNLIPLTYSTPTRSDSS 60

Query: 82  NRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVH 141
           NRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVH
Sbjct: 61  NRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVH 120

Query: 142 QDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPA 201
           QDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPA
Sbjct: 121 QDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPPRPAVRAENAPVAPPA 180

Query: 202 ARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVF 261
           ARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVF
Sbjct: 181 ARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVF 240

Query: 262 GFITSLLPGFHNMD 276
           GFITSLLPGFHNMD
Sbjct: 241 GFITSLLPGFHNMD 254

[Close]

BLAST of MS002223 vs. ExPASy TrEMBL
Match: A0A5D3DXX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002330 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.4e-123
Identity = 242/278 (87.05%), Postives = 254/278 (91.37%), Query Frame = 0


Query: 1   LSRLQVPKFSGFPTFPNGDVQMIPIMYPALVPGSALAENQNHGAGIYAVPTFPSVGGPII 60
           L + QVPK S FPTFPNG+VQMIPIMYPALVPGSA +ENQN GAGIYAVP+FPS+GGPII
Sbjct: 25  LEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSASSENQNRGAGIYAVPSFPSMGGPII 84

Query: 61  GMSTGNLIPLTYSTPTRSDSSNRTSPEGGAA-EESRQVEGQQPQQQQQPAPQRQVVVRRF 120
           GM+T NLIPLTYS PTRSD+SNRTSPEGG+A EE+ +VEGQQ  QQQQPAPQRQVVVRRF
Sbjct: 85  GMTTNNLIPLTYSIPTRSDTSNRTSPEGGSAVEENGRVEGQQQPQQQQPAPQRQVVVRRF 144

Query: 121 QIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQ 180
           QIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQ
Sbjct: 145 QIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQ 204

Query: 181 RAAAP--PPRPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENV 240
           RAAAP  PPRP VRAENAP+APPAARQE  N AFAEGQPGAE+ENQPANE NR  ENENV
Sbjct: 205 RAAAPPHPPRPGVRAENAPIAPPAARQEGQNAAFAEGQPGAEVENQPANEANRGAENENV 264

Query: 241 AE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN 274
           AE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN
Sbjct: 265 AEAGAGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN 302

[Close]

BLAST of MS002223 vs. TAIR 10
Match: AT4G29960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 242.3 bits (617), Expect = 4.7e-64
Identity = 154/273 (56.41%), Postives = 174/273 (63.74%), Query Frame = 0


Query: 10  SGFPTFPNGDVQMIPIMYPALVPGS---ALAENQNHGAGIYAVPTFPSVGGPIIGMSTGN 69
           SGF  +PNGD  M P+ YP LVPGS      E  N GAGIYAVP     GG + G+ +  
Sbjct: 36  SGFRAYPNGDSPMYPVFYPGLVPGSNPVQYEEQMNRGAGIYAVPVH-QFGGHVAGLPSNY 95

Query: 70  LIPLTYSTPTRSDSSNRTSPEGGAAEESRQVEGQQPQQQQQPAPQRQVVVRRFQIAIQID 129
           LIPLTY+ PT     N  +  GG      Q +  Q QQQQ PA QR VV RRFQIA Q+D
Sbjct: 96  LIPLTYNVPT--TRPNNEAETGG----ENQAQAGQGQQQQLPANQRHVVERRFQIAFQLD 155

Query: 130 LLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPP 189
           L LILKLAAVIFL +QDGSRQRL VLVI A+++YLYQTGAL P +RWLSQGM RAA PP 
Sbjct: 156 LFLILKLAAVIFLFNQDGSRQRLAVLVIFATIIYLYQTGALAPFVRWLSQGMHRAAVPPA 215

Query: 190 ---RPAVRAENAPVAPPAARQEAPNVAFAEGQPGAEIENQPANEGNRAVENENVAE-PGA 249
              RPAVRA+N P A     + A            E E   A+ GNRA  N N  E   A
Sbjct: 216 RPHRPAVRADNDPAAAVPLNENAV----------LEGEENEADNGNRARANANENENVDA 275

Query: 250 GNGGLNWWGVVKEIQMIVFGFITSLLPGFHNMD 276
           GN G  WWG+VKEIQMIVFGFITSLLPGFHN++
Sbjct: 276 GNQGNQWWGIVKEIQMIVFGFITSLLPGFHNIE 291

The following BLAST results are available for this feature:

BLAST of MS002223 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135109.1	4.3e-144	98.91	uncharacterized protein LOC111007171 isoform X1 [Momordica charantia]	[more]
XP_022135112.1	8.0e-143	100.00	uncharacterized protein LOC111007171 isoform X3 [Momordica charantia]	[more]
XP_022135111.1	4.0e-142	98.55	uncharacterized protein LOC111007171 isoform X2 [Momordica charantia]	[more]
XP_022135113.1	3.7e-132	100.00	uncharacterized protein LOC111007171 isoform X4 [Momordica charantia]	[more]
XP_038880730.1	4.0e-126	88.77	uncharacterized protein LOC120072333 isoform X1 [Benincasa hispida]	[more]

BLAST of MS002223 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0J0	2.1e-144	98.91	uncharacterized protein LOC111007171 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C1R2	3.9e-143	100.00	uncharacterized protein LOC111007171 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1BZQ1	1.9e-142	98.55	uncharacterized protein LOC111007171 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C3W7	1.8e-132	100.00	uncharacterized protein LOC111007171 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3DXX7	3.4e-123	87.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS002223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29960.1	4.7e-64	56.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..111
None	No IPR available	PANTHER	PTHR36787	TRANSMEMBRANE PROTEIN	coord: 4..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002223.1	MS002223.1	mRNA