MS002118 (gene) Bitter gourd (TR) v1

Overview


Name	MS002118
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger protein CONSTANS-LIKE 16
Location	scaffold30: 2486477 .. 2488410 (+)
RNA-Seq Expression	MS002118
Synteny	MS002118

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGCGGGAGGGCGGGCGGCGCGTGTATGCGACAGCTGCATGTCCAAAAGGGCGCGTTGGTTTTGCGCTGCCGACGACGCCTTCCTCTGCCAGTCCTGCGACGTGTCGGTCCACTCAGCCAATCAGCTGGCCAGACGACACGACCGGATCCGCCTAGAAACGGCGTCGTTCAAGTCGCAATCCCAGCTCCCTCCATGGCCCAAAGGCTTCACTCGCAAGGCCAGAACTCCGCGACCCACCAAACAAAAAGCCTCCGTTTTTTCTCTCGTCCCGGAGATTGGAAACGACGACGACGGATTATTGCTGGATTTTAACGAAGAAGAAAACCCCCAATTTGTTCATCATCATCATCAGGTTCCCGTATTTGACCCCTTGATTGAGGAGGAGAATTTTTTGCTAACCGAGGAATTGGAGGATTTTGGAGATGGGTTTCTGCCGTCGGAGGTGGATCTTGCGGAATTTGTAGCGGATGTGGAGAATTTACTCGAAACACAGCAAGAGGAACAAGAAAGGCTACTACGCAAAGTTAAAGATGAAGAGCAAGAGGAAAATGGTGTCAAAATTAATGGATTTTTGGGTTGGAATTTTAAAGGGGAGGAAGTTGAGGAGGATCAAGAGAATAAGATGGTGCCAATGGTGGAAGATGAAGAGGAATTATTGAAGAAAATTAAGAAGAAGAAGAAGAAGACGAACATATTTTTGAGGCTAAATTATGATGCGGTTATTATGGCTTGGGATGCACAATCTTCTCCATACACCACTGGAAATCGGCCTGAATTCGATCTCGATGAATGCTGGGTATAAATTCTATCATTTTTTTTTCCTTTTAAAAGTATTTTCTTGATTATAATTTTGTTGGTGAATTCGCTATATGGTGTGATCATTGATCATGAAGTTTAACATTTTGTAAAAATGTATTAGATGGGAAGGAAAAAGTTTTGTAATTAATATTTCATGGGAAGTCTTTTCAAGTCTCAGAATTGGAAGAAAACAAAAGAACTTCTGACAATAGGGCAACCTTTTTGTTATATAGTACTACCATATACAAAAATTATAATTCTTTTTAGTTCTCTTTTAAATCGCTTTGATTATATGGTCTTCTCCATTTTTTGCTAACCCACCTTCTCAAACTTGATTAAATTTCATAAAATAGAAGTTTATAGACAAATTAAAACAATGGTTATCTGTTAATATATATATATAGTGCAATAGAAATTTTGATACCATCTATTCAACCTGTAATTGAAAGGGTAAGTTGATAGGGTAAGTTGATAGATAACAACAATAAATTTAAGAGATAAAGAGATGTAGATAGTATAAAATAAATACGTATTTTTAAAATATAATAATTCACCTTAGAGTTAAATTGGTAATCAAAGTATGAATAGTTCACCTATTTGATCCCATTTGAAATGAGAGTAGTAGTTAGGTATATCAATGAGAGTAGTAATTAGGTATATTATTAAATATATGTTAGGTTTAGGTTTTTTAGTTTAAAGTGGGATTCTCTCAACATGTTCGATGATTTTCTTTTTTTAGTAATCTTGAATTCATTATCATTTTTATTTATTTAAATTTGTTAAACTAGGATACCATATGAATATTCATAGAGTAACTAATTAGTAGAAAGAGGTAGACTATATATATTACAAACCTTTGTTAAGGAGGGCGTTTTTTAAAAGTTATATATTAAATTTATGCTATGGAGTGAAATTTCGATAAATTTTCAACAGCTAGGATGGAGCCGGGCTGGAGCGTCCGGAGGAAGAGGAGAATGGAAAGCCGACGGGGAAAGAGAAGCAAGAGTTTCGAGATACAGAGAAAAGCGAAGAACAAGGCTGTTTTCGAAGAAAATAAGGTACCAGGTAAGGAAACTGAACGCAGAGAAGAGACCAAGAATGAAAGGTAGATTTGTGAAGAGAACAGTGCCGCCA

mRNA sequence

GCGGCGGGAGGGCGGGCGGCGCGTGTATGCGACAGCTGCATGTCCAAAAGGGCGCGTTGGTTTTGCGCTGCCGACGACGCCTTCCTCTGCCAGTCCTGCGACGTGTCGGTCCACTCAGCCAATCAGCTGGCCAGACGACACGACCGGATCCGCCTAGAAACGGCGTCGTTCAAGTCGCAATCCCAGCTCCCTCCATGGCCCAAAGGCTTCACTCGCAAGGCCAGAACTCCGCGACCCACCAAACAAAAAGCCTCCGTTTTTTCTCTCGTCCCGGAGATTGGAAACGACGACGACGGATTATTGCTGGATTTTAACGAAGAAGAAAACCCCCAATTTGTTCATCATCATCATCAGGTTCCCGTATTTGACCCCTTGATTGAGGAGGAGAATTTTTTGCTAACCGAGGAATTGGAGGATTTTGGAGATGGGTTTCTGCCGTCGGAGGTGGATCTTGCGGAATTTGTAGCGGATGTGGAGAATTTACTCGAAACACAGCAAGAGGAACAAGAAAGGCTACTACGCAAAGTTAAAGATGAAGAGCAAGAGGAAAATGGTGTCAAAATTAATGGATTTTTGGGTTGGAATTTTAAAGGGGAGGAAGTTGAGGAGGATCAAGAGAATAAGATGGTGCCAATGGTGGAAGATGAAGAGGAATTATTGAAGAAAATTAAGAAGAAGAAGAAGAAGACGAACATATTTTTGAGGCTAAATTATGATGCGGTTATTATGGCTTGGGATGCACAATCTTCTCCATACACCACTGGAAATCGGCCTGAATTCGATCTCGATGAATGCTGGCTAGGATGGAGCCGGGCTGGAGCGTCCGGAGGAAGAGGAGAATGGAAAGCCGACGGGGAAAGAGAAGCAAGAGTTTCGAGATACAGAGAAAAGCGAAGAACAAGGCTGTTTTCGAAGAAAATAAGGTACCAGGTAAGGAAACTGAACGCAGAGAAGAGACCAAGAATGAAAGGTAGATTTGTGAAGAGAACAGTGCCGCCA

Coding sequence (CDS)

GCGGCGGGAGGGCGGGCGGCGCGTGTATGCGACAGCTGCATGTCCAAAAGGGCGCGTTGGTTTTGCGCTGCCGACGACGCCTTCCTCTGCCAGTCCTGCGACGTGTCGGTCCACTCAGCCAATCAGCTGGCCAGACGACACGACCGGATCCGCCTAGAAACGGCGTCGTTCAAGTCGCAATCCCAGCTCCCTCCATGGCCCAAAGGCTTCACTCGCAAGGCCAGAACTCCGCGACCCACCAAACAAAAAGCCTCCGTTTTTTCTCTCGTCCCGGAGATTGGAAACGACGACGACGGATTATTGCTGGATTTTAACGAAGAAGAAAACCCCCAATTTGTTCATCATCATCATCAGGTTCCCGTATTTGACCCCTTGATTGAGGAGGAGAATTTTTTGCTAACCGAGGAATTGGAGGATTTTGGAGATGGGTTTCTGCCGTCGGAGGTGGATCTTGCGGAATTTGTAGCGGATGTGGAGAATTTACTCGAAACACAGCAAGAGGAACAAGAAAGGCTACTACGCAAAGTTAAAGATGAAGAGCAAGAGGAAAATGGTGTCAAAATTAATGGATTTTTGGGTTGGAATTTTAAAGGGGAGGAAGTTGAGGAGGATCAAGAGAATAAGATGGTGCCAATGGTGGAAGATGAAGAGGAATTATTGAAGAAAATTAAGAAGAAGAAGAAGAAGACGAACATATTTTTGAGGCTAAATTATGATGCGGTTATTATGGCTTGGGATGCACAATCTTCTCCATACACCACTGGAAATCGGCCTGAATTCGATCTCGATGAATGCTGGCTAGGATGGAGCCGGGCTGGAGCGTCCGGAGGAAGAGGAGAATGGAAAGCCGACGGGGAAAGAGAAGCAAGAGTTTCGAGATACAGAGAAAAGCGAAGAACAAGGCTGTTTTCGAAGAAAATAAGGTACCAGGTAAGGAAACTGAACGCAGAGAAGAGACCAAGAATGAAAGGTAGATTTGTGAAGAGAACAGTGCCGCCA

Protein sequence

AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQSQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGEWKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP

Homology

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BLAST of MS002118 vs. NCBI nr
Match: XP_022134703.1 (zinc finger protein CONSTANS-LIKE 16 [Momordica charantia])

HSP 1 Score: 648.3 bits (1671), Expect = 3.7e-182
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQ 60
           AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETA FKSQ
Sbjct: 12  AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETAXFKSQ 71

Query: 61  SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP 120
           SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP
Sbjct: 72  SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP 131

Query: 121 VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 180
           VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE
Sbjct: 132 VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 191

Query: 181 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKI--KKKKKKTNIFLRLNY 240
           QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKI  KKKKKKTNIFLRLNY
Sbjct: 192 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKKKTNIFLRLNY 251

Query: 241 DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGEWKADGEREARVSRYREKR 300
           DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWS AGASGGRGEWKADGEREARVSRYREKR
Sbjct: 252 DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSWAGASGGRGEWKADGEREARVSRYREKR 311

Query: 301 RTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
           RTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT PP
Sbjct: 312 RTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTAPP 346

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BLAST of MS002118 vs. NCBI nr
Match: KAG6589549.1 (Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438.3 bits (1126), Expect = 5.8e-119
Identity = 244/355 (68.73%), Postives = 273/355 (76.90%), Query Frame = 0


Query: 4   GRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFK----- 63
           GR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLETAS K     
Sbjct: 19  GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQA 78

Query: 64  ---SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEIGNDDDGLLLDFNEEENPQ 123
              SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI N D+G  +D NE+E+ Q
Sbjct: 79  QAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISN-DEGFSIDDNEDEHRQ 138

Query: 124 FVHHHH--QVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQ 183
           F HHHH  QVPVFDPL ++E F LT EL+DFGDGFLPSEVDLAEFVADVENLL  Q++EQ
Sbjct: 139 FHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVADVENLLVRQEQEQ 198

Query: 184 ER-----------LLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEE 243
           E+            + KVKDE++EE  +       WNFKGEE+EE++ NK+   V+  E+
Sbjct: 199 EQEQEQEQEHNRTTILKVKDEKEEEEEL----VQDWNFKGEEIEEEEMNKVEDEVKAFEQ 258

Query: 244 LLKKIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGR 303
            L K+KKK KK NIFLRLNYDA+I AWD QSSPYTTG+RPEFDLD+CW        +G R
Sbjct: 259 EL-KVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEFDLDDCWEEEWGLHENGER 318

Query: 304 GEWKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
           G W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT  P
Sbjct: 319 GGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTATP 367

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BLAST of MS002118 vs. NCBI nr
Match: XP_022921599.1 (zinc finger protein CONSTANS-LIKE 6 [Cucurbita moschata])

HSP 1 Score: 437.6 bits (1124), Expect = 9.8e-119
Identity = 243/353 (68.84%), Postives = 273/353 (77.34%), Query Frame = 0


Query: 4   GRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFK----- 63
           GR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLETAS K     
Sbjct: 19  GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQA 78

Query: 64  ---SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEIGNDDDGLLLDFNEEENPQ 123
              SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI N D+G  +D NE+E+ Q
Sbjct: 79  QAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISN-DEGFSIDDNEDEHRQ 138

Query: 124 FVHHHH--QVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQ 183
           F HHHH  QVPVFDPL ++E F LT EL+DFGDGFLPSEVDLAEFVADVENLL  Q++EQ
Sbjct: 139 FHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVADVENLLVRQEQEQ 198

Query: 184 ER---------LLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELL 243
           E+          + KVKDE++EE  +       WNFKGEE+EE++ NK+   V+  E+ L
Sbjct: 199 EQKQKQEHDRTTILKVKDEKEEEEEL----VQDWNFKGEEIEEEEINKVEDEVKAFEQEL 258

Query: 244 KKIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGE 303
            K+KKK KK NIFLRLNYDA+I AWD QSSPYTTG+RPE+DLD+CW        +G RG 
Sbjct: 259 -KVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHENGERGG 318

Query: 304 WKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
           W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT  P
Sbjct: 319 WRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTATP 365

[Close]

BLAST of MS002118 vs. NCBI nr
Match: XP_022987355.1 (zinc finger protein CONSTANS-LIKE 16 [Cucurbita maxima])

HSP 1 Score: 437.6 bits (1124), Expect = 9.8e-119
Identity = 244/357 (68.35%), Postives = 274/357 (76.75%), Query Frame = 0


Query: 3   GGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFK---- 62
           GGR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLETAS K    
Sbjct: 18  GGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQ 77

Query: 63  ----SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEIGNDDDGLLLDFNEEENP 122
               SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI N D+G  +D NE+E+ 
Sbjct: 78  GQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISN-DEGFSIDDNEDEHR 137

Query: 123 QFVHHHHQVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQE 182
           QF HHH QVPVFDPL + E F LT EL+DFGDGFLPSEVDLAEFVADVE+LL  Q++EQE
Sbjct: 138 QFHHHHQQVPVFDPLFDNEKFSLTHELDDFGDGFLPSEVDLAEFVADVESLLVRQEQEQE 197

Query: 183 R-----------LLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEEL 242
           +            + KVKDEE+EE  V+      WNFKGEE+EE++ NK    VEDE ++
Sbjct: 198 QEQEQEEQYDRTTIVKVKDEEEEEELVQ-----DWNFKGEEIEEEEINK----VEDEVKV 257

Query: 243 LK---KIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASG 302
            +   K+KKK KK NIFLRLNYDA+I AWD +SSPYTTG+RPEFDLD+CW        +G
Sbjct: 258 FEQELKVKKKIKKKNIFLRLNYDAIITAWDTRSSPYTTGDRPEFDLDDCWEEEWGVHENG 317

Query: 303 GRGEWKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
            +G W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT  P
Sbjct: 318 EKGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTPTP 364

[Close]

BLAST of MS002118 vs. NCBI nr
Match: KAG7023236.1 (Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.0 bits (1112), Expect = 2.4e-117
Identity = 242/359 (67.41%), Postives = 270/359 (75.21%), Query Frame = 0


Query: 4   GRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFK----- 63
           GR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLETAS K     
Sbjct: 19  GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQA 78

Query: 64  -------SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEIGNDDDGLLLDFNEE 123
                  SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI N D+G  +D NE+
Sbjct: 79  QAQAQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISN-DEGFSIDDNED 138

Query: 124 ENPQFVHHHH--QVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLL--- 183
           E+ QF HHHH  QVPVFDPL ++E F LT EL+DFGDGFLPSEVDLAEFVADVENLL   
Sbjct: 139 EHRQFHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVADVENLLVRQ 198

Query: 184 --------ETQQEEQERLLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVE 243
                   E +QE     + KVKDE++EE  +       WNFKGEE+EE++ NK+   V+
Sbjct: 199 GQGQGQEQEQEQEHDRTTILKVKDEKEEEEEL----VQDWNFKGEEIEEEEMNKVEDEVK 258

Query: 244 DEEELLKKIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGA 303
             E+ L K+KKK KK NIFLRLNYDA+I AWD QSSPYTTG+RPE+DLD+CW        
Sbjct: 259 AFEQEL-KVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHE 318

Query: 304 SGGRGEWKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
           +G RG W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT  P
Sbjct: 319 NGERGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTATP 371

[Close]

BLAST of MS002118 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 1.3e-60
Identity = 172/403 (42.68%), Postives = 219/403 (54.34%), Query Frame = 0


Query: 1   AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETAS---- 60
           A G + AR CDSC+ +RARW+CAADDAFLCQSCD  VHSAN LARRH+R+RL+TAS    
Sbjct: 8   AVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVV 67

Query: 61  --FKSQSQLPP-----WPKGFTRKARTPRPT--KQKASVF-SLVPEIGNDDDGLLLDFNE 120
                 S  PP     W  GFTRKARTPR +  K  +S+F  LVP+I  +D       N 
Sbjct: 68  KHSNHSSASPPHEVATWHHGFTRKARTPRGSGKKNNSSIFHDLVPDISIEDQ----TDNY 127

Query: 121 EENPQFVHHHHQVPVFDPLIEEE----------------NFLLTEELEDFGD----GFLP 180
           E   Q +    QVPV DPL+ E+                + L+ EE ED  +    GF P
Sbjct: 128 ELEEQLI---CQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFP 187

Query: 181 SEVDLAEFVADVENL----LETQQEEQERL------LRKVKDEEQEENGVKINGF----- 240
           ++++L EF ADVE L    L+T+    E L      + K++ +E EE   +I        
Sbjct: 188 TDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIF 247

Query: 241 ------------LGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYD 300
                          +F  E   +  E +++  VE   E + K+K+++ K  + LRLNYD
Sbjct: 248 DDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLMLRLNYD 307

Query: 301 AVIMAWDAQSSPYTTGNRPEFDLD-ECWLGWSRAGASGGRGEWK------------ADGE 330
           +VI  W  Q  P+++G  PE D+D   W  +S     G     K             DG 
Sbjct: 308 SVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGG 367

[Close]

BLAST of MS002118 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 5.5e-56
Identity = 163/400 (40.75%), Postives = 219/400 (54.75%), Query Frame = 0


Query: 1   AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASF-KS 60
           A GG+ AR CDSC+ +RARW+CAADDAFLC +CD SVHSAN LARRH+R+RL++AS  K 
Sbjct: 8   AVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGKY 67

Query: 61  QSQLPP----WPKGFTRKARTPRPTKQKASV--FSLVPEIGNDDDGLLLDFNEEENPQFV 120
           +   PP    W +GFTRKARTPR  K+  ++    LVPE+  +D      +  EE   F 
Sbjct: 68  RHASPPHQATWHQGFTRKARTPRGGKKSHTMVFHDLVPEMSTEDQA--ESYEVEEQLIF- 127

Query: 121 HHHHQVPVFDPLIEEE-----------------NFLLTEELEDFG-----DGFLPSEVDL 180
               +VPV + ++EE+                 +F  ++E +D       +G  P++++L
Sbjct: 128 ----EVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMEL 187

Query: 181 AEFVADVENLLETQQEEQERL-------LRKVKDEEQEENGV-----------------K 240
           A+F ADVE LL     E   +       + K++ EE EE GV                 +
Sbjct: 188 AQFTADVETLLGGGDREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSPFE 247

Query: 241 INGFLGWNFKG--EEVEEDQENKMVPMVED--EEELLKKIKKKKKKTNIFLRLNYDAVIM 300
           I+    +  K   +E EED++  ++  V +    E+   IK++KK+  + LRL+Y++VI 
Sbjct: 248 ISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVIS 307

Query: 301 AWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGEW-------------KADGEREAR 331
            W  Q  P+T     E DLD         G SG                    DG REAR
Sbjct: 308 TWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGREAR 367

[Close]

BLAST of MS002118 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.8e-52
Identity = 162/399 (40.60%), Postives = 212/399 (53.13%), Query Frame = 0


Query: 6   AARVCDSCMSK-RARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETAS--FKSQSQ 65
           AAR CD+CM + RA W+C ADDAFLCQSCD S+HSAN LA+RH+R+RL+++S    +   
Sbjct: 18  AARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKT 77

Query: 66  LPPWPKGFTRKARTPRPTK-------QKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHH 125
              W +GF RKARTPR          Q  S   LVPE+G D+D     F+  E  +    
Sbjct: 78  TSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELGGDEDDGFFSFSSVEETE-ESL 137

Query: 126 HHQVPVFDP----LIEEEN-FLLTEE------------------LEDFG-DGFLPSEVDL 185
           +  VPVFDP    LI++ N F L  +                  ++D G  GF+P ++DL
Sbjct: 138 NCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELGEVEKAIMDDEGFMGFVPLDMDL 197

Query: 186 AEFVADVENLLETQQ--------------EEQERL--------LRKVKDEEQEENGVKIN 245
            +   DVE+LLE +Q              +E+ ++        L++VKDE++EE   K  
Sbjct: 198 EDLTMDVESLLEEEQLCLGFKEPNDVGVIKEENKVGFEINCKDLKRVKDEDEEEEEAKCE 257

Query: 246 GFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYDAVIMAWDAQS 305
                   G   + D+E                   K +KT++FLRL+Y AVI AWD   
Sbjct: 258 -------NGGSKDSDREAS---------------NDKDRKTSLFLRLDYGAVISAWDNHG 317

Query: 306 SPYTTGNRPEFDLDECWLG---------------WSRAGA---SGGRGEWKADGEREARV 331
           SP+ TG +P     EC LG                S  G+     GR    +DGEREARV
Sbjct: 318 SPWKTGIKP-----ECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARV 377

[Close]

BLAST of MS002118 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 3.8e-33
Identity = 119/332 (35.84%), Postives = 167/332 (50.30%), Query Frame = 0


Query: 8   RVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQ-----SQ 67
           R C+ C++K A W+CA+DDAFLC  CD SVHSAN +A +H+R+ L T    +      + 
Sbjct: 19  RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTL 78

Query: 68  LPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVPVF 127
              W  GF RKARTPR   +K       P+   DD+         E+P+      +V  F
Sbjct: 79  TSVWHSGFRRKARTPRSRYEKK------PQQKIDDE------RRREDPRVPEIGGEVMFF 138

Query: 128 DPLIEEENFL-LTEELEDFGD-GFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 187
            P   +++   L  E E F + GF  S  +  E      N  E + +  E L    ++E+
Sbjct: 139 IPEANDDDMTSLVPEFEGFTEMGFFLSNHNGTEETTKQFN-FEEEADTMEDLYYNGEEED 198

Query: 188 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYDA 247
           + +      G    + K     +D +N ++ + E  EE+     +   + N   RLNY+ 
Sbjct: 199 KTDGAEACPGQYLMSCK-----KDYDN-VITVSEKTEEI-----EDCYENNARHRLNYEN 258

Query: 248 VIMAWDAQSSPY-TTGNRPEFDLDECWLGWSRAGASGGRGEWKADGEREARVSRYREKRR 307
           VI AWD Q SP     N   F L              G  E +   EREARV RYR+KR+
Sbjct: 259 VIAAWDKQESPRDVKNNTSSFQL-----------VPPGIEEKRVRSEREARVWRYRDKRK 315

Query: 308 TRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTV 332
            RLF KKIRY+VRK+NA+KRPRMKGRFV+R++
Sbjct: 319 NRLFEKKIRYEVRKVNADKRPRMKGRFVRRSL 315

[Close]

BLAST of MS002118 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.2e-14
Identity = 98/359 (27.30%), Postives = 148/359 (41.23%), Query Frame = 0


Query: 7   ARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRL------ETASFKSQ 66
           AR CD+C S     +C AD A+LC SCD  VHSAN++A RH R+R+        A+F  +
Sbjct: 17  ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCE 76

Query: 67  SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP 126
           +           +  +  P  ++     ++P  GN    +             HH  +  
Sbjct: 77  ADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTT----------THHQSEKT 136

Query: 127 VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 186
           + DP   E+  ++ +E  + GD       ++A ++    N  +    +   LL      +
Sbjct: 137 MTDP---EKRLVVDQEEGEEGD---KDAKEVASWL--FPNSDKNNNNQNNGLL----FSD 196

Query: 187 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKK-------TNIF 246
           +  N V  N  + + F G E  + Q+N  VP      + +  +K ++ +        N  
Sbjct: 197 EYLNLVDYNSSMDYKFTG-EYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQQNFQ 256

Query: 247 LRLNY--------DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGEWKADG 306
             + Y        D   +  +A  S   TG  PE     C    S      G  E + D 
Sbjct: 257 FNIKYGSSGTHYNDNGSINHNAYISSMETGVVPE--STACVTTASHPRTPKGTVEQQPDP 316

Query: 307 -------------EREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTV 332
                        +REARV RYREKR+TR F K IRY  RK  AE RPR+ GRF KR +
Sbjct: 317 ASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREI 350

[Close]

BLAST of MS002118 vs. ExPASy TrEMBL
Match: A0A6J1C2R7 (zinc finger protein CONSTANS-LIKE 16 OS=Momordica charantia OX=3673 GN=LOC111006910 PE=3 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 1.8e-182
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQ 60
           AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETA FKSQ
Sbjct: 12  AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETAXFKSQ 71

Query: 61  SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP 120
           SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP
Sbjct: 72  SQLPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVP 131

Query: 121 VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 180
           VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE
Sbjct: 132 VFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 191

Query: 181 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKI--KKKKKKTNIFLRLNY 240
           QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKI  KKKKKKTNIFLRLNY
Sbjct: 192 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKKKTNIFLRLNY 251

Query: 241 DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGEWKADGEREARVSRYREKR 300
           DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWS AGASGGRGEWKADGEREARVSRYREKR
Sbjct: 252 DAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSWAGASGGRGEWKADGEREARVSRYREKR 311

Query: 301 RTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
           RTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT PP
Sbjct: 312 RTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTAPP 346

[Close]

BLAST of MS002118 vs. ExPASy TrEMBL
Match: A0A6J1JGM2 (zinc finger protein CONSTANS-LIKE 16 OS=Cucurbita maxima OX=3661 GN=LOC111484935 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.7e-119
Identity = 244/357 (68.35%), Postives = 274/357 (76.75%), Query Frame = 0


Query: 3   GGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFK---- 62
           GGR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLETAS K    
Sbjct: 18  GGRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQ 77

Query: 63  ----SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEIGNDDDGLLLDFNEEENP 122
               SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI N D+G  +D NE+E+ 
Sbjct: 78  GQAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISN-DEGFSIDDNEDEHR 137

Query: 123 QFVHHHHQVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQE 182
           QF HHH QVPVFDPL + E F LT EL+DFGDGFLPSEVDLAEFVADVE+LL  Q++EQE
Sbjct: 138 QFHHHHQQVPVFDPLFDNEKFSLTHELDDFGDGFLPSEVDLAEFVADVESLLVRQEQEQE 197

Query: 183 R-----------LLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEEL 242
           +            + KVKDEE+EE  V+      WNFKGEE+EE++ NK    VEDE ++
Sbjct: 198 QEQEQEEQYDRTTIVKVKDEEEEEELVQ-----DWNFKGEEIEEEEINK----VEDEVKV 257

Query: 243 LK---KIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASG 302
            +   K+KKK KK NIFLRLNYDA+I AWD +SSPYTTG+RPEFDLD+CW        +G
Sbjct: 258 FEQELKVKKKIKKKNIFLRLNYDAIITAWDTRSSPYTTGDRPEFDLDDCWEEEWGVHENG 317

Query: 303 GRGEWKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
            +G W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT  P
Sbjct: 318 EKGGWRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTPTP 364

[Close]

BLAST of MS002118 vs. ExPASy TrEMBL
Match: A0A6J1E0Y5 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC111429816 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.7e-119
Identity = 243/353 (68.84%), Postives = 273/353 (77.34%), Query Frame = 0


Query: 4   GRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFK----- 63
           GR ARVCD+C+ KRA WFCAADDAFLCQ+CDVSVHSANQLARRHDRIRLETAS K     
Sbjct: 19  GRTARVCDACLCKRAHWFCAADDAFLCQACDVSVHSANQLARRHDRIRLETASLKSTHQA 78

Query: 64  ---SQSQLPPWPKGFTRKARTPRPTKQ----KASVFSLVPEIGNDDDGLLLDFNEEENPQ 123
              SQ  LPPW KGFTRKARTPRP KQ    KASVFSLVPEI N D+G  +D NE+E+ Q
Sbjct: 79  QAQSQPHLPPWLKGFTRKARTPRPNKQISSTKASVFSLVPEISN-DEGFSIDDNEDEHRQ 138

Query: 124 FVHHHH--QVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQ 183
           F HHHH  QVPVFDPL ++E F LT EL+DFGDGFLPSEVDLAEFVADVENLL  Q++EQ
Sbjct: 139 FHHHHHHQQVPVFDPLFDDEKFSLTHELDDFGDGFLPSEVDLAEFVADVENLLVRQEQEQ 198

Query: 184 ER---------LLRKVKDEEQEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELL 243
           E+          + KVKDE++EE  +       WNFKGEE+EE++ NK+   V+  E+ L
Sbjct: 199 EQKQKQEHDRTTILKVKDEKEEEEEL----VQDWNFKGEEIEEEEINKVEDEVKAFEQEL 258

Query: 244 KKIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGE 303
            K+KKK KK NIFLRLNYDA+I AWD QSSPYTTG+RPE+DLD+CW        +G RG 
Sbjct: 259 -KVKKKIKKKNIFLRLNYDAIITAWDTQSSPYTTGDRPEYDLDDCWEEEWGLHENGERGG 318

Query: 304 WKADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTVPP 334
           W+ DGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRT  P
Sbjct: 319 WRNDGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTATP 365

[Close]

BLAST of MS002118 vs. ExPASy TrEMBL
Match: A0A0A0LSN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023050 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.4e-108
Identity = 231/365 (63.29%), Postives = 267/365 (73.15%), Query Frame = 0


Query: 3   GGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQSQ 62
           GGR ARVCDSC+ KRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLET+SF S   
Sbjct: 9   GGRTARVCDSCLCKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETSSFNSTDH 68

Query: 63  LP--PWPKGFTRKARTPRP-------TKQKASVFSLVPEIGNDDD-GLLLDFNEEENPQF 122
           LP  PW KGFTRKARTPR        +  KASVFS+VPEIGND++ G  +D N++E+ QF
Sbjct: 69  LPPTPWLKGFTRKARTPRSNNNNNKISSSKASVFSIVPEIGNDNELGFSIDENDDEHHQF 128

Query: 123 VHHHHQVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQER- 182
           + H  +VPVFDPL +++  LLT+ELEDFGDGFLPSEVDLAEFVADVENLL  Q +E+++ 
Sbjct: 129 LGHQQEVPVFDPLFDDQKLLLTDELEDFGDGFLPSEVDLAEFVADVENLLGRQDDEEQQQ 188

Query: 183 --------LLRKVKDEEQEENGVKING-----FLGWNFKGEEVEEDQENKMVPMVEDEEE 242
                   ++ KVKDE+  ++ +  N       + W+FK EE+EE          E+EEE
Sbjct: 189 QDHDGNTNIIVKVKDEDLVQDCINKNNNHNGYLMDWDFK-EEIEE----------EEEEE 248

Query: 243 LLKKIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGR 302
           L    K K KK  I LRLNYDAVI AWDAQSSPYTTGNRP+FDLD+CW  WS   + GGR
Sbjct: 249 L----KIKNKKNIISLRLNYDAVITAWDAQSSPYTTGNRPQFDLDDCWEEWSGVCSKGGR 308

Query: 303 G------EWK-------ADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGR 331
                  EW+       ++ EREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGR
Sbjct: 309 NVVVDDQEWRGRNNNGISNEEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGR 358

[Close]

BLAST of MS002118 vs. ExPASy TrEMBL
Match: A0A1S3BWX5 (zinc finger protein CONSTANS-LIKE 16 OS=Cucumis melo OX=3656 GN=LOC103494122 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.4e-108
Identity = 233/362 (64.36%), Postives = 271/362 (74.86%), Query Frame = 0


Query: 3   GGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQS- 62
           GGR ARVCDSC+ KRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLET+SF S + 
Sbjct: 17  GGRTARVCDSCLCKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETSSFNSTTD 76

Query: 63  QLP--PWPKGFTRKARTPRP-----TKQKASVFSLVPEIGNDDD-GLLLDFNEEENPQFV 122
            LP  PW KGFTRKARTPR      +  KASVFS+VPEIGND++ G  +D N++E+ QF+
Sbjct: 77  HLPPTPWLKGFTRKARTPRSNNNKISSSKASVFSIVPEIGNDNELGFSIDENDDEHHQFL 136

Query: 123 HHHHQVPVFDPLIEEENFLLTEELEDFGDGFLPSEVDLAEFVADVENLLETQQEEQER-- 182
            H  +VPVFDPL +++  LLT ELEDFGDGFLPSEVDLAEFVADVENLL  ++EE+++  
Sbjct: 137 GHQQEVPVFDPLFDDQKLLLTHELEDFGDGFLPSEVDLAEFVADVENLLGKEEEEEQQQQ 196

Query: 183 -----LLRKVKDEEQEENGVKING-----FLGWNFKGEEVEEDQENKMVPMVEDEEELLK 242
                ++ KVKDEE  ++ +  N      ++ W+FK EE+EE++        EDEEEL  
Sbjct: 197 HDGNTIIVKVKDEELVQDCINKNNNHNGFWMDWDFK-EEIEEEE--------EDEEEL-- 256

Query: 243 KIKKKKKKTNIFLRLNYDAVIMAWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRG-- 302
             K K KK  I LRLNYDAVI AWDAQSSPYTTGNRP+FDLD+C   WS   + GGR   
Sbjct: 257 --KIKNKKNIISLRLNYDAVITAWDAQSSPYTTGNRPQFDLDDCLEEWSGICSKGGRNVA 316

Query: 303 ----EWK-------ADGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK 331
               EW+       ++GEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK
Sbjct: 317 VDDQEWRRNYNGIISNGEREARVSRYREKRRTRLFSKKIRYQVRKLNAEKRPRMKGRFVK 365

[Close]

BLAST of MS002118 vs. TAIR 10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 235.0 bits (598), Expect = 9.0e-62
Identity = 172/403 (42.68%), Postives = 219/403 (54.34%), Query Frame = 0


Query: 1   AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETAS---- 60
           A G + AR CDSC+ +RARW+CAADDAFLCQSCD  VHSAN LARRH+R+RL+TAS    
Sbjct: 8   AVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVV 67

Query: 61  --FKSQSQLPP-----WPKGFTRKARTPRPT--KQKASVF-SLVPEIGNDDDGLLLDFNE 120
                 S  PP     W  GFTRKARTPR +  K  +S+F  LVP+I  +D       N 
Sbjct: 68  KHSNHSSASPPHEVATWHHGFTRKARTPRGSGKKNNSSIFHDLVPDISIEDQ----TDNY 127

Query: 121 EENPQFVHHHHQVPVFDPLIEEE----------------NFLLTEELEDFGD----GFLP 180
           E   Q +    QVPV DPL+ E+                + L+ EE ED  +    GF P
Sbjct: 128 ELEEQLI---CQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFP 187

Query: 181 SEVDLAEFVADVENL----LETQQEEQERL------LRKVKDEEQEENGVKINGF----- 240
           ++++L EF ADVE L    L+T+    E L      + K++ +E EE   +I        
Sbjct: 188 TDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDEIEEEVEEIKAMSMDIF 247

Query: 241 ------------LGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYD 300
                          +F  E   +  E +++  VE   E + K+K+++ K  + LRLNYD
Sbjct: 248 DDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLMLRLNYD 307

Query: 301 AVIMAWDAQSSPYTTGNRPEFDLD-ECWLGWSRAGASGGRGEWK------------ADGE 330
           +VI  W  Q  P+++G  PE D+D   W  +S     G     K             DG 
Sbjct: 308 SVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGG 367

[Close]

BLAST of MS002118 vs. TAIR 10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 219.5 bits (558), Expect = 3.9e-57
Identity = 163/400 (40.75%), Postives = 219/400 (54.75%), Query Frame = 0


Query: 1   AAGGRAARVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASF-KS 60
           A GG+ AR CDSC+ +RARW+CAADDAFLC +CD SVHSAN LARRH+R+RL++AS  K 
Sbjct: 8   AVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGKY 67

Query: 61  QSQLPP----WPKGFTRKARTPRPTKQKASV--FSLVPEIGNDDDGLLLDFNEEENPQFV 120
           +   PP    W +GFTRKARTPR  K+  ++    LVPE+  +D      +  EE   F 
Sbjct: 68  RHASPPHQATWHQGFTRKARTPRGGKKSHTMVFHDLVPEMSTEDQA--ESYEVEEQLIF- 127

Query: 121 HHHHQVPVFDPLIEEE-----------------NFLLTEELEDFG-----DGFLPSEVDL 180
               +VPV + ++EE+                 +F  ++E +D       +G  P++++L
Sbjct: 128 ----EVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDMEL 187

Query: 181 AEFVADVENLLETQQEEQERL-------LRKVKDEEQEENGV-----------------K 240
           A+F ADVE LL     E   +       + K++ EE EE GV                 +
Sbjct: 188 AQFTADVETLLGGGDREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSPFE 247

Query: 241 INGFLGWNFKG--EEVEEDQENKMVPMVED--EEELLKKIKKKKKKTNIFLRLNYDAVIM 300
           I+    +  K   +E EED++  ++  V +    E+   IK++KK+  + LRL+Y++VI 
Sbjct: 248 ISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVIS 307

Query: 301 AWDAQSSPYTTGNRPEFDLDECWLGWSRAGASGGRGEW-------------KADGEREAR 331
            W  Q  P+T     E DLD         G SG                    DG REAR
Sbjct: 308 TWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGREAR 367

[Close]

BLAST of MS002118 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-53
Identity = 162/399 (40.60%), Postives = 212/399 (53.13%), Query Frame = 0


Query: 6   AARVCDSCMSK-RARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETAS--FKSQSQ 65
           AAR CD+CM + RA W+C ADDAFLCQSCD S+HSAN LA+RH+R+RL+++S    +   
Sbjct: 18  AARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKT 77

Query: 66  LPPWPKGFTRKARTPRPTK-------QKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHH 125
              W +GF RKARTPR          Q  S   LVPE+G D+D     F+  E  +    
Sbjct: 78  TSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELGGDEDDGFFSFSSVEETE-ESL 137

Query: 126 HHQVPVFDP----LIEEEN-FLLTEE------------------LEDFG-DGFLPSEVDL 185
           +  VPVFDP    LI++ N F L  +                  ++D G  GF+P ++DL
Sbjct: 138 NCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELGEVEKAIMDDEGFMGFVPLDMDL 197

Query: 186 AEFVADVENLLETQQ--------------EEQERL--------LRKVKDEEQEENGVKIN 245
            +   DVE+LLE +Q              +E+ ++        L++VKDE++EE   K  
Sbjct: 198 EDLTMDVESLLEEEQLCLGFKEPNDVGVIKEENKVGFEINCKDLKRVKDEDEEEEEAKCE 257

Query: 246 GFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYDAVIMAWDAQS 305
                   G   + D+E                   K +KT++FLRL+Y AVI AWD   
Sbjct: 258 -------NGGSKDSDREAS---------------NDKDRKTSLFLRLDYGAVISAWDNHG 317

Query: 306 SPYTTGNRPEFDLDECWLG---------------WSRAGA---SGGRGEWKADGEREARV 331
           SP+ TG +P     EC LG                S  G+     GR    +DGEREARV
Sbjct: 318 SPWKTGIKP-----ECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARV 377

[Close]

BLAST of MS002118 vs. TAIR 10
Match: AT1G49130.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-34
Identity = 119/332 (35.84%), Postives = 167/332 (50.30%), Query Frame = 0


Query: 8   RVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQ-----SQ 67
           R C+ C++K A W+CA+DDAFLC  CD SVHSAN +A +H+R+ L T    +      + 
Sbjct: 26  RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTL 85

Query: 68  LPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVPVF 127
              W  GF RKARTPR   +K       P+   DD+         E+P+      +V  F
Sbjct: 86  TSVWHSGFRRKARTPRSRYEKK------PQQKIDDE------RRREDPRVPEIGGEVMFF 145

Query: 128 DPLIEEENFL-LTEELEDFGD-GFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 187
            P   +++   L  E E F + GF  S  +  E      N  E + +  E L    ++E+
Sbjct: 146 IPEANDDDMTSLVPEFEGFTEMGFFLSNHNGTEETTKQFN-FEEEADTMEDLYYNGEEED 205

Query: 188 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYDA 247
           + +      G    + K     +D +N ++ + E  EE+     +   + N   RLNY+ 
Sbjct: 206 KTDGAEACPGQYLMSCK-----KDYDN-VITVSEKTEEI-----EDCYENNARHRLNYEN 265

Query: 248 VIMAWDAQSSPY-TTGNRPEFDLDECWLGWSRAGASGGRGEWKADGEREARVSRYREKRR 307
           VI AWD Q SP     N   F L              G  E +   EREARV RYR+KR+
Sbjct: 266 VIAAWDKQESPRDVKNNTSSFQL-----------VPPGIEEKRVRSEREARVWRYRDKRK 322

Query: 308 TRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTV 332
            RLF KKIRY+VRK+NA+KRPRMKGRFV+R++
Sbjct: 326 NRLFEKKIRYEVRKVNADKRPRMKGRFVRRSL 322

[Close]

BLAST of MS002118 vs. TAIR 10
Match: AT1G49130.2 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-34
Identity = 119/332 (35.84%), Postives = 167/332 (50.30%), Query Frame = 0


Query: 8   RVCDSCMSKRARWFCAADDAFLCQSCDVSVHSANQLARRHDRIRLETASFKSQ-----SQ 67
           R C+ C++K A W+CA+DDAFLC  CD SVHSAN +A +H+R+ L T    +      + 
Sbjct: 19  RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTL 78

Query: 68  LPPWPKGFTRKARTPRPTKQKASVFSLVPEIGNDDDGLLLDFNEEENPQFVHHHHQVPVF 127
              W  GF RKARTPR   +K       P+   DD+         E+P+      +V  F
Sbjct: 79  TSVWHSGFRRKARTPRSRYEKK------PQQKIDDE------RRREDPRVPEIGGEVMFF 138

Query: 128 DPLIEEENFL-LTEELEDFGD-GFLPSEVDLAEFVADVENLLETQQEEQERLLRKVKDEE 187
            P   +++   L  E E F + GF  S  +  E      N  E + +  E L    ++E+
Sbjct: 139 IPEANDDDMTSLVPEFEGFTEMGFFLSNHNGTEETTKQFN-FEEEADTMEDLYYNGEEED 198

Query: 188 QEENGVKINGFLGWNFKGEEVEEDQENKMVPMVEDEEELLKKIKKKKKKTNIFLRLNYDA 247
           + +      G    + K     +D +N ++ + E  EE+     +   + N   RLNY+ 
Sbjct: 199 KTDGAEACPGQYLMSCK-----KDYDN-VITVSEKTEEI-----EDCYENNARHRLNYEN 258

Query: 248 VIMAWDAQSSPY-TTGNRPEFDLDECWLGWSRAGASGGRGEWKADGEREARVSRYREKRR 307
           VI AWD Q SP     N   F L              G  E +   EREARV RYR+KR+
Sbjct: 259 VIAAWDKQESPRDVKNNTSSFQL-----------VPPGIEEKRVRSEREARVWRYRDKRK 315

Query: 308 TRLFSKKIRYQVRKLNAEKRPRMKGRFVKRTV 332
            RLF KKIRY+VRK+NA+KRPRMKGRFV+R++
Sbjct: 319 NRLFEKKIRYEVRKVNADKRPRMKGRFVRRSL 315

The following BLAST results are available for this feature:

BLAST of MS002118 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134703.1	3.7e-182	98.51	zinc finger protein CONSTANS-LIKE 16 [Momordica charantia]	[more]
KAG6589549.1	5.8e-119	68.73	Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022921599.1	9.8e-119	68.84	zinc finger protein CONSTANS-LIKE 6 [Cucurbita moschata]	[more]
XP_022987355.1	9.8e-119	68.35	zinc finger protein CONSTANS-LIKE 16 [Cucurbita maxima]	[more]
KAG7023236.1	2.4e-117	67.41	Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of MS002118 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWD0	1.3e-60	42.68	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q8LG76	5.5e-56	40.75	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	4.8e-52	40.60	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q9M9B3	3.8e-33	35.84	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]
Q39057	5.2e-14	27.30	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]

BLAST of MS002118 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2R7	1.8e-182	98.51	zinc finger protein CONSTANS-LIKE 16 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JGM2	4.7e-119	68.35	zinc finger protein CONSTANS-LIKE 16 OS=Cucurbita maxima OX=3661 GN=LOC111484935...	[more]
A0A6J1E0Y5	4.7e-119	68.84	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC11142981...	[more]
A0A0A0LSN3	6.4e-108	63.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023050 PE=3 SV=1	[more]
A0A1S3BWX5	6.4e-108	64.36	zinc finger protein CONSTANS-LIKE 16 OS=Cucumis melo OX=3656 GN=LOC103494122 PE=...	[more]

BLAST of MS002118 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25440.1	9.0e-62	42.68	B-box type zinc finger protein with CCT domain	[more]
AT1G68520.1	3.9e-57	40.75	B-box type zinc finger protein with CCT domain	[more]
AT1G73870.1	3.4e-53	40.60	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.1	2.7e-34	35.84	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.2	2.7e-34	35.84	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..182
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..330
None	No IPR available	PANTHER	PTHR31874:SF43	ZINC FINGER PROTEIN CONSTANS-LIKE 6	coord: 1..330
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 9..52 e-value: 7.444E-20 score: 79.6491
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 5..52 e-value: 9.4E-12 score: 55.1
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 7..50 e-value: 7.2E-9 score: 35.7
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 5..52 score: 11.291277
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 287..329 e-value: 1.2E-17 score: 63.7
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 287..329 score: 16.042917

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002118.1	MS002118.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding