Homology
BLAST of MS002101 vs. NCBI nr
Match:
XP_022134936.1 (DNA mismatch repair protein MSH2 isoform X1 [Momordica charantia])
HSP 1 Score: 1860.5 bits (4818), Expect = 0.0e+00
Identity = 943/946 (99.68%), Postives = 945/946 (99.89%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT
Sbjct: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG
Sbjct: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPY+RPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYSRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDM KGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMYKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 946
BLAST of MS002101 vs. NCBI nr
Match:
XP_022134937.1 (DNA mismatch repair protein MSH2 isoform X2 [Momordica charantia])
HSP 1 Score: 1830.8 bits (4741), Expect = 0.0e+00
Identity = 932/946 (98.52%), Postives = 934/946 (98.73%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPP DYYTAHGDNAVFIAKT
Sbjct: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPP-----------DYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG
Sbjct: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPY+RPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYSRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDM KGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMYKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 935
BLAST of MS002101 vs. NCBI nr
Match:
XP_023516636.1 (DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1769.6 bits (4582), Expect = 0.0e+00
Identity = 896/946 (94.71%), Postives = 921/946 (97.36%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M +NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD+AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGN SEALSSVSVSKNMFESI RDLLLERMDHTLELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGL YVDL+KR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKFGD+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNY +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKY+E LEIWTD +HLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQI DLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYK+FQKELV RVIETASSF EVF PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPYTRPDITSSDEG+IILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA NTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFST++T SAT G+E +P SKRKREF S+DMSKGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKE--IP--SKRKREFGSEDMSKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of MS002101 vs. NCBI nr
Match:
XP_038890004.1 (DNA mismatch repair protein MSH2 [Benincasa hispida])
HSP 1 Score: 1767.7 bits (4577), Expect = 0.0e+00
Identity = 897/946 (94.82%), Postives = 916/946 (96.83%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M +NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGN SEALSSVSVSKNMFESI RDLLLERMDH LELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNASEALSSVSVSKNMFESITRDLLLERMDHILELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVAL P FRENGC+VGLGYVDL+KRVMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRENGCMVGLGYVDLTKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKFGDIKPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNY +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLE KTDANKNFSLFGLMNRTCT GMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 MRALNVLERKTDANKNFSLFGLMNRTCTVGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRIPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKYLEFLEIWTD +HLNKFNNLVETAVDLDQLENGEYMISSSYD LSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDRGLSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
E+IEQQI DLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ETIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYKS QKELV RVIETASSF EVF PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPYTRP+ITSSDEG+IILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPNITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA NTDLEPHGKQ+VGV NFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQMVGVENFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFS++TT SAT G+E +P KRKREF SDDMSKGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSSDTTTSATTGKE--IP--LKRKREFGSDDMSKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of MS002101 vs. NCBI nr
Match:
KAG7023250.1 (DNA mismatch repair protein MSH2 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1766.5 bits (4574), Expect = 0.0e+00
Identity = 893/946 (94.40%), Postives = 919/946 (97.15%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M +NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD+AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGN SEALSSVSVSKNMFESI RDLLLERMDHTLELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGL YVDL+KR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKFGD+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNY +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKY+E LEIWTD +HLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQI DLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYK+FQKELV RVIETASSF EVF PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPYTRPDITSSDEG+IILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTAL NTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFST++T SAT G+E +P SKRKREF S+DMSKGV R
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKE--IP--SKRKREFGSEDMSKGVGR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of MS002101 vs. ExPASy Swiss-Prot
Match:
O24617 (DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV=1)
HSP 1 Score: 1419.8 bits (3674), Expect = 0.0e+00
Identity = 697/946 (73.68%), Postives = 829/946 (87.63%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M N ++Q+KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYTAHG+N+VFIAKT
Sbjct: 1 MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YY TTTALRQLG+GS ALSSVS+S+NMFE+I RDLLLER DHT+ELYEGSGS WRLVK+G
Sbjct: 61 YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQD+P +V++ P+F + C++G+ YVDL++RV+G+AEFLDDS
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTN+ES+L+ LG KEC+ P ESGK + K L+D+L +C VM+TERKK EFK RDL DL
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKG++EPVRDLVSGF+ A ALGALL+++ELL++E NYGN+ +++Y++ +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNV+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+E+ LRQDLRQHLKRISD+ERL LE+RR GLQHI+KLYQS+IR+PFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
F+SLI E+YL+ LE +D +HL KF +LVE +VDLDQLENGEYMISSSYD L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
E +EQQI +LH++ A +LDL VDKALKLDK QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQ +V++Y+S QKELV RV+ET +SF EVF LA LLSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLL FADLA+SCPTPY RP+ITSSD GDI+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV+V +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA+AN+++ + VGVANFHVSAHID+ + KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFP SVVALAREKAAELEDFS ++ I I E+ ++S RE D++S+G R
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSSMI---INNEESGKRKS---REDDPDEVSRGAER 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
A +FL+EF+ +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 AHKFLKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
BLAST of MS002101 vs. ExPASy Swiss-Prot
Match:
Q9XGC9 (DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1)
HSP 1 Score: 1287.3 bits (3330), Expect = 0.0e+00
Identity = 648/943 (68.72%), Postives = 763/943 (80.91%), Query Frame = 0
Query: 3 DNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKTYY 62
D + KLPE KLDA+QAQGF++FFK LP D RAVR FDRRDYYTAHG+NA FIA+TYY
Sbjct: 5 DFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIARTYY 64
Query: 63 RTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSGSP 122
T +ALRQLG+ S+ + S SVSK MFE+I R++LLER D TLELYEGSGS WRL KSG+P
Sbjct: 65 HTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTP 124
Query: 123 GNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSHFT 182
GNIGSFED+LFANN+M+DSP IVAL P RE+ VGL ++D++ R +G+AEF +DS FT
Sbjct: 125 GNIGSFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRFT 184
Query: 183 NVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRL 242
NVESALV LGCKECLLP + K D+ PL D ++ C V+LTE+KK++FK RDL QDL R+
Sbjct: 185 NVESALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGRI 244
Query: 243 VKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAAMR 302
++GSVEPVRDL+S F++A LGALL+YAELLAD++NYGNY ++KYNL+ YMRLDSAA+R
Sbjct: 245 IRGSVEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAVR 304
Query: 303 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAFME 362
ALN+ E KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDV EIN+RLD+VQAF+E
Sbjct: 305 ALNIAEGKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVE 364
Query: 363 DTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQFS 422
D LRQ LRQ LKRISDI+RLTH L K+ A LQ +VKLYQS R+P+IK L+ Y GQFS
Sbjct: 365 DPELRQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFS 424
Query: 423 SLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQES 482
+LI+ K+LE LE W N +F++LVETA+DL QLENGEY IS Y L LK+
Sbjct: 425 TLIRSKFLEPLEEWMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSV 484
Query: 483 IEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETR 542
+E I +LH A+DLDL VDK LKL+KG+ GHVFR++KKEE KVRKKL+ ++++ETR
Sbjct: 485 VENHINNLHVDTASDLDLSVDKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIETR 544
Query: 543 KDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELDVL 602
KDGVKFTN+KLK L DQYQ + EY S QK++V V+ + +F EVF A +LSELDVL
Sbjct: 545 KDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVL 604
Query: 603 LGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQ 662
FADLA+SCP PY RPDIT+SDEGDI+L GSRHPC+EAQD VNFIPNDC LVRGKSWFQ
Sbjct: 605 QSFADLATSCPVPYVRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQ 664
Query: 663 IITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTF 722
IITGPNMGGKSTFIRQVGVN+LMAQVG FVPCD+ASISVRDCIFARVGAGDCQL GVSTF
Sbjct: 665 IITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTF 724
Query: 723 MQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFH 782
MQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHL+EV +APTLFATHFH
Sbjct: 725 MQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFH 784
Query: 783 ELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEF 842
ELTALA N D H I GVAN+HV AHID + KLTMLYKVEPGACDQSFGIHVAEF
Sbjct: 785 ELTALAHRNDDEHQHISDI-GVANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAEF 844
Query: 843 ANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVARAR 902
ANFP +VVALA+ KAAELEDFST T S + +E SKRKR FS DD+++G ARAR
Sbjct: 845 ANFPEAVVALAKSKAAELEDFSTTPTFSDDLKDEVG----SKRKRVFSPDDITRGAARAR 904
Query: 903 QFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQF 946
FLEEF+ LP+D+MD + L+ ++++ L+KDA D+ WLQQF
Sbjct: 905 LFLEEFAALPMDEMDGSKILEMATKMKADLQKDAADNPWLQQF 941
BLAST of MS002101 vs. ExPASy Swiss-Prot
Match:
Q5XXB5 (DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1)
HSP 1 Score: 716.8 bits (1849), Expect = 3.1e-205
Identity = 400/932 (42.92%), Postives = 591/932 (63.41%), Query Frame = 0
Query: 14 LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHGDNAVFIAKTYYRTTTALRQLG 73
L+L++ GF+ FF+++P + VR FDR D+YTAHG++A+ A+ ++T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 74 -NGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEG-SGSK------WRLVKSGSPGN 133
G++ L SV +SK FES V+DLLL R + +E+Y+ +G+K W L SPGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 128
Query: 134 IGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSHFTNV 193
+ FED+LF NN+M S +V + + + VG+GYVD ++R +G+ EF D+ F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188
Query: 194 ESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
E+ L+ +G KEC+LP GD+ L + + G+++TERKK++F +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 248
Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 313
G E + V + A ++L A++ + ELL+D+SN+G + + ++ YM+LD AA
Sbjct: 249 GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308
Query: 314 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 373
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D I RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368
Query: 374 FMEDTALRQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYE 433
F+ED LRQ L++ L+R D+ RL +++ A LQ +LYQ ++P + ALE +E
Sbjct: 369 FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE 428
Query: 434 GQFSSLIKEKYLEFLEIWTD-ANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
G+ L+ ++ L TD + +KF ++ET +D+DQ+EN E+++ S+DP LS+L+
Sbjct: 429 GKHQKLLLAVFVTPL---TDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488
Query: 494 NVQESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
+ +E+++ A DL L K +KLD TQFG+ FR+T KEE +R + +F
Sbjct: 489 EIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548
Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLS 613
++ +K+GVKFTN+KL L ++Y K EY+ Q +V+ ++ +S ++E L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608
Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
+LD ++ FA +++ P PY RP I +G IIL+ SRH CVE QD + FIPND +
Sbjct: 609 QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKD 668
Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
K F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728
Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ I A +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788
Query: 794 ATHFHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
ATHFHELTALA QI V N HV+A ++ LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALA----------NQIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848
Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKG 913
HVAE ANFP V+ A++KA ELE+F IGE Q + K+ + + +G
Sbjct: 849 HVAELANFPKHVIECAKQKALELEEFQ-------YIGESQGYDMEPAAKKCYL--EREQG 908
Query: 914 VARARQFLEEFSNLPLDKMDLKEALQQVSQLR 930
++FL + +P +M + ++ QL+
Sbjct: 909 EKIIQEFLSKVKQMPFTEMSEENITIKLKQLK 911
BLAST of MS002101 vs. ExPASy Swiss-Prot
Match:
P43247 (DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1)
HSP 1 Score: 712.2 bits (1837), Expect = 7.7e-204
Identity = 394/932 (42.27%), Postives = 587/932 (62.98%), Query Frame = 0
Query: 14 LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHGDNAVFIAKTYYRTTTALRQLG 73
L+L+ GF+ FF+ +P S VR FDR D+YTAHG++A+ A+ ++T ++ +G
Sbjct: 9 LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 74 -NGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSG-------SKWRLVKSGSPGN 133
GS+ L SV +SK FES V+DLLL R + +E+Y+ ++W L SPGN
Sbjct: 69 PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 128
Query: 134 IGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSHFTNV 193
+ FED+LF NN+M S ++ + + VG+GYVD ++R +G+ EF ++ F+N+
Sbjct: 129 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 188
Query: 194 ESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
E+ L+ +G KEC+LP GD+ L + + G+++TERK+++F +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248
Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 313
G E + + A ++L A++ + ELL+D+SN+G + + ++ YM+LD AA
Sbjct: 249 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 308
Query: 314 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 373
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D I RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 368
Query: 374 FMEDTALRQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYE 433
F+ED+ LRQ L++ L+R D+ RL +++ A LQ +LYQ ++P + ALE YE
Sbjct: 369 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 428
Query: 434 GQFSSLIKEKYL-EFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
G+ +L+ ++ +++ +D +KF ++ET +D+DQ+EN E+++ S+DP LS+L+
Sbjct: 429 GRHQALLLAVFVTPLIDLRSD---FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488
Query: 494 NVQESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
V + +E+++ A L L K +KLD QFG+ FR+T KEE +R + +F
Sbjct: 489 EVMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFS 548
Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLS 613
++ +K+GVKFTN++L L ++Y K EY+ Q +V+ ++ +S ++E L ++L+
Sbjct: 549 TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608
Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
LD ++ FA ++++ P PY RP I +G IIL+ SRH CVE QD V FIPND +
Sbjct: 609 HLDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD 668
Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
K F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728
Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI +++ I A +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF 788
Query: 794 ATHFHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
ATHFHELTALA QI V N HV+A ++ LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALA----------NQIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848
Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKG 913
HVAE ANFP V+A A++KA ELE+F I ++G ++ P +R E +G
Sbjct: 849 HVAELANFPRHVIACAKQKALELEEFQ---NIGTSLGCDEAEPAAKRRCLE-----REQG 908
Query: 914 VARARQFLEEFSNLPLDKMDLKEALQQVSQLR 930
+FL + +P M + ++ QL+
Sbjct: 909 EKIILEFLSKVKQVPFTAMSEESISAKLKQLK 912
BLAST of MS002101 vs. ExPASy Swiss-Prot
Match:
Q3MHE4 (DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1)
HSP 1 Score: 711.4 bits (1835), Expect = 1.3e-203
Identity = 396/932 (42.49%), Postives = 591/932 (63.41%), Query Frame = 0
Query: 14 LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHGDNAVFIAKTYYRTTTALRQLG 73
L+LD+ GF+ FF+ +P + VR FDR D+YTAH ++A+ A+ ++T ++ +G
Sbjct: 9 LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68
Query: 74 -NGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEG-SGSK------WRLVKSGSPGN 133
G++ L SV +SK FES V+DLLL R + +E+Y+ +G+K W L SPGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 128
Query: 134 IGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSHFTNV 193
+ FED+LF NN+M S +V + + + VG+GYVD ++R +G+ EF D+ F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188
Query: 194 ESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
E+ L+ +G KEC++P GD+ L + + G+++TERK+++F +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVMP-GGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248
Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 313
G E V V + A ++L A++ + ELL+D+SN+G + + ++ YM+LD AA
Sbjct: 249 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308
Query: 314 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 373
+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D I RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368
Query: 374 FMEDTALRQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYE 433
F+ED LRQ+L++ L+R D+ RL +++ A LQ +LYQ ++P + ALE YE
Sbjct: 369 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 428
Query: 434 GQFSSLIKEKYL-EFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
G+ +L ++ +++ +D +KF ++ET +D+DQ+EN E+++ S+DP LS+L+
Sbjct: 429 GKHQALFLAVFVTPLIDLRSD---FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488
Query: 494 NVQESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
+ + +E+++ A DL L K +KLD TQFG+ FR+T KEE +R + +F
Sbjct: 489 EIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548
Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLS 613
++ +K+GVKFTN+KL L ++Y K EY+ Q +V+ ++ +S ++E L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA 608
Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
+LD ++ FA ++ + P PY RP I G I L+ SRH CVE QD V FIPND +
Sbjct: 609 QLDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD 668
Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
K F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK 728
Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ I A +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788
Query: 794 ATHFHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
ATHFHELTALA QI V N HV+A ++ LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALA----------NQIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848
Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKG 913
HVAE ANFP V+ A++KA ELE+F IG+ Q+ + + + +G
Sbjct: 849 HVAELANFPRHVIECAKQKALELEEFQ-------NIGKPQECDEMEPAAKRCYL-EREQG 908
Query: 914 VARARQFLEEFSNLPLDKMDLKEALQQVSQLR 930
++FL + +P +M + +++ QL+
Sbjct: 909 EKIIQEFLSKVKQVPFTEMSEESITRKLKQLK 912
BLAST of MS002101 vs. ExPASy TrEMBL
Match:
A0A6J1BZ63 (DNA mismatch repair protein MSH2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007070 PE=3 SV=1)
HSP 1 Score: 1860.5 bits (4818), Expect = 0.0e+00
Identity = 943/946 (99.68%), Postives = 945/946 (99.89%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT
Sbjct: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG
Sbjct: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPY+RPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYSRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDM KGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMYKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 946
BLAST of MS002101 vs. ExPASy TrEMBL
Match:
A0A6J1C185 (DNA mismatch repair protein MSH2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007070 PE=3 SV=1)
HSP 1 Score: 1830.8 bits (4741), Expect = 0.0e+00
Identity = 932/946 (98.52%), Postives = 934/946 (98.73%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPP DYYTAHGDNAVFIAKT
Sbjct: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPP-----------DYYTAHGDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG
Sbjct: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPY+RPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYSRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDM KGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMYKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 935
BLAST of MS002101 vs. ExPASy TrEMBL
Match:
A0A6J1E222 (DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 PE=3 SV=1)
HSP 1 Score: 1764.6 bits (4569), Expect = 0.0e+00
Identity = 893/946 (94.40%), Postives = 919/946 (97.15%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M +NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT HGD+AVFIAKT
Sbjct: 1 MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGN SEALSSVSVSKNMFESI RDLLLERMDHTLELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGL YVDL+KR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKFGD+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNY +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKY+E LEIWTD +HLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQI DLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYK+FQKELV RVIETASSF EVF PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPYTRPDITSSDEG+IILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA NTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFST++T SAT G+E +P SKRKREF S+DMSKGV R
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKE--IP--SKRKREFGSEDMSKGVGR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEF+NLPLDKMDLKEALQQVSQLRDGLKKDA +SNWLQQFL
Sbjct: 901 ARQFLEEFANLPLDKMDLKEALQQVSQLRDGLKKDAANSNWLQQFL 942
BLAST of MS002101 vs. ExPASy TrEMBL
Match:
A0A6J1JGF9 (DNA mismatch repair protein MSH2 OS=Cucurbita maxima OX=3661 GN=LOC111484889 PE=3 SV=1)
HSP 1 Score: 1758.0 bits (4552), Expect = 0.0e+00
Identity = 887/946 (93.76%), Postives = 917/946 (96.93%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M +NVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDY+T HGDNAVFIAKT
Sbjct: 1 MNENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYFTVHGDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGN SEALSSVSVSKNMFESI RDLLLERMDHTLELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGL Y+DL+KR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYIDLTKRLMGLAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPL+SGKFGD+KPLHD LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNY +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTALRQDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKY+E LEIWTD +HLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKL+N Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLRNAQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQI DLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQK+VEEYK+FQKELV RVIETASSF EVF PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKLVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPYTRPDITSSDEG+IILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKA ISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKAIISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKG+TEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGSTEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA NTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKA+ELEDFST++T SA G+E +P SKRKREF S+DMSKGV R
Sbjct: 841 EFANFPSSVVALAREKASELEDFSTDSTTSANTGKE--IP--SKRKREFGSEDMSKGVVR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of MS002101 vs. ExPASy TrEMBL
Match:
A0A5D3DX26 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00250 PE=3 SV=1)
HSP 1 Score: 1753.0 bits (4539), Expect = 0.0e+00
Identity = 893/946 (94.40%), Postives = 913/946 (96.51%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M DNVD+QSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAH DNAVFIAKT
Sbjct: 1 MDDNVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YYRTTTALRQLGN SE+LSSVSVSKNMFESI RDLLLER DHTLELYEGSGS WRL+KSG
Sbjct: 61 YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQDSPAIVAL P FR+NGCIVGLGYVDL+KRVMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFLDDSH 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTNVESALVGLGCKECLLPLESGK GDIKPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNY +QKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
+RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+EDTAL QDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
FSSLIKEKYLEFLE TD +HLNKFNNLVETA+DLDQLENGEYMISSSYD LSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
ESIEQQI DLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQKIVEEYKS QK+LV RVIETASSF EVF PLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLLGFADLASSCPTPYTRPDITSSDEG+IILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA NTDL+ HGKQ+VGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFPSSVVALAREKAAELEDFST+TT T G+E +P SKRKREFSSDDMSKGVAR
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKE--IP--SKRKREFSSDDMSKGVAR 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942
BLAST of MS002101 vs. TAIR 10
Match:
AT3G18524.1 (MUTS homolog 2 )
HSP 1 Score: 1419.8 bits (3674), Expect = 0.0e+00
Identity = 697/946 (73.68%), Postives = 829/946 (87.63%), Query Frame = 0
Query: 1 MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60
M N ++Q+KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYTAHG+N+VFIAKT
Sbjct: 1 MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60
Query: 61 YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG 120
YY TTTALRQLG+GS ALSSVS+S+NMFE+I RDLLLER DHT+ELYEGSGS WRLVK+G
Sbjct: 61 YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120
Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH 180
SPGNIGSFEDVLFANNEMQD+P +V++ P+F + C++G+ YVDL++RV+G+AEFLDDS
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180
Query: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS 240
FTN+ES+L+ LG KEC+ P ESGK + K L+D+L +C VM+TERKK EFK RDL DL
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240
Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA 300
RLVKG++EPVRDLVSGF+ A ALGALL+++ELL++E NYGN+ +++Y++ +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300
Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
MRALNV+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360
Query: 361 MEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ 420
+E+ LRQDLRQHLKRISD+ERL LE+RR GLQHI+KLYQS+IR+PFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420
Query: 421 FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
F+SLI E+YL+ LE +D +HL KF +LVE +VDLDQLENGEYMISSSYD L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480
Query: 481 ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
E +EQQI +LH++ A +LDL VDKALKLDK QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540
Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD 600
TRKDGVKFTNTKLKKLGDQYQ +V++Y+S QKELV RV+ET +SF EVF LA LLSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600
Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
VLL FADLA+SCPTPY RP+ITSSD GDI+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660
Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720
Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV+V +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780
Query: 781 FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
FHELTALA+AN+++ + VGVANFHVSAHID+ + KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840
Query: 841 EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMSKGVAR 900
EFANFP SVVALAREKAAELEDFS ++ I I E+ ++S RE D++S+G R
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSSMI---INNEESGKRKS---REDDPDEVSRGAER 900
Query: 901 ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 947
A +FL+EF+ +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 AHKFLKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
BLAST of MS002101 vs. TAIR 10
Match:
AT3G24495.1 (MUTS homolog 7 )
HSP 1 Score: 205.3 bits (521), Expect = 2.2e-52
Identity = 192/675 (28.44%), Postives = 298/675 (44.15%), Query Frame = 0
Query: 244 KGSVEPVRDLVSGF---EFAPAALGALLAYAE--LLADESNYGN-YIMQKYNLDSYMRLD 303
KGS E V G + A +ALG L+ + L D +G+ + Q Y +R+D
Sbjct: 499 KGSSESWNCAVDGLNECDVALSALGELINHLSRLKLEDVLKHGDIFPYQVYR--GCLRID 558
Query: 304 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLV 363
M L + + D + +L+ ++ C + GKRLL W+ PL DV+ IN RLD+V
Sbjct: 559 GQTMVNLEIFNNSCDGGPSGTLYKYLD-NCVSPTGKRLLRNWICHPLKDVESINKRLDVV 618
Query: 364 QAFMEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENY 423
+ F ++ Q Q+L ++ D+ERL + IK+++ +
Sbjct: 619 EEFTANSESMQITGQYLHKLPDLERL-----------------------LGRIKSSVRSS 678
Query: 424 EGQFSSLIKEKYLEFLEIWTDANHLNKFNNLVE---TAVD-LDQLENGEYMISSSYDPAL 483
+L+ +K L+ + F +V+ + +D L L+ M+S Y L
Sbjct: 679 ASVLPALLGKKVLK--------QRVKAFGQIVKGFRSGIDLLLALQKESNMMSLLY--KL 738
Query: 484 SKLKNVQESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLS 543
KL + ++ + A D D P
Sbjct: 739 CKLPILVGKSGLELFLSQFEAAIDSDFP-------------------------------- 798
Query: 544 THFIVLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLA 603
Q Q + +E L++ IE A+ + EV
Sbjct: 799 -----------------------NYQNQDVTDENAETLTILIELFIERATQWSEVI---- 858
Query: 604 ELLSELDVLLGFADLAS----SCPTPYTRPDITSSDE-----GDII-LEGSRHPCVEAQD 663
+S LDVL FA AS S P P+ ++D+ G I+ ++G HP A D
Sbjct: 859 HTISCLDVLRSFAIAASLSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFAVAAD 918
Query: 664 WVNFIPNDCKLVRGK-------SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDK 723
+PND L + ++TGPNMGGKST +R + ++ AQ+GC+VPC+
Sbjct: 919 GQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCES 978
Query: 724 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDG 783
IS+ D IF R+GA D + G STF+ E ETAS+L+ AT+ SL+I+DELGRGTST+DG
Sbjct: 979 CEISLVDTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDG 1038
Query: 784 FGLAWAICEHLVEVIKAPTLFATHFHELTALARANTDLEPHGKQIVGVANFHVSAHIDSS 843
+ +A+++ HLVE ++ LFATH+H LT ++ + K +
Sbjct: 1039 YAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVT--SKHMACAFKSRSDYQPRGC 1064
Query: 844 NHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELEDFSTNTTISATIGEE 892
+ L LY++ GAC +S+G+ VA A P+ VV A A ++ +IGE
Sbjct: 1099 DQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASGAAQAMK---------RSIGEN 1064
BLAST of MS002101 vs. TAIR 10
Match:
AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )
HSP 1 Score: 199.5 bits (506), Expect = 1.2e-50
Identity = 172/617 (27.88%), Postives = 282/617 (45.71%), Query Frame = 0
Query: 294 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSR 353
M L + ++ L V+++ +D +++ SLF MN T T G RLL W+ PL D I++R
Sbjct: 420 MTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTV-YGSRLLRHWVTHPLCDRNLISAR 479
Query: 354 LDLVQAFM------EDTALRQDLRQH---------------------LKRISDIER-LTH 413
LD V + L +L + + R SDI+R +T
Sbjct: 480 LDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITR 539
Query: 414 YLEKRRAGLQHI-----VKLYQSSIRVPFIKNALENYEGQFSSLIKEKYLEFLEIWTDAN 473
+ + I + L I+ IK E Q +++ + + + +
Sbjct: 540 IFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPV 599
Query: 474 HLNKFNNLV-----ETAVDLDQLENGEYMISSSYDPALSKLKN----VQESIEQQILDLH 533
++ L+ E AV D L+ + SS P L++ + ++E ++ I
Sbjct: 600 VVDNAGKLLSALNKEAAVRGDLLD--ILITSSDQFPELAEARQAVLVIREKLDSSIASFR 659
Query: 534 RQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGVKFTNT 593
+++A + +F V IT E V K+ +++ + + K +++
Sbjct: 660 KKLA-------------IRNLEFLQVSGITHLIELPVDSKVPMNWVKVNSTKKTIRYHPP 719
Query: 594 KLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELDVLLGFADLASS 653
++ D+ E + +++ S + F + L+ LD L + L+ +
Sbjct: 720 EIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRN 779
Query: 654 CPTPYTRPDITSSDEG-DIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMG 713
Y RP+ E +I ++ RHP +E NF+PND L + QIITGPNMG
Sbjct: 780 --KNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMG 839
Query: 714 GKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 773
GKS +IRQV + +MAQVG FVP A + V D +F R+GA D G STF++E+ E +
Sbjct: 840 GKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEAS 899
Query: 774 SILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALARA 833
I++ + +SL+I+DELGRGTST+DG +A+A +HL+ + LF TH+ E+ ++
Sbjct: 900 HIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNG 959
Query: 834 NTDLEPHGKQIVGVANFHVS-----AHIDSSNH-KLTMLYKVEPGACDQSFGIHVAEFAN 862
V +HVS S +H +T LYK+ G C +SFG VA+ A
Sbjct: 960 FPG---------SVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQ 1009
BLAST of MS002101 vs. TAIR 10
Match:
AT4G02070.1 (MUTS homolog 6 )
HSP 1 Score: 199.1 bits (505), Expect = 1.6e-50
Identity = 171/604 (28.31%), Postives = 285/604 (47.19%), Query Frame = 0
Query: 289 NLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVK 348
N +M LD+AA+ L + E+ + + +L+ +N+ C GKRLL WL +PL + +
Sbjct: 691 NEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTE 750
Query: 349 EINSRLDLVQAFM-EDTALRQDLRQHLKRISDIERLTHYL-----EKRRAGLQHIVKLYQ 408
I R D V E+ + R+ L R+ D+ERL + R G + ++
Sbjct: 751 LIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDT 810
Query: 409 SSIRVPFIKNALENYE------GQFSSLIK-EKYLEFLEIWTDANHLNKFNNLV---ETA 468
+ +V + L E +++K + L + T L ++ + + A
Sbjct: 811 AKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDA 870
Query: 469 VDLDQLENGEYMI-----SSSYDPALSKLKNVQESIEQQILDLHRQVANDLDLPVDKALK 528
D + N +I YD A ++ + S+++ + + R++ D + +
Sbjct: 871 FDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKE-QRKLLGDASI---NYVT 930
Query: 529 LDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGV-KFTNTKLKKLGDQYQKIVEE 588
+ K E P+ H L + K GV ++ +KKL + + E
Sbjct: 931 VGKDEYL--------LEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSE 990
Query: 589 YKSFQKELVQRVIETASSFIEVFSPLAELLSELDVLLGFADLASSCPTPYTRPDI---TS 648
+S K + QR+I E + L +ELDVL+ A + S RP I TS
Sbjct: 991 KESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTS 1050
Query: 649 SDEGDIILEGSRHPCVEAQDW--VNFIPNDCKLVRG-KSWFQIITGPNMGGKSTFIRQVG 708
+ G HP + +F+PN+ K+ K+ F ++TGPNMGGKST +RQV
Sbjct: 1051 DGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVC 1110
Query: 709 VNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKS 768
+ +++AQ+G VP + +S D I R+GA D + G STF+ E+ ETA +L AT S
Sbjct: 1111 LAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNS 1170
Query: 769 LIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALARANTDLEPHGKQ 828
L+++DELGRGT+T DG +A ++ EH +E ++ F+TH+H R + D + + K
Sbjct: 1171 LVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYH------RLSVDYQTNPK- 1230
Query: 829 IVGVANFHVSAHID---SSNHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKA 862
V+ H++ I ++T LY++ PGAC +S+G++VA A P V+ A K+
Sbjct: 1231 ---VSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKS 1271
BLAST of MS002101 vs. TAIR 10
Match:
AT4G02070.2 (MUTS homolog 6 )
HSP 1 Score: 199.1 bits (505), Expect = 1.6e-50
Identity = 171/604 (28.31%), Postives = 285/604 (47.19%), Query Frame = 0
Query: 289 NLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVK 348
N +M LD+AA+ L + E+ + + +L+ +N+ C GKRLL WL +PL + +
Sbjct: 688 NEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTE 747
Query: 349 EINSRLDLVQAFM-EDTALRQDLRQHLKRISDIERLTHYL-----EKRRAGLQHIVKLYQ 408
I R D V E+ + R+ L R+ D+ERL + R G + ++
Sbjct: 748 LIKERQDAVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDT 807
Query: 409 SSIRVPFIKNALENYE------GQFSSLIK-EKYLEFLEIWTDANHLNKFNNLV---ETA 468
+ +V + L E +++K + L + T L ++ + + A
Sbjct: 808 AKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDA 867
Query: 469 VDLDQLENGEYMI-----SSSYDPALSKLKNVQESIEQQILDLHRQVANDLDLPVDKALK 528
D + N +I YD A ++ + S+++ + + R++ D + +
Sbjct: 868 FDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKE-QRKLLGDASI---NYVT 927
Query: 529 LDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGV-KFTNTKLKKLGDQYQKIVEE 588
+ K E P+ H L + K GV ++ +KKL + + E
Sbjct: 928 VGKDEYL--------LEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSE 987
Query: 589 YKSFQKELVQRVIETASSFIEVFSPLAELLSELDVLLGFADLASSCPTPYTRPDI---TS 648
+S K + QR+I E + L +ELDVL+ A + S RP I TS
Sbjct: 988 KESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTS 1047
Query: 649 SDEGDIILEGSRHPCVEAQDW--VNFIPNDCKLVRG-KSWFQIITGPNMGGKSTFIRQVG 708
+ G HP + +F+PN+ K+ K+ F ++TGPNMGGKST +RQV
Sbjct: 1048 DGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVC 1107
Query: 709 VNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKS 768
+ +++AQ+G VP + +S D I R+GA D + G STF+ E+ ETA +L AT S
Sbjct: 1108 LAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNS 1167
Query: 769 LIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALARANTDLEPHGKQ 828
L+++DELGRGT+T DG +A ++ EH +E ++ F+TH+H R + D + + K
Sbjct: 1168 LVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYH------RLSVDYQTNPK- 1227
Query: 829 IVGVANFHVSAHID---SSNHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKA 862
V+ H++ I ++T LY++ PGAC +S+G++VA A P V+ A K+
Sbjct: 1228 ---VSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKS 1268
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134936.1 | 0.0e+00 | 99.68 | DNA mismatch repair protein MSH2 isoform X1 [Momordica charantia] | [more] |
XP_022134937.1 | 0.0e+00 | 98.52 | DNA mismatch repair protein MSH2 isoform X2 [Momordica charantia] | [more] |
XP_023516636.1 | 0.0e+00 | 94.71 | DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo] | [more] |
XP_038890004.1 | 0.0e+00 | 94.82 | DNA mismatch repair protein MSH2 [Benincasa hispida] | [more] |
KAG7023250.1 | 0.0e+00 | 94.40 | DNA mismatch repair protein MSH2 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
O24617 | 0.0e+00 | 73.68 | DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV... | [more] |
Q9XGC9 | 0.0e+00 | 68.72 | DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1 | [more] |
Q5XXB5 | 3.1e-205 | 42.92 | DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV... | [more] |
P43247 | 7.7e-204 | 42.27 | DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1 | [more] |
Q3MHE4 | 1.3e-203 | 42.49 | DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BZ63 | 0.0e+00 | 99.68 | DNA mismatch repair protein MSH2 isoform X1 OS=Momordica charantia OX=3673 GN=LO... | [more] |
A0A6J1C185 | 0.0e+00 | 98.52 | DNA mismatch repair protein MSH2 isoform X2 OS=Momordica charantia OX=3673 GN=LO... | [more] |
A0A6J1E222 | 0.0e+00 | 94.40 | DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 P... | [more] |
A0A6J1JGF9 | 0.0e+00 | 93.76 | DNA mismatch repair protein MSH2 OS=Cucurbita maxima OX=3661 GN=LOC111484889 PE=... | [more] |
A0A5D3DX26 | 0.0e+00 | 94.40 | DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946... | [more] |