MS002083 (gene) Bitter gourd (TR) v1

Overview


Name	MS002083
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor 11-like
Location	scaffold30: 2271572 .. 2272135 (+)
RNA-Seq Expression	MS002083
Synteny	MS002083

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCACACAGAGCTCCAAATCTTCACCTGATCAACTCCCAATAACTGAGCATCATGTTCGAAGAAGGTTTCTGGGAGTGAGACAGCGCCCCTCTGGAAGATGGGTCGCAGAAATCAAAGTCTCATCACAGAAGCTGAGGCTGTGGCTTGGCACTTTCGACCGAGCAGAAGATGCTGCCATGGCCTATGACAGAGCCGCAAGGCTCCTCAGAGGAACAAACGCAAAGACAAACTTCCCATATGACCATCATGTTCATGGCAGCTTCTCCAATTCTTCCACCATTTTTGGACACAGTCCCAAGCTCTACCGCCTGCTTCAGCTCGCCATCATGAAGAACAGGAACAGCCGTCCGAGATCAACGGCTGATGATCATCTGCAGCAGCAGCCATCAAGATCAATTGGGTTTACTGACTCGGTTGTTGAGGACACTATTTTCTGTTCTTCAACGAATAGTCATTTGTCTTGTGAAAATTATAGAGGATGTGGGTTCTCGTTTGGGGGTTCAAAAGTTTATACTTCTGTGTTTGTGGCTCCTTCTTTTAGCTCTGATGATGTGAGA

mRNA sequence

ATGGCCGCCACACAGAGCTCCAAATCTTCACCTGATCAACTCCCAATAACTGAGCATCATGTTCGAAGAAGGTTTCTGGGAGTGAGACAGCGCCCCTCTGGAAGATGGGTCGCAGAAATCAAAGTCTCATCACAGAAGCTGAGGCTGTGGCTTGGCACTTTCGACCGAGCAGAAGATGCTGCCATGGCCTATGACAGAGCCGCAAGGCTCCTCAGAGGAACAAACGCAAAGACAAACTTCCCATATGACCATCATGTTCATGGCAGCTTCTCCAATTCTTCCACCATTTTTGGACACAGTCCCAAGCTCTACCGCCTGCTTCAGCTCGCCATCATGAAGAACAGGAACAGCCGTCCGAGATCAACGGCTGATGATCATCTGCAGCAGCAGCCATCAAGATCAATTGGGTTTACTGACTCGGTTGTTGAGGACACTATTTTCTGTTCTTCAACGAATAGTCATTTGTCTTGTGAAAATTATAGAGGATGTGGGTTCTCGTTTGGGGGTTCAAAAGTTTATACTTCTGTGTTTGTGGCTCCTTCTTTTAGCTCTGATGATGTGAGA

Coding sequence (CDS)

ATGGCCGCCACACAGAGCTCCAAATCTTCACCTGATCAACTCCCAATAACTGAGCATCATGTTCGAAGAAGGTTTCTGGGAGTGAGACAGCGCCCCTCTGGAAGATGGGTCGCAGAAATCAAAGTCTCATCACAGAAGCTGAGGCTGTGGCTTGGCACTTTCGACCGAGCAGAAGATGCTGCCATGGCCTATGACAGAGCCGCAAGGCTCCTCAGAGGAACAAACGCAAAGACAAACTTCCCATATGACCATCATGTTCATGGCAGCTTCTCCAATTCTTCCACCATTTTTGGACACAGTCCCAAGCTCTACCGCCTGCTTCAGCTCGCCATCATGAAGAACAGGAACAGCCGTCCGAGATCAACGGCTGATGATCATCTGCAGCAGCAGCCATCAAGATCAATTGGGTTTACTGACTCGGTTGTTGAGGACACTATTTTCTGTTCTTCAACGAATAGTCATTTGTCTTGTGAAAATTATAGAGGATGTGGGTTCTCGTTTGGGGGTTCAAAAGTTTATACTTCTGTGTTTGTGGCTCCTTCTTTTAGCTCTGATGATGTGAGA

Protein sequence

MAATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPRSTADDHLQQQPSRSIGFTDSVVEDTIFCSSTNSHLSCENYRGCGFSFGGSKVYTSVFVAPSFSSDDVR

Homology

[Close]

BLAST of MS002083 vs. NCBI nr
Match: XP_022134768.1 (ethylene-responsive transcription factor 11-like [Momordica charantia])

HSP 1 Score: 375.2 bits (962), Expect = 3.4e-100
Identity = 185/188 (98.40%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MAATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDA 60
           MAATQSSKSSPDQLPITEHH RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDA
Sbjct: 1   MAATQSSKSSPDQLPITEHHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDA 60

Query: 61  AMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPR 120
           AMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPR
Sbjct: 61  AMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPR 120

Query: 121 STADDHLQQQPSRSIGFTDSVVEDTIFCSSTNSHLSCENYRGCGFSFGGSKVYTSVFVAP 180
           STADDHLQQQPSRSIGFTDSVVEDTIFCSSTN+H SCENYRGCGFSFGGSKVYTSVFVAP
Sbjct: 121 STADDHLQQQPSRSIGFTDSVVEDTIFCSSTNNHSSCENYRGCGFSFGGSKVYTSVFVAP 180

Query: 181 SFSSDDVR 189
           SFSSDDVR
Sbjct: 181 SFSSDDVR 188

[Close]

BLAST of MS002083 vs. NCBI nr
Match: XP_038878811.1 (ethylene-responsive transcription factor ERN1-like [Benincasa hispida])

HSP 1 Score: 240.7 bits (613), Expect = 9.9e-60
Identity = 143/207 (69.08%), Postives = 156/207 (75.36%), Query Frame = 0


Query: 1   MAATQSSK-SSPDQLPITE-------HHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLG 60
           MAATQSS  SS    P+         +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLG
Sbjct: 1   MAATQSSNPSSQPPNPLNSNPNNQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLG 60

Query: 61  TFDRAEDAAMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSS-------TIFGHSPKLYR 120
           TF+RAEDAAMAYDRAARLLRG +AKTNFPYD H HG F++S+       ++FGHSPKL R
Sbjct: 61  TFNRAEDAAMAYDRAARLLRGRSAKTNFPYDDHDHGFFNSSTINEEQSRSLFGHSPKLCR 120

Query: 121 LLQLAIMKNRNSRPRSTADDHLQQQPSRSIGFTDSVVEDTIFCSSTN-------SHLSCE 180
           LLQ AIMKNR SR RSTAD   QQQ +R+ G  DSVVEDTIFCSSTN       ++  C 
Sbjct: 121 LLQHAIMKNR-SRLRSTAD--YQQQITRNNGLIDSVVEDTIFCSSTNLVENKNDNNKGC- 180

Query: 181 NYRGCGFSFGGSKVYTSVFVAPSFSSD 186
              GCGFSFGGSKVYTSVFVAPSFSSD
Sbjct: 181 ---GCGFSFGGSKVYTSVFVAPSFSSD 200

[Close]

BLAST of MS002083 vs. NCBI nr
Match: XP_031737158.1 (ethylene-responsive transcription factor ERN2 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 2.5e-55
Identity = 135/200 (67.50%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAAM
Sbjct: 2   ATNSSSLPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAM 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+H HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYH-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADD-------HLQQQPSRSIGFTDSVVEDTIFCSST----NSHLSCENYRGCGF 182
           SR  ST D        H QQQ SR+ G  DSVVEDTIFCSST    N++ S     GCGF
Sbjct: 122 SRLISTTDHQYHHRRRHQQQQISRNNGGIDSVVEDTIFCSSTNLVENNNNSSNKGCGCGF 181

Query: 183 SFGGSKVYTSVFVAPSFSSD 186
           SFGGSKVYTSVFVAPSFSSD
Sbjct: 182 SFGGSKVYTSVFVAPSFSSD 196

[Close]

BLAST of MS002083 vs. NCBI nr
Match: XP_016901366.1 (PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo] >KAA0058038.1 ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 132/204 (64.71%), Postives = 146/204 (71.57%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+
Sbjct: 2   ATNSSSQPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAL 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+  HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYD-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADDHL------QQQPSRSIGFTDSVVEDTIFCSSTNSHLSCENYR--------- 182
           SR  ST D         QQQ SR+ G  DSVVEDTIFCSSTN   +  N           
Sbjct: 122 SRLISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNSNKGC 181

Query: 183 GCGFSFGGSKVYTSVFVAPSFSSD 186
           GCGFSFGGSKVYTSVFVAPSFSSD
Sbjct: 182 GCGFSFGGSKVYTSVFVAPSFSSD 200

[Close]

BLAST of MS002083 vs. NCBI nr
Match: TYK11541.1 (ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 215.7 bits (548), Expect = 3.4e-52
Identity = 131/208 (62.98%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+
Sbjct: 2   ATNSSSQPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAL 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+  HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYD-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADDHL------QQQPSRSIGFTDSVVEDTIFCSST-------------NSHLSC 182
           SR  ST D         QQQ SR+ G  DSVVEDTIFCSST             N++ + 
Sbjct: 122 SRLISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNNNSNS 181

Query: 183 ENYRGCGFSFGGSKVYTSVFVAPSFSSD 186
               GCGFSFGGSKVYTSVFVAPSFSSD
Sbjct: 182 NKGCGCGFSFGGSKVYTSVFVAPSFSSD 204

[Close]

BLAST of MS002083 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18
Identity = 41/57 (71.93%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 24 RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNF 81
          +F+GVRQRPSGRWVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG+N +TNF
Sbjct: 34 KFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 90

[Close]

BLAST of MS002083 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18
Identity = 41/57 (71.93%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 24 RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNF 81
          +F+GVRQRPSGRWVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG+N +TNF
Sbjct: 38 KFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 94

[Close]

BLAST of MS002083 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-17
Identity = 40/59 (67.80%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 22 RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNF 81
          + +F+GVRQRPSG+WVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG+N +TNF
Sbjct: 19 KTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 77

[Close]

BLAST of MS002083 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16
Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 4  TQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 63
          T SSKS   Q    +  V  RFLGVR+RP GR+ AEI+  + K R WLGTFD AE+AA+A
Sbjct: 3  TTSSKSKKKQ----DDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALA 62

Query: 64 YDRAARLLRGTNAKTNFPY 83
          YDRAAR +RGT A+TNF Y
Sbjct: 63 YDRAARSMRGTRARTNFVY 77

[Close]

BLAST of MS002083 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-16
Identity = 45/78 (57.69%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 24  RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNFPYD 83
           RF GVR+RP GR+ AEI+   +K R+WLGTFD AEDAA AYD AAR LRG  AKTNFP  
Sbjct: 27  RFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLP 86

Query: 84  HHVHGSFSNSSTIFGHSP 102
           +  H  F+      GH+P
Sbjct: 87  YAHHHQFNQ-----GHNP 99

[Close]

BLAST of MS002083 vs. ExPASy TrEMBL
Match: A0A6J1C2Y6 (ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 GN=LOC111006959 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.6e-100
Identity = 185/188 (98.40%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MAATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDA 60
           MAATQSSKSSPDQLPITEHH RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDA
Sbjct: 1   MAATQSSKSSPDQLPITEHHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDA 60

Query: 61  AMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPR 120
           AMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPR
Sbjct: 61  AMAYDRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPKLYRLLQLAIMKNRNSRPR 120

Query: 121 STADDHLQQQPSRSIGFTDSVVEDTIFCSSTNSHLSCENYRGCGFSFGGSKVYTSVFVAP 180
           STADDHLQQQPSRSIGFTDSVVEDTIFCSSTN+H SCENYRGCGFSFGGSKVYTSVFVAP
Sbjct: 121 STADDHLQQQPSRSIGFTDSVVEDTIFCSSTNNHSSCENYRGCGFSFGGSKVYTSVFVAP 180

Query: 181 SFSSDDVR 189
           SFSSDDVR
Sbjct: 181 SFSSDDVR 188

[Close]

BLAST of MS002083 vs. ExPASy TrEMBL
Match: A0A0A0LPP4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 135/200 (67.50%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAAM
Sbjct: 2   ATNSSSLPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAM 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+H HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYH-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADD-------HLQQQPSRSIGFTDSVVEDTIFCSST----NSHLSCENYRGCGF 182
           SR  ST D        H QQQ SR+ G  DSVVEDTIFCSST    N++ S     GCGF
Sbjct: 122 SRLISTTDHQYHHRRRHQQQQISRNNGGIDSVVEDTIFCSSTNLVENNNNSSNKGCGCGF 181

Query: 183 SFGGSKVYTSVFVAPSFSSD 186
           SFGGSKVYTSVFVAPSFSSD
Sbjct: 182 SFGGSKVYTSVFVAPSFSSD 196

[Close]

BLAST of MS002083 vs. ExPASy TrEMBL
Match: A0A5A7USB5 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003430 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.7e-53
Identity = 132/204 (64.71%), Postives = 146/204 (71.57%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+
Sbjct: 2   ATNSSSQPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAL 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+  HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYD-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADDHL------QQQPSRSIGFTDSVVEDTIFCSSTNSHLSCENYR--------- 182
           SR  ST D         QQQ SR+ G  DSVVEDTIFCSSTN   +  N           
Sbjct: 122 SRLISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNSNKGC 181

Query: 183 GCGFSFGGSKVYTSVFVAPSFSSD 186
           GCGFSFGGSKVYTSVFVAPSFSSD
Sbjct: 182 GCGFSFGGSKVYTSVFVAPSFSSD 200

[Close]

BLAST of MS002083 vs. ExPASy TrEMBL
Match: A0A1S4DZE7 (ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494092 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.7e-53
Identity = 132/204 (64.71%), Postives = 146/204 (71.57%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+
Sbjct: 2   ATNSSSQPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAL 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+  HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYD-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADDHL------QQQPSRSIGFTDSVVEDTIFCSSTNSHLSCENYR--------- 182
           SR  ST D         QQQ SR+ G  DSVVEDTIFCSSTN   +  N           
Sbjct: 122 SRLISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNSNKGC 181

Query: 183 GCGFSFGGSKVYTSVFVAPSFSSD 186
           GCGFSFGGSKVYTSVFVAPSFSSD
Sbjct: 182 GCGFSFGGSKVYTSVFVAPSFSSD 200

[Close]

BLAST of MS002083 vs. ExPASy TrEMBL
Match: A0A5D3CI83 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37291G00010 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-52
Identity = 131/208 (62.98%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 3   ATQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAM 62
           AT SS   P+Q     +H RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+
Sbjct: 2   ATNSSSQPPNQ---EINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAL 61

Query: 63  AYDRAARLLRGTNAKTNFPYDHHVHGSFSN------SSTIFGHSPKLYRLLQLAIMKNRN 122
           AYDRAARLLRG +AKTNF YD+  HG F++      + ++F HSPKL RLLQ A+MKNR 
Sbjct: 62  AYDRAARLLRGRSAKTNFSYDYD-HGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNR- 121

Query: 123 SRPRSTADDHL------QQQPSRSIGFTDSVVEDTIFCSST-------------NSHLSC 182
           SR  ST D         QQQ SR+ G  DSVVEDTIFCSST             N++ + 
Sbjct: 122 SRLISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNNNSNS 181

Query: 183 ENYRGCGFSFGGSKVYTSVFVAPSFSSD 186
               GCGFSFGGSKVYTSVFVAPSFSSD
Sbjct: 182 NKGCGCGFSFGGSKVYTSVFVAPSFSSD 204

[Close]

BLAST of MS002083 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 40/59 (67.80%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 22 RRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNF 81
          + +F+GVRQRPSG+WVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG+N +TNF
Sbjct: 19 KTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 77

[Close]

BLAST of MS002083 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17
Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 4  TQSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 63
          T SSKS   Q    +  V  RFLGVR+RP GR+ AEI+  + K R WLGTFD AE+AA+A
Sbjct: 3  TTSSKSKKKQ----DDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALA 62

Query: 64 YDRAARLLRGTNAKTNFPY 83
          YDRAAR +RGT A+TNF Y
Sbjct: 63 YDRAARSMRGTRARTNFVY 77

[Close]

BLAST of MS002083 vs. TAIR 10
Match: AT4G39780.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 8.5e-17
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 6   SSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYD 65
           S   +P  +P+     ++ + GVRQR  G+WVAEI++   + RLWLGTFD AE+AAMAYD
Sbjct: 74  SPNLAPKPVPMKNMTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYD 133

Query: 66  RAARLLRGTNAKTNFPYDHHVHGSFSNSS 95
            AA  LRG  A+ NFP   H  G +   S
Sbjct: 134 LAAYKLRGEFARLNFPQFRHEDGYYGGGS 162

[Close]

BLAST of MS002083 vs. TAIR 10
Match: AT4G11140.1 (cytokinin response factor 1 )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 14  LPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRG 73
           +P+      R+F GVRQRP G+W AEI+  S+++R+WLGTFD AE+AA+ YD AA  LRG
Sbjct: 76  VPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRG 135

Query: 74  TNAKTNFP 82
            NA+ NFP
Sbjct: 136 PNAELNFP 143

[Close]

BLAST of MS002083 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 5   QSSKSSPDQLPITEHHVRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 64
           +S +  PDQ    +   RR + GVRQRP G+W AEI+   +  R+WLGTF+ AE+AA+AY
Sbjct: 23  KSDQHQPDQ----DQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAY 82

Query: 65  DRAARLLRGTNAKTNFPYDHHVHGSFSNSSTIFGHSPK 103
           DRAA   +GT AK NFP    V G    ++T   H+P+
Sbjct: 83  DRAALKFKGTKAKLNFP--ERVQG--PTTTTTISHAPR 112

The following BLAST results are available for this feature:

BLAST of MS002083 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134768.1	3.4e-100	98.40	ethylene-responsive transcription factor 11-like [Momordica charantia]	[more]
XP_038878811.1	9.9e-60	69.08	ethylene-responsive transcription factor ERN1-like [Benincasa hispida]	[more]
XP_031737158.1	2.5e-55	67.50	ethylene-responsive transcription factor ERN2 [Cucumis sativus]	[more]
XP_016901366.1	1.2e-52	64.71	PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucu...	[more]
TYK11541.1	3.4e-52	62.98	ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo va...	[more]

BLAST of MS002083 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1X9PY88	7.5e-18	71.93	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
A2Q5W1	7.5e-18	71.93	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
Q6J9S1	1.7e-17	67.80	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
Q9M644	1.4e-16	59.49	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SXS8	3.1e-16	57.69	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]

BLAST of MS002083 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2Y6	1.6e-100	98.40	ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LPP4	1.2e-55	67.50	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=...	[more]
A0A5A7USB5	5.7e-53	64.71	Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A1S4DZE7	5.7e-53	64.71	ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A5D3CI83	1.7e-52	62.98	Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]

BLAST of MS002083 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	1.2e-18	67.80	related to AP2 11	[more]
AT5G13910.1	1.0e-17	59.49	Integrase-type DNA-binding superfamily protein	[more]
AT4G39780.1	8.5e-17	47.19	Integrase-type DNA-binding superfamily protein	[more]
AT4G11140.1	1.1e-16	55.88	cytokinin response factor 1	[more]
AT5G13330.1	1.4e-16	45.92	related to AP2 6l	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 25..36 score: 52.42 coord: 47..63 score: 61.93
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 e-value: 1.6E-32 score: 124.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..73 e-value: 6.9E-11 score: 42.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 24..81 score: 19.07156
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..83 e-value: 2.44933E-30 score: 103.891
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 23..83 e-value: 1.5E-23 score: 84.7
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 7..185
None	No IPR available	PANTHER	PTHR31194:SF82	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE	coord: 7..185
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 25..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002083.1	MS002083.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity