MS002119 (gene) Bitter gourd (TR) v1

Overview


Name	MS002119
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LOB domain-containing protein
Location	scaffold30: 2490989 .. 2491814 (-)
RNA-Seq Expression	MS002119
Synteny	MS002119

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCATGAGCTGTAATGGATGCCGAGTTCTCCGCAAAGGCTGCTCTCAGAGCTGCTCCATTAGACCCTGCCTTCACTGGATCAAAACCCCACAATCCCAAGCCAACGCCACCTTCTTCCTCGCAAAATTCTACGGCCGCGCCGGCCTCGTCAACCTCATCAATGCCGGCCCCGACCATCTCCGACCAGGTTCATCTCATCTCCTCTGTTTTTATTTTTCATTGCTCTGTTCTTGTGCTGATTTTTTTTTTCTCTTTTCCAGCTATTTTTAAATCTTTGCTGTTCGAGGCGTGTGGTCGGATTGTGAACCCGATTTTCGGGTCGGCCGGATTGCTGTGGTCCGGGAGCTGGCAGCTCTGCCAGGATGCCGTGGAGGCTGTTCTGAAAGGCGCGCCGATTCTCCCGGTTTCTTCCGAAACGGCGGCGTCGCACATGGGACCACCGTTGAAGGGCTGCGACATCCGCCACGTGTCAAAAAACCAGGGCTCGGCCGCTTCCGCCCTCCGGAAAATCAAGACGCGGCGGCGTTTCAAGCGCGCGGCGGCGGCGGCCACCAAGACGAAGCCGAAGGAGGAGCCGTCGGTGATCGAGTTCGGATTCGACGACCCGACCCGGATGGTAGCGGAGCCCCGAGGTTTGAAGTTGGAGGTTGAAAATTGGGGGGGGCGTGAGTCGGAGCTGAGTCAGCGGTCGGATAAGGACTGCGGCAGCGACGACGCCGCCGAGTGCTTGTCGGTGGAGACTGTGGACGCTTCTTCGGTGGGCCAGGGTGATGACGTGGAGTTGGAACTTACGTTGGGGCTTGGGTACAGTCGGATGCTGACG

mRNA sequence

ATGCGCATGAGCTGTAATGGATGCCGAGTTCTCCGCAAAGGCTGCTCTCAGAGCTGCTCCATTAGACCCTGCCTTCACTGGATCAAAACCCCACAATCCCAAGCCAACGCCACCTTCTTCCTCGCAAAATTCTACGGCCGCGCCGGCCTCGTCAACCTCATCAATGCCGGCCCCGACCATCTCCGACCAGCTATTTTTAAATCTTTGCTGTTCGAGGCGTGTGGTCGGATTGTGAACCCGATTTTCGGGTCGGCCGGATTGCTGTGGTCCGGGAGCTGGCAGCTCTGCCAGGATGCCGTGGAGGCTGTTCTGAAAGGCGCGCCGATTCTCCCGGTTTCTTCCGAAACGGCGGCGTCGCACATGGGACCACCGTTGAAGGGCTGCGACATCCGCCACGTGTCAAAAAACCAGGGCTCGGCCGCTTCCGCCCTCCGGAAAATCAAGACGCGGCGGCGTTTCAAGCGCGCGGCGGCGGCGGCCACCAAGACGAAGCCGAAGGAGGAGCCGTCGGTGATCGAGTTCGGATTCGACGACCCGACCCGGATGGTAGCGGAGCCCCGAGGTTTGAAGTTGGAGGTTGAAAATTGGGGGGGGCGTGAGTCGGAGCTGAGTCAGCGGTCGGATAAGGACTGCGGCAGCGACGACGCCGCCGAGTGCTTGTCGGTGGAGACTGTGGACGCTTCTTCGGTGGGCCAGGGTGATGACGTGGAGTTGGAACTTACGTTGGGGCTTGGGTACAGTCGGATGCTGACG

Coding sequence (CDS)

ATGCGCATGAGCTGTAATGGATGCCGAGTTCTCCGCAAAGGCTGCTCTCAGAGCTGCTCCATTAGACCCTGCCTTCACTGGATCAAAACCCCACAATCCCAAGCCAACGCCACCTTCTTCCTCGCAAAATTCTACGGCCGCGCCGGCCTCGTCAACCTCATCAATGCCGGCCCCGACCATCTCCGACCAGCTATTTTTAAATCTTTGCTGTTCGAGGCGTGTGGTCGGATTGTGAACCCGATTTTCGGGTCGGCCGGATTGCTGTGGTCCGGGAGCTGGCAGCTCTGCCAGGATGCCGTGGAGGCTGTTCTGAAAGGCGCGCCGATTCTCCCGGTTTCTTCCGAAACGGCGGCGTCGCACATGGGACCACCGTTGAAGGGCTGCGACATCCGCCACGTGTCAAAAAACCAGGGCTCGGCCGCTTCCGCCCTCCGGAAAATCAAGACGCGGCGGCGTTTCAAGCGCGCGGCGGCGGCGGCCACCAAGACGAAGCCGAAGGAGGAGCCGTCGGTGATCGAGTTCGGATTCGACGACCCGACCCGGATGGTAGCGGAGCCCCGAGGTTTGAAGTTGGAGGTTGAAAATTGGGGGGGGCGTGAGTCGGAGCTGAGTCAGCGGTCGGATAAGGACTGCGGCAGCGACGACGCCGCCGAGTGCTTGTCGGTGGAGACTGTGGACGCTTCTTCGGTGGGCCAGGGTGATGACGTGGAGTTGGAACTTACGTTGGGGCTTGGGTACAGTCGGATGCTGACG

Protein sequence

MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKNQGSAASALRKIKTRRRFKRAAAAATKTKPKEEPSVIEFGFDDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDVELELTLGLGYSRMLT

Homology

[Close]

BLAST of MS002119 vs. NCBI nr
Match: XP_038898929.1 (LOB domain-containing protein 41-like [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-111
Identity = 214/254 (84.25%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS++CSIRPCL WIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSEACSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI--EFGFD 180
           MGPPLKGCDIRHVSK QGSA+ SALRKIKTRRRFKR+AA   K KPK+EP V+  EF FD
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASDSALRKIKTRRRFKRSAA---KLKPKQEPVVVVPEFKFD 180

Query: 181 DPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDVE 240
           DPTR V+EPR LK E++NW  RES      +KDCGSDD  ECLSVETV+AS VGQG DVE
Sbjct: 181 DPTRTVSEPRCLKFELDNWESRES-----PEKDCGSDD-TECLSVETVEASPVGQGGDVE 240

Query: 241 LELTLGLGYSRMLT 252
           LELTLG G+SRMLT
Sbjct: 241 LELTLGFGHSRMLT 245

[Close]

BLAST of MS002119 vs. NCBI nr
Match: XP_008453391.1 (PREDICTED: LOB domain-containing protein 41-like [Cucumis melo] >KAA0058073.1 LOB domain-containing protein 41-like [Cucumis melo var. makuwa] >TYK28425.1 LOB domain-containing protein 41-like [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105
Identity = 208/255 (81.57%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+SCSIRPCL WIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKNQGSA-ASALRKIKTRRRFKRAAAAATKTKPKEEPSVI---EFGF 180
           MGPPLKGCDIRHVSK QGSA ASA+RKIKTRRRFKR +  A K KPKEEP V+   EF F
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKR-SGTANKLKPKEEPGVVAVPEFIF 180

Query: 181 DDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDV 240
           DD TR+V+EPR LK E++NW G E       +K+CGSDD  ECLSVETV+     QG DV
Sbjct: 181 DDQTRIVSEPRCLKFELDNWKGGE-----WPEKECGSDD-TECLSVETVEGC---QGGDV 240

Query: 241 ELELTLGLGYSRMLT 252
           ELELTLG G SRMLT
Sbjct: 241 ELELTLGFGQSRMLT 245

[Close]

BLAST of MS002119 vs. NCBI nr
Match: XP_004138241.2 (LOB domain-containing protein 41 [Cucumis sativus] >KGN63823.2 hypothetical protein Csa_013440 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 2.7e-105
Identity = 207/255 (81.18%), Postives = 221/255 (86.67%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+SCSIRPCL WIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 79  MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 138

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH
Sbjct: 139 LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 198

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI---EFGF 180
           MGPPLKGCDIRHVSK Q SA+ SA+RKIKTRRRFKR+  A  K KPKEEPSV+   EF F
Sbjct: 199 MGPPLKGCDIRHVSKQQDSASGSAVRKIKTRRRFKRSGTA--KLKPKEEPSVVVVPEFKF 258

Query: 181 DDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDV 240
           DD T++V+EP+ LK E++NW GRES      +KDCGSDD  ECLSVETV+     QG DV
Sbjct: 259 DDQTQIVSEPQCLKFELDNWKGRES-----PEKDCGSDD-TECLSVETVEGC---QGGDV 318

Query: 241 ELELTLGLGYSRMLT 252
           ELELTLG G S MLT
Sbjct: 319 ELELTLGFGQSWMLT 322

[Close]

BLAST of MS002119 vs. NCBI nr
Match: KAG6587647.1 (LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 376.3 bits (965), Expect = 2.0e-100
Identity = 199/248 (80.24%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCS+SCSIRPCL WIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI-EFGFDD 180
           MGPPLKGCDIRHVSK QG+A  SALRKIKTRRRFKR  +A  K  PKEEP V+ EF FDD
Sbjct: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKR--SAPNKPMPKEEPVVVNEFVFDD 180

Query: 181 PTRMVAEPRGLKLEVENWGGRESELSQRSDKDC--GSDDAAECLSVETVDASSVGQGDDV 240
           PTR+V+EPR LK E+++W G +S      +KDC  GS D AECLSVE    S+VGQG DV
Sbjct: 181 PTRVVSEPRCLKFELDSWVGHKS-----LEKDCSSGSSDEAECLSVE---GSAVGQGGDV 238

Query: 241 ELELTLGL 245
           ELEL+LGL
Sbjct: 241 ELELSLGL 238

[Close]

BLAST of MS002119 vs. NCBI nr
Match: XP_022933273.1 (LOB domain-containing protein 40-like [Cucurbita moschata])

HSP 1 Score: 375.9 bits (964), Expect = 2.6e-100
Identity = 198/247 (80.16%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCS+SCSIRPCL WIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 67  MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 126

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 127 LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 186

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI-EFGFDD 180
           MGPPLKGCDIRHVSK QG+A  SALRKIKTRRRFKR  +A  K  PKEEP V+ EF FDD
Sbjct: 187 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKR--SAPNKPMPKEEPVVVNEFVFDD 246

Query: 181 PTRMVAEPRGLKLEVENWGGRESELSQRSDKDC-GSDDAAECLSVETVDASSVGQGDDVE 240
           PTR+V+EPR LK E+++W G +S+     +KDC  S D AECLSVE    S+VGQG DVE
Sbjct: 247 PTRVVSEPRCLKFELDSWVGHKSQ-----EKDCSSSSDEAECLSVE---GSAVGQGGDVE 303

Query: 241 LELTLGL 245
           LEL+LGL
Sbjct: 307 LELSLGL 303

[Close]

BLAST of MS002119 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-61
Identity = 119/201 (59.20%), Postives = 148/201 (73.63%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+ CSIRPCL WIK+P++QANAT FLAKFYGRAGL+NLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRP IF+SLL EACGRIVNPI+GS GLLWSG+WQLCQDAVEAV+KG P+  ++++ A   
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 MGPPLKGCDIRHVSKNQGSAASAL----RKIKTRRRFKRAAAAA--TKTKPKEEPSVIEF 180
            GPPLK  DIRH+SK+  SAA+A      K+   RR KR +  A   +++ K + +  + 
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAESEGKSDEASHDS 180

Query: 181 GFDDPTRMVAEPRGLKLEVEN 196
                + +VA   G   E E+
Sbjct: 181 SLSHQSEIVAAHEGESKESES 201

[Close]

BLAST of MS002119 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-56
Identity = 114/226 (50.44%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS++CSIRPCL WIK+ +SQANAT FLAKFYGRAGL+NL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIF+SLL+EACGRIVNPI+GS GLLWSG+W LCQ AVEAV++G+P+ P++ + A + 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 MGPPL--KGCDIRHVSKNQGSAASALRKIKTRRRFKRAAAAATKTKPKEEPSVIEFGFDD 180
             PP   K CDIRHVS    +     R      R  R+ +  +    +   S  E   ++
Sbjct: 121 QAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEE 180

Query: 181 PTRMVAEPRGLKLEVENWGGR-ESELSQRSDKDCGSDDAAECLSVE 224
           P   +     L LE    G      + +R  + CG+ +  +   +E
Sbjct: 181 PKTWIGLELTLGLEPLARGNHVVVPMKKRKLERCGTSEDEDTCKIE 226

[Close]

BLAST of MS002119 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.4e-51
Identity = 121/251 (48.21%), Postives = 153/251 (60.96%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGC+Q C+IRPCL WIK+  SQANAT FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPI--LPVSSETAA 120
           LRPAIF+SLL+EACGRIVNP+ GS GL+WSG+W  CQ AV+AVL G PI   P+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 SHMGPPLKGCDIRHVSKNQGSAASALRKIKTRRRFKRAAAAATKTKPKEEPSVIEFG--- 180
             + PP +  DIRHV+K+  +   +   + TR     A  + T+T   +  SV + G   
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATR---VNANKSKTQTGRFKRESVNQLGECS 180

Query: 181 ---FDDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQ 240
              +  P+       G    +EN   R      +S  + G DD         VD + VG 
Sbjct: 181 HDMWQLPSSSATHGYG-HFTLENVESRREAPFNQSSPNLGFDD--------QVDINEVG- 233

Query: 241 GDDVELELTLG 244
                LEL LG
Sbjct: 241 -----LELRLG 233

[Close]

BLAST of MS002119 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.0e-39
Identity = 67/110 (60.91%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           MSCNGCRVLRKGCS++C +RPC+ WI+T  +Q +AT F+AKF+GRAGL++ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 113
           PA+F+SLL+EACGR VNP+ G+ G+LW+G+W +CQ AVE VL+G  + P+
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110

[Close]

BLAST of MS002119 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 66/110 (60.00%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           MSCNGCRVLRKGCS++C +RPC+ WI++P++Q +AT F+AKF+GRAGL++ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 113
           PA+F+SLL+EACGR VNP+ G+ GLLW+G+W +CQ AVE VL+G  + P+
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110

[Close]

BLAST of MS002119 vs. ExPASy TrEMBL
Match: A0A5A7UQD2 (LOB domain-containing protein 41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00550 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.9e-106
Identity = 208/255 (81.57%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+SCSIRPCL WIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKNQGSA-ASALRKIKTRRRFKRAAAAATKTKPKEEPSVI---EFGF 180
           MGPPLKGCDIRHVSK QGSA ASA+RKIKTRRRFKR +  A K KPKEEP V+   EF F
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKR-SGTANKLKPKEEPGVVAVPEFIF 180

Query: 181 DDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDV 240
           DD TR+V+EPR LK E++NW G E       +K+CGSDD  ECLSVETV+     QG DV
Sbjct: 181 DDQTRIVSEPRCLKFELDNWKGGE-----WPEKECGSDD-TECLSVETVEGC---QGGDV 240

Query: 241 ELELTLGLGYSRMLT 252
           ELELTLG G SRMLT
Sbjct: 241 ELELTLGFGQSRMLT 245

[Close]

BLAST of MS002119 vs. ExPASy TrEMBL
Match: A0A1S3BXA9 (LOB domain-containing protein 41-like OS=Cucumis melo OX=3656 GN=LOC103494123 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.9e-106
Identity = 208/255 (81.57%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+SCSIRPCL WIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKNQGSA-ASALRKIKTRRRFKRAAAAATKTKPKEEPSVI---EFGF 180
           MGPPLKGCDIRHVSK QGSA ASA+RKIKTRRRFKR +  A K KPKEEP V+   EF F
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKR-SGTANKLKPKEEPGVVAVPEFIF 180

Query: 181 DDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDV 240
           DD TR+V+EPR LK E++NW G E       +K+CGSDD  ECLSVETV+     QG DV
Sbjct: 181 DDQTRIVSEPRCLKFELDNWKGGE-----WPEKECGSDD-TECLSVETVEGC---QGGDV 240

Query: 241 ELELTLGLGYSRMLT 252
           ELELTLG G SRMLT
Sbjct: 241 ELELTLGFGQSRMLT 245

[Close]

BLAST of MS002119 vs. ExPASy TrEMBL
Match: A0A0A0LPS5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023060 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 207/255 (81.18%), Postives = 221/255 (86.67%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+SCSIRPCL WIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI---EFGF 180
           MGPPLKGCDIRHVSK Q SA+ SA+RKIKTRRRFKR+  A  K KPKEEPSV+   EF F
Sbjct: 121 MGPPLKGCDIRHVSKQQDSASGSAVRKIKTRRRFKRSGTA--KLKPKEEPSVVVVPEFKF 180

Query: 181 DDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDV 240
           DD T++V+EP+ LK E++NW GRES      +KDCGSDD  ECLSVETV+     QG DV
Sbjct: 181 DDQTQIVSEPQCLKFELDNWKGRES-----PEKDCGSDD-TECLSVETVEGC---QGGDV 240

Query: 241 ELELTLGLGYSRMLT 252
           ELELTLG G S MLT
Sbjct: 241 ELELTLGFGQSWMLT 244

[Close]

BLAST of MS002119 vs. ExPASy TrEMBL
Match: A0A6J1F4A2 (LOB domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111440342 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.3e-100
Identity = 198/247 (80.16%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCS+SCSIRPCL WIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 67  MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 126

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 127 LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 186

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI-EFGFDD 180
           MGPPLKGCDIRHVSK QG+A  SALRKIKTRRRFKR  +A  K  PKEEP V+ EF FDD
Sbjct: 187 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKR--SAPNKPMPKEEPVVVNEFVFDD 246

Query: 181 PTRMVAEPRGLKLEVENWGGRESELSQRSDKDC-GSDDAAECLSVETVDASSVGQGDDVE 240
           PTR+V+EPR LK E+++W G +S+     +KDC  S D AECLSVE    S+VGQG DVE
Sbjct: 247 PTRVVSEPRCLKFELDSWVGHKSQ-----EKDCSSSSDEAECLSVE---GSAVGQGGDVE 303

Query: 241 LELTLGL 245
           LEL+LGL
Sbjct: 307 LELSLGL 303

[Close]

BLAST of MS002119 vs. ExPASy TrEMBL
Match: A0A6J1L0Y6 (LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111498884 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.7e-98
Identity = 193/246 (78.46%), Postives = 210/246 (85.37%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCS+SCSIRPCL WIKTPQSQANATFFLAKFYGRAGL+NLINAGPDH
Sbjct: 1   MRLSCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLLNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSE+AASH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSESAASH 120

Query: 121 MGPPLKGCDIRHVSKNQGSAA-SALRKIKTRRRFKRAAAAATKTKPKEEPSVI-EFGFDD 180
           MGPPLKGCDIRHVS+ QGSA  SAL+KIKTRRR KR  +A  K  PKEEP V+ EF FDD
Sbjct: 121 MGPPLKGCDIRHVSRQQGSAPDSALQKIKTRRRLKR--SAPNKPMPKEEPVVVTEFAFDD 180

Query: 181 PTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQGDDVEL 240
           PTR+V+EPR L  E+++W G +   SQ  D   GS D AECLSVE    S+V Q  DVEL
Sbjct: 181 PTRIVSEPRCLMFELDSWVGHK---SQEKDGSSGSSDEAECLSVE---GSAVEQVGDVEL 238

Query: 241 ELTLGL 245
           EL+LGL
Sbjct: 241 ELSLGL 238

[Close]

BLAST of MS002119 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62
Identity = 119/201 (59.20%), Postives = 148/201 (73.63%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS+ CSIRPCL WIK+P++QANAT FLAKFYGRAGL+NLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRP IF+SLL EACGRIVNPI+GS GLLWSG+WQLCQDAVEAV+KG P+  ++++ A   
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 MGPPLKGCDIRHVSKNQGSAASAL----RKIKTRRRFKRAAAAA--TKTKPKEEPSVIEF 180
            GPPLK  DIRH+SK+  SAA+A      K+   RR KR +  A   +++ K + +  + 
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAESEGKSDEASHDS 180

Query: 181 GFDDPTRMVAEPRGLKLEVEN 196
                + +VA   G   E E+
Sbjct: 181 SLSHQSEIVAAHEGESKESES 201

[Close]

BLAST of MS002119 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-57
Identity = 114/226 (50.44%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRMSCNGCRVLRKGCS++CSIRPCL WIK+ +SQANAT FLAKFYGRAGL+NL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120
           LRPAIF+SLL+EACGRIVNPI+GS GLLWSG+W LCQ AVEAV++G+P+ P++ + A + 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 MGPPL--KGCDIRHVSKNQGSAASALRKIKTRRRFKRAAAAATKTKPKEEPSVIEFGFDD 180
             PP   K CDIRHVS    +     R      R  R+ +  +    +   S  E   ++
Sbjct: 121 QAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEE 180

Query: 181 PTRMVAEPRGLKLEVENWGGR-ESELSQRSDKDCGSDDAAECLSVE 224
           P   +     L LE    G      + +R  + CG+ +  +   +E
Sbjct: 181 PKTWIGLELTLGLEPLARGNHVVVPMKKRKLERCGTSEDEDTCKIE 226

[Close]

BLAST of MS002119 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-52
Identity = 121/251 (48.21%), Postives = 153/251 (60.96%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGC+Q C+IRPCL WIK+  SQANAT FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPI--LPVSSETAA 120
           LRPAIF+SLL+EACGRIVNP+ GS GL+WSG+W  CQ AV+AVL G PI   P+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 SHMGPPLKGCDIRHVSKNQGSAASALRKIKTRRRFKRAAAAATKTKPKEEPSVIEFG--- 180
             + PP +  DIRHV+K+  +   +   + TR     A  + T+T   +  SV + G   
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATR---VNANKSKTQTGRFKRESVNQLGECS 180

Query: 181 ---FDDPTRMVAEPRGLKLEVENWGGRESELSQRSDKDCGSDDAAECLSVETVDASSVGQ 240
              +  P+       G    +EN   R      +S  + G DD         VD + VG 
Sbjct: 181 HDMWQLPSSSATHGYG-HFTLENVESRREAPFNQSSPNLGFDD--------QVDINEVG- 233

Query: 241 GDDVELELTLG 244
                LEL LG
Sbjct: 241 -----LELRLG 233

[Close]

BLAST of MS002119 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-40
Identity = 67/110 (60.91%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           MSCNGCRVLRKGCS++C +RPC+ WI+T  +Q +AT F+AKF+GRAGL++ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 113
           PA+F+SLL+EACGR VNP+ G+ G+LW+G+W +CQ AVE VL+G  + P+
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110

[Close]

BLAST of MS002119 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 66/110 (60.00%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSQSCSIRPCLHWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           MSCNGCRVLRKGCS++C +RPC+ WI++P++Q +AT F+AKF+GRAGL++ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 113
           PA+F+SLL+EACGR VNP+ G+ GLLW+G+W +CQ AVE VL+G  + P+
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110

The following BLAST results are available for this feature:

BLAST of MS002119 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898929.1	2.0e-111	84.25	LOB domain-containing protein 41-like [Benincasa hispida]	[more]
XP_008453391.1	1.2e-105	81.57	PREDICTED: LOB domain-containing protein 41-like [Cucumis melo] >KAA0058073.1 LO...	[more]
XP_004138241.2	2.7e-105	81.18	LOB domain-containing protein 41 [Cucumis sativus] >KGN63823.2 hypothetical prot...	[more]
KAG6587647.1	2.0e-100	80.24	LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022933273.1	2.6e-100	80.16	LOB domain-containing protein 40-like [Cucurbita moschata]	[more]

BLAST of MS002119 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M886	1.9e-61	59.20	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]
Q9ZW96	4.1e-56	50.44	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	2.4e-51	48.21	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]
Q9FN11	6.0e-39	60.91	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9SN23	1.8e-38	60.00	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]

BLAST of MS002119 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQD2	5.9e-106	81.57	LOB domain-containing protein 41-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BXA9	5.9e-106	81.57	LOB domain-containing protein 41-like OS=Cucumis melo OX=3656 GN=LOC103494123 PE...	[more]
A0A0A0LPS5	1.3e-105	81.18	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023060 PE=3 SV...	[more]
A0A6J1F4A2	1.3e-100	80.16	LOB domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111440...	[more]
A0A6J1L0Y6	2.7e-98	78.46	LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC11149888...	[more]

BLAST of MS002119 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02550.1	1.4e-62	59.20	LOB domain-containing protein 41	[more]
AT1G67100.1	2.9e-57	50.44	LOB domain-containing protein 40	[more]
AT1G68510.1	1.7e-52	48.21	LOB domain-containing protein 42	[more]
AT5G67420.1	4.3e-40	60.91	LOB domain-containing protein 37	[more]
AT3G49940.1	1.2e-39	60.00	LOB domain-containing protein 38	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 4..102 e-value: 6.2E-22 score: 78.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..109 score: 15.859503
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..244
None	No IPR available	PANTHER	PTHR31304:SF9	LOB DOMAIN-CONTAINING PROTEIN 40	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002119.1	MS002119.1	mRNA