MS002166 (gene) Bitter gourd (TR) v1

Overview


Name	MS002166
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF4228 domain protein
Location	scaffold30: 2905138 .. 2905638 (-)
RNA-Seq Expression	MS002166
Synteny	MS002166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTCAGCGTCTTGTGCTCCTTCCATGGTCTCCAATGGCGCCGCCAAGGTCTTATCCTTGGACGGAAAATTGGAGAGCTACACGAAGCCAGTGAAAGCTGCGGAATTAATGATAGAGAATTCCGGCAAATTCCTCTGCGATTCCGGCGATCTCAAAGTCGGCCACCGGATTCAAGGCCTTCTGCCTGACGAAGATCTCGAGTGCCGCCGATTGTACTTTCTCCTCCCGATGGATCTGCTCTACTCCGTGCTAACGCTCGAGGAAATGAGTTCTCTCACTTACATCGCCACAAAAGCCCTAAAACAGGGGAATTCGAGTGGATTTGGGAGGATCTTCCCTGTTTTGATCAGCGAATTGTGCATTCTTCCGTCGGAAGTGAATCGGTTGAAATCGGAGCACGGCGATCGAGAGAGCGAAAATTCGACGAAGAAGCCGGTGCAGAGATTGATGTCAAAGCAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCAGAA

mRNA sequence

ATGGGGAACTCAGCGTCTTGTGCTCCTTCCATGGTCTCCAATGGCGCCGCCAAGGTCTTATCCTTGGACGGAAAATTGGAGAGCTACACGAAGCCAGTGAAAGCTGCGGAATTAATGATAGAGAATTCCGGCAAATTCCTCTGCGATTCCGGCGATCTCAAAGTCGGCCACCGGATTCAAGGCCTTCTGCCTGACGAAGATCTCGAGTGCCGCCGATTGTACTTTCTCCTCCCGATGGATCTGCTCTACTCCGTGCTAACGCTCGAGGAAATGAGTTCTCTCACTTACATCGCCACAAAAGCCCTAAAACAGGGGAATTCGAGTGGATTTGGGAGGATCTTCCCTGTTTTGATCAGCGAATTGTGCATTCTTCCGTCGGAAGTGAATCGGTTGAAATCGGAGCACGGCGATCGAGAGAGCGAAAATTCGACGAAGAAGCCGGTGCAGAGATTGATGTCAAAGCAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCAGAA

Coding sequence (CDS)

ATGGGGAACTCAGCGTCTTGTGCTCCTTCCATGGTCTCCAATGGCGCCGCCAAGGTCTTATCCTTGGACGGAAAATTGGAGAGCTACACGAAGCCAGTGAAAGCTGCGGAATTAATGATAGAGAATTCCGGCAAATTCCTCTGCGATTCCGGCGATCTCAAAGTCGGCCACCGGATTCAAGGCCTTCTGCCTGACGAAGATCTCGAGTGCCGCCGATTGTACTTTCTCCTCCCGATGGATCTGCTCTACTCCGTGCTAACGCTCGAGGAAATGAGTTCTCTCACTTACATCGCCACAAAAGCCCTAAAACAGGGGAATTCGAGTGGATTTGGGAGGATCTTCCCTGTTTTGATCAGCGAATTGTGCATTCTTCCGTCGGAAGTGAATCGGTTGAAATCGGAGCACGGCGATCGAGAGAGCGAAAATTCGACGAAGAAGCCGGTGCAGAGATTGATGTCAAAGCAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCAGAA

Protein sequence

MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQGLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISELCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE

Homology

[Close]

BLAST of MS002166 vs. NCBI nr
Match: XP_022135244.1 (uncharacterized protein LOC111007254 [Momordica charantia])

HSP 1 Score: 323.9 bits (829), Expect = 7.9e-85
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ
Sbjct: 24  MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 83

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE
Sbjct: 84  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 143

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCILPSEVNRLKSEH DRE+ENSTKKPVQRLMSKQRSWKPALETIAE
Sbjct: 144 LCILPSEVNRLKSEHSDRETENSTKKPVQRLMSKQRSWKPALETIAE 190

[Close]

BLAST of MS002166 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 2.2e-71
Identity = 144/167 (86.23%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASCAPSM SNGAAKVLSLDGKL+SY KPV+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLT+EEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI  S+VNRLKS  GDR  EN + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCISLSDVNRLKSADGDR--ENRSSKPVQRLMSKQRSWKPALETIAE 165

[Close]

BLAST of MS002166 vs. NCBI nr
Match: XP_022987495.1 (uncharacterized protein LOC111485040 [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 2.9e-71
Identity = 145/167 (86.83%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASCAPSM SNGAAKVLSLDGKL+SYTK V+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYTKRVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI  S+VNRLKS  GDR  EN + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCISLSDVNRLKSADGDR--ENRSSKPVQRLMSKQRSWKPALETIAE 165

[Close]

BLAST of MS002166 vs. NCBI nr
Match: KAG7023330.1 (hypothetical protein SDJN02_14355, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-71
Identity = 144/167 (86.23%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASC PSM SNGAAKVLSLDGKL+SY KPV+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI  S+VNRLKS  GDR  EN + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCISLSDVNRLKSADGDR--ENRSSKPVQRLMSKQRSWKPALETIAE 165

[Close]

BLAST of MS002166 vs. NCBI nr
Match: XP_038879989.1 (uncharacterized protein LOC120071684 [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-70
Identity = 142/167 (85.03%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNS SCAPSM SNGAAKVLSLDGKL+S+TKPVKAAELMIE+SGKFLCDS DLK+GHRIQ
Sbjct: 1   MGNSVSCAPSMASNGAAKVLSLDGKLQSFTKPVKAAELMIEHSGKFLCDSSDLKIGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLE RRLYFLLPMDLLYSVLTLEEMSSL++IATKALK GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLSFIATKALKHGNSSGFGRIFPVLISE 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI P++V++LK E GDRE+++S  K V+RLMSKQRSWKPALETIAE
Sbjct: 121 LCISPADVDQLKLEDGDRENQSS--KAVKRLMSKQRSWKPALETIAE 165

[Close]

BLAST of MS002166 vs. ExPASy TrEMBL
Match: A0A6J1C0W6 (uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007254 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.8e-85
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ
Sbjct: 24  MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 83

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE
Sbjct: 84  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 143

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCILPSEVNRLKSEH DRE+ENSTKKPVQRLMSKQRSWKPALETIAE
Sbjct: 144 LCILPSEVNRLKSEHSDRETENSTKKPVQRLMSKQRSWKPALETIAE 190

[Close]

BLAST of MS002166 vs. ExPASy TrEMBL
Match: A0A6J1E2A0 (uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC111429917 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 144/167 (86.23%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASCAPSM SNGAAKVLSLDGKL+SY KPV+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLT+EEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI  S+VNRLKS  GDR  EN + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCISLSDVNRLKSADGDR--ENRSSKPVQRLMSKQRSWKPALETIAE 165

[Close]

BLAST of MS002166 vs. ExPASy TrEMBL
Match: A0A6J1JH13 (uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 145/167 (86.83%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSASCAPSM SNGAAKVLSLDGKL+SYTK V+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYTKRVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI  S+VNRLKS  GDR  EN + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCISLSDVNRLKSADGDR--ENRSSKPVQRLMSKQRSWKPALETIAE 165

[Close]

BLAST of MS002166 vs. ExPASy TrEMBL
Match: A0A6J1HLR9 (uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.5e-70
Identity = 142/167 (85.03%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSA CAPSM  NGAAKVL+LDG L+S+TKPVKAAELMIE+SGKFLCDSGDLKVGHRI 
Sbjct: 1   MGNSAFCAPSMAFNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLL +E LECRRLYFLLPMDLLYSVLT+EEMSSLTYIATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLTEEYLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI PS+VN LKS  GD E+ N + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCIFPSDVNGLKSADGDGEN-NQSSKPVQRLMSKQRSWKPALETIAE 166

[Close]

BLAST of MS002166 vs. ExPASy TrEMBL
Match: A0A6J1F5K3 (uncharacterized protein LOC111441040 OS=Cucurbita moschata OX=3662 GN=LOC111441040 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.5e-68
Identity = 139/167 (83.23%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MGNSA CAPSM SNGAAKVL+LDG L+S+ KPVKAAELMIE+SGKFLCDSGDLKVGHRI 
Sbjct: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFMKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLTYIATKA+K+GNSSGFGRIFPVLISE
Sbjct: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKAMKRGNSSGFGRIFPVLISE 120

Query: 121 LCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           LCI PS+VN LKS  GD E+ N + KPVQRLMSKQRSWKPALETIAE
Sbjct: 121 LCIFPSDVNGLKSADGDGEN-NQSSKPVQRLMSKQRSWKPALETIAE 166

[Close]

BLAST of MS002166 vs. TAIR 10
Match: AT1G18290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 3.7e-24
Identity = 70/177 (39.55%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 1   MGNSASCAPSMV----SNGAAKVLS-LDGKLESYTKPVKAAELMIENSGKFLCDSGDLKV 60
           MGN++SCAP ++    S+G  K+L+   G LE ++KP+K ++++  +SG F+ DS  L++
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIQGLLPDEDLECRR-LYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIF 120
            HR+  + PDE L  RR LY LLP D+L+SVLT EE+S ++  A + L +   +   RIF
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 PVLISELC----ILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
           PV I  +       PS VN  ++  G    E   +K +    SK  SW+P LETI E
Sbjct: 121 PVCIFPMTGDRRRNPSSVNEDRAHDGVEIRETLDEKVLYE--SKHGSWRPKLETIVE 175

[Close]

BLAST of MS002166 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 6.8e-10
Identity = 31/106 (29.25%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 5   ASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQGLLP 64
           A  +   + + +AK++ LDG L+ ++ PVK  +++ +N   F+C+S ++     +  +  
Sbjct: 3   ACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAG 62

Query: 65  DEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGF 111
           +E+L   +LYF+LP+  L   L  EEM++L   A+ AL +    G+
Sbjct: 63  NEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGW 108

[Close]

BLAST of MS002166 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.4e-09
Identity = 45/170 (26.47%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 60
           MG  +S   + V+   AK++  DG++  +  PVK   ++++    F+C+S D+     + 
Sbjct: 1   MGICSSSESTQVA--TAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVA 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGR--IFPVLI 120
            +  DE+L+  ++YF LP+  L   L  EEM++L   A+ AL +G   G  R  + P++ 
Sbjct: 61  AISADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRRKCVEPIVS 120

Query: 121 SELCI-LPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
            +L + + S  + + S  G R+  N           +++ +   L TI E
Sbjct: 121 DKLRMRVGSGDDTVGSGSGRRKVRNGDGGGSVSSSRRRKCYAAELSTIDE 168

[Close]

BLAST of MS002166 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 54/170 (31.76%), Postives = 78/170 (45.88%), Query Frame = 0


Query: 1   MGNSASCAPSMVSNG-AAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRI 60
           MGN  SCA +  S+   AKV+  DG +     P KAAELM+E    FL D+  +KVG + 
Sbjct: 1   MGNYVSCALNKTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKF 60

Query: 61  QGLLPDEDLECR--RLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVL 120
             L  D+DL+     +Y   PM    S     +M+ L Y+  K  K+  + G  R+ P  
Sbjct: 61  IPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARL-YLTGK--KRTKNCGHRRVSPEN 120

Query: 121 ISELCILPSEVNRLKSEHGDRESENSTKKPVQRLMSKQRSWKPALETIAE 168
                    +V  +  +    + E  +       +S  +S KP LETIAE
Sbjct: 121 EDN-----DDVRLIGPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETIAE 162

[Close]

BLAST of MS002166 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-09
Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 17  AKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQGLLPDEDLECRRLYFL 76
           AK++  DG L+ ++ PVK  +++ +N   F+C+S D+     +  +   EDL    LYF+
Sbjct: 15  AKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAVPGSEDLRPGELYFV 74

Query: 77  LPMDLLYSVLTLEEMSSLTYIATKALKQGNSSG 110
           LP+  L   L  +EM++L   A+ AL +    G
Sbjct: 75  LPLTWLNHPLRADEMAALAVKASSALAKSGGGG 107

The following BLAST results are available for this feature:

BLAST of MS002166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135244.1	7.9e-85	98.80	uncharacterized protein LOC111007254 [Momordica charantia]	[more]
XP_022921761.1	2.2e-71	86.23	uncharacterized protein LOC111429917 [Cucurbita moschata]	[more]
XP_022987495.1	2.9e-71	86.83	uncharacterized protein LOC111485040 [Cucurbita maxima]	[more]
KAG7023330.1	3.8e-71	86.23	hypothetical protein SDJN02_14355, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038879989.1	1.5e-70	85.03	uncharacterized protein LOC120071684 [Benincasa hispida]	[more]

BLAST of MS002166 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0W6	3.8e-85	98.80	uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1E2A0	1.1e-71	86.23	uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JH13	1.4e-71	86.83	uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040...	[more]
A0A6J1HLR9	3.5e-70	85.03	uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363...	[more]
A0A6J1F5K3	9.5e-68	83.23	uncharacterized protein LOC111441040 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]

BLAST of MS002166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18290.1	3.7e-24	39.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	6.8e-10	29.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	4.4e-09	26.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G03280.1	5.8e-09	31.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G50800.1	7.6e-09	32.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..167 e-value: 1.1E-32 score: 114.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..167
None	No IPR available	PANTHER	PTHR33052:SF19	DUF4228 DOMAIN PROTEIN	coord: 1..167
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002166.1	MS002166.1	mRNA