MS002112 (gene) Bitter gourd (TR) v1

Overview
NameMS002112
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAAI domain-containing protein
Locationscaffold30: 2456297 .. 2457102 (+)
RNA-Seq ExpressionMS002112
SyntenyMS002112
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTCTTCCTTCTCTTCCTGCACTCCCCATTTCATACCTAAGCCTGCTCTTTCTTCTACGCATTCTACCGACTACCATATCACAAGGCCCGATCTCCTCGAGCCCTGGCATAGCTCAATGCACGGCGAGCCTTCTTCCATTGGCTTCATGTGCACCGTTTGTGCAGGGTATCGCCTCAGTGCCAGCCATGGCATGCTGTGATAACCTGAAGCAACTTTACACCAATGTCCCTTACTGCCTCTGCCTCTTGCTCAATGGCACTACCTTAAGCTCCTTCCCTTTAAACACTACTAGAGCTCTTCAGCTGCCTGATCTTTGCAGCCTTCAAGTCAACATCTCCACTTGTTCAGGCACAAGTATGTTAAATTTCTTCCACTCTCTACTTCTTAACTTCAATATTTGTGTTTTGAAGAACATCGATATTCGACATTCAACGTTAATAGTTATAATTCTTTGGATGGTCTTTTGAAGCTGTTCTTGTGCCACCTAGTTCACCCAGTTCTCCAGTTTCTCCTAGTGCAAACACCAACTCCACAGTCTCCAATGCTACAGTTTTGGGTATGATTTAGATATTTATCTGATCAAATAAAGTTTTCAATTTGGTTTTATAACGTCAATATCTTATACATTCTGGTACTGCTTATTTTGTGATTTTCAGCTTCTCCAGTGGCTCAACCAGCACCAAAACCGAGCATTCTGGGGTTAGGGATGGGCAGGATTAGTGCTAGTTTCAAACCAAGGATGGCAATTGAGTTCACAATTGCGATTGCTATGAAAACTTTTCTGTTTCTTGTATTGCCT

mRNA sequence

ATGGCATCTCTTCCTTCTCTTCCTGCACTCCCCATTTCATACCTAAGCCTGCTCTTTCTTCTACGCATTCTACCGACTACCATATCACAAGGCCCGATCTCCTCGAGCCCTGGCATAGCTCAATGCACGGCGAGCCTTCTTCCATTGGCTTCATGTGCACCGTTTGTGCAGGGTATCGCCTCAGTGCCAGCCATGGCATGCTGTGATAACCTGAAGCAACTTTACACCAATGTCCCTTACTGCCTCTGCCTCTTGCTCAATGGCACTACCTTAAGCTCCTTCCCTTTAAACACTACTAGAGCTCTTCAGCTGCCTGATCTTTGCAGCCTTCAAGTCAACATCTCCACTTGTTCAGGCACAACTGTTCTTGTGCCACCTAGTTCACCCAGTTCTCCAGTTTCTCCTAGTGCAAACACCAACTCCACAGTCTCCAATGCTACAGTTTTGGCTTCTCCAGTGGCTCAACCAGCACCAAAACCGAGCATTCTGGGGTTAGGGATGGGCAGGATTAGTGCTAGTTTCAAACCAAGGATGGCAATTGAGTTCACAATTGCGATTGCTATGAAAACTTTTCTGTTTCTTGTATTGCCT

Coding sequence (CDS)

ATGGCATCTCTTCCTTCTCTTCCTGCACTCCCCATTTCATACCTAAGCCTGCTCTTTCTTCTACGCATTCTACCGACTACCATATCACAAGGCCCGATCTCCTCGAGCCCTGGCATAGCTCAATGCACGGCGAGCCTTCTTCCATTGGCTTCATGTGCACCGTTTGTGCAGGGTATCGCCTCAGTGCCAGCCATGGCATGCTGTGATAACCTGAAGCAACTTTACACCAATGTCCCTTACTGCCTCTGCCTCTTGCTCAATGGCACTACCTTAAGCTCCTTCCCTTTAAACACTACTAGAGCTCTTCAGCTGCCTGATCTTTGCAGCCTTCAAGTCAACATCTCCACTTGTTCAGGCACAACTGTTCTTGTGCCACCTAGTTCACCCAGTTCTCCAGTTTCTCCTAGTGCAAACACCAACTCCACAGTCTCCAATGCTACAGTTTTGGCTTCTCCAGTGGCTCAACCAGCACCAAAACCGAGCATTCTGGGGTTAGGGATGGGCAGGATTAGTGCTAGTTTCAAACCAAGGATGGCAATTGAGTTCACAATTGCGATTGCTATGAAAACTTTTCTGTTTCTTGTATTGCCT

Protein sequence

MASLPSLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGIASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAIEFTIAIAMKTFLFLVLP
Homology
BLAST of MS002112 vs. NCBI nr
Match: XP_022134615.1 (protein YLS3 isoform X2 [Momordica charantia])

HSP 1 Score: 361.7 bits (927), Expect = 4.0e-96
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGIA 60
           MASLPSLPALPISYLSLLFLLRILPTTISQG ISSSPGIAQCTASLLPLASCAPFVQGIA
Sbjct: 1   MASLPSLPALPISYLSLLFLLRILPTTISQGLISSSPGIAQCTASLLPLASCAPFVQGIA 60

Query: 61  SVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGT 120
           SVPAMACCDNLKQLYTNVPYCLC+LLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGT
Sbjct: 61  SVPAMACCDNLKQLYTNVPYCLCILLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGT 120

Query: 121 TVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAI 180
           TVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAI
Sbjct: 121 TVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAI 180

Query: 181 EFTIAIAMKTFLFLVLP 198
           EFTIAIAMKTFLFLVLP
Sbjct: 181 EFTIAIAMKTFLFLVLP 197

BLAST of MS002112 vs. NCBI nr
Match: XP_038890355.1 (non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 3.0e-67
Identity = 149/198 (75.25%), Postives = 160/198 (80.81%), Query Frame = 0

Query: 1   MASLP--SLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQG 60
           MASLP   LP L ISYLSLLFLL +LP  ISQ P  SSP IAQCT SLLPLASCA FVQG
Sbjct: 1   MASLPYLPLPQLAISYLSLLFLLHVLPLAISQDPTFSSPTIAQCTTSLLPLASCASFVQG 60

Query: 61  IASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCS 120
           +   P M CCDNLKQLY NVP CLCLLLNGTTLSSFP+NTTRAL+LPDLCSLQVNIS CS
Sbjct: 61  VTPTPPMVCCDNLKQLYNNVPTCLCLLLNGTTLSSFPINTTRALELPDLCSLQVNISICS 120

Query: 121 GTTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRM 180
              +L PPS PSS V P  NTNST+SNATVLASPV QP PKPSI+GLG+GRISASFK R 
Sbjct: 121 --ALLGPPSPPSSHVPPRVNTNSTISNATVLASPVTQPTPKPSIVGLGLGRISASFKLRA 180

Query: 181 AIEFTIAIAMKTFLFLVL 197
            I+ T+ IAMKTFLFLV+
Sbjct: 181 GIQVTVVIAMKTFLFLVV 196

BLAST of MS002112 vs. NCBI nr
Match: KAG6589554.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-64
Identity = 143/197 (72.59%), Postives = 163/197 (82.74%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRI-LPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGI 60
           MASLP LP      L+LLFLL + LP  +SQ P  SSP IAQCTASLLPLASCAPFVQG+
Sbjct: 1   MASLPYLPC-----LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFVQGM 60

Query: 61  ASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSG 120
           AS+P M CC NLKQLYT+VP CLCLLLNGTTLSSFP+NTTRA QLPDLCSLQVNISTCS 
Sbjct: 61  ASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCS- 120

Query: 121 TTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMA 180
             +L PPS PSS VSP  +TN+T++NATVLA+PV QP PKPS++GLG+G ISASFKPR  
Sbjct: 121 -ALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 180

Query: 181 IEFTIAIAMKTFLFLVL 197
           I+ T+AIAMKTFLFL++
Sbjct: 181 IQLTVAIAMKTFLFLLV 190

BLAST of MS002112 vs. NCBI nr
Match: KAG7023240.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-64
Identity = 143/197 (72.59%), Postives = 163/197 (82.74%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRI-LPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGI 60
           MASLP LP      L+LLFLL + LP  +SQ P  SSP IAQCTASLLPLASCAPFVQG+
Sbjct: 30  MASLPYLPC-----LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFVQGM 89

Query: 61  ASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSG 120
           AS+P M CC NLKQLYT+VP CLCLLLNGTTLSSFP+NTTRA QLPDLCSLQVNISTCS 
Sbjct: 90  ASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCS- 149

Query: 121 TTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMA 180
             +L PPS PSS VSP  +TN+T++NATVLA+PV QP PKPS++GLG+G ISASFKPR  
Sbjct: 150 -ALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 209

Query: 181 IEFTIAIAMKTFLFLVL 197
           I+ T+AIAMKTFLFL++
Sbjct: 210 IQLTVAIAMKTFLFLLV 219

BLAST of MS002112 vs. NCBI nr
Match: XP_004138342.2 (protein YLS3 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 9.1e-64
Identity = 142/199 (71.36%), Postives = 160/199 (80.40%), Query Frame = 0

Query: 1   MASLPSLPALP---ISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQ 60
           MASLP LP LP   ISYLSLLFLL +LP TISQGP  S+P IAQCT S+LPLASCAPFVQ
Sbjct: 34  MASLPHLP-LPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQ 93

Query: 61  GIASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTC 120
           G+   P M CCDNLKQLY  VP CLCLLLNGT LSSFP+NTTRALQLPD+CSLQVNISTC
Sbjct: 94  GVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTC 153

Query: 121 SGTTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPR 180
           S   +L PPS PSS V P  + NST+SNATVLASP+ QP PKPSI+GLG+G+ISASFK +
Sbjct: 154 S--ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLK 213

Query: 181 MAIEFTIAIAMKTFLFLVL 197
             I+ T+ I + TFLFLV+
Sbjct: 214 GGIQLTVVITISTFLFLVV 229

BLAST of MS002112 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.2e-23
Identity = 91/205 (44.39%), Postives = 116/205 (56.59%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGIA 60
           MAS   L  L IS LS  FL  +L    +Q P       A C + LL LA C PFVQG A
Sbjct: 1   MASSTLLITLLIS-LSAFFLRMVL----AQVP-------ATCASRLLSLAPCGPFVQGFA 60

Query: 61  SVPAMACCDNLKQLYTNVPYCLCLLLNGT-TLS-SFPLNTTRALQLPDLCSLQVNISTCS 120
            +PA  CCD+L Q+Y+    CLCL LN T TLS +FP+N T ALQLP LC++  N STCS
Sbjct: 61  QLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTCS 120

Query: 121 GTTVLVPPSSPSSPV-SPSANTNSTVS-----NATVLASPVAQPAPKP-SILGLGMGRIS 180
            +     PS  SS    PS++T S +S     N+ V A+PVAQ AP+P S +GLG G  S
Sbjct: 121 SSFPGEAPSDSSSVAPPPSSSTGSQISQGAKNNSRVAATPVAQMAPRPTSFMGLGYGLKS 180

Query: 181 ASFKPRMAIE-FTIAIAMKTFLFLV 196
           +  K  + +  F +A  +   L L+
Sbjct: 181 SGSKSEIQLTIFALAAILPAALLLI 193

BLAST of MS002112 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-06
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 0

Query: 41  QCTASLLPLASCAPFVQGIASVPAMACCDNLKQLYTNVPYCLCLLL---NGTTLSSFPLN 100
           +CTA L+ +A+C P+VQG A  P   CC  LKQ+  +   CLC+++   N   L    +N
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDL-GLQVN 94

Query: 101 TTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPV--SPSANTNSTVSNATVLASPVAQ 160
            + AL LP +C    +I+ C     L  P+SP + V    +   N TVS A+      ++
Sbjct: 95  VSLALALPSVCHATADITKCPALLHL-DPNSPDAQVFYQLAKGLNETVS-ASAPTGSASE 154

Query: 161 PAPKPSILGLGMGRIS 172
           P    S  G   G  S
Sbjct: 155 PTSMSSTPGSSAGNNS 167

BLAST of MS002112 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-06
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 41  QCTASLLPLASCAPFVQGIASVPAMACCDNLKQLYTNVPYCLCLLL---NGTTLSSFPLN 100
           +CT  L+ +A+C P+VQG A  P   CC  LKQ+  +   CLC+++   N   L    +N
Sbjct: 34  ECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDL-GLQIN 93

Query: 101 TTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPV 134
            + AL LP +C    +++ C     L  P+SP + V
Sbjct: 94  VSLALALPSVCHAAADVTKCPALLHL-DPNSPDAQV 127

BLAST of MS002112 vs. ExPASy Swiss-Prot
Match: Q9LJ85 (Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3702 GN=LTPG20 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-04
Identity = 41/148 (27.70%), Postives = 64/148 (43.24%), Query Frame = 0

Query: 12  ISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLAS-CAPFVQGIAS---VPAMAC 71
           IS +  +  +  LP    Q P+S      QCT S++   S C  F+   +S    P+  C
Sbjct: 5   ISLVVAMIAVLALPIRGQQQPLS------QCTPSMMTTVSPCMGFITNSSSNGTSPSSDC 64

Query: 72  CDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGTTVLVPPS 131
           C++L+ L T    CLCL++ GT   + P+N T A+ LP  C++      C          
Sbjct: 65  CNSLRSLTTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAP 124

Query: 132 SPSSPVSPSANTNSTVSNATVLASPVAQ 156
            P++   PS +            +P AQ
Sbjct: 125 GPAATFGPSMSPGPETDPIVPEPTPAAQ 146

BLAST of MS002112 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 8.4e-04
Identity = 37/135 (27.41%), Postives = 58/135 (42.96%), Query Frame = 0

Query: 29  SQGPISSSPGIAQCTASLLPLASCAPF--VQGIASVPAMACCDNLKQLYTNVPYCLCLLL 88
           S  P         C++ +  +  C  F  V      P   CC  +K +    P CLC  L
Sbjct: 32  SMAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSAL 91

Query: 89  NGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPV-SPSANTNSTVSN 148
             +    F L+ T+AL +P +C++ ++ +    T     P SP  PV SP+ + +S  S 
Sbjct: 92  ESSREMGFVLDDTKALAMPKICNVPIDPNCDVSTPAASTPVSP--PVESPTTSPSSAKSP 151

Query: 149 ATVLASPVAQPAPKP 161
           A   +SP    +P P
Sbjct: 152 AITPSSPAVSHSPPP 164

BLAST of MS002112 vs. ExPASy TrEMBL
Match: A0A6J1BYQ4 (protein YLS3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006842 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGIA 60
           MASLPSLPALPISYLSLLFLLRILPTTISQG ISSSPGIAQCTASLLPLASCAPFVQGIA
Sbjct: 1   MASLPSLPALPISYLSLLFLLRILPTTISQGLISSSPGIAQCTASLLPLASCAPFVQGIA 60

Query: 61  SVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGT 120
           SVPAMACCDNLKQLYTNVPYCLC+LLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGT
Sbjct: 61  SVPAMACCDNLKQLYTNVPYCLCILLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGT 120

Query: 121 TVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAI 180
           TVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAI
Sbjct: 121 TVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMAI 180

Query: 181 EFTIAIAMKTFLFLVLP 198
           EFTIAIAMKTFLFLVLP
Sbjct: 181 EFTIAIAMKTFLFLVLP 197

BLAST of MS002112 vs. ExPASy TrEMBL
Match: A0A6J1E230 (protein YLS3 OS=Cucurbita moschata OX=3662 GN=LOC111430130 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.8e-64
Identity = 141/197 (71.57%), Postives = 162/197 (82.23%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRI-LPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGI 60
           MASLP LP      L+LLFLL + LP  +SQ P  SSP IAQCTASLLPLASCAPF+QG+
Sbjct: 1   MASLPYLPC-----LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGM 60

Query: 61  ASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSG 120
           AS+P M CC NLKQLYT+VP CLCLLLNGTTLSSFP+NTTRA QLPDLCSLQVNISTCS 
Sbjct: 61  ASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCS- 120

Query: 121 TTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMA 180
             +L PPS PSS VSP  +TN+T++NATVLA+PV QP PKPS++GLG+G ISASFKPR  
Sbjct: 121 -ALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 180

Query: 181 IEFTIAIAMKTFLFLVL 197
           I+ T+ IAMKTFLFL++
Sbjct: 181 IQLTVVIAMKTFLFLLV 190

BLAST of MS002112 vs. ExPASy TrEMBL
Match: A0A5A7TH96 (Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00390 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.3e-63
Identity = 143/198 (72.22%), Postives = 157/198 (79.29%), Query Frame = 0

Query: 1   MASLP--SLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQG 60
           MASLP   LP L ISYLSLLFLL +LP TISQGP  S+P IAQCT S+LPLASCAPFVQG
Sbjct: 1   MASLPYLPLPQLAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60

Query: 61  IASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCS 120
           +   P M CCDNLKQLY  VP CLCLLLN T LSSFP+NTTRALQLPDLCSLQVNISTCS
Sbjct: 61  VTPTPPMGCCDNLKQLYNIVPNCLCLLLNDTNLSSFPINTTRALQLPDLCSLQVNISTCS 120

Query: 121 GTTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRM 180
              +L  PS PSS V P  + NST+SNATVLASPV QP PKPSI+GLG+G+ISASFK R 
Sbjct: 121 --ALLGSPSPPSSHVPPRVHINSTISNATVLASPVTQPTPKPSIVGLGLGKISASFKLRG 180

Query: 181 AIEFTIAIAMKTFLFLVL 197
            I+ T  IA+ TFLFLV+
Sbjct: 181 GIQLTAVIAITTFLFLVV 196

BLAST of MS002112 vs. ExPASy TrEMBL
Match: A0A1S3BVJ6 (protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103494119 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.3e-63
Identity = 143/198 (72.22%), Postives = 157/198 (79.29%), Query Frame = 0

Query: 1   MASLP--SLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQG 60
           MASLP   LP L ISYLSLLFLL +LP TISQGP  S+P IAQCT S+LPLASCAPFVQG
Sbjct: 1   MASLPYLPLPQLAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60

Query: 61  IASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCS 120
           +   P M CCDNLKQLY  VP CLCLLLN T LSSFP+NTTRALQLPDLCSLQVNISTCS
Sbjct: 61  VTPTPPMGCCDNLKQLYNIVPNCLCLLLNDTNLSSFPINTTRALQLPDLCSLQVNISTCS 120

Query: 121 GTTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRM 180
              +L  PS PSS V P  + NST+SNATVLASPV QP PKPSI+GLG+G+ISASFK R 
Sbjct: 121 --ALLGSPSPPSSHVPPRVHINSTISNATVLASPVTQPTPKPSIVGLGLGKISASFKLRG 180

Query: 181 AIEFTIAIAMKTFLFLVL 197
            I+ T  IA+ TFLFLV+
Sbjct: 181 GIQLTAVIAITTFLFLVV 196

BLAST of MS002112 vs. ExPASy TrEMBL
Match: A0A6J1JIC4 (protein YLS3 OS=Cucurbita maxima OX=3661 GN=LOC111484860 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.2e-63
Identity = 142/197 (72.08%), Postives = 158/197 (80.20%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRI-LPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGI 60
           MASLP LP      L+LL LL + LP  +SQ P  SSP IAQCT SLL LASCAPFVQG+
Sbjct: 1   MASLPYLPC-----LTLLLLLHVTLPIAVSQDPTPSSPTIAQCTTSLLQLASCAPFVQGM 60

Query: 61  ASVPAMACCDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSG 120
           AS P M CC NLKQLYT+VP CLCLLLNGTTLSSFP+NTTRA QLPDLCSLQVNIS CS 
Sbjct: 61  ASTPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISACS- 120

Query: 121 TTVLVPPSSPSSPVSPSANTNSTVSNATVLASPVAQPAPKPSILGLGMGRISASFKPRMA 180
             +L PPS PSS VSP  NTNST++NATVLA+PV QP PKPS++GLG+G ISASFKPR  
Sbjct: 121 -ALLEPPSPPSSHVSPRVNTNSTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 180

Query: 181 IEFTIAIAMKTFLFLVL 197
           I+ T+AIAMKTFLFLV+
Sbjct: 181 IQLTVAIAMKTFLFLVV 190

BLAST of MS002112 vs. TAIR 10
Match: AT1G73890.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-24
Identity = 91/205 (44.39%), Postives = 116/205 (56.59%), Query Frame = 0

Query: 1   MASLPSLPALPISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLASCAPFVQGIA 60
           MAS   L  L IS LS  FL  +L    +Q P       A C + LL LA C PFVQG A
Sbjct: 1   MASSTLLITLLIS-LSAFFLRMVL----AQVP-------ATCASRLLSLAPCGPFVQGFA 60

Query: 61  SVPAMACCDNLKQLYTNVPYCLCLLLNGT-TLS-SFPLNTTRALQLPDLCSLQVNISTCS 120
            +PA  CCD+L Q+Y+    CLCL LN T TLS +FP+N T ALQLP LC++  N STCS
Sbjct: 61  QLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTCS 120

Query: 121 GTTVLVPPSSPSSPV-SPSANTNSTVS-----NATVLASPVAQPAPKP-SILGLGMGRIS 180
            +     PS  SS    PS++T S +S     N+ V A+PVAQ AP+P S +GLG G  S
Sbjct: 121 SSFPGEAPSDSSSVAPPPSSSTGSQISQGAKNNSRVAATPVAQMAPRPTSFMGLGYGLKS 180

Query: 181 ASFKPRMAIE-FTIAIAMKTFLFLV 196
           +  K  + +  F +A  +   L L+
Sbjct: 181 SGSKSEIQLTIFALAAILPAALLLI 193

BLAST of MS002112 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-07
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 41  QCTASLLPLASCAPFVQGIASVPAMACCDNLKQLYTNVPYCLCLLL---NGTTLSSFPLN 100
           +CT  L+ +A+C P+VQG A  P   CC  LKQ+  +   CLC+++   N   L    +N
Sbjct: 34  ECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDL-GLQIN 93

Query: 101 TTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPV 134
            + AL LP +C    +++ C     L  P+SP + V
Sbjct: 94  VSLALALPSVCHAAADVTKCPALLHL-DPNSPDAQV 127

BLAST of MS002112 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-07
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 0

Query: 41  QCTASLLPLASCAPFVQGIASVPAMACCDNLKQLYTNVPYCLCLLL---NGTTLSSFPLN 100
           +CTA L+ +A+C P+VQG A  P   CC  LKQ+  +   CLC+++   N   L    +N
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDL-GLQVN 94

Query: 101 TTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPV--SPSANTNSTVSNATVLASPVAQ 160
            + AL LP +C    +I+ C     L  P+SP + V    +   N TVS A+      ++
Sbjct: 95  VSLALALPSVCHATADITKCPALLHL-DPNSPDAQVFYQLAKGLNETVS-ASAPTGSASE 154

Query: 161 PAPKPSILGLGMGRIS 172
           P    S  G   G  S
Sbjct: 155 PTSMSSTPGSSAGNNS 167

BLAST of MS002112 vs. TAIR 10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.6e-05
Identity = 41/148 (27.70%), Postives = 64/148 (43.24%), Query Frame = 0

Query: 12  ISYLSLLFLLRILPTTISQGPISSSPGIAQCTASLLPLAS-CAPFVQGIAS---VPAMAC 71
           IS +  +  +  LP    Q P+S      QCT S++   S C  F+   +S    P+  C
Sbjct: 5   ISLVVAMIAVLALPIRGQQQPLS------QCTPSMMTTVSPCMGFITNSSSNGTSPSSDC 64

Query: 72  CDNLKQLYTNVPYCLCLLLNGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGTTVLVPPS 131
           C++L+ L T    CLCL++ GT   + P+N T A+ LP  C++      C          
Sbjct: 65  CNSLRSLTTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAP 124

Query: 132 SPSSPVSPSANTNSTVSNATVLASPVAQ 156
            P++   PS +            +P AQ
Sbjct: 125 GPAATFGPSMSPGPETDPIVPEPTPAAQ 146

BLAST of MS002112 vs. TAIR 10
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 6.0e-05
Identity = 37/135 (27.41%), Postives = 58/135 (42.96%), Query Frame = 0

Query: 29  SQGPISSSPGIAQCTASLLPLASCAPF--VQGIASVPAMACCDNLKQLYTNVPYCLCLLL 88
           S  P         C++ +  +  C  F  V      P   CC  +K +    P CLC  L
Sbjct: 32  SMAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSAL 91

Query: 89  NGTTLSSFPLNTTRALQLPDLCSLQVNISTCSGTTVLVPPSSPSSPV-SPSANTNSTVSN 148
             +    F L+ T+AL +P +C++ ++ +    T     P SP  PV SP+ + +S  S 
Sbjct: 92  ESSREMGFVLDDTKALAMPKICNVPIDPNCDVSTPAASTPVSP--PVESPTTSPSSAKSP 151

Query: 149 ATVLASPVAQPAPKP 161
           A   +SP    +P P
Sbjct: 152 AITPSSPAVSHSPPP 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022134615.14.0e-9698.98protein YLS3 isoform X2 [Momordica charantia][more]
XP_038890355.13.0e-6775.25non-specific lipid transfer protein GPI-anchored 13 [Benincasa hispida][more]
KAG6589554.11.8e-6472.59Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7023240.11.8e-6472.59Protein YLS3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_004138342.29.1e-6471.36protein YLS3 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9C9B16.2e-2344.39Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3... [more]
O648645.3e-0633.09Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3... [more]
O648655.3e-0634.38Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3... [more]
Q9LJ856.4e-0427.70Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3... [more]
Q2PE608.4e-0427.41Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3... [more]
Match NameE-valueIdentityDescription
A0A6J1BYQ42.0e-9698.98protein YLS3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006842 PE=4 SV=1[more]
A0A6J1E2305.8e-6471.57protein YLS3 OS=Cucurbita moschata OX=3662 GN=LOC111430130 PE=4 SV=1[more]
A0A5A7TH961.3e-6372.22Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00390 P... [more]
A0A1S3BVJ61.3e-6372.22protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103494119 PE=4 SV=1[more]
A0A6J1JIC42.2e-6372.08protein YLS3 OS=Cucurbita maxima OX=3661 GN=LOC111484860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G73890.14.4e-2444.39Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G44300.13.7e-0734.38Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G44290.13.7e-0733.09Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G22620.14.6e-0527.70Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G36150.16.0e-0527.41Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 42..117
e-value: 8.0E-4
score: 28.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 28..117
e-value: 6.6E-14
score: 51.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 38..116
e-value: 2.6E-14
score: 54.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 41..120
IPR043325Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) ProteinPANTHERPTHR33044BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 20..148
NoneNo IPR availablePANTHERPTHR33044:SF11BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 20..148
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 49..110
e-value: 2.37762E-11
score: 55.1255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS002112.1MS002112.1mRNA