MS002136 (gene) Bitter gourd (TR) v1

Overview


Name	MS002136
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MRP-S28 domain-containing protein
Location	scaffold30: 2630100 .. 2633274 (+)
RNA-Seq Expression	MS002136
Synteny	MS002136

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGACTCTATTGAGAAACGTCTCTCTCAGAGCTTGCCATCATCTCCTTAATTCTCCTACTTACAGGCCCAATGCCCTTCCTCCATGCTTGCTCTCTGCCCCGGCCAGGTCTCGATTCAGGCTCTTCTCTTCTGAGAACGATTCGCCGCCGAAGGATAGTTCCGAAGGTGCTCCCGAAGCGAATTTGGCGCCGGCTCAGAAGAAAGGCATATCTCTGGACGTCCAAGACGTGAGAAATAAAGGTAGTTTGCCATTGGCAATTGAAGGATTGTGAAGTCGTTATTGATATCTTGTCTCTGTTTTGTACATTTTAGTATTCATATAGTCGGCAGGTTTTCTTTGTTGATGAAAATGAATCTGTGGGACGGGAAATCCTGTAGGTTATATTCGAACATTTGGGAAGTGCTTGAAGTTAGATGATAGTTTTGATGTTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTNTACATTCGAGATTGGGTAACATTTGGGTGTTCTATTTTTTCGTAGCTGATGTCTGTGCTTGTTTTATTTGCTCAAGAAGTAAAGATTTCTGGATCTGACGTTGGTTCCGTGGTAAATTAGGAATTTTTTCAATGTGACTTAATCATAAGTCATGGCAGTTCAAAATAATTACATTTGCCATTTGATCCATAAAATTTCTGCCCCCAGAATTGAAAATGCGGATAGAGAAGTACTTCAAAGGTGATGAGGAGGCACTGCCATCAATTCTTGAAGCTATTCTTCAGAGGAAATTGGCTGGAAAGCACGAGGATACGGATGATGAACTTATTGAAGAACTACGAATGCAACCATTGGATGATGTCAAGGACAAAGAGTTCGAATCTGATTTTGAAGAATTGTACGAGACAGATGAAGAGATTGACGATCTTTACAATGCTAGGGATATAGTTATGAAAAAAATGGTGAAGGACGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGTATTAAGCATGGGATCCTGAAGGACACCAAGGAGTGTGAAGCGATTTTGGAGGATATGCTTAGCTGGGACAAGCTCCTTCCAGGTTTGCCTCTTTTCTTTACATGCTTGTTTTGGTTGGTATCACTCCTTAAAGAAATAAACGTGCAACATTCCATCATCTTTGCATCACTTTTCTTTACGTTCATACTTCTTTTCCATGTGCTTTACTTTTGGAGTAAAAGGCTTTAAATTTTAATTTTGTGGCGTTGTTTACTCTATCCATTTGTTCCTGATGGTTCATATCAACTGATTATAATTGCATCTTATTTATTTTGTACATCAGTACTATGTAGATGTTCTAAGTTATTGTTTTTTCATTGAGGCTAAAGATTCCAAATTGGCTCTGTAACGGTTCAATTATATTTTGCTTTATTGATATCTGGTTCCTTACTCCCCTTGGGTGTTGACACAATGGCAAGAGACTTAGGATGTTAAAATCCACGATCTGAGTTCGAGCCCTTATTTGTCTCTGGTTCATTTCTTTATGCCTCCCCATTCATGCAGTTTCTCGATTTCATCCTACTGCTGAGATTTATGTCCGATGCCATGCTTATATATATGTTTCGTGGCTATTATATTTTCTTTTTCAATCCGTCTCAGGAAAATACTAGTAACCCTTGTATAGTGCCCTCTTTTCCCTCAGAATAAATTGCTAGCCCTCTGAATAGAAAATAATTAGTGGTGAGCCCCGCTTCTTAGTGGAAAATTGTAAAACCCCACCGACTGAAAAATTGTAAGTTCCACTTATCTGAAAACCTATAATATTTCCTTGAAACTTGTACCTCCATTTGAGGCAATAAGCGTATAGCACAACTAACGAGAATAAGACTGGTTTGAGCCGAACTGATTTGTTCAGTTGAAAATTGATTTTCACTGAGCTATTGCTTTAGTCTGGTTGAAATTATTTAGCAATTGAATTTCCATAAATTCAGTATGGTAAAAAACTGATGAAAAAGCTGTTAATTGGCTGGTTGTTGGTTCAAATCCTGCCCAGACTGCTGATGTACGTCCTTAACCCTCCAAGTCTAACTTGTGCAATCACTCAATCATTGTTATCTTGTGTATGTATGCATGGAAATCATTACCATCTCGTATAATACTCTTTCAATAATATTTTTTTTTTTTCCATTTCTCGGTACTTAACCGTTCATCAGATGAAATGAAGAAAAAGGTGGAAGAGAAATTCAATGAGCTGGGGGATATGTGTGAAAAAGGGGAACTTGAACCTGAAGAAGCTTACTCGATGTTCAAAGAGTTTGAAGATCAGATGGTCATGGAATATGGAAAAATGATGGAGGCGGAGGGACCACCAAAGTTTGATGAAACCGATGTGCCAGATAACAAAAAGGACTTGGATGACCCACCAGGGGAAGGGCCAATTCTTAGGTGGCAAACAAGGGTTGTGTTTGCACCAGGTGGGGATGCATGGCATCCCAAAAATCGAAAAGTGAAGTTGTCTGTTACTGTGAAGGAGCTTGGTTTATCGAAGTACCAATTCCGTCGACTGAGGGAATTGGTTGGCAAACGCTATCATCCTGGAAAAGATGAGCTTACGATTACTAGTGAGAGGTAAGGTCAACAGTGGTATGTTGTAATGTTTAATTCTCAATTCTTTGTTGATACTTCTCCTAGGACTAAGATGTTGGAGTTTGACTCGTCTTATTGGACTATAACATGTCTCTGACATAACTAATGAAGAAGCCAATTCTAGACAATAAATTAACAGGATCCATCAACACGTATGTTTTGCTCTGTTTCTTCGTTCCTCTGACTACTTTAAGAATTCATTATGGTTCCTTTCTCTACCAATTTGACTTTAAAATCTTTTTTTGCTCAAGGAATATTTGACCATGAACCCGAACATGTGCAGTCTTTGTTATGTTTTGTTGGGTTTCCTTTTCATTATTCTACATTTGTAAAAGACTATAACATCAATTGTATTTGTCAGGTTTGAACACAGAGAGGAAAATAGAAAGGATTGCCTTAGGACTCTTTATTCTCTGATAGAGGAGGCTGGGAAAGCCAACAAATTTGTGGAGGATGCTCGAGCTTCGTATGTTAAGGAGAGGTTGCGGGCAAATCCTCAGTTCATGGAGAGGCTGCGTGCCAAGAAGATGGGTTCACAAGTATCAAGCCCTTTGCCTGCT

mRNA sequence

ATGAAATGGACTCTATTGAGAAACGTCTCTCTCAGAGCTTGCCATCATCTCCTTAATTCTCCTACTTACAGGCCCAATGCCCTTCCTCCATGCTTGCTCTCTGCCCCGGCCAGGTCTCGATTCAGGCTCTTCTCTTCTGAGAACGATTCGCCGCCGAAGGATAGTTCCGAAGGTGCTCCCGAAGCGAATTTGGCGCCGGCTCAGAAGAAAGGCATATCTCTGGACGTCCAAGACGTGAGAAATAAAGAATTGAAAATGCGGATAGAGAAGTACTTCAAAGGTGATGAGGAGGCACTGCCATCAATTCTTGAAGCTATTCTTCAGAGGAAATTGGCTGGAAAGCACGAGGATACGGATGATGAACTTATTGAAGAACTACGAATGCAACCATTGGATGATGTCAAGGACAAAGAGTTCGAATCTGATTTTGAAGAATTGTACGAGACAGATGAAGAGATTGACGATCTTTACAATGCTAGGGATATAGTTATGAAAAAAATGGTGAAGGACGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGTATTAAGCATGGGATCCTGAAGGACACCAAGGAGTGTGAAGCGATTTTGGAGGATATGCTTAGCTGGGACAAGCTCCTTCCAGATGAAATGAAGAAAAAGGTGGAAGAGAAATTCAATGAGCTGGGGGATATGTGTGAAAAAGGGGAACTTGAACCTGAAGAAGCTTACTCGATGTTCAAAGAGTTTGAAGATCAGATGGTCATGGAATATGGAAAAATGATGGAGGCGGAGGGACCACCAAAGTTTGATGAAACCGATGTGCCAGATAACAAAAAGGACTTGGATGACCCACCAGGGGAAGGGCCAATTCTTAGGTGGCAAACAAGGGTTGTGTTTGCACCAGGTGGGGATGCATGGCATCCCAAAAATCGAAAAGTGAAGTTGTCTGTTACTGTGAAGGAGCTTGGTTTATCGAAGTACCAATTCCGTCGACTGAGGGAATTGGTTGGCAAACGCTATCATCCTGGAAAAGATGAGCTTACGATTACTAGTGAGAGGTTTGAACACAGAGAGGAAAATAGAAAGGATTGCCTTAGGACTCTTTATTCTCTGATAGAGGAGGCTGGGAAAGCCAACAAATTTGTGGAGGATGCTCGAGCTTCGTATGTTAAGGAGAGGTTGCGGGCAAATCCTCAGTTCATGGAGAGGCTGCGTGCCAAGAAGATGGGTTCACAAGTATCAAGCCCTTTGCCTGCT

Coding sequence (CDS)

ATGAAATGGACTCTATTGAGAAACGTCTCTCTCAGAGCTTGCCATCATCTCCTTAATTCTCCTACTTACAGGCCCAATGCCCTTCCTCCATGCTTGCTCTCTGCCCCGGCCAGGTCTCGATTCAGGCTCTTCTCTTCTGAGAACGATTCGCCGCCGAAGGATAGTTCCGAAGGTGCTCCCGAAGCGAATTTGGCGCCGGCTCAGAAGAAAGGCATATCTCTGGACGTCCAAGACGTGAGAAATAAAGAATTGAAAATGCGGATAGAGAAGTACTTCAAAGGTGATGAGGAGGCACTGCCATCAATTCTTGAAGCTATTCTTCAGAGGAAATTGGCTGGAAAGCACGAGGATACGGATGATGAACTTATTGAAGAACTACGAATGCAACCATTGGATGATGTCAAGGACAAAGAGTTCGAATCTGATTTTGAAGAATTGTACGAGACAGATGAAGAGATTGACGATCTTTACAATGCTAGGGATATAGTTATGAAAAAAATGGTGAAGGACGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGTATTAAGCATGGGATCCTGAAGGACACCAAGGAGTGTGAAGCGATTTTGGAGGATATGCTTAGCTGGGACAAGCTCCTTCCAGATGAAATGAAGAAAAAGGTGGAAGAGAAATTCAATGAGCTGGGGGATATGTGTGAAAAAGGGGAACTTGAACCTGAAGAAGCTTACTCGATGTTCAAAGAGTTTGAAGATCAGATGGTCATGGAATATGGAAAAATGATGGAGGCGGAGGGACCACCAAAGTTTGATGAAACCGATGTGCCAGATAACAAAAAGGACTTGGATGACCCACCAGGGGAAGGGCCAATTCTTAGGTGGCAAACAAGGGTTGTGTTTGCACCAGGTGGGGATGCATGGCATCCCAAAAATCGAAAAGTGAAGTTGTCTGTTACTGTGAAGGAGCTTGGTTTATCGAAGTACCAATTCCGTCGACTGAGGGAATTGGTTGGCAAACGCTATCATCCTGGAAAAGATGAGCTTACGATTACTAGTGAGAGGTTTGAACACAGAGAGGAAAATAGAAAGGATTGCCTTAGGACTCTTTATTCTCTGATAGAGGAGGCTGGGAAAGCCAACAAATTTGTGGAGGATGCTCGAGCTTCGTATGTTAAGGAGAGGTTGCGGGCAAATCCTCAGTTCATGGAGAGGCTGCGTGCCAAGAAGATGGGTTCACAAGTATCAAGCCCTTTGCCTGCT

Protein sequence

MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAPEANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDDELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKWDELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPEEAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA

Homology

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BLAST of MS002136 vs. NCBI nr
Match: XP_022135439.1 (uncharacterized protein LOC111007394 [Momordica charantia])

HSP 1 Score: 823.5 bits (2126), Expect = 8.0e-235
Identity = 416/419 (99.28%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP
Sbjct: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           +ANLAPAQKKGISLDVQDV NKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD
Sbjct: 61  KANLAPAQKKGISLDVQDVSNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW
Sbjct: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE
Sbjct: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA 420
           RKDCLRTLYSLIEEAGKANK VEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA
Sbjct: 361 RKDCLRTLYSLIEEAGKANKLVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA 419

[Close]

BLAST of MS002136 vs. NCBI nr
Match: XP_022921942.1 (uncharacterized protein LOC111430048 [Cucurbita moschata])

HSP 1 Score: 752.3 bits (1941), Expect = 2.3e-213
Identity = 382/420 (90.95%), Postives = 397/420 (94.52%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M W+LLRNVSLRA  HLLNSPTYR NA+PP LLSAP+ S+FRLFSSEND PPK+ S    
Sbjct: 1   MNWSLLRNVSLRARSHLLNSPTYRSNAVPPRLLSAPSTSQFRLFSSENDLPPKEDSGSVS 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           EANL P QKK ISLDVQDV NKELKMRI+KYFKGDEEALPSILEAIL+RKL GKHEDTDD
Sbjct: 61  EANLVPTQKKEISLDVQDVSNKELKMRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EEL+MQPLDDVKDKEFESDFEELYETDEEIDDLYN RDIVMKKMVK+EYFNMDDKKW
Sbjct: 121 ELVEELQMQPLDDVKDKEFESDFEELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHGILKDTKECE ILEDMLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPE
Sbjct: 181 DELVEDGIKHGILKDTKECEEILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY++FKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDAR SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of MS002136 vs. NCBI nr
Match: KAG6589616.1 (hypothetical protein SDJN03_15039, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 751.9 bits (1940), Expect = 3.0e-213
Identity = 382/420 (90.95%), Postives = 398/420 (94.76%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M W+LLRNVSLRA  HLLNSPTYR NA+PP LLSAP+ S+FRLFSSEND PPK+ S    
Sbjct: 1   MNWSLLRNVSLRARSHLLNSPTYRSNAVPPRLLSAPSTSQFRLFSSENDLPPKEDSGSVS 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           EANL P QKK ISLDVQDV NKELKMRI+KYFKGDEEALPSILEAIL+RKL GKHEDTDD
Sbjct: 61  EANLVPTQKKEISLDVQDVSNKELKMRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EEL+MQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVK+EYFNMDDKKW
Sbjct: 121 ELVEELQMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKNEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHGILKDTKECE ILEDMLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPE
Sbjct: 181 DELVEDGIKHGILKDTKECEEILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY++FKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGK+ELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKNELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDAR SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of MS002136 vs. NCBI nr
Match: XP_023516875.1 (uncharacterized protein LOC111780645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 750.7 bits (1937), Expect = 6.6e-213
Identity = 381/420 (90.71%), Postives = 398/420 (94.76%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M W+LLRNVSLRA  HLLNSPTYR NA+PP LLSAPA S+FRLFSSEND PPK+ S    
Sbjct: 1   MNWSLLRNVSLRARSHLLNSPTYRSNAVPPRLLSAPATSQFRLFSSENDLPPKEDSGSVS 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           EANL P QKK ISLDVQDV NKELKMRI+KYFKGDEEALPSILEAIL+RKL GKHE+TDD
Sbjct: 61  EANLVPTQKKEISLDVQDVSNKELKMRIDKYFKGDEEALPSILEAILRRKLVGKHEETDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EEL+MQPLDDVKDKEFESDFEELYETDEEIDDLYN RDIVMKKMVK+EYFNMDDKKW
Sbjct: 121 ELVEELQMQPLDDVKDKEFESDFEELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPE
Sbjct: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           +AY++FKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 DAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGK+ELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKNELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDAR SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of MS002136 vs. NCBI nr
Match: XP_022988239.1 (uncharacterized protein LOC111485553 [Cucurbita maxima])

HSP 1 Score: 747.7 bits (1929), Expect = 5.6e-212
Identity = 380/420 (90.48%), Postives = 395/420 (94.05%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M W+LLRNVSLRA  HLLNSPTYR N +PP LLSAPA S+FRLFSSEND PPK+ S    
Sbjct: 1   MNWSLLRNVSLRARSHLLNSPTYRSNVVPPRLLSAPATSQFRLFSSENDLPPKEDSGSVS 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           EANL P QKK I LDVQDV NKELKMRI+KYFKGDEEALPSILEAILQRKL GKHEDTDD
Sbjct: 61  EANLVPTQKKEIPLDVQDVSNKELKMRIDKYFKGDEEALPSILEAILQRKLVGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EEL+MQPLDDVKDKEFESDFEELYETDEEID+LYNARDIVMKKMVK+EYFNMDDKKW
Sbjct: 121 ELVEELQMQPLDDVKDKEFESDFEELYETDEEIDNLYNARDIVMKKMVKNEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHG LKDTKECE ILEDMLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPE
Sbjct: 181 DELVEDGIKHGFLKDTKECEEILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY++FKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGK+ELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKNELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDAR SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of MS002136 vs. ExPASy Swiss-Prot
Match: Q03976 (37S ribosomal protein S24, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RSM24 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.6e-04
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 307 HPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREENRKDCLR 366
           HP +RKV LSV  KELGL +    + R L   RY    D   ++S++FEH  +N +    
Sbjct: 194 HPNSRKVVLSVKTKELGLEEKSLHKFRILARSRYDHTTDIFKMSSDKFEHASQNARYLHD 253

Query: 367 TLYSLIEEA 376
            L  L+ E+
Sbjct: 254 ILQRLLAES 262

[Close]

BLAST of MS002136 vs. ExPASy TrEMBL
Match: A0A6J1C1G2 (uncharacterized protein LOC111007394 OS=Momordica charantia OX=3673 GN=LOC111007394 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 3.9e-235
Identity = 416/419 (99.28%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP
Sbjct: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           +ANLAPAQKKGISLDVQDV NKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD
Sbjct: 61  KANLAPAQKKGISLDVQDVSNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW
Sbjct: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE
Sbjct: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA 420
           RKDCLRTLYSLIEEAGKANK VEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA
Sbjct: 361 RKDCLRTLYSLIEEAGKANKLVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA 419

[Close]

BLAST of MS002136 vs. ExPASy TrEMBL
Match: A0A6J1E1S5 (uncharacterized protein LOC111430048 OS=Cucurbita moschata OX=3662 GN=LOC111430048 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.1e-213
Identity = 382/420 (90.95%), Postives = 397/420 (94.52%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M W+LLRNVSLRA  HLLNSPTYR NA+PP LLSAP+ S+FRLFSSEND PPK+ S    
Sbjct: 1   MNWSLLRNVSLRARSHLLNSPTYRSNAVPPRLLSAPSTSQFRLFSSENDLPPKEDSGSVS 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           EANL P QKK ISLDVQDV NKELKMRI+KYFKGDEEALPSILEAIL+RKL GKHEDTDD
Sbjct: 61  EANLVPTQKKEISLDVQDVSNKELKMRIDKYFKGDEEALPSILEAILRRKLVGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EEL+MQPLDDVKDKEFESDFEELYETDEEIDDLYN RDIVMKKMVK+EYFNMDDKKW
Sbjct: 121 ELVEELQMQPLDDVKDKEFESDFEELYETDEEIDDLYNTRDIVMKKMVKNEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHGILKDTKECE ILEDMLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPE
Sbjct: 181 DELVEDGIKHGILKDTKECEEILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY++FKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDAR SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of MS002136 vs. ExPASy TrEMBL
Match: A0A6J1JL06 (uncharacterized protein LOC111485553 OS=Cucurbita maxima OX=3661 GN=LOC111485553 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 2.7e-212
Identity = 380/420 (90.48%), Postives = 395/420 (94.05%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M W+LLRNVSLRA  HLLNSPTYR N +PP LLSAPA S+FRLFSSEND PPK+ S    
Sbjct: 1   MNWSLLRNVSLRARSHLLNSPTYRSNVVPPRLLSAPATSQFRLFSSENDLPPKEDSGSVS 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           EANL P QKK I LDVQDV NKELKMRI+KYFKGDEEALPSILEAILQRKL GKHEDTDD
Sbjct: 61  EANLVPTQKKEIPLDVQDVSNKELKMRIDKYFKGDEEALPSILEAILQRKLVGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EEL+MQPLDDVKDKEFESDFEELYETDEEID+LYNARDIVMKKMVK+EYFNMDDKKW
Sbjct: 121 ELVEELQMQPLDDVKDKEFESDFEELYETDEEIDNLYNARDIVMKKMVKNEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           DELVEDGIKHG LKDTKECE ILEDMLSWDKLLPD+MKKKVE KFNELGD+CEKGELEPE
Sbjct: 181 DELVEDGIKHGFLKDTKECEEILEDMLSWDKLLPDDMKKKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY++FKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNLFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGK+ELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKNELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQV-SSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDAR SYVKERLRANPQFMERLRAKKMGSQV SSPLPA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDARTSYVKERLRANPQFMERLRAKKMGSQVSSSPLPA 420

[Close]

BLAST of MS002136 vs. ExPASy TrEMBL
Match: A0A5A7UTN9 (28S ribosomal S35 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004050 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 1.0e-190
Identity = 339/419 (80.91%), Postives = 376/419 (89.74%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           MKW LLRN+SLRA +HLL SP Y  NA P   LS P  SRFRLFSS+NDSPP + S+   
Sbjct: 1   MKWILLRNLSLRARNHLLRSPLYTSNAHPSFFLSPPTTSRFRLFSSDNDSPPNEDSQAVT 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           +ANL   QKK  SL+VQDV NKE K RIEKYFKGDEEAL SILEAIL+RKLAGKHEDTDD
Sbjct: 61  QANLVSTQKKEASLEVQDVSNKEFKTRIEKYFKGDEEALSSILEAILRRKLAGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EELRM+PL+DVKD+EFESDFEEL++TDEEIDDLY A+++VM++M KDEYFNMDDKKW
Sbjct: 121 ELVEELRMKPLEDVKDREFESDFEELHDTDEEIDDLYYAKNLVMERMAKDEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           +++V+D + HGIL DTKECEAILEDML+WDKLLPD++K+KVE KFNELGD+CEKGELEPE
Sbjct: 181 EDIVQDAVNHGILNDTKECEAILEDMLNWDKLLPDDLKEKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY+ FK++ED++VMEYGKMMEAE  P FDETDV DNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNQFKKYEDEVVMEYGKMMEAEA-PTFDETDVQDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDA+  YVKERLRANPQFMERLR+KKM SQVSSP PA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDAQTLYVKERLRANPQFMERLRSKKMSSQVSSPQPA 418

[Close]

BLAST of MS002136 vs. ExPASy TrEMBL
Match: A0A1S3BW85 (uncharacterized protein LOC103494143 OS=Cucumis melo OX=3656 GN=LOC103494143 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 1.0e-190
Identity = 339/419 (80.91%), Postives = 376/419 (89.74%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           MKW LLRN+SLRA +HLL SP Y  NA P   LS P  SRFRLFSS+NDSPP + S+   
Sbjct: 1   MKWILLRNLSLRARNHLLRSPLYTSNAHPSFFLSPPTTSRFRLFSSDNDSPPNEDSQAVT 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYFKGDEEALPSILEAILQRKLAGKHEDTDD 120
           +ANL   QKK  SL+VQDV NKE K RIEKYFKGDEEAL SILEAIL+RKLAGKHEDTDD
Sbjct: 61  QANLVSTQKKEASLEVQDVSNKEFKTRIEKYFKGDEEALSSILEAILRRKLAGKHEDTDD 120

Query: 121 ELIEELRMQPLDDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDKKW 180
           EL+EELRM+PL+DVKD+EFESDFEEL++TDEEIDDLY A+++VM++M KDEYFNMDDKKW
Sbjct: 121 ELVEELRMKPLEDVKDREFESDFEELHDTDEEIDDLYYAKNLVMERMAKDEYFNMDDKKW 180

Query: 181 DELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELEPE 240
           +++V+D + HGIL DTKECEAILEDML+WDKLLPD++K+KVE KFNELGD+CEKGELEPE
Sbjct: 181 EDIVQDAVNHGILNDTKECEAILEDMLNWDKLLPDDLKEKVEAKFNELGDLCEKGELEPE 240

Query: 241 EAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVVFA 300
           EAY+ FK++ED++VMEYGKMMEAE  P FDETDV DNKKDLDDPPGEGPILRWQTRVVFA
Sbjct: 241 EAYNQFKKYEDEVVMEYGKMMEAEA-PTFDETDVQDNKKDLDDPPGEGPILRWQTRVVFA 300

Query: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360
           PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
Sbjct: 301 PGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN 360

Query: 361 RKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLPA 420
           RKDCLRTL+SLIEEAGKANK VEDA+  YVKERLRANPQFMERLR+KKM SQVSSP PA
Sbjct: 361 RKDCLRTLFSLIEEAGKANKLVEDAQTLYVKERLRANPQFMERLRSKKMSSQVSSPQPA 418

[Close]

BLAST of MS002136 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 523.5 bits (1347), Expect = 1.6e-148
Identity = 273/424 (64.39%), Postives = 336/424 (79.25%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLN---SPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSE 60
           M+  LLRN SL A   +L+   +    PN      ++APA  +FR FSSE+     ++S 
Sbjct: 1   MRGALLRNASLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESG----ENST 60

Query: 61  GAPEANLAPAQKKGISLDVQDVRNKELKMRIEKYF-KGDEEALPSILEAILQRKLAGKHE 120
            APE++   + +K   L V+DV NKELK RIEKYF +G+E+ALP ++EA+LQR+L  KH 
Sbjct: 61  TAPESSPTDSPEKK-DLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHA 120

Query: 121 DTDDELIEELRMQPL-DDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNM 180
           +TDDEL+E++   P  DDVKD++FESDFEE + TDEE++DLYN+ + V +KM K+E+FNM
Sbjct: 121 ETDDELLEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNEFFNM 180

Query: 181 DDKKWDELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKG 240
           DDKKWD ++ +GI+HG L DTKECE ILEDML WD+LLPD++KKKVE KFNELGDMCE+G
Sbjct: 181 DDKKWDHMIREGIQHGCLTDTKECEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMCERG 240

Query: 241 ELEPEEAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQT 300
           E+E E AY +FKEFED+MV++YG  MEAEGPP+F ETD  D   DLDDPPG+GPILRWQ+
Sbjct: 241 EIEAEAAYELFKEFEDEMVIQYGDQMEAEGPPQFGETDASDRNTDLDDPPGKGPILRWQS 300

Query: 301 RVVFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFE 360
           R+VFAPGGDAWHPKNRKVK+SVTVKELGLSK+Q +RLRELVGKRYH GKDELTITSERFE
Sbjct: 301 RIVFAPGGDAWHPKNRKVKMSVTVKELGLSKHQAKRLRELVGKRYHSGKDELTITSERFE 360

Query: 361 HREENRKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSS 420
           HREENRKDCLRTLY LIEEAGKANK  ED R SYVK+RLRANP FM++L+AK + S+ S 
Sbjct: 361 HREENRKDCLRTLYGLIEEAGKANKIAEDIRTSYVKQRLRANPAFMQKLQAKIIRSKESD 419

[Close]

BLAST of MS002136 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 523.5 bits (1347), Expect = 1.6e-148
Identity = 273/424 (64.39%), Postives = 336/424 (79.25%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLN---SPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSE 60
           M+  LLRN SL A   +L+   +    PN      ++APA  +FR FSSE+     ++S 
Sbjct: 1   MRGALLRNASLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESG----ENST 60

Query: 61  GAPEANLAPAQKKGISLDVQDVRNKELKMRIEKYF-KGDEEALPSILEAILQRKLAGKHE 120
            APE++   + +K   L V+DV NKELK RIEKYF +G+E+ALP ++EA+LQR+L  KH 
Sbjct: 61  TAPESSPTDSPEKK-DLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHA 120

Query: 121 DTDDELIEELRMQPL-DDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNM 180
           +TDDEL+E++   P  DDVKD++FESDFEE + TDEE++DLYN+ + V +KM K+E+FNM
Sbjct: 121 ETDDELLEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNEFFNM 180

Query: 181 DDKKWDELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKG 240
           DDKKWD ++ +GI+HG L DTKECE ILEDML WD+LLPD++KKKVE KFNELGDMCE+G
Sbjct: 181 DDKKWDHMIREGIQHGCLTDTKECEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMCERG 240

Query: 241 ELEPEEAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQT 300
           E+E E AY +FKEFED+MV++YG  MEAEGPP+F ETD  D   DLDDPPG+GPILRWQ+
Sbjct: 241 EIEAEAAYELFKEFEDEMVIQYGDQMEAEGPPQFGETDASDRNTDLDDPPGKGPILRWQS 300

Query: 301 RVVFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFE 360
           R+VFAPGGDAWHPKNRKVK+SVTVKELGLSK+Q +RLRELVGKRYH GKDELTITSERFE
Sbjct: 301 RIVFAPGGDAWHPKNRKVKMSVTVKELGLSKHQAKRLRELVGKRYHSGKDELTITSERFE 360

Query: 361 HREENRKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSS 420
           HREENRKDCLRTLY LIEEAGKANK  ED R SYVK+RLRANP FM++L+AK + S+ S 
Sbjct: 361 HREENRKDCLRTLYGLIEEAGKANKIAEDIRTSYVKQRLRANPAFMQKLQAKIIRSKESD 419

[Close]

BLAST of MS002136 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 504.6 bits (1298), Expect = 7.7e-143
Identity = 264/421 (62.71%), Postives = 328/421 (77.91%), Query Frame = 0


Query: 1   MKWTLLRNVSLRACHHLLNSPTYRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEGAP 60
           M+  L RN SL A   +L+S    PN      ++APA  +FR FSSE+      ++E +P
Sbjct: 1   MRGALFRNASLCARRIILSS-RISPNVPFLTPIAAPAPPKFRFFSSESGENSTTATESSP 60

Query: 61  EANLAPAQKKGISLDVQDVRNKELKMRIEKYF-KGDEEALPSILEAILQRKLAGKHEDTD 120
             +   + KK   L V+DV NKELK RI+K F +G+E+ALP ++EA+LQR+L  KH +TD
Sbjct: 61  TDS---SDKK--DLVVEDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETD 120

Query: 121 DELIEELRMQPL-DDVKDKEFESDFEELYETDEEIDDLYNARDIVMKKMVKDEYFNMDDK 180
           DEL+E++   P  DDVKD++FESDFEE + TDEE++DLYN+ + V +KM K E+FNMDD 
Sbjct: 121 DELMEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKKEFFNMDDN 180

Query: 181 KWDELVEDGIKHGILKDTKECEAILEDMLSWDKLLPDEMKKKVEEKFNELGDMCEKGELE 240
           KWD ++ +GI+HG L DTK+CE ILEDML WD+LLPD++KKKVE KFNELGDMCE+GE+E
Sbjct: 181 KWDHMIREGIQHGCLTDTKQCEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMCERGEIE 240

Query: 241 PEEAYSMFKEFEDQMVMEYGKMMEAEGPPKFDETDVPDNKKDLDDPPGEGPILRWQTRVV 300
            E AY +FKEFED+MV++YG  MEAEGPP+F ETD  D   DLDDP G+GPILRWQ+R+V
Sbjct: 241 AEAAYELFKEFEDEMVIQYGDQMEAEGPPQFGETDTSDRNTDLDDPSGKGPILRWQSRIV 300

Query: 301 FAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHRE 360
           FAPGGDAWHPKNRKVK+SVTVKELGLS +Q +RLRELVGKRYH GKDELTIT ERFEHRE
Sbjct: 301 FAPGGDAWHPKNRKVKMSVTVKELGLSNHQAKRLRELVGKRYHSGKDELTITCERFEHRE 360

Query: 361 ENRKDCLRTLYSLIEEAGKANKFVEDARASYVKERLRANPQFMERLRAKKMGSQVSSPLP 420
           ENRKDCLRTLY LIEEAGKANK  ED R SYVK+RLRA+P FM++L+AK + S+ S+ + 
Sbjct: 361 ENRKDCLRTLYGLIEEAGKANKIAEDIRTSYVKQRLRASPAFMQKLQAKIIRSKESNAIN 415

[Close]

BLAST of MS002136 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-08
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 6   LRNVSLRACHHLLNSPT-------YRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEG 65
           L+ V      ++L+SP          P  + P  L   A SRF  FSSE+DS        
Sbjct: 5   LQRVPSLLARNILHSPANFRHLRINNPRVVVP--LFERAISRFVFFSSESDS-------- 64

Query: 66  APEANLAPAQKKGISLDVQDVRNKELKMRIEKYF-KGDEEALPSILEAILQRKLAGKHED 125
                      +G   + + +  +ELK RI+ +   G+E+A+P + EA++ RKL+GKH+D
Sbjct: 65  ----------SRGFRTE-EVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDD 124

Query: 126 TDDELIEELRMQPLDDV-KDKEFESDFE-----ELYETDEEIDDL 157
           +DDE+++ +R  P++D  K  + +SD E     +  ++D E DDL
Sbjct: 125 SDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGDSSDSDIESDDL 148

[Close]

BLAST of MS002136 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-08
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 6   LRNVSLRACHHLLNSPT-------YRPNALPPCLLSAPARSRFRLFSSENDSPPKDSSEG 65
           L+ V      ++L+SP          P  + P  L   A SRF  FSSE+DS        
Sbjct: 5   LQRVPSLLARNILHSPANFRHLRINNPRVVVP--LFERAISRFVFFSSESDS-------- 64

Query: 66  APEANLAPAQKKGISLDVQDVRNKELKMRIEKYF-KGDEEALPSILEAILQRKLAGKHED 125
                      +G   + + +  +ELK RI+ +   G+E+A+P + EA++ RKL+GKH+D
Sbjct: 65  ----------SRGFRTE-EVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDD 124

Query: 126 TDDELIEELRMQPLDDV-KDKEFESDFE-----ELYETDEEIDDL 157
           +DDE+++ +R  P++D  K  + +SD E     +  ++D E DDL
Sbjct: 125 SDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGDSSDSDIESDDL 148

The following BLAST results are available for this feature:

BLAST of MS002136 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135439.1	8.0e-235	99.28	uncharacterized protein LOC111007394 [Momordica charantia]	[more]
XP_022921942.1	2.3e-213	90.95	uncharacterized protein LOC111430048 [Cucurbita moschata]	[more]
KAG6589616.1	3.0e-213	90.95	hypothetical protein SDJN03_15039, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516875.1	6.6e-213	90.71	uncharacterized protein LOC111780645 [Cucurbita pepo subsp. pepo]	[more]
XP_022988239.1	5.6e-212	90.48	uncharacterized protein LOC111485553 [Cucurbita maxima]	[more]

BLAST of MS002136 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03976	3.6e-04	37.68	37S ribosomal protein S24, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of MS002136 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1G2	3.9e-235	99.28	uncharacterized protein LOC111007394 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1E1S5	1.1e-213	90.95	uncharacterized protein LOC111430048 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A6J1JL06	2.7e-212	90.48	uncharacterized protein LOC111485553 OS=Cucurbita maxima OX=3661 GN=LOC111485553...	[more]
A0A5A7UTN9	1.0e-190	80.91	28S ribosomal S35 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A1S3BW85	1.0e-190	80.91	uncharacterized protein LOC103494143 OS=Cucumis melo OX=3656 GN=LOC103494143 PE=...	[more]

BLAST of MS002136 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18240.1	1.6e-148	64.39	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.2	1.6e-148	64.39	Ribosomal protein S24/S35, mitochondrial	[more]
AT4G21460.1	7.7e-143	62.71	Ribosomal protein S24/S35, mitochondrial	[more]
AT1G73770.1	3.2e-08	31.52	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G73770.2	3.2e-08	31.52	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019349	Ribosomal protein S24/S35, mitochondrial, conserved domain	PFAM	PF10213	MRP-S28	coord: 306..386 e-value: 6.2E-18 score: 65.4
None	No IPR available	GENE3D	3.30.160.20		coord: 291..415 e-value: 7.3E-12 score: 47.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..286
IPR039848	Ribosomal protein S24/S35, mitochondrial	PANTHER	PTHR13490	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28	coord: 68..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002136.1	MS002136.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
molecular_function	GO:0003735	structural constituent of ribosome