MS002128 (gene) Bitter gourd (TR) v1

Overview


Name	MS002128
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor JAMYB-like
Location	scaffold30: 2554233 .. 2555171 (+)
RNA-Seq Expression	MS002128
Synteny	MS002128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGCAAAGTCTTTGATGGCAAAGAGCCAAACTAGTAGTTGCTCCTCTAGTACTGTTGTTGAGGATGATCAAATTGGCCTTAGGAGAGGACCATGGACTGCCGATGAGGATTCGCTTCTTATTCGTTCCATCTCCGTCCATGGCGAAGGCCGATGGAACTTGCTCGCCATTCGTTCAGGTATATCTGATAATATTTTTGTTTCTTATTTTTCATTCGATAAGCTGTTGTATTGTTGTTAAATTTGATGTTTTTTTTTTTAATTAGGGCTGAGACGGACGGGGAAGAGTTGCCGTTTGAGATGGTTGAATTATCTGAAACCCGACGTCAAAAGAGGGAACCTTTCTCCTCATGAGCAGCTTTTGATTCTTGATCTCCACTGCAGATGGGGTAACAGGTGAATAAATTTTAGACTCTCGTCCATCTGAACATAACGGATTGATTTTATTTTCTAACTTTTATGTATGGCGGTTTTGGTTTTGGTTAGGTGGTCAAAGATAGCGCAAGAGTTACCGGGAAGAACGGATAATGAGATAAAGAACTACTGGAGAACCCGGGTTCAGAGGCAGGCAAAGCTTCTGAATATCGACACGAATAGCCCCGAATTCAAAGACATTATAAACCGATTTTGGATCCCCAGATTGGTTCAACAAATTCACGAAGAGTCTTCTAATTCCTCGCCTTCTTCTTCTTCTTCTTCCTCTTCACCACAACTTTCGGATTCGGATGAGAAACGGCCCCGTTTTGTAACCGCAGAAGAAGACGAAAAAGTCACCGGTTCTGATCCATTATTATTCTCCGACGTTGTTCCGTCATGGAATCACGGCGGCGGCGGAGATATGGGGGATTTTGATTACCCAATAGGCGAATTTACGAGTTGGATGGAGGAGGATGATTCCGACTGCGGCGGCTTATGGAACTTTGAGGGGTTGTGGCAATTC

mRNA sequence

GTAGCAAAGTCTTTGATGGCAAAGAGCCAAACTAGTAGTTGCTCCTCTAGTACTGTTGTTGAGGATGATCAAATTGGCCTTAGGAGAGGACCATGGACTGCCGATGAGGATTCGCTTCTTATTCGTTCCATCTCCGTCCATGGCGAAGGCCGATGGAACTTGCTCGCCATTCGTTCAGGGCTGAGACGGACGGGGAAGAGTTGCCGTTTGAGATGGTTGAATTATCTGAAACCCGACGTCAAAAGAGGGAACCTTTCTCCTCATGAGCAGCTTTTGATTCTTGATCTCCACTGCAGATGGGGTAACAGGTGGTCAAAGATAGCGCAAGAGTTACCGGGAAGAACGGATAATGAGATAAAGAACTACTGGAGAACCCGGGTTCAGAGGCAGGCAAAGCTTCTGAATATCGACACGAATAGCCCCGAATTCAAAGACATTATAAACCGATTTTGGATCCCCAGATTGGTTCAACAAATTCACGAAGAGTCTTCTAATTCCTCGCCTTCTTCTTCTTCTTCTTCCTCTTCACCACAACTTTCGGATTCGGATGAGAAACGGCCCCGTTTTGTAACCGCAGAAGAAGACGAAAAAGTCACCGGTTCTGATCCATTATTATTCTCCGACGTTGTTCCGTCATGGAATCACGGCGGCGGCGGAGATATGGGGGATTTTGATTACCCAATAGGCGAATTTACGAGTTGGATGGAGGAGGATGATTCCGACTGCGGCGGCTTATGGAACTTTGAGGGGTTGTGGCAATTC

Coding sequence (CDS)

GTAGCAAAGTCTTTGATGGCAAAGAGCCAAACTAGTAGTTGCTCCTCTAGTACTGTTGTTGAGGATGATCAAATTGGCCTTAGGAGAGGACCATGGACTGCCGATGAGGATTCGCTTCTTATTCGTTCCATCTCCGTCCATGGCGAAGGCCGATGGAACTTGCTCGCCATTCGTTCAGGGCTGAGACGGACGGGGAAGAGTTGCCGTTTGAGATGGTTGAATTATCTGAAACCCGACGTCAAAAGAGGGAACCTTTCTCCTCATGAGCAGCTTTTGATTCTTGATCTCCACTGCAGATGGGGTAACAGGTGGTCAAAGATAGCGCAAGAGTTACCGGGAAGAACGGATAATGAGATAAAGAACTACTGGAGAACCCGGGTTCAGAGGCAGGCAAAGCTTCTGAATATCGACACGAATAGCCCCGAATTCAAAGACATTATAAACCGATTTTGGATCCCCAGATTGGTTCAACAAATTCACGAAGAGTCTTCTAATTCCTCGCCTTCTTCTTCTTCTTCTTCCTCTTCACCACAACTTTCGGATTCGGATGAGAAACGGCCCCGTTTTGTAACCGCAGAAGAAGACGAAAAAGTCACCGGTTCTGATCCATTATTATTCTCCGACGTTGTTCCGTCATGGAATCACGGCGGCGGCGGAGATATGGGGGATTTTGATTACCCAATAGGCGAATTTACGAGTTGGATGGAGGAGGATGATTCCGACTGCGGCGGCTTATGGAACTTTGAGGGGTTGTGGCAATTC

Protein sequence

VAKSLMAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSPQLSDSDEKRPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGLWNFEGLWQF

Homology

[Close]

BLAST of MS002128 vs. NCBI nr
Match: XP_022135411.1 (transcription factor JAMYB-like [Momordica charantia])

HSP 1 Score: 512.7 bits (1319), Expect = 1.8e-141
Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 6   MAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTG 65
           MAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTG
Sbjct: 1   MAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTG 60

Query: 66  KSCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRT 125
           KSCRLRWLNYLKPDVKRG+LSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRT
Sbjct: 61  KSCRLRWLNYLKPDVKRGSLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRT 120

Query: 126 RVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSPQLSDSDEK 185
           RVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSP SSSSSSSPQLSDSDEK
Sbjct: 121 RVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPPSSSSSSSPQLSDSDEK 180

Query: 186 RPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGL 245
           RPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGL
Sbjct: 181 RPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGL 240

Query: 246 WNFEGLWQF 255
           WNFEGLWQF
Sbjct: 241 WNFEGLWQF 249

[Close]

BLAST of MS002128 vs. NCBI nr
Match: KAG6587655.1 (Transcription factor MYB2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.4 bits (890), Expect = 1.0e-91
Identity = 191/275 (69.45%), Postives = 207/275 (75.27%), Query Frame = 0


Query: 7   AKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGK 66
           ++SQ+SSCSSS VVED Q GLRRGPWT DEDSLL+ SISVHGEGRWNLLAIRSGLRRTGK
Sbjct: 9   SQSQSSSCSSS-VVEDTQNGLRRGPWTVDEDSLLVHSISVHGEGRWNLLAIRSGLRRTGK 68

Query: 67  SCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTR 126
           SCRLRWLNYLKPDVKRGNLSP EQLLILDLH RWGNRWSKIAQ LPGRTDNEIKNYWRTR
Sbjct: 69  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTR 128

Query: 127 VQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSP--------- 186
           VQ+QAKLLNIDTNS EFK+IINRFWIPRLVQQI+E  S++SPSSS SS  P         
Sbjct: 129 VQKQAKLLNIDTNSSEFKEIINRFWIPRLVQQINE--SSNSPSSSFSSPPPPPNMPPARP 188

Query: 187 --QLSDSDE------KRPRFVTAEEDEKVTG------SDPLLFSDVVPSWNHGGGGDMGD 246
             QLSD+D       KR  F T +             SDP  FSD VPSWNHG      D
Sbjct: 189 ASQLSDADTLPAADGKRRHFDTEQNSTSSESMDISQVSDP--FSD-VPSWNHGSEMTAAD 248

Query: 247 FDYPIG----EFTSWMEEDDSDCGGLWNFEGLWQF 255
           F YPIG    + T W+++DDS  G LWNF+GLWQF
Sbjct: 249 FQYPIGDSRPQLTGWVDDDDSFGGCLWNFDGLWQF 277

[Close]

BLAST of MS002128 vs. NCBI nr
Match: XP_022926469.1 (transcription factor JAMYB-like [Cucurbita moschata])

HSP 1 Score: 347.4 bits (890), Expect = 1.0e-91
Identity = 191/275 (69.45%), Postives = 207/275 (75.27%), Query Frame = 0


Query: 7   AKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGK 66
           ++SQ+SSCSSS VVED Q GLRRGPWT DEDSLL+ SISVHGEGRWNLLAIRSGLRRTGK
Sbjct: 17  SQSQSSSCSSS-VVEDTQNGLRRGPWTVDEDSLLVHSISVHGEGRWNLLAIRSGLRRTGK 76

Query: 67  SCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTR 126
           SCRLRWLNYLKPDVKRGNLSP EQLLILDLH RWGNRWSKIAQ LPGRTDNEIKNYWRTR
Sbjct: 77  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTR 136

Query: 127 VQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSP--------- 186
           VQ+QAKLLNIDTNS EFK+IINRFWIPRLVQQI+E  S++SPSSS SS  P         
Sbjct: 137 VQKQAKLLNIDTNSSEFKEIINRFWIPRLVQQINE--SSNSPSSSFSSPPPPPNMPPARP 196

Query: 187 --QLSDSDE------KRPRFVTAEEDEKVTG------SDPLLFSDVVPSWNHGGGGDMGD 246
             QLSD+D       KR  F T +             SDP  FSD VPSWNHG      D
Sbjct: 197 ASQLSDADTLPAADGKRRHFDTEQNSTSSESMDISQVSDP--FSD-VPSWNHGSEMTAAD 256

Query: 247 FDYPIGE----FTSWMEEDDSDCGGLWNFEGLWQF 255
           F YPIG+     T W+++DDS  G LWNF+GLWQF
Sbjct: 257 FQYPIGDSRSPLTGWVDDDDSFGGCLWNFDGLWQF 285

[Close]

BLAST of MS002128 vs. NCBI nr
Match: XP_023531056.1 (transcription factor JAMYB-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.4 bits (882), Expect = 8.6e-91
Identity = 190/274 (69.34%), Postives = 207/274 (75.55%), Query Frame = 0


Query: 7   AKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGK 66
           ++SQ+SSCSSS VVED+Q GLRRGPWT DEDSLL+ SISVHGEGRWNLLAIRSGLRRTGK
Sbjct: 9   SQSQSSSCSSS-VVEDNQNGLRRGPWTVDEDSLLVHSISVHGEGRWNLLAIRSGLRRTGK 68

Query: 67  SCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTR 126
           SCRLRWLNYLKPDV RGNLSP EQLLILDLH RWGNRWSKIAQ LPGRTDNEIKNYWRTR
Sbjct: 69  SCRLRWLNYLKPDVIRGNLSPQEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTR 128

Query: 127 VQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSP--------- 186
           VQ+QAKLLNIDTNS EFK+IINRFWIPRLVQQI+E  S++SPSSS SS  P         
Sbjct: 129 VQKQAKLLNIDTNSSEFKEIINRFWIPRLVQQINE--SSNSPSSSFSSPPPPNMPPARPA 188

Query: 187 -QLSDSDE------KRPRFVTAEEDEKVTG------SDPLLFSDVVPSWNHGGGGDMGDF 246
            QLSD+D       KR  F T +             SDP  FSD VPSWNHG      DF
Sbjct: 189 SQLSDTDTLPAADGKRRHFDTEQNSTSSESMDISQVSDP--FSD-VPSWNHGSEMTAVDF 248

Query: 247 DYPIGE----FTSWMEEDDSDCGGLWNFEGLWQF 255
            YPIG+     T W+++DDS  G LWNF+GLWQF
Sbjct: 249 QYPIGDSRSPLTGWVDDDDSFGGCLWNFDGLWQF 276

[Close]

BLAST of MS002128 vs. NCBI nr
Match: XP_038901337.1 (transcription factor MYB62-like [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-88
Identity = 180/267 (67.42%), Postives = 209/267 (78.28%), Query Frame = 0


Query: 7   AKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGK 66
           ++SQ+SS  SS V+EDDQ  +RRGPW+ DEDSLLI SISVHGEGRWNLLAIRSGLRRTGK
Sbjct: 23  SQSQSSS-GSSIVIEDDQSEVRRGPWSVDEDSLLIHSISVHGEGRWNLLAIRSGLRRTGK 82

Query: 67  SCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTR 126
           SCRLRWLNYLKPDVKRGNLSP EQLLILDLH RWGNRWSKIAQ LPGRTDNEIKNYWRTR
Sbjct: 83  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSRWGNRWSKIAQLLPGRTDNEIKNYWRTR 142

Query: 127 VQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNS--SPSSSSSSSSPQLSDSD- 186
           VQ+QAK+LNI+ NSPEFKDII+R WIPRL+ QI+E SS+S   P+++++S +PQLSDSD 
Sbjct: 143 VQKQAKVLNININSPEFKDIIHRCWIPRLLHQINESSSSSPPPPTTAATSPTPQLSDSDS 202

Query: 187 -----------EKRPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGG-GDMGDFDYPIG-- 246
                      +K     ++E  +    SDPL  SD VPSWNHGGG     +FDYPIG  
Sbjct: 203 VPATDGNRRHFDKERNSTSSESMDISQVSDPL--SD-VPSWNHGGGQTTAANFDYPIGDS 262

Query: 247 --EFTSWMEEDDSDCGGLWNFEGLWQF 255
             + T W+++DDS  G LWNF+GLWQF
Sbjct: 263 GLQLTDWIDDDDSFGGCLWNFDGLWQF 285

[Close]

BLAST of MS002128 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-56
Identity = 100/162 (61.73%), Postives = 125/162 (77.16%), Query Frame = 0


Query: 21  EDDQIG--LRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKP 80
           E++ +G  LRRGPWT +ED LL+  I+ HGEGRWN LA  +GL+RTGKSCRLRWLNYL+P
Sbjct: 12  EEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRP 71

Query: 81  DVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDT 140
           D++RGN++P EQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AK L  D 
Sbjct: 72  DLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDV 131

Query: 141 NSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSPQLS 181
           NS +FKD++   W+PRLV++I   ++         + +P LS
Sbjct: 132 NSQQFKDVMRYLWMPRLVERIQAAAAGQQQQQEGGTDTPPLS 173

[Close]

BLAST of MS002128 vs. ExPASy Swiss-Prot
Match: Q2QZJ8 (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-55
Identity = 119/232 (51.29%), Postives = 141/232 (60.78%), Query Frame = 0


Query: 27  LRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVKRGNLS 86
           LRRGPWT DED  LI  IS HGEGRWN LA  +GL+RTGKSCRLRWLNYL+PDVKRGN +
Sbjct: 29  LRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGNFT 88

Query: 87  PHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSPEFKDI 146
             EQLLILDLH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AK LN D NS  FKD 
Sbjct: 89  AEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKDA 148

Query: 147 INRFWIPRLVQQIHEES---------SNSSPSSSSSSSSPQLSDSDEKRPRFVTAEEDEK 206
           +   W+PRL ++IH  +         SN+  S  S  +   +++  +  P  VT+   + 
Sbjct: 149 MKYLWMPRLAERIHARAGAVDDSGDYSNNDLSCVSGVTMATVANCFDGSPSMVTSSSSDS 208

Query: 207 VTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGLWNFE 250
            T     L    +    HG    M   D        WM+E D +    W+ E
Sbjct: 209 FTSESQDL--KKINLHVHGDDEKMNSED--------WMQEVDHE---FWSTE 247

[Close]

BLAST of MS002128 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.9e-55
Identity = 98/159 (61.64%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 21  EDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDV 80
           E +   LRRGPWT +ED+LL   I  +GEGRWN +A  +GL+RTGKSCRLRWLNYLKPD+
Sbjct: 13  ESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDI 72

Query: 81  KRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNS 140
           +RGNL+P EQLLIL+LH +WGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+QA+ LNI++NS
Sbjct: 73  RRGNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNS 132

Query: 141 PEFKDIINRFWIPRLVQQIHEESSNSS----PSSSSSSS 176
            +F D +  FW+PRL++++ + SS ++    P +++++S
Sbjct: 133 DKFFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNS 171

[Close]

BLAST of MS002128 vs. ExPASy Swiss-Prot
Match: Q9LDE1 (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.1e-54
Identity = 95/155 (61.29%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 22  DDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVK 81
           +D++ L+RGPWTA+ED  L+  I+ +GEGRWN L+  +GL+RTGKSCRLRWLNYL+PDV+
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 82  RGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSP 141
           RGN++  EQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AK L  D NS 
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 142 EFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSS 177
           +FKD +   W+PRLV++I   S++S+ ++++++++
Sbjct: 134 QFKDTMKYLWMPRLVERIQSASASSAAAATTTTTT 168

[Close]

BLAST of MS002128 vs. ExPASy Swiss-Prot
Match: Q9FGY3 (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.7e-53
Identity = 101/158 (63.92%), Postives = 123/158 (77.85%), Query Frame = 0


Query: 22  DDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVK 81
           ++++ +RRGPWT +ED  LI  I+ HGEGRWN LA  + L+RTGKSCRLRWLNYL+PDV+
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 82  RGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSP 141
           RGN++  EQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AK L  D NS 
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 142 EFKDIINRFWIPRLVQQIHEESSNS-SPSSSSSSSSPQ 179
           +FKD +   W+PRLV++I   S  S S SS  ++SS Q
Sbjct: 141 QFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTSSDQ 178

[Close]

BLAST of MS002128 vs. ExPASy TrEMBL
Match: A0A6J1C0P4 (transcription factor JAMYB-like OS=Momordica charantia OX=3673 GN=LOC111007370 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 8.9e-142
Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 6   MAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTG 65
           MAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTG
Sbjct: 1   MAKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTG 60

Query: 66  KSCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRT 125
           KSCRLRWLNYLKPDVKRG+LSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRT
Sbjct: 61  KSCRLRWLNYLKPDVKRGSLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRT 120

Query: 126 RVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSPQLSDSDEK 185
           RVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSP SSSSSSSPQLSDSDEK
Sbjct: 121 RVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPPSSSSSSSPQLSDSDEK 180

Query: 186 RPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGL 245
           RPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGL
Sbjct: 181 RPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGGGGDMGDFDYPIGEFTSWMEEDDSDCGGL 240

Query: 246 WNFEGLWQF 255
           WNFEGLWQF
Sbjct: 241 WNFEGLWQF 249

[Close]

BLAST of MS002128 vs. ExPASy TrEMBL
Match: A0A6J1EF71 (transcription factor JAMYB-like OS=Cucurbita moschata OX=3662 GN=LOC111433607 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.9e-92
Identity = 191/275 (69.45%), Postives = 207/275 (75.27%), Query Frame = 0


Query: 7   AKSQTSSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGK 66
           ++SQ+SSCSSS VVED Q GLRRGPWT DEDSLL+ SISVHGEGRWNLLAIRSGLRRTGK
Sbjct: 17  SQSQSSSCSSS-VVEDTQNGLRRGPWTVDEDSLLVHSISVHGEGRWNLLAIRSGLRRTGK 76

Query: 67  SCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTR 126
           SCRLRWLNYLKPDVKRGNLSP EQLLILDLH RWGNRWSKIAQ LPGRTDNEIKNYWRTR
Sbjct: 77  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTR 136

Query: 127 VQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSP--------- 186
           VQ+QAKLLNIDTNS EFK+IINRFWIPRLVQQI+E  S++SPSSS SS  P         
Sbjct: 137 VQKQAKLLNIDTNSSEFKEIINRFWIPRLVQQINE--SSNSPSSSFSSPPPPPNMPPARP 196

Query: 187 --QLSDSDE------KRPRFVTAEEDEKVTG------SDPLLFSDVVPSWNHGGGGDMGD 246
             QLSD+D       KR  F T +             SDP  FSD VPSWNHG      D
Sbjct: 197 ASQLSDADTLPAADGKRRHFDTEQNSTSSESMDISQVSDP--FSD-VPSWNHGSEMTAAD 256

Query: 247 FDYPIGE----FTSWMEEDDSDCGGLWNFEGLWQF 255
           F YPIG+     T W+++DDS  G LWNF+GLWQF
Sbjct: 257 FQYPIGDSRSPLTGWVDDDDSFGGCLWNFDGLWQF 285

[Close]

BLAST of MS002128 vs. ExPASy TrEMBL
Match: A0A6J1I942 (transcription factor MYB62-like OS=Cucurbita maxima OX=3661 GN=LOC111472194 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.1e-86
Identity = 185/281 (65.84%), Postives = 206/281 (73.31%), Query Frame = 0


Query: 4   SLMA---KSQTSSCS-SSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRS 63
           SLMA   K+Q+ S S SS+VVED+Q GLRRGPWT DEDSLL+ SISVHGEGRWNLLAIRS
Sbjct: 5   SLMASPCKTQSQSSSYSSSVVEDNQNGLRRGPWTVDEDSLLVHSISVHGEGRWNLLAIRS 64

Query: 64  GLRRTGKSCRLRWLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEI 123
           GLRRTGKSCRLRWLNYLKPDVKRGNLSP EQLLILDLH RWGNRWSKIAQ LPGRTDNEI
Sbjct: 65  GLRRTGKSCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSRWGNRWSKIAQHLPGRTDNEI 124

Query: 124 KNYWRTRVQRQAKLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSP-- 183
           KNYWRTRVQ+QAKLLNIDTNS EFK+IIN FWIPRLV QI+E  S++SPSSS SS  P  
Sbjct: 125 KNYWRTRVQKQAKLLNIDTNSSEFKEIINCFWIPRLVHQINE--SSNSPSSSFSSPPPPN 184

Query: 184 --------QLSDSD------------EKRPRFVTAEEDEKVTGSDPLLFSDVVPSWNHGG 243
                   QLSD+D            +      ++E  +    SDP  FSD VPSWNH  
Sbjct: 185 MPPARLASQLSDTDTLPAADGKGRHFDTEQNSTSSESVDISQVSDP--FSD-VPSWNHCS 244

Query: 244 GGDMGDFDYPIGE----FTSWMEEDDSDCGGLWNFEGLWQF 255
                 F+YPIG      T W+++DD+  G LWNF+GLWQF
Sbjct: 245 EMTAAGFEYPIGNSRSPLTGWVDDDDTFGGCLWNFDGLWQF 280

[Close]

BLAST of MS002128 vs. ExPASy TrEMBL
Match: A0A5D3DYB4 (Transcription factor MYB24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00700 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.8e-86
Identity = 171/258 (66.28%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 12  SSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLR 71
           SS  SS+ +EDDQ  +RRGPW+ DEDSLLI SISVHGEGRWNLLAIRSGLRRTGKSCRLR
Sbjct: 15  SSSGSSSFIEDDQSEVRRGPWSVDEDSLLIHSISVHGEGRWNLLAIRSGLRRTGKSCRLR 74

Query: 72  WLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQA 131
           WLNYLKP+V+RGNLSP EQLLILDLH RWGNRWSKIAQ+LPGRTDNEIKNYWRT+VQ+QA
Sbjct: 75  WLNYLKPEVRRGNLSPQEQLLILDLHSRWGNRWSKIAQQLPGRTDNEIKNYWRTKVQKQA 134

Query: 132 KLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSPQLSDSDE------K 191
           K+LNI TNSPEFKDIINR WIPRL+ QI++ SS   P ++++  +PQ SDSD        
Sbjct: 135 KILNIGTNSPEFKDIINRLWIPRLLHQINDSSSPPPPHTATTHPTPQFSDSDSLPTVDGN 194

Query: 192 RPRF----VTAEEDEKVTGSDPLLFSDVVPSWNHGGGGD-MGDFDYPIG----EFTSWME 251
           R  F     ++E  E    SDP  FSD VPSWNHGGG     +F+Y  G    + T W++
Sbjct: 195 RRHFEQNSTSSESVEISQVSDP--FSD-VPSWNHGGGETAAANFEYTTGDSLLQHTDWID 254

Query: 252 EDDSDCGGLWNFEGLWQF 255
           +DDS  G LWNF+GLWQF
Sbjct: 255 DDDSFNGCLWNFDGLWQF 269

[Close]

BLAST of MS002128 vs. ExPASy TrEMBL
Match: A0A1S3BWZ6 (transcription factor MYB24-like OS=Cucumis melo OX=3656 GN=LOC103494131 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.8e-86
Identity = 171/258 (66.28%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 12  SSCSSSTVVEDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLR 71
           SS  SS+ +EDDQ  +RRGPW+ DEDSLLI SISVHGEGRWNLLAIRSGLRRTGKSCRLR
Sbjct: 15  SSSGSSSFIEDDQSEVRRGPWSVDEDSLLIHSISVHGEGRWNLLAIRSGLRRTGKSCRLR 74

Query: 72  WLNYLKPDVKRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQA 131
           WLNYLKP+V+RGNLSP EQLLILDLH RWGNRWSKIAQ+LPGRTDNEIKNYWRT+VQ+QA
Sbjct: 75  WLNYLKPEVRRGNLSPQEQLLILDLHSRWGNRWSKIAQQLPGRTDNEIKNYWRTKVQKQA 134

Query: 132 KLLNIDTNSPEFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSSPQLSDSDE------K 191
           K+LNI TNSPEFKDIINR WIPRL+ QI++ SS   P ++++  +PQ SDSD        
Sbjct: 135 KILNIGTNSPEFKDIINRLWIPRLLHQINDSSSPPPPHTATTHPTPQFSDSDSLPTVDGN 194

Query: 192 RPRF----VTAEEDEKVTGSDPLLFSDVVPSWNHGGGGD-MGDFDYPIG----EFTSWME 251
           R  F     ++E  E    SDP  FSD VPSWNHGGG     +F+Y  G    + T W++
Sbjct: 195 RRHFEQNSTSSESVEISQVSDP--FSD-VPSWNHGGGETAAANFEYTTGDSLLQHTDWID 254

Query: 252 EDDSDCGGLWNFEGLWQF 255
           +DDS  G LWNF+GLWQF
Sbjct: 255 DDDSFNGCLWNFDGLWQF 269

[Close]

BLAST of MS002128 vs. TAIR 10
Match: AT1G68320.1 (myb domain protein 62 )

HSP 1 Score: 215.3 bits (547), Expect = 5.6e-56
Identity = 98/159 (61.64%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 21  EDDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDV 80
           E +   LRRGPWT +ED+LL   I  +GEGRWN +A  +GL+RTGKSCRLRWLNYLKPD+
Sbjct: 13  ESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDI 72

Query: 81  KRGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNS 140
           +RGNL+P EQLLIL+LH +WGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+QA+ LNI++NS
Sbjct: 73  RRGNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNS 132

Query: 141 PEFKDIINRFWIPRLVQQIHEESSNSS----PSSSSSSS 176
            +F D +  FW+PRL++++ + SS ++    P +++++S
Sbjct: 133 DKFFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNS 171

[Close]

BLAST of MS002128 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-55
Identity = 99/158 (62.66%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 28  RRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVKRGNLSP 87
           R+GPWT +ED+LL   IS +GEGRWNLLA  SGL+R GKSCRLRWLNYLKPD+KRGNL+P
Sbjct: 19  RKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCRLRWLNYLKPDIKRGNLTP 78

Query: 88  HEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSPEFKDII 147
            EQLLIL+LH +WGNRWSKI++ LPGRTDN+IKNYWRTRVQ+QA+ LNID+NS +F +++
Sbjct: 79  QEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSNSHKFIEVV 138

Query: 148 NRFWIPRLVQQIHEES-SNSSPSSSSSSSSPQLSDSDE 185
             FW PRL+ +I + S +N+  +++     P L DS +
Sbjct: 139 RSFWFPRLINEIKDNSYTNNIKANAPDLLGPILRDSKD 176

[Close]

BLAST of MS002128 vs. TAIR 10
Match: AT1G48000.1 (myb domain protein 112 )

HSP 1 Score: 212.6 bits (540), Expect = 3.6e-55
Identity = 111/222 (50.00%), Postives = 142/222 (63.96%), Query Frame = 0


Query: 24  QIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVKRG 83
           +I +RRGPWT +ED  L+  IS+HGEGRWN L+  +GL RTGKSCRLRWLNYL+PD++RG
Sbjct: 29  EIEIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRG 88

Query: 84  NLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSPEF 143
           ++S  EQ +IL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AKLL  D NS +F
Sbjct: 89  DISLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQF 148

Query: 144 KDIINRFWIPRLV------QQIHEESSNSSPSSSS-SSSSPQLSDSDEKRPRFVTAEEDE 203
           KD I   W+PRL+      Q +   S++ SP +SS ++++   S S+  R  F       
Sbjct: 149 KDTIKHLWMPRLIERIAATQSVQFTSNHYSPENSSVATATSSTSSSEAVRSSFY------ 208

Query: 204 KVTGSDPLLFSDVVPSWNHG---GGGDMGDFDYPIGEFTSWM 236
              G D + F  +    N G    GGD  +      E   W+
Sbjct: 209 ---GGDQVEFGTLDHMTNGGYWFNGGDTFETLCSFDELNKWL 241

[Close]

BLAST of MS002128 vs. TAIR 10
Match: AT3G06490.1 (myb domain protein 108 )

HSP 1 Score: 212.6 bits (540), Expect = 3.6e-55
Identity = 95/155 (61.29%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 22  DDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVK 81
           +D++ L+RGPWTA+ED  L+  I+ +GEGRWN L+  +GL+RTGKSCRLRWLNYL+PDV+
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 82  RGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSP 141
           RGN++  EQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AK L  D NS 
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 142 EFKDIINRFWIPRLVQQIHEESSNSSPSSSSSSSS 177
           +FKD +   W+PRLV++I   S++S+ ++++++++
Sbjct: 134 QFKDTMKYLWMPRLVERIQSASASSAAAATTTTTT 168

[Close]

BLAST of MS002128 vs. TAIR 10
Match: AT5G49620.1 (myb domain protein 78 )

HSP 1 Score: 208.4 bits (529), Expect = 6.9e-54
Identity = 101/158 (63.92%), Postives = 123/158 (77.85%), Query Frame = 0


Query: 22  DDQIGLRRGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPDVK 81
           ++++ +RRGPWT +ED  LI  I+ HGEGRWN LA  + L+RTGKSCRLRWLNYL+PDV+
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 82  RGNLSPHEQLLILDLHCRWGNRWSKIAQELPGRTDNEIKNYWRTRVQRQAKLLNIDTNSP 141
           RGN++  EQLLIL+LH RWGNRWSKIAQ LPGRTDNEIKNYWRTRVQ+ AK L  D NS 
Sbjct: 81  RGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 140

Query: 142 EFKDIINRFWIPRLVQQIHEESSNS-SPSSSSSSSSPQ 179
           +FKD +   W+PRLV++I   S  S S SS  ++SS Q
Sbjct: 141 QFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTSSDQ 178

The following BLAST results are available for this feature:

BLAST of MS002128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135411.1	1.8e-141	99.20	transcription factor JAMYB-like [Momordica charantia]	[more]
KAG6587655.1	1.0e-91	69.45	Transcription factor MYB2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926469.1	1.0e-91	69.45	transcription factor JAMYB-like [Cucurbita moschata]	[more]
XP_023531056.1	8.6e-91	69.34	transcription factor JAMYB-like [Cucurbita pepo subsp. pepo]	[more]
XP_038901337.1	1.4e-88	67.42	transcription factor MYB62-like [Benincasa hispida]	[more]

BLAST of MS002128 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10MB4	2.5e-56	61.73	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
Q2QZJ8	2.7e-55	51.29	Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=...	[more]
Q9C9G7	7.9e-55	61.64	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]
Q9LDE1	5.1e-54	61.29	Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1	[more]
Q9FGY3	9.7e-53	63.92	Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1	[more]

BLAST of MS002128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0P4	8.9e-142	99.20	transcription factor JAMYB-like OS=Momordica charantia OX=3673 GN=LOC111007370 P...	[more]
A0A6J1EF71	4.9e-92	69.45	transcription factor JAMYB-like OS=Cucurbita moschata OX=3662 GN=LOC111433607 PE...	[more]
A0A6J1I942	1.1e-86	65.84	transcription factor MYB62-like OS=Cucurbita maxima OX=3661 GN=LOC111472194 PE=4...	[more]
A0A5D3DYB4	1.8e-86	66.28	Transcription factor MYB24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BWZ6	1.8e-86	66.28	transcription factor MYB24-like OS=Cucumis melo OX=3656 GN=LOC103494131 PE=4 SV=...	[more]

BLAST of MS002128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68320.1	5.6e-56	61.64	myb domain protein 62	[more]
AT1G25340.1	1.6e-55	62.66	myb domain protein 116	[more]
AT1G48000.1	3.6e-55	50.00	myb domain protein 112	[more]
AT3G06490.1	3.6e-55	61.29	myb domain protein 108	[more]
AT5G49620.1	6.9e-54	63.92	myb domain protein 78	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 81..129 e-value: 9.9E-12 score: 55.0 coord: 28..78 e-value: 2.8E-14 score: 63.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 77..127 score: 9.10553
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 24..76 score: 11.102862
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 86..125 e-value: 3.52291E-8 score: 46.7998
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 31..76 e-value: 8.26762E-10 score: 51.037
None	No IPR available	GENE3D	1.10.10.60		coord: 86..127 e-value: 1.8E-16 score: 61.8
None	No IPR available	GENE3D	1.10.10.60		coord: 21..82 e-value: 1.9E-16 score: 61.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..203
None	No IPR available	PANTHER	PTHR45675:SF75	TRANSCRIPTION FACTOR MYB21-LIKE	coord: 10..180
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 82..125 e-value: 7.6E-12 score: 45.2 coord: 29..76 e-value: 7.3E-13 score: 48.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 27..80 score: 22.409468
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 81..131 score: 18.761471
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 10..180
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 26..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002128.1	MS002128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding